Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0003630.1

Orthogroup ID

OG0000350

Physical Location & Seq

Genomic Coordinates Reverse (-)

65864 .. 69121

Gene Structure 3258 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0003630.1_g000014.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2487 bp

atgaattctcctttcactactactgttagcaaagtccaaagactttggcatctgttttttctgttcaccatcatcacatactcctatggagttgaagctgaaaataagacaagcgtcactaatgttggagcgatcattagttttaattctcgtatcgggaaacaacagaaaactgccatggagattgcagctgaaaacttcaacaaccattcaaagaatcataagataatcattcattttctagattccaatagagaccccctgcttgctgctctttctgctgaagaattgataaaggaaaagaaggcaaaactgctaatgggcatggagacttggcaggaagcagctctagtagctgatgtgggaaatcgagctcaaattccagtgatttcatttgcggcaccaactataaccacccctctaatgcaacgccgctggccatttttgatacgaatgtcaagcgatggtgctgctcaaatgaaatgcattgcagacattgtttctgcatacaattggaaaagggttgtggtgatatacgaagatgatggttacggtggtgatgttgggacactagctcttttgtccgaggctcttcaagatgttggttcaaagattgagcatcgtttggttctccctcaggtttcttctgagtttaatcctaattgggttgaactagaagagctgttgaagcttcccacctttcaatcccgggtgttcattgtgcttcagtcatctttagcaactgtgactaatctattcagggtggcaaagaagatgggacttgtaggaagagactcagcttggataatcacagagagtataactattgctagtttgcttgaccttcaagtcaatcatgatatgaaaggtattttgggaatcaagacctactatgccattaatactagttcctatgtcaagttcaacaacgcattccaaaaaaagtatccagaagaagataactgcaggccagacatttatgctcttcgagcatatgatcatactagaattgtaatacaggccataagaatgagtaataacagtgctactaacattcaggttgtgttaagcacagtgctaagaaattatcagggtttaagtgggaaaattcacattgaaggaggtgaagtactgttgtactctcccatattcaggatcgtaaacattttggaagggaacagatacaaagagttgaacttttggagaccagaggttgggttctcagaaagcctttcaaaagaaacaagcaaaaacagaagtgatgatggtggtgcagtagtttggcccgggaatctgagtcaacaagctcccaaaggctgggcaatgcctactgctgataagccaatgataattggggttcctaatgcttccttccccgcatttgtaagggttgattcaggttcaaaggctaacgtactagctgaccgagtggacaaagtggacttcactcagccatatatggagtctggtttgtcaatgatagttccagaaaaatctgagcaaatagcttggctgtttatgaaacctctcacctggcaaatgtgggcggtgacatgtgccatcttagtctacacaatcttgatagtatggttcctggagcgcctgtccaatccagaatttaatggcacattgtggaatcaaatgggcacagcaacttggttcaccttcacctccttgttctttgctcacagagagaaaatcacaatctacttaactcgagtagtagtcatagtttggctgtttgttgtgttgatcctaacctcaagctacactgctaatttgtcatcaatgctcaccatccaacgattgaaaccaaatgtaacagacattgaaatgctgaagagaaccaactcaaaagtaggcttggatggggattcatttgtcacaaatttcttggtgaatgtacttcatttcgaccgaaataacatcatcaacgtaagcagtgaacccgaatacactgaggcattcgaaaacgaaagtatatctgctgcctttcttgaattcccatatgcaaaaatatttcagaaaggctctccaattgcctgggatttcaccaaggccattctagagttattggaggatggagaagtgaagtcacttgaagatacttggttgactccgaatcctgagtgtccaaacaattcaacttccgatggaccagaaagcttgaacgtcaagaattttatgggcctttatgtaatatctgttgccacttccaccatttgctttctatcatctctcattatcctgctgaagaagtttcaccgataccaggaagcataccgaggcaatgcaagtgatgaaagtgtttggaacagaacagttagaatggcaagattcgtatgtaatagagagctccatgttccaagcagcgctccaagttttgttgatgtgccggaattgacttctttccaacgggggcctgcgatcacttccaccactcaggagcatcatcttcagttatccaccctagctagcacaaactga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0004888 GO:0005215 GO:0005216 GO:0005261 GO:0005262 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0007154 GO:0007165 GO:0008066 GO:0008150 GO:0008324 GO:0009719 GO:0009987 GO:0010033 GO:0010243 GO:0015075 GO:0015085 GO:0015267 GO:0015318 GO:0016020 GO:0019722 GO:0019932 GO:0022803 GO:0022838 GO:0022857 GO:0022890 GO:0023052 GO:0030001 GO:0034220 GO:0035556 GO:0038023 GO:0042221 GO:0043200 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0046873 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055085 GO:0060089 GO:0065007 GO:0070588 GO:0070838 GO:0070887 GO:0071229 GO:0071230 GO:0071310 GO:0071417 GO:0071495 GO:0071944 GO:0072511 GO:0098655 GO:0098660 GO:0098662 GO:1901698 GO:1901699 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ANF_receptor Lig_chan SBP_bac_3

Protein Analysis

828

Amino Acids

93.28

Weight (kDa)

6.44

Isoelectric Point (pI)

35.12

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000350)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g04591 FvH4_1g04600 FvH4_3g08210 FvH4_3g08210 FvH4_3g08211 FvH4_3g32960 FvH4_3g32961 FvH4_5g21700 FvH4_6g22211
malus_domestica	MD05G1305700.v1.1 MD05G1305800.v1.1 MD05G1305900.v1.1 MD05G1306400.v1.1
prunus_persica	Prupe.4G056200_v2.0.a1 Prupe.4G056200_v2.0.a1 Prupe.4G056600_v2.0.a1 Prupe.4G056600_v2.0.a1
pyrus_communis	pycom05g28300 pycom05g28310 pycom05g28350 pycom10g23860
rosa_chinensis	RchiOBHm_Chr5g0009861 RchiOBHm_Chr5g0009881 RchiOBHm_Chr5g0009931 RchiOBHm_Chr5g0009951 RchiOBHm_Chr5g0009981 RchiOBHm_Chr5g0055531 RchiOBHm_Chr5g0055541
rosa_laevigata	RLG00000015779 RLG00000031705 RLG00000031706 RLG00000031711 RLG00000031713 RLG00000031715 RLG00000031716 RLG00000034996
rosa_multiflora	Rmu_co8083594.1_g000001 Rmu_co8206032.1_g000001 Rmu_co8356045.1_g000001 Rmu_sc0000773.1_g000002 Rmu_sc0001709.1_g000001 Rmu_sc0001709.1_g000007 Rmu_sc0001709.1_g000012 Rmu_sc0001709.1_g000013 Rmu_sc0001709.1_g000018 Rmu_sc0001709.1_g000019 Rmu_sc0002275.1_g000004 Rmu_sc0003071.1_g000002 Rmu_sc0003071.1_g000003 Rmu_sc0003630.1_g000014 Rmu_sc0003630.1_g000017 Rmu_sc0003630.1_g000043 Rmu_sc0003630.1_g000044 Rmu_sc0004626.1_g000007
rosa_roxburghii	Rroxscaffold_1G00024770 Rroxscaffold_1G00066180 Rroxscaffold_1G00066200 Rroxscaffold_1G00066210 Rroxscaffold_1G00066240 Rroxscaffold_1G00066250 Rroxscaffold_1G00066320 Rroxscaffold_1G00066340 Rroxscaffold_3G00234120
rosa_rugosa	Rorug04G0446400 Rorug04G0446500 Rorug04G0446600 Rorug04G0447000 Rorug04G0447100 Rorug04G0447200 Rorug04G0447300 Rorug04G0447900 Rorug04G0448200
rosa_samantha	Rh2CG021600 Rh2DG021300 Rh4AG195700 Rh4BG194700 Rh5AG077900 Rh5AG078100 Rh5AG078600 Rh5AG078700 Rh5AG078900 Rh5AG079000 Rh5AG079100 Rh5AG363100 Rh5CG085300 Rh5CG085900 Rh5CG086000 Rh5CG086200 Rh5CG086400 Rh5CG086500 Rh5CG397300 Rh5DG073400 Rh5DG074000 Rh5DG074100 Rh5DG074300 Rh5DG074500 Rh5DG074600 Rh5DG129000 Rh5DG129400 Rh5DG388500
rosa_wichuraiana	Rw2G001690 Rw5G007180 Rw5G007190 Rw5G007230 Rw5G007240 Rw5G007250 Rw5G007320 Rw5G034180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	848
AccB1I	GGYRCC	1 cut(s)	400
AccB7I	CCANNNNNTGG	2 cut(s)	1214, 1317
AccI	GTMKAC	1 cut(s)	1569
AciI	CCGC	4 cut(s)	398, 433, 1377, 1547
AclWI	GGATC	2 cut(s)	1163, 1747
AcoI	YGGCCR	1 cut(s)	437
AcsI	RAATTY	7 cut(s)	4, 378, 1107, 1616, 1888, 2000, 2179
AcuI	CTGAAG	5 cut(s)	303, 710, 1859, 2273, 2441
AdeI	CACNNNGTG	1 cut(s)	1632
AfaI	GTAC	4 cut(s)	1131, 1139, 1416, 1905
AfeI	AGCGCT	1 cut(s)	2374
AfiI	CCNNNNNNNGG	4 cut(s)	1152, 1214, 1317, 2272
AflIII	ACRYGT	1 cut(s)	1553
AhlI	ACTAGT	1 cut(s)	905
AjnI	CCWGG	4 cut(s)	1532, 1593, 2042, 2271
AjuI	GAANNNNNNNTTGG	2 cut(s)	857, 889
Alw21I	GWGCWC	2 cut(s)	376, 2358
Alw26I	GTCTC	4 cut(s)	249, 323, 786, 1198
AlwI	GGATC	2 cut(s)	1163, 1747
Ama87I	CYCGRG	3 cut(s)	708, 1286, 1716
Aor51HI	AGCGCT	1 cut(s)	2374
AoxI	GGCC	7 cut(s)	437, 968, 1020, 1283, 2058, 2188, 2420
ApeKI	GCWGC	6 cut(s)	188, 269, 344, 470, 1988, 2370
ApoI	RAATTY	7 cut(s)	4, 378, 1107, 1616, 1888, 2000, 2179
AseI	ATTAAT	1 cut(s)	900
AspLEI	GCGC	2 cut(s)	1602, 2375
AspS9I	GGNCC	4 cut(s)	1284, 2156, 2188, 2420
AsuC2I	CCSGG	4 cut(s)	709, 710, 1287, 1288
AsuII	TTCGAA	1 cut(s)	1968
AsuNHI	GCTAGC	1 cut(s)	2474
AvaI	CYCGRG	3 cut(s)	708, 1286, 1716
AvaII	GGWCC	1 cut(s)	2156
AxyI	CCTNAGG	1 cut(s)	636
BaeGI	GKGCMC	1 cut(s)	1649
BaeI	ACNNNNGTAYC	2 cut(s)	440, 473
BalI	TGGCCA	1 cut(s)	439
BanI	GGYRCC	1 cut(s)	400
BanII	GRGCYC	2 cut(s)	376, 2358
Bbv12I	GWGCWC	2 cut(s)	376, 2358
BbvI	GCAGC	6 cut(s)	200, 256, 356, 457, 1975, 2382
BcgI	CGANNNNNNTGC	2 cut(s)	452, 486
BciT130I	CCWGG	4 cut(s)	1534, 1595, 2044, 2273
BciVI	GTATCC	1 cut(s)	957
BclI	TGATCA	1 cut(s)	997
BcnI	CCSGG	4 cut(s)	709, 710, 1287, 1288
BcoDI	GTCTC	4 cut(s)	249, 323, 786, 1198
BcuI	ACTAGT	1 cut(s)	905
BfmI	CTRYAG	1 cut(s)	964
BfoI	RGCGCY	2 cut(s)	1603, 2376
BfuI	GTATCC	1 cut(s)	957
BisI	GCNGC	8 cut(s)	189, 270, 345, 399, 433, 471, 1989, 2371
BlsI	GCNGC	8 cut(s)	190, 271, 346, 400, 434, 472, 1990, 2372
BmcAI	AGTACT	1 cut(s)	1131
Bme1390I	CCNGG	8 cut(s)	709, 710, 1287, 1288, 1534, 1595, 2044, 2273
Bme18I	GGWCC	1 cut(s)	2156
BmeT110I	CYCGRG	3 cut(s)	708, 1286, 1716
BmgT120I	GGNCC	4 cut(s)	1284, 2156, 2188, 2420
BmiI	GGNNCC	4 cut(s)	402, 1359, 1592, 2421
BmrFI	CCNGG	8 cut(s)	709, 710, 1287, 1288, 1534, 1595, 2044, 2273
BmsI	GCATC	3 cut(s)	58, 628, 2458
BmtI	GCTAGC	1 cut(s)	2478
BoxI	GACNNNNGTC	1 cut(s)	113
BpmI	CTGGAG	1 cut(s)	1616
Bpu14I	TTCGAA	1 cut(s)	1968
BpuEI	CTTGAG	1 cut(s)	1747
BpuMI	CCSGG	4 cut(s)	709, 710, 1287, 1288
BsaI	GGTCTC	2 cut(s)	249, 1198
BsaJI	CCNNGG	7 cut(s)	177, 585, 708, 1286, 2043, 2055, 2284
BsaXI	ACNNNNNCTCC	4 cut(s)	1113, 1143, 1589, 1619
Bsc4I	CCNNNNNNNGG	4 cut(s)	1152, 1214, 1317, 2272
Bse1I	ACTGG	1 cut(s)	383
Bse21I	CCTNAGG	1 cut(s)	636
Bse3DI	GCAATG	3 cut(s)	486, 1329, 2296
BseBI	CCWGG	4 cut(s)	1534, 1595, 2044, 2273
BseDI	CCNNGG	7 cut(s)	177, 585, 708, 1286, 2043, 2055, 2284
BseGI	GGATG	3 cut(s)	1797, 1873, 2086
BseLI	CCNNNNNNNGG	4 cut(s)	1152, 1214, 1317, 2272
BseMI	GCAATG	3 cut(s)	486, 1329, 2296
BseNI	ACTGG	1 cut(s)	383
BseSI	GKGCMC	1 cut(s)	1649
BseXI	GCAGC	6 cut(s)	200, 256, 356, 457, 1975, 2382
BseYI	CCCAGC	1 cut(s)	1317
BsgI	GTGCAG	1 cut(s)	1293
Bsh1285I	CGRYCG	1 cut(s)	1918
BshFI	GGCC	7 cut(s)	439, 970, 1022, 1285, 2060, 2190, 2422
BshNI	GGYRCC	1 cut(s)	400
BsiEI	CGRYCG	1 cut(s)	1918
BsiHKAI	GWGCWC	2 cut(s)	376, 2358
BsiHKCI	CYCGRG	3 cut(s)	708, 1286, 1716
BsiSI	CCGG	3 cut(s)	709, 1287, 2396
BslFI	GGGAC	2 cut(s)	580, 792
BslI	CCNNNNNNNGG	4 cut(s)	1152, 1214, 1317, 2272
BsmAI	GTCTC	4 cut(s)	249, 323, 786, 1198
BsmFI	GGGAC	2 cut(s)	580, 792
BsmI	GAATGC	2 cut(s)	932, 1964
BsnI	GGCC	7 cut(s)	439, 970, 1022, 1285, 2060, 2190, 2422
Bso31I	GGTCTC	2 cut(s)	249, 1198
BsoBI	CYCGRG	3 cut(s)	708, 1286, 1716
Bsp119I	TTCGAA	1 cut(s)	1968
Bsp1286I	GDGCHC	3 cut(s)	376, 1649, 2358
Bsp143I	GATC	5 cut(s)	132, 997, 1155, 1752, 2427
Bsp19I	CCATGG	1 cut(s)	177
BspACI	CCGC	4 cut(s)	398, 433, 1377, 1547
BspANI	GGCC	7 cut(s)	439, 970, 1022, 1285, 2060, 2190, 2422
BspHI	TCATGA	1 cut(s)	856
BspLI	GGNNCC	4 cut(s)	402, 1359, 1592, 2421
BspMAI	CTGCAG	1 cut(s)	968
BspOI	GCTAGC	1 cut(s)	2478
BspPI	GGATC	2 cut(s)	1163, 1747
BspQI	GCTCTTC	3 cut(s)	597, 672, 990
BspT104I	TTCGAA	1 cut(s)	1968
BspT107I	GGYRCC	1 cut(s)	400
BspTNI	GGTCTC	2 cut(s)	249, 1198
BsrDI	GCAATG	3 cut(s)	486, 1329, 2296
BsrI	ACTGG	1 cut(s)	383
BssECI	CCNNGG	7 cut(s)	177, 585, 708, 1286, 2043, 2055, 2284
BssMI	GATC	5 cut(s)	132, 997, 1155, 1752, 2427
BssT1I	CCWWGG	2 cut(s)	177, 2055
Bst2UI	CCWGG	4 cut(s)	1534, 1595, 2044, 2273
Bst4CI	ACNGT	7 cut(s)	25, 554, 745, 1043, 1075, 1134, 2323
Bst6I	CTCTTC	5 cut(s)	597, 672, 784, 990, 1835
BstBI	TTCGAA	1 cut(s)	1968
BstC8I	GCNNGC	5 cut(s)	267, 437, 968, 2424, 2476
BstDSI	CCRYGG	1 cut(s)	177
BstF5I	GGATG	3 cut(s)	1797, 1873, 2086
BstH2I	RGCGCY	2 cut(s)	1603, 2376
BstHHI	GCGC	2 cut(s)	1602, 2375
BstKTI	GATC	5 cut(s)	135, 1000, 1158, 1755, 2430
BstMAI	GTCTC	4 cut(s)	249, 323, 786, 1198
BstMBI	GATC	5 cut(s)	132, 997, 1155, 1752, 2427
BstMCI	CGRYCG	1 cut(s)	1918
BstMWI	GCNNNNNNNGC	4 cut(s)	278, 353, 688, 989
BstNI	CCWGG	4 cut(s)	1534, 1595, 2044, 2273
BstNSI	RCATGY	1 cut(s)	1557
BstPAI	GACNNNNGTC	1 cut(s)	113
BstSCI	CCNGG	8 cut(s)	707, 708, 1285, 1286, 1532, 1593, 2042, 2271
BstSFI	CTRYAG	1 cut(s)	964
BstSLI	GKGCMC	1 cut(s)	1649
BstV1I	GCAGC	6 cut(s)	200, 256, 356, 457, 1975, 2382
BstXI	CCANNNNNNTGG	1 cut(s)	2043
Bsu36I	CCTNAGG	1 cut(s)	636
BsuI	GTATCC	1 cut(s)	957
BsuRI	GGCC	7 cut(s)	439, 970, 1022, 1285, 2060, 2190, 2422
BtgI	CCRYGG	1 cut(s)	177
BtgZI	GCGATG	1 cut(s)	477
BtsCI	GGATG	3 cut(s)	1797, 1873, 2086
BtsI	GCAGTG	2 cut(s)	1770, 1948
BtsIMutI	CAGTG	6 cut(s)	390, 1048, 1080, 1770, 1948, 1956
Cac8I	GCNNGC	5 cut(s)	267, 437, 968, 2424, 2476
CciI	TCATGA	1 cut(s)	856
CfoI	GCGC	2 cut(s)	1602, 2375
Cfr13I	GGNCC	4 cut(s)	1284, 2156, 2188, 2420
Cfr9I	CCCGGG	2 cut(s)	708, 1286
CseI	GACGC	1 cut(s)	103
Csp6I	GTAC	4 cut(s)	1130, 1138, 1415, 1904
CviAII	CATG	5 cut(s)	178, 325, 857, 1554, 2360
CviQI	GTAC	4 cut(s)	1130, 1138, 1415, 1904
DpnI	GATC	5 cut(s)	134, 999, 1157, 1754, 2429
DpnII	GATC	5 cut(s)	132, 997, 1155, 1752, 2427
DraIII	CACNNNGTG	1 cut(s)	1632
DrdI	GACNNNNNNGTC	1 cut(s)	848
DseDI	GACNNNNNNGTC	1 cut(s)	848
EaeI	YGGCCR	1 cut(s)	437
Eam1104I	CTCTTC	5 cut(s)	597, 672, 784, 990, 1835
EarI	CTCTTC	5 cut(s)	597, 672, 784, 990, 1835
Ecl136II	GAGCTC	2 cut(s)	374, 2356
Eco130I	CCWWGG	2 cut(s)	177, 2055
Eco24I	GRGCYC	2 cut(s)	376, 2358
Eco31I	GGTCTC	2 cut(s)	249, 1198
Eco47I	GGWCC	1 cut(s)	2156
Eco47III	AGCGCT	1 cut(s)	2374
Eco53kI	GAGCTC	2 cut(s)	374, 2356
Eco57I	CTGAAG	5 cut(s)	303, 710, 1859, 2273, 2441
Eco81I	CCTNAGG	1 cut(s)	636
Eco88I	CYCGRG	3 cut(s)	708, 1286, 1716
EcoICRI	GAGCTC	2 cut(s)	374, 2356
EcoO109I	RGGNCCY	1 cut(s)	2420
EcoRI	GAATTC	2 cut(s)	4, 2000
EcoRII	CCWGG	4 cut(s)	1532, 1593, 2042, 2271
EcoT14I	CCWWGG	2 cut(s)	177, 2055
EcoT22I	ATGCAT	1 cut(s)	488
EcoT38I	GRGCYC	2 cut(s)	376, 2358
ErhI	CCWWGG	2 cut(s)	177, 2055
FaeI	CATG	5 cut(s)	181, 328, 860, 1557, 2363
FaqI	GGGAC	2 cut(s)	580, 792
FatI	CATG	5 cut(s)	177, 324, 856, 1553, 2359
FauI	CCCGC	1 cut(s)	1384
FauNDI	CATATG	2 cut(s)	994, 2008
FbaI	TGATCA	1 cut(s)	997
FblI	GTMKAC	1 cut(s)	1569
Fnu4HI	GCNGC	8 cut(s)	189, 270, 345, 399, 433, 471, 1989, 2371
FokI	GGATG	3 cut(s)	1784, 1880, 2093
FriOI	GRGCYC	2 cut(s)	376, 2358
Fsp4HI	GCNGC	8 cut(s)	189, 270, 345, 399, 433, 471, 1989, 2371
GlaI	GCGC	2 cut(s)	1601, 2374
GluI	GCNGC	8 cut(s)	189, 270, 345, 399, 433, 471, 1989, 2371
GsaI	CCCAGC	1 cut(s)	1321
GsuI	CTGGAG	1 cut(s)	1616
HaeII	RGCGCY	2 cut(s)	1603, 2376
HaeIII	GGCC	7 cut(s)	439, 970, 1022, 1285, 2060, 2190, 2422
HapII	CCGG	3 cut(s)	709, 1287, 2396
HgaI	GACGC	1 cut(s)	103
HhaI	GCGC	2 cut(s)	1602, 2375
Hin1II	CATG	5 cut(s)	181, 328, 860, 1557, 2363
Hin6I	GCGC	2 cut(s)	1600, 2373
HinP1I	GCGC	2 cut(s)	1600, 2373
HincII	GTYRAC	2 cut(s)	1301, 2115
HindII	GTYRAC	2 cut(s)	1301, 2115
HindIII	AAGCTT	2 cut(s)	689, 2164
HpaII	CCGG	3 cut(s)	709, 1287, 2396
Hpy166II	GTNNAC	9 cut(s)	66, 1162, 1301, 1432, 1441, 1570, 1662, 1946, 2115
Hpy188I	TCNGA	8 cut(s)	586, 649, 1225, 1296, 1498, 2025, 2121, 2152
Hpy8I	GTNNAC	9 cut(s)	66, 1162, 1301, 1432, 1441, 1570, 1662, 1946, 2115
HpyAV	CCTTC	6 cut(s)	298, 854, 1112, 1166, 1381, 1675
HpyCH4III	ACNGT	7 cut(s)	25, 554, 745, 1043, 1075, 1134, 2323
HpyCH4IV	ACGT	3 cut(s)	1413, 1935, 2172
HpyCH4V	TGCA	9 cut(s)	188, 427, 486, 491, 506, 966, 1274, 2012, 2294
HpyF10VI	GCNNNNNNNGC	4 cut(s)	278, 353, 688, 989
HpySE526I	ACGT	3 cut(s)	1413, 1935, 2172
Hsp92II	CATG	5 cut(s)	181, 328, 860, 1557, 2363
HspAI	GCGC	2 cut(s)	1600, 2373
Ksp22I	TGATCA	1 cut(s)	997
Kzo9I	GATC	5 cut(s)	132, 997, 1155, 1752, 2427
LguI	GCTCTTC	3 cut(s)	597, 672, 990
LmnI	GCTCC	6 cut(s)	128, 1312, 1597, 2361, 2380, 2446
Lsp1109I	GCAGC	6 cut(s)	200, 256, 356, 457, 1975, 2382
LweI	GCATC	3 cut(s)	58, 628, 2458
MaeII	ACGT	3 cut(s)	1413, 1935, 2172
MaeIII	GTNAC	7 cut(s)	115, 548, 745, 1549, 1819, 1882, 2094
MalI	GATC	5 cut(s)	134, 999, 1157, 1754, 2429
MboI	GATC	5 cut(s)	132, 997, 1155, 1752, 2427
MfeI	CAATTG	2 cut(s)	511, 2037
MhlI	GDGCHC	3 cut(s)	376, 1649, 2358
MlsI	TGGCCA	1 cut(s)	439
MluNI	TGGCCA	1 cut(s)	439
MlyI	GAGTC	4 cut(s)	788, 1306, 1472, 2110
MmeI	TCCRAC	3 cut(s)	106, 1825, 2437
Mox20I	TGGCCA	1 cut(s)	439
Mph1103I	ATGCAT	1 cut(s)	488
MscI	TGGCCA	1 cut(s)	439
MseI	TTAA	7 cut(s)	144, 654, 900, 1067, 1097, 1620, 1712
MslI	CAYNNNNRTG	2 cut(s)	1028, 1832
Msp20I	TGGCCA	1 cut(s)	439
MspA1I	CMGCKG	2 cut(s)	191, 435
MspI	CCGG	3 cut(s)	709, 1287, 2396
MspR9I	CCNGG	8 cut(s)	709, 710, 1287, 1288, 1534, 1595, 2044, 2273
MunI	CAATTG	2 cut(s)	511, 2037
Mva1269I	GAATGC	2 cut(s)	932, 1964
MvaI	CCWGG	4 cut(s)	1534, 1595, 2044, 2273
MwoI	GCNNNNNNNGC	4 cut(s)	278, 353, 688, 989
NciI	CCSGG	4 cut(s)	709, 710, 1287, 1288
NcoI	CCATGG	1 cut(s)	177
NdeI	CATATG	2 cut(s)	994, 2008
NdeII	GATC	5 cut(s)	132, 997, 1155, 1752, 2427
NheI	GCTAGC	1 cut(s)	2474
NlaIII	CATG	5 cut(s)	181, 328, 860, 1557, 2363
NlaIV	GGNNCC	4 cut(s)	402, 1359, 1592, 2421
NmuCI	GTSAC	5 cut(s)	115, 745, 1549, 1882, 2094
NsiI	ATGCAT	1 cut(s)	488
NspI	RCATGY	1 cut(s)	1557
NspV	TTCGAA	1 cut(s)	1968
PaeR7I	CTCGAG	1 cut(s)	1716
PagI	TCATGA	1 cut(s)	856
PciI	ACATGT	1 cut(s)	1553
PciSI	GCTCTTC	3 cut(s)	597, 672, 990
PctI	GAATGC	2 cut(s)	932, 1964
PfeI	GAWTC	9 cut(s)	217, 245, 879, 1291, 1394, 1636, 1874, 2122, 2337
PflMI	CCANNNNNTGG	2 cut(s)	1214, 1317
PfoI	TCCNGGA	1 cut(s)	1593
PkrI	GCNGC	8 cut(s)	190, 271, 346, 400, 434, 472, 1990, 2372
PleI	GAGTC	4 cut(s)	788, 1305, 1471, 2110
PpsI	GAGTC	4 cut(s)	788, 1305, 1471, 2110
PscI	ACATGT	1 cut(s)	1553
PshAI	GACNNNNGTC	1 cut(s)	113
PshBI	ATTAAT	1 cut(s)	900
Psp124BI	GAGCTC	2 cut(s)	376, 2358
Psp6I	CCWGG	4 cut(s)	1532, 1593, 2042, 2271
PspFI	CCCAGC	1 cut(s)	1317
PspGI	CCWGG	4 cut(s)	1532, 1593, 2042, 2271
PspN4I	GGNNCC	4 cut(s)	402, 1359, 1592, 2421
PspPI	GGNCC	4 cut(s)	1284, 2156, 2188, 2420
PspXI	VCTCGAGB	1 cut(s)	1716
PstI	CTGCAG	1 cut(s)	968
PvuII	CAGCTG	1 cut(s)	191
RsaI	GTAC	4 cut(s)	1131, 1139, 1416, 1905
RsaNI	GTAC	4 cut(s)	1130, 1138, 1415, 1904
RseI	CAYNNNNRTG	2 cut(s)	1028, 1832
SacI	GAGCTC	2 cut(s)	376, 2358
SapI	GCTCTTC	3 cut(s)	597, 672, 990
SaqAI	TTAA	7 cut(s)	144, 654, 900, 1067, 1097, 1620, 1712
SatI	GCNGC	8 cut(s)	189, 270, 345, 399, 433, 471, 1989, 2371
Sau3AI	GATC	5 cut(s)	132, 997, 1155, 1752, 2427
Sau96I	GGNCC	4 cut(s)	1284, 2156, 2188, 2420
ScaI	AGTACT	1 cut(s)	1131
SchI	GAGTC	4 cut(s)	788, 1306, 1472, 2110
ScrFI	CCNGG	8 cut(s)	709, 710, 1287, 1288, 1534, 1595, 2044, 2273
SduI	GDGCHC	3 cut(s)	376, 1649, 2358
SfaNI	GCATC	3 cut(s)	58, 628, 2458
SfcI	CTRYAG	1 cut(s)	964
Sfr274I	CTCGAG	1 cut(s)	1716
SfuI	TTCGAA	1 cut(s)	1968
SinI	GGWCC	1 cut(s)	2156
SlaI	CTCGAG	1 cut(s)	1716
SmaI	CCCGGG	2 cut(s)	710, 1288
SmiMI	CAYNNNNRTG	2 cut(s)	1028, 1832
SmlI	CTYRAG	2 cut(s)	1716, 1762
SmoI	CTYRAG	2 cut(s)	1716, 1762
SpeI	ACTAGT	1 cut(s)	905
SsiI	CCGC	4 cut(s)	398, 433, 1377, 1547
SspI	AATATT	1 cut(s)	2019
SstI	GAGCTC	2 cut(s)	376, 2358
StyD4I	CCNGG	8 cut(s)	707, 708, 1285, 1286, 1532, 1593, 2042, 2271
StyI	CCWWGG	2 cut(s)	177, 2055
TaaI	ACNGT	7 cut(s)	25, 554, 745, 1043, 1075, 1134, 2323
TaiI	ACGT	3 cut(s)	1416, 1938, 2175
TaqI	TCGA	5 cut(s)	370, 988, 1717, 1914, 1968
TaqII	GACCGA	2 cut(s)	1440, 1932
TatI	WGTACW	3 cut(s)	1129, 1137, 1903
TauI	GCSGC	2 cut(s)	401, 435
TfiI	GAWTC	9 cut(s)	217, 245, 879, 1291, 1394, 1636, 1874, 2122, 2337
Tru1I	TTAA	7 cut(s)	144, 654, 900, 1067, 1097, 1620, 1712
Tru9I	TTAA	7 cut(s)	144, 654, 900, 1067, 1097, 1620, 1712
TscAI	CASTG	6 cut(s)	390, 1048, 1080, 1777, 1948, 1963
TseFI	GTSAC	5 cut(s)	115, 745, 1549, 1882, 2094
TseI	GCWGC	6 cut(s)	188, 269, 344, 470, 1988, 2370
Tsp45I	GTSAC	5 cut(s)	115, 745, 1549, 1882, 2094
TspMI	CCCGGG	2 cut(s)	708, 1286
TspRI	CASTG	6 cut(s)	390, 1048, 1080, 1777, 1948, 1963
Van91I	CCANNNNNTGG	2 cut(s)	1214, 1317
VpaK11BI	GGWCC	1 cut(s)	2156
VspI	ATTAAT	1 cut(s)	900
XapI	RAATTY	7 cut(s)	4, 378, 1107, 1616, 1888, 2000, 2179
XbaI	TCTAGA	2 cut(s)	241, 2065
XceI	RCATGY	1 cut(s)	1557
XhoI	CTCGAG	1 cut(s)	1716
XmaI	CCCGGG	2 cut(s)	708, 1286
XmiI	GTMKAC	1 cut(s)	1569
ZrmI	AGTACT	1 cut(s)	1131
Zsp2I	ATGCAT	1 cut(s)	488

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.