Rh5DG129400

Glutamate-gated receptor that probably acts as non- selective cation channel

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
Physical Location & Seq
Forward (+)
12407695 .. 12421573
13879 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5DG129400.1

Sequence Viewer

Length: 1743 bp
ATGGAGATTGCAGCTGAAAACTTCAACAACCATTCAAAGAATCATAAGATAATCATTCATTTTCTAGATTCCAATAGAGACCCCTTGCTTGCTGCTCTTTCTGCTGAAGAATTGATAAAGGAAAAGAAGGCAAAACTGCTAATGGGCATGGAGACTTGGCAGGAAGCAGCTCTAGTAGCTGATGTGGGAAATCGAGCTCAAATTCCAGTGATTTCATTTGCGGCACCAACTATAACCACCCCTCTAATGCAACGCCGCTGGCCATTTTTGATACGAATGTCAAGCGATGGTGCTGCTCAAATGAAATGCATTGCAGACATTGTTTCTGCATACAATTGGAAAAGGGTTGTGGTGATATACGAAGATGATGGTTACGGTGGTGATGTTGGGACACTAGCTCTTTTGTCCGAGGCTCTTCAAGATGTTGGTTCAAAGATTGAGCATCGTTTGGTTCTCCCTCAGGTTTCTTCTGAGTTTAATCCTAATTGGGTTGAACTAGAAGAGCTGTTGAAGCTTCCCACCTTTCAATCCCGGGTGTTCATTGTGCTTCAGTCATCTTTACCAACTGTGACTAATCTATTCAGGGTGGCAAAGAAGATGGGACTTGTAGGAAGAGACTCAGCTTGGATAATCACAGAGAGTATAACTATTGCTAGTTTGCTTGACCTTCAAGTCAATCATGATATGAAAGGTATTTTGGGAATCAAGACCTACTATGCCATTAATACTAGTTCCTATGTCAAGTTCAACAACGCATTCCAAAAAAAGTATCCAGAAAAAGATAACTGCAGGCCAGACATTTATGCTCTTCGAGCATATGATCATACTAGAATTGTAATACAGGCCATAAGAATGAGTAATAACAGTGCTACTAACATTCAGGTTGTGTTAAGCACAGTGCTAAGAAATTATCAGGGTTTAAGTGGGAAAATTCACATTGAAGGAGGTGAAGTTTTGTACTCTCCCATATTCAGGATCGTAAACATTTTGGAAGGGAACAGATACAAAGAGTTGAACTTTTGGAGACCAGAGGTTGGGTTCTCAGAAAGCCTTTCAAAAGAAACAAGCAAAAACAGAAGTGATGATGGTGGTGCAGTAGTTTGGCCCGGGAATCTGAGTCAACAAGCTCCCAAAGGCTGGGCAATGCCTACTGCTGATAAGCCAATGATAATTGGGGTTCCTAATGCTTCCTTCCCCGAATTTGTAAGGGTTGATTCAGGTTCAAAGGCTAACGGTTTCAGCATTGAAATTTTCCACAAGGTGCGAAGTCGTTTGAATTATACTCTGCATTATGAATTTCGGGCCTTTAATGGCTTGTATGATGATCTAGTAGATCAAGTCCATAACAAGATATTTCAGAAAGGCTCTCCAATTGCCTGGGATTTCACCAAGGCCATTCTAGAGTTATTGGAGGATGGAGAAGTGAAGTCACTTGAAGATACTTGGTTGACTCCGAATCCTGAGTGTCCAAACAATTCAACTTCCGATGGACCAGAAAGCTTGAACGTCAAGAATTTTATGGGCCTTTATGTAATATCTGTTGCCACTTCCACCATTTGCTTTCTATCATCTCTCATTATCCTGCTGAAGAAGTTTCACCGATACCAGGAAGCATACCGAGGCAATGCAAGTGATGAAAGTGTTTGGAACAGAACAGTTAGAATGGCAAGATTCTCAAATTCCAACAGCAGGTTCACAATTTCCACAACTTCTAATCTACACCACAGTAAAGCCGGTAAATAA

Protein Analysis

580

Amino Acids

65.26

Weight (kDa)

8.4

Isoelectric Point (pI)

38.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ANF_receptor PF01094 1 - 319 1.3e-37 Receptor family ligand binding region
Peripla_BP_6 PF13458 2 - 295 2.9e-18 Periplasmic binding protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000350)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04591 FvH4_1g04600 FvH4_3g08210 FvH4_3g08210 FvH4_3g08211 FvH4_3g32960 FvH4_3g32961 FvH4_5g21700 FvH4_6g22211
malus_domestica MD05G1305700.v1.1 MD05G1305800.v1.1 MD05G1305900.v1.1 MD05G1306400.v1.1
prunus_persica Prupe.4G056200_v2.0.a1 Prupe.4G056200_v2.0.a1 Prupe.4G056600_v2.0.a1 Prupe.4G056600_v2.0.a1
pyrus_communis pycom05g28300 pycom05g28310 pycom05g28350 pycom10g23860
rosa_chinensis RchiOBHm_Chr5g0009861 RchiOBHm_Chr5g0009881 RchiOBHm_Chr5g0009931 RchiOBHm_Chr5g0009951 RchiOBHm_Chr5g0009981 RchiOBHm_Chr5g0055531 RchiOBHm_Chr5g0055541
rosa_laevigata RLG00000015779 RLG00000031705 RLG00000031706 RLG00000031711 RLG00000031713 RLG00000031715 RLG00000031716 RLG00000034996
rosa_multiflora Rmu_co8083594.1_g000001 Rmu_co8206032.1_g000001 Rmu_co8356045.1_g000001 Rmu_sc0000773.1_g000002 Rmu_sc0001709.1_g000001 Rmu_sc0001709.1_g000007 Rmu_sc0001709.1_g000012 Rmu_sc0001709.1_g000013 Rmu_sc0001709.1_g000018 Rmu_sc0001709.1_g000019 Rmu_sc0002275.1_g000004 Rmu_sc0003071.1_g000002 Rmu_sc0003071.1_g000003 Rmu_sc0003630.1_g000014 Rmu_sc0003630.1_g000017 Rmu_sc0003630.1_g000043 Rmu_sc0003630.1_g000044 Rmu_sc0004626.1_g000007
rosa_roxburghii Rroxscaffold_1G00024770 Rroxscaffold_1G00066180 Rroxscaffold_1G00066200 Rroxscaffold_1G00066210 Rroxscaffold_1G00066240 Rroxscaffold_1G00066250 Rroxscaffold_1G00066320 Rroxscaffold_1G00066340 Rroxscaffold_3G00234120
rosa_rugosa Rorug04G0446400 Rorug04G0446500 Rorug04G0446600 Rorug04G0447000 Rorug04G0447100 Rorug04G0447200 Rorug04G0447300 Rorug04G0447900 Rorug04G0448200
rosa_samantha Rh2CG021600 Rh2DG021300 Rh4AG195700 Rh4BG194700 Rh5AG077900 Rh5AG078100 Rh5AG078600 Rh5AG078700 Rh5AG078900 Rh5AG079000 Rh5AG079100 Rh5AG363100 Rh5CG085300 Rh5CG085900 Rh5CG086000 Rh5CG086200 Rh5CG086400 Rh5CG086500 Rh5CG397300 Rh5DG073400 Rh5DG074000 Rh5DG074100 Rh5DG074300 Rh5DG074500 Rh5DG074600 Rh5DG129000 Rh5DG129400 Rh5DG388500
rosa_wichuraiana Rw2G001690 Rw5G007180 Rw5G007190 Rw5G007230 Rw5G007240 Rw5G007250 Rw5G007320 Rw5G034180

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 671
Acc36I ACCTGC 1 cut(s) 1680
AccB1I GGYRCC 1 cut(s) 223
AccB7I CCANNNNNTGG 2 cut(s) 1034, 1137
AciI CCGC 2 cut(s) 221, 256
AclWI GGATC 1 cut(s) 983
AcoI YGGCCR 1 cut(s) 260
AcsI RAATTY 7 cut(s) 201, 930, 1199, 1248, 1295, 1513, 1678
AcuI CTGAAG 3 cut(s) 126, 533, 1607
AdeI CACNNNGTG 1 cut(s) 1261
AfaI GTAC 1 cut(s) 959
AfiI CCNNNNNNNGG 5 cut(s) 972, 1034, 1137, 1606, 1689
AhlI ACTAGT 1 cut(s) 728
AjnI CCWGG 2 cut(s) 1376, 1605
AjuI GAANNNNNNNTTGG 4 cut(s) 680, 712, 1676, 1708
Alw21I GWGCWC 1 cut(s) 199
Alw26I GTCTC 4 cut(s) 72, 146, 609, 1018
AlwI GGATC 1 cut(s) 983
Ama87I CYCGRG 2 cut(s) 531, 1106
AoxI GGCC 7 cut(s) 260, 791, 843, 1103, 1302, 1392, 1522
ApeKI GCWGC 4 cut(s) 11, 92, 167, 293
ApoI RAATTY 7 cut(s) 201, 930, 1199, 1248, 1295, 1513, 1678
AseI ATTAAT 1 cut(s) 723
AspS9I GGNCC 4 cut(s) 1104, 1302, 1490, 1522
AsuC2I CCSGG 4 cut(s) 532, 533, 1107, 1108
AsuHPI GGTGA 5 cut(s) 364, 392, 959, 1378, 1589
AvaI CYCGRG 2 cut(s) 531, 1106
AvaII GGWCC 1 cut(s) 1490
AxyI CCTNAGG 1 cut(s) 459
BaeI ACNNNNGTAYC 2 cut(s) 263, 296
BalI TGGCCA 1 cut(s) 262
BanI GGYRCC 1 cut(s) 223
BanII GRGCYC 1 cut(s) 199
Bbv12I GWGCWC 1 cut(s) 199
BbvI GCAGC 4 cut(s) 23, 79, 179, 280
BccI CCATC 6 cut(s) 281, 362, 592, 1079, 1409, 1481
BcgI CGANNNNNNTGC 2 cut(s) 275, 309
BciT130I CCWGG 2 cut(s) 1378, 1607
BciVI GTATCC 1 cut(s) 780
BclI TGATCA 1 cut(s) 820
BcnI CCSGG 4 cut(s) 532, 533, 1107, 1108
BcoDI GTCTC 4 cut(s) 72, 146, 609, 1018
BcuI ACTAGT 1 cut(s) 728
BfaI CTAG 9 cut(s) 65, 173, 395, 497, 654, 729, 828, 1328, 1400
BfmI CTRYAG 1 cut(s) 787
BfuAI ACCTGC 1 cut(s) 1680
BfuI GTATCC 1 cut(s) 780
BisI GCNGC 6 cut(s) 12, 93, 168, 222, 256, 294
BlsI GCNGC 6 cut(s) 13, 94, 169, 223, 257, 295
Bme1390I CCNGG 6 cut(s) 532, 533, 1107, 1108, 1378, 1607
Bme18I GGWCC 1 cut(s) 1490
BmeT110I CYCGRG 2 cut(s) 531, 1106
BmgT120I GGNCC 4 cut(s) 1104, 1302, 1490, 1522
BmiI GGNNCC 2 cut(s) 225, 1179
BmrFI CCNGG 6 cut(s) 532, 533, 1107, 1108, 1378, 1607
BmsI GCATC 1 cut(s) 451
BpuMI CCSGG 4 cut(s) 532, 533, 1107, 1108
BsaI GGTCTC 2 cut(s) 72, 1018
BsaJI CCNNGG 6 cut(s) 408, 531, 1106, 1377, 1389, 1618
BsaXI ACNNNNNCTCC 2 cut(s) 936, 966
Bsc4I CCNNNNNNNGG 5 cut(s) 972, 1034, 1137, 1606, 1689
Bse118I RCCGGY 1 cut(s) 1733
Bse1I ACTGG 1 cut(s) 206
Bse21I CCTNAGG 1 cut(s) 459
Bse3DI GCAATG 3 cut(s) 309, 1149, 1630
BseBI CCWGG 2 cut(s) 1378, 1607
BseDI CCNNGG 6 cut(s) 408, 531, 1106, 1377, 1389, 1618
BseGI GGATG 1 cut(s) 1420
BseLI CCNNNNNNNGG 5 cut(s) 972, 1034, 1137, 1606, 1689
BseMI GCAATG 3 cut(s) 309, 1149, 1630
BseMII CTCAG 6 cut(s) 462, 473, 633, 1056, 1106, 1452
BseNI ACTGG 1 cut(s) 206
BseXI GCAGC 4 cut(s) 23, 79, 179, 280
BseYI CCCAGC 1 cut(s) 1137
BsgI GTGCAG 1 cut(s) 1113
BshFI GGCC 7 cut(s) 262, 793, 845, 1105, 1304, 1394, 1524
BshNI GGYRCC 1 cut(s) 223
BsiHKAI GWGCWC 1 cut(s) 199
BsiHKCI CYCGRG 2 cut(s) 531, 1106
BsiSI CCGG 3 cut(s) 532, 1107, 1734
BslFI GGGAC 2 cut(s) 403, 615
BslI CCNNNNNNNGG 5 cut(s) 972, 1034, 1137, 1606, 1689
BsmAI GTCTC 4 cut(s) 72, 146, 609, 1018
BsmFI GGGAC 2 cut(s) 403, 615
BsmI GAATGC 1 cut(s) 755
BsnI GGCC 7 cut(s) 262, 793, 845, 1105, 1304, 1394, 1524
Bso31I GGTCTC 2 cut(s) 72, 1018
BsoBI CYCGRG 2 cut(s) 531, 1106
Bsp1286I GDGCHC 1 cut(s) 199
Bsp143I GATC 4 cut(s) 820, 975, 1324, 1333
BspACI CCGC 2 cut(s) 221, 256
BspANI GGCC 7 cut(s) 262, 793, 845, 1105, 1304, 1394, 1524
BspCNI CTCAG 6 cut(s) 463, 472, 632, 1055, 1107, 1453
BspHI TCATGA 1 cut(s) 679
BspLI GGNNCC 2 cut(s) 225, 1179
BspMAI CTGCAG 1 cut(s) 791
BspMI ACCTGC 1 cut(s) 1680
BspPI GGATC 1 cut(s) 983
BspQI GCTCTTC 3 cut(s) 420, 495, 813
BspT107I GGYRCC 1 cut(s) 223
BspTNI GGTCTC 2 cut(s) 72, 1018
BsrDI GCAATG 3 cut(s) 309, 1149, 1630
BsrFI RCCGGY 1 cut(s) 1733
BsrI ACTGG 1 cut(s) 206
BssAI RCCGGY 1 cut(s) 1733
BssECI CCNNGG 6 cut(s) 408, 531, 1106, 1377, 1389, 1618
BssMI GATC 4 cut(s) 820, 975, 1324, 1333
BssT1I CCWWGG 1 cut(s) 1389
Bst2UI CCWGG 2 cut(s) 1378, 1607
Bst4CI ACNGT 7 cut(s) 377, 568, 866, 898, 1235, 1657, 1727
Bst6I CTCTTC 4 cut(s) 420, 495, 607, 813
BstC8I GCNNGC 3 cut(s) 90, 260, 791
BstDEI CTNAG 7 cut(s) 459, 471, 619, 902, 1042, 1115, 1461
BstF5I GGATG 1 cut(s) 1420
BstKTI GATC 4 cut(s) 823, 978, 1327, 1336
BstMAI GTCTC 4 cut(s) 72, 146, 609, 1018
BstMBI GATC 4 cut(s) 820, 975, 1324, 1333
BstMWI GCNNNNNNNGC 4 cut(s) 101, 176, 511, 812
BstNI CCWGG 2 cut(s) 1378, 1607
BstSCI CCNGG 6 cut(s) 530, 531, 1105, 1106, 1376, 1605
BstSFI CTRYAG 1 cut(s) 787
BstV1I GCAGC 4 cut(s) 23, 79, 179, 280
BstXI CCANNNNNNTGG 1 cut(s) 1377
Bsu36I CCTNAGG 1 cut(s) 459
BsuI GTATCC 1 cut(s) 780
BsuRI GGCC 7 cut(s) 262, 793, 845, 1105, 1304, 1394, 1524
BtgZI GCGATG 1 cut(s) 300
BtsCI GGATG 1 cut(s) 1420
BtsIMutI CAGTG 3 cut(s) 213, 871, 903
BveI ACCTGC 1 cut(s) 1680
Cac8I GCNNGC 3 cut(s) 90, 260, 791
CciI TCATGA 1 cut(s) 679
Cfr10I RCCGGY 1 cut(s) 1733
Cfr13I GGNCC 4 cut(s) 1104, 1302, 1490, 1522
Cfr9I CCCGGG 2 cut(s) 531, 1106
Csp6I GTAC 1 cut(s) 958
CviAII CATG 2 cut(s) 148, 680
CviQI GTAC 1 cut(s) 958
DdeI CTNAG 7 cut(s) 459, 471, 619, 902, 1042, 1115, 1461
DpnI GATC 4 cut(s) 822, 977, 1326, 1335
DpnII GATC 4 cut(s) 820, 975, 1324, 1333
DraIII CACNNNGTG 1 cut(s) 1261
DrdI GACNNNNNNGTC 1 cut(s) 671
DseDI GACNNNNNNGTC 1 cut(s) 671
EaeI YGGCCR 1 cut(s) 260
Eam1104I CTCTTC 4 cut(s) 420, 495, 607, 813
EarI CTCTTC 4 cut(s) 420, 495, 607, 813
Ecl136II GAGCTC 1 cut(s) 197
Eco130I CCWWGG 1 cut(s) 1389
Eco24I GRGCYC 1 cut(s) 199
Eco31I GGTCTC 2 cut(s) 72, 1018
Eco47I GGWCC 1 cut(s) 1490
Eco53kI GAGCTC 1 cut(s) 197
Eco57I CTGAAG 3 cut(s) 126, 533, 1607
Eco81I CCTNAGG 1 cut(s) 459
Eco88I CYCGRG 2 cut(s) 531, 1106
EcoICRI GAGCTC 1 cut(s) 197
EcoRII CCWGG 2 cut(s) 1376, 1605
EcoT14I CCWWGG 1 cut(s) 1389
EcoT22I ATGCAT 1 cut(s) 311
EcoT38I GRGCYC 1 cut(s) 199
ErhI CCWWGG 1 cut(s) 1389
FaeI CATG 2 cut(s) 151, 683
FaqI GGGAC 2 cut(s) 403, 615
FatI CATG 2 cut(s) 147, 679
FauNDI CATATG 1 cut(s) 817
FbaI TGATCA 1 cut(s) 820
Fnu4HI GCNGC 6 cut(s) 12, 93, 168, 222, 256, 294
FokI GGATG 1 cut(s) 1427
FriOI GRGCYC 1 cut(s) 199
Fsp4HI GCNGC 6 cut(s) 12, 93, 168, 222, 256, 294
FspBI CTAG 9 cut(s) 65, 173, 395, 497, 654, 729, 828, 1328, 1400
GluI GCNGC 6 cut(s) 12, 93, 168, 222, 256, 294
GsaI CCCAGC 1 cut(s) 1141
HaeIII GGCC 7 cut(s) 262, 793, 845, 1105, 1304, 1394, 1524
HapII CCGG 3 cut(s) 532, 1107, 1734
Hin1II CATG 2 cut(s) 151, 683
HincII GTYRAC 2 cut(s) 1121, 1449
HindII GTYRAC 2 cut(s) 1121, 1449
HindIII AAGCTT 2 cut(s) 512, 1498
HpaII CCGG 3 cut(s) 532, 1107, 1734
HphI GGTGA 5 cut(s) 364, 392, 959, 1378, 1589
Hpy166II GTNNAC 4 cut(s) 982, 1121, 1449, 1695
Hpy188I TCNGA 7 cut(s) 409, 472, 1045, 1116, 1359, 1455, 1486
Hpy188III TCNNGA 9 cut(s) 65, 419, 680, 706, 773, 973, 1400, 1460, 1510
Hpy8I GTNNAC 4 cut(s) 982, 1121, 1449, 1695
HpyAV CCTTC 5 cut(s) 121, 677, 935, 986, 1201
HpyCH4III ACNGT 7 cut(s) 377, 568, 866, 898, 1235, 1657, 1727
HpyCH4IV ACGT 1 cut(s) 1506
HpyCH4V TGCA 9 cut(s) 11, 250, 309, 314, 329, 789, 1094, 1288, 1628
HpyF10VI GCNNNNNNNGC 4 cut(s) 101, 176, 511, 812
HpyF3I CTNAG 7 cut(s) 459, 471, 619, 902, 1042, 1115, 1461
HpySE526I ACGT 1 cut(s) 1506
Hsp92II CATG 2 cut(s) 151, 683
Ksp22I TGATCA 1 cut(s) 820
Kzo9I GATC 4 cut(s) 820, 975, 1324, 1333
LguI GCTCTTC 3 cut(s) 420, 495, 813
LmnI GCTCC 1 cut(s) 1132
Lsp1109I GCAGC 4 cut(s) 23, 79, 179, 280
LweI GCATC 1 cut(s) 451
MaeI CTAG 9 cut(s) 65, 173, 395, 497, 654, 729, 828, 1328, 1400
MaeII ACGT 1 cut(s) 1506
MaeIII GTNAC 3 cut(s) 371, 568, 1428
MalI GATC 4 cut(s) 822, 977, 1326, 1335
MboI GATC 4 cut(s) 820, 975, 1324, 1333
MfeI CAATTG 2 cut(s) 334, 1371
MhlI GDGCHC 1 cut(s) 199
MlsI TGGCCA 1 cut(s) 262
MluNI TGGCCA 1 cut(s) 262
MlyI GAGTC 3 cut(s) 611, 1126, 1444
MmeI TCCRAC 1 cut(s) 1707
MnlI CCTC 7 cut(s) 252, 403, 468, 938, 1024, 1405, 1613
Mox20I TGGCCA 1 cut(s) 262
Mph1103I ATGCAT 1 cut(s) 311
MscI TGGCCA 1 cut(s) 262
MseI TTAA 5 cut(s) 477, 723, 890, 920, 1308
MslI CAYNNNNRTG 1 cut(s) 851
Msp20I TGGCCA 1 cut(s) 262
MspA1I CMGCKG 2 cut(s) 14, 258
MspI CCGG 3 cut(s) 532, 1107, 1734
MspR9I CCNGG 6 cut(s) 532, 533, 1107, 1108, 1378, 1607
MunI CAATTG 2 cut(s) 334, 1371
Mva1269I GAATGC 1 cut(s) 755
MvaI CCWGG 2 cut(s) 1378, 1607
MwoI GCNNNNNNNGC 4 cut(s) 101, 176, 511, 812
NciI CCSGG 4 cut(s) 532, 533, 1107, 1108
NdeI CATATG 1 cut(s) 817
NdeII GATC 4 cut(s) 820, 975, 1324, 1333
NlaIII CATG 2 cut(s) 151, 683
NlaIV GGNNCC 2 cut(s) 225, 1179
NmuCI GTSAC 2 cut(s) 568, 1428
NsiI ATGCAT 1 cut(s) 311
PagI TCATGA 1 cut(s) 679
PciSI GCTCTTC 3 cut(s) 420, 495, 813
PctI GAATGC 1 cut(s) 755
PfeI GAWTC 7 cut(s) 40, 68, 702, 1111, 1214, 1456, 1671
PflMI CCANNNNNTGG 2 cut(s) 1034, 1137
PkrI GCNGC 6 cut(s) 13, 94, 169, 223, 257, 295
PleI GAGTC 3 cut(s) 611, 1125, 1444
PpsI GAGTC 3 cut(s) 611, 1125, 1444
PshBI ATTAAT 1 cut(s) 723
Psp124BI GAGCTC 1 cut(s) 199
Psp6I CCWGG 2 cut(s) 1376, 1605
PspFI CCCAGC 1 cut(s) 1137
PspGI CCWGG 2 cut(s) 1376, 1605
PspN4I GGNNCC 2 cut(s) 225, 1179
PspPI GGNCC 4 cut(s) 1104, 1302, 1490, 1522
PstI CTGCAG 1 cut(s) 791
PvuII CAGCTG 1 cut(s) 14
RsaI GTAC 1 cut(s) 959
RsaNI GTAC 1 cut(s) 958
RseI CAYNNNNRTG 1 cut(s) 851
SacI GAGCTC 1 cut(s) 199
SapI GCTCTTC 3 cut(s) 420, 495, 813
SaqAI TTAA 5 cut(s) 477, 723, 890, 920, 1308
SatI GCNGC 6 cut(s) 12, 93, 168, 222, 256, 294
Sau3AI GATC 4 cut(s) 820, 975, 1324, 1333
Sau96I GGNCC 4 cut(s) 1104, 1302, 1490, 1522
SchI GAGTC 3 cut(s) 611, 1126, 1444
ScrFI CCNGG 6 cut(s) 532, 533, 1107, 1108, 1378, 1607
SduI GDGCHC 1 cut(s) 199
SfaNI GCATC 1 cut(s) 451
SfcI CTRYAG 1 cut(s) 787
SinI GGWCC 1 cut(s) 1490
SmaI CCCGGG 2 cut(s) 533, 1108
SmiMI CAYNNNNRTG 1 cut(s) 851
SpeI ACTAGT 1 cut(s) 728
SsiI CCGC 2 cut(s) 221, 256
SspMI CTAG 9 cut(s) 65, 173, 395, 497, 654, 729, 828, 1328, 1400
SstI GAGCTC 1 cut(s) 199
StyD4I CCNGG 6 cut(s) 530, 531, 1105, 1106, 1376, 1605
StyI CCWWGG 1 cut(s) 1389
TaaI ACNGT 7 cut(s) 377, 568, 866, 898, 1235, 1657, 1727
TaiI ACGT 1 cut(s) 1509
TaqI TCGA 2 cut(s) 193, 811
TatI WGTACW 1 cut(s) 957
TauI GCSGC 2 cut(s) 224, 258
TfiI GAWTC 7 cut(s) 40, 68, 702, 1111, 1214, 1456, 1671
Tru1I TTAA 5 cut(s) 477, 723, 890, 920, 1308
Tru9I TTAA 5 cut(s) 477, 723, 890, 920, 1308
TscAI CASTG 3 cut(s) 213, 871, 903
TseFI GTSAC 2 cut(s) 568, 1428
TseI GCWGC 4 cut(s) 11, 92, 167, 293
Tsp45I GTSAC 2 cut(s) 568, 1428
TspDTI ATGAA 7 cut(s) 47, 204, 317, 529, 701, 1308, 1650
TspMI CCCGGG 2 cut(s) 531, 1106
TspRI CASTG 3 cut(s) 213, 871, 903
Van91I CCANNNNNTGG 2 cut(s) 1034, 1137
VpaK11BI GGWCC 1 cut(s) 1490
VspI ATTAAT 1 cut(s) 723
XapI RAATTY 7 cut(s) 201, 930, 1199, 1248, 1295, 1513, 1678
XbaI TCTAGA 2 cut(s) 64, 1399
XmaI CCCGGG 2 cut(s) 531, 1106
XspI CTAG 9 cut(s) 65, 173, 395, 497, 654, 729, 828, 1328, 1400
Zsp2I ATGCAT 1 cut(s) 311
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.