RLG00000031715

Glutamate-gated receptor that probably acts as non- selective cation channel

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Reverse (-)
7699399 .. 7702591
3193 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000031715

Sequence Viewer

Length: 2394 bp
ATGACTTCTCCTTTCACTGCTACTGTTAGCAAAGTCCCAAGACTTTGGTATCTGTTTCTTCTGTTCATCATCATCACATACTCCTATGGAGTTGAAGCTGCAAATAAGACAAGTGTCTCTAATGTTGGAGCAATCATTAGTTTTAATTCTCGTATCGGGAAACAACAGAAAACTGCCATGGAGATTGCAGCTGAAAACTTCAACAACCATTCAAAGAATCATAAGATAATCATTCATTTTCTAGATTCCAATAGAGACCCCTTGCTTGCTGCTCTTTCTGCTGAAGAATTGATAAAGGAAAAGAAGGCAAAACTGCTAATGGGCATGGAGACTTGGCAGGAAGCAGCTCTAGTAGCTGATGTGGGAAATCGAGCTCAAATTCCAGTGATTTCATTTGCGGCACCAACTATAACCACCCCTCTAATGCAACGCCGCTGGCCATTTTTGATACGAATGTCAAGCGATGGTGCAGCTCAAATGAAATGCATTGCAGACATAGTTTCTGCATACAATTGGAAAAGCGTTGTGGTGATATACGAAGATGATGGTTATGGTGGTGATGTGGGGACACTGGCTCTTTTGTCCGAGGCTCTTCAAGATGTTGGTTCAAAGATTGAGCATCGTTTGGTTCTCCCTCAGGTTTCTTCTGAGTTTAATCCTAATTGGGTTGAACTAGAAGAGCTGTTGAAGCTTCCCACCTTTCAATCTCGGGTGTTCATTGTGCTTCAGTCATCTTTACCAACTGTGACTAATCTATTCAGGGTGGCAAAGAAGATGGGACTTGTAGGAAGAGACTCAGCTTGGATAATCACAGAGAGAATTAATAGTCTGCTTGACACTCAAGTCAATCATGATATGGGAGGTATTTTGGGAATCAAGAGCTACTATGCCACTAATACTAGTTCCTATATCAAGTTCAACAGGGCATTCCAAAAAAAGTATCCAGAAAAAGATGACTCCAGGCCAGGAATTTATGCTCTTCGAGCATATGATCATACTAGAATTGTAATACAGGCCATAAGAATGAGTAGTAACAGTACTACTAACATTCAGGTTGTGTTAAGTACAGTGCTAAGAAATTATCAGGGTTTAAGTGGGAAAATGCACATTGAAGGAGGTGAAGTGTTGTACTCTCCCATATTCAGGATCGTAAACATTGTGGAAGGGAACAGATACAAAGAGTTGAACTTTTGGAGACCACAGGTTGGGTTCTCAGAAAGCCTTTCAAAAGAAACAAGCAAAAACAGAAGTGATGATGGTGGTGCAGTAGTTTGGCCCGGGAATCTAAGTCAACGAGCTCCTAAAGGCTGGGCAATGCCGACTGCTGATAAGCCAATGATAATTGGGGTTCCAGGTATTTCTACCAGTAGATTTGTTAGGGTTGAGTCAGGGCACTTTTACGGTTTCTGCATTGAAATTTTCCACAAGGTGCGAAGTCGTTTGAATTATACTCTGCATTATGAATTTCAGGCCTTTGATGGCTCGTATGATGATCTGGTAGATCAAGTCCATAACAAGGTAAAAAGAGAGAAAATCACAAACAACTTAACTCGAGTAGTAGTCATAGTTTGGCTGTTTGTTGTGTTGATCCTAACCTCAAGCTACACTGCTAATTTGTCATCAATGCTCACCATCCAACGATTGAGACCAAATGTAACAGACATCGAAATGCTAAAGAGAACCAACTCAAAAGTAGGCGTGGACTGGGATTCATCATTTATCACAAATTTCTTGGTGAATGTATTTCATTTCGACCGAAATAACATCATCAACATAAGCAGCGAATCCGAATACACTGAGGCATTCAAAAACAAAAGTATATCTGCTGCCTTTCTTGAATTCCCATATGCAAAAGTATTCGTGAACCACTACTGCAATGGATATACTGCAAGCACACCCACCTTTAGATTTGGAGGACTATGCTTTATATTTCAGAAAGGCTCTCCAATTGCCGGGGATTTCACCAAGGCCATTCTAGAGTTATTGGAGGATGGAGAAGTGCAGTCACTTGAGGATACTTGGTTGACACCGAATCGTGAGTGTCCAAACAATTCAACTTCCGGTGAACCAGAAAGCTTGAACGTCAAGAATTTTATGGGCCTTTATGTAATATCTGCTGCTACTTCCACCATTTGTTTTCTATCAACCCTCACTATCCTGTTGAAGAAGTTTCACCGAGACCAGGAAACATACCGAGGCAATGCAAGTGATAAAAGTGTTTGGAACAGAACAGTTAGAATGGCAAGATTTGTATGTAATAGAGAGCTGCATGTTCCAAGCAGAGCTCCAAGTTCTGTTGACGTGCCGGAATTAACTTCTTTCCAATGGGAGCCTGCGATCACTTCCACCACTCAGGAGCATCTTCAGGCATCCACCCTAGCTAGCACAAACTGA

Protein Analysis

798

Amino Acids

89.74

Weight (kDa)

8.82

Isoelectric Point (pI)

40.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peripla_BP_6 PF13458 52 - 352 9e-19 Periplasmic binding protein
ANF_receptor PF01094 56 - 376 3.1e-38 Receptor family ligand binding region
Lig_chan PF00060 508 - 707 3.2e-19 Ligand-gated ion channel
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000350)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04591 FvH4_1g04600 FvH4_3g08210 FvH4_3g08210 FvH4_3g08211 FvH4_3g32960 FvH4_3g32961 FvH4_5g21700 FvH4_6g22211
malus_domestica MD05G1305700.v1.1 MD05G1305800.v1.1 MD05G1305900.v1.1 MD05G1306400.v1.1
prunus_persica Prupe.4G056200_v2.0.a1 Prupe.4G056200_v2.0.a1 Prupe.4G056600_v2.0.a1 Prupe.4G056600_v2.0.a1
pyrus_communis pycom05g28300 pycom05g28310 pycom05g28350 pycom10g23860
rosa_chinensis RchiOBHm_Chr5g0009861 RchiOBHm_Chr5g0009881 RchiOBHm_Chr5g0009931 RchiOBHm_Chr5g0009951 RchiOBHm_Chr5g0009981 RchiOBHm_Chr5g0055531 RchiOBHm_Chr5g0055541
rosa_laevigata RLG00000015779 RLG00000031705 RLG00000031706 RLG00000031711 RLG00000031713 RLG00000031715 RLG00000031716 RLG00000034996
rosa_multiflora Rmu_co8083594.1_g000001 Rmu_co8206032.1_g000001 Rmu_co8356045.1_g000001 Rmu_sc0000773.1_g000002 Rmu_sc0001709.1_g000001 Rmu_sc0001709.1_g000007 Rmu_sc0001709.1_g000012 Rmu_sc0001709.1_g000013 Rmu_sc0001709.1_g000018 Rmu_sc0001709.1_g000019 Rmu_sc0002275.1_g000004 Rmu_sc0003071.1_g000002 Rmu_sc0003071.1_g000003 Rmu_sc0003630.1_g000014 Rmu_sc0003630.1_g000017 Rmu_sc0003630.1_g000043 Rmu_sc0003630.1_g000044 Rmu_sc0004626.1_g000007
rosa_roxburghii Rroxscaffold_1G00024770 Rroxscaffold_1G00066180 Rroxscaffold_1G00066200 Rroxscaffold_1G00066210 Rroxscaffold_1G00066240 Rroxscaffold_1G00066250 Rroxscaffold_1G00066320 Rroxscaffold_1G00066340 Rroxscaffold_3G00234120
rosa_rugosa Rorug04G0446400 Rorug04G0446500 Rorug04G0446600 Rorug04G0447000 Rorug04G0447100 Rorug04G0447200 Rorug04G0447300 Rorug04G0447900 Rorug04G0448200
rosa_samantha Rh2CG021600 Rh2DG021300 Rh4AG195700 Rh4BG194700 Rh5AG077900 Rh5AG078100 Rh5AG078600 Rh5AG078700 Rh5AG078900 Rh5AG079000 Rh5AG079100 Rh5AG363100 Rh5CG085300 Rh5CG085900 Rh5CG086000 Rh5CG086200 Rh5CG086400 Rh5CG086500 Rh5CG397300 Rh5DG073400 Rh5DG074000 Rh5DG074100 Rh5DG074300 Rh5DG074500 Rh5DG074600 Rh5DG129000 Rh5DG129400 Rh5DG388500
rosa_wichuraiana Rw2G001690 Rw5G007180 Rw5G007190 Rw5G007230 Rw5G007240 Rw5G007250 Rw5G007320 Rw5G034180

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 842
AccB1I GGYRCC 1 cut(s) 400
AccB7I CCANNNNNTGG 1 cut(s) 1205
AciI CCGC 2 cut(s) 398, 433
AclWI GGATC 2 cut(s) 1154, 1582
AcoI YGGCCR 1 cut(s) 437
AcsI RAATTY 7 cut(s) 378, 969, 1416, 1463, 1726, 1838, 2089
AcuI CTGAAG 3 cut(s) 303, 710, 2348
AdeI CACNNNGTG 1 cut(s) 1429
AfaI GTAC 3 cut(s) 1039, 1066, 1130
AfiI CCNNNNNNNGG 5 cut(s) 1143, 1205, 1516, 1952, 2182
AhlI ACTAGT 1 cut(s) 899
AjiI CACGTC 1 cut(s) 2302
AjnI CCWGG 4 cut(s) 959, 964, 1351, 2181
Alw21I GWGCWC 3 cut(s) 376, 1300, 2287
Alw26I GTCTC 7 cut(s) 121, 249, 323, 786, 1189, 1639, 2172
AlwI GGATC 2 cut(s) 1154, 1582
Ama87I CYCGRG 3 cut(s) 708, 1277, 1551
AoxI GGCC 7 cut(s) 437, 962, 1014, 1274, 1470, 1968, 2098
ApeKI GCWGC 9 cut(s) 98, 188, 269, 344, 470, 1779, 1826, 2117, 2266
ApoI RAATTY 7 cut(s) 378, 969, 1416, 1463, 1726, 1838, 2089
AseI ATTAAT 1 cut(s) 822
AspS9I GGNCC 2 cut(s) 1275, 2098
AsuC2I CCSGG 3 cut(s) 1278, 1279, 1954
AsuHPI GGTGA 8 cut(s) 541, 569, 1130, 1621, 1747, 1954, 2075, 2165
AsuNHI GCTAGC 1 cut(s) 2381
AvaI CYCGRG 3 cut(s) 708, 1277, 1551
AxyI CCTNAGG 1 cut(s) 636
BaeGI GKGCMC 1 cut(s) 1395
BaeI ACNNNNGTAYC 4 cut(s) 32, 65, 440, 473
BalI TGGCCA 1 cut(s) 439
BanI GGYRCC 1 cut(s) 400
BanII GRGCYC 3 cut(s) 376, 1300, 2287
Bbv12I GWGCWC 3 cut(s) 376, 1300, 2287
BbvI GCAGC 9 cut(s) 85, 200, 256, 356, 482, 1791, 1813, 2104, 2253
BccI CCATC 7 cut(s) 458, 539, 769, 1250, 1472, 1640, 1985
BciT130I CCWGG 4 cut(s) 961, 966, 1353, 2183
BciVI GTATCC 2 cut(s) 951, 2008
BclI TGATCA 1 cut(s) 991
BcnI CCSGG 3 cut(s) 1278, 1279, 1954
BcoDI GTCTC 7 cut(s) 121, 249, 323, 786, 1189, 1639, 2172
BcuI ACTAGT 1 cut(s) 899
BfaI CTAG 8 cut(s) 242, 350, 674, 900, 999, 1976, 2378, 2382
BfuI GTATCC 2 cut(s) 951, 2008
BmcAI AGTACT 1 cut(s) 1039
Bme1390I CCNGG 7 cut(s) 961, 966, 1278, 1279, 1353, 1954, 2183
BmeT110I CYCGRG 3 cut(s) 708, 1277, 1551
BmgBI CACGTC 1 cut(s) 2302
BmgT120I GGNCC 2 cut(s) 1275, 2098
BmiI GGNNCC 3 cut(s) 402, 1350, 2331
BmrFI CCNGG 7 cut(s) 961, 966, 1278, 1279, 1353, 1954, 2183
BmrI ACTGGG 1 cut(s) 1714
BmsI GCATC 3 cut(s) 628, 2368, 2378
BmtI GCTAGC 1 cut(s) 2385
BmuI ACTGGG 1 cut(s) 1714
BoxI GACNNNNGTC 1 cut(s) 113
BpmI CTGGAG 1 cut(s) 943
BpuEI CTTGAG 3 cut(s) 825, 1582, 2030
BpuMI CCSGG 3 cut(s) 1278, 1279, 1954
BsaI GGTCTC 4 cut(s) 249, 1189, 1639, 2172
BsaJI CCNNGG 6 cut(s) 177, 585, 1277, 1953, 1965, 2194
BsaWI WCCGGW 1 cut(s) 2060
BsaXI ACNNNNNCTCC 2 cut(s) 1107, 1137
Bsc4I CCNNNNNNNGG 5 cut(s) 1143, 1205, 1516, 1952, 2182
Bse1I ACTGG 4 cut(s) 383, 576, 1365, 1709
Bse21I CCTNAGG 1 cut(s) 636
Bse3DI GCAATG 4 cut(s) 486, 1320, 1882, 2206
BseBI CCWGG 4 cut(s) 961, 966, 1353, 2183
BseDI CCNNGG 6 cut(s) 177, 585, 1277, 1953, 1965, 2194
BseGI GGATG 3 cut(s) 1632, 1996, 2369
BseLI CCNNNNNNNGG 5 cut(s) 1143, 1205, 1516, 1952, 2182
BseMI GCAATG 4 cut(s) 486, 1320, 1882, 2206
BseMII CTCAG 6 cut(s) 639, 650, 810, 1227, 1788, 2366
BseNI ACTGG 4 cut(s) 383, 576, 1365, 1709
BseSI GKGCMC 1 cut(s) 1395
BseXI GCAGC 9 cut(s) 85, 200, 256, 356, 482, 1791, 1813, 2104, 2253
BseYI CCCAGC 1 cut(s) 1308
BsgI GTGCAG 3 cut(s) 489, 1284, 2021
Bsh1285I CGRYCG 1 cut(s) 1756
BshFI GGCC 7 cut(s) 439, 964, 1016, 1276, 1472, 1970, 2100
BshNI GGYRCC 1 cut(s) 400
BsiEI CGRYCG 1 cut(s) 1756
BsiHKAI GWGCWC 3 cut(s) 376, 1300, 2287
BsiHKCI CYCGRG 3 cut(s) 708, 1277, 1551
BsiSI CCGG 4 cut(s) 1278, 1953, 2061, 2306
BslFI GGGAC 3 cut(s) 20, 580, 792
BslI CCNNNNNNNGG 5 cut(s) 1143, 1205, 1516, 1952, 2182
BsmAI GTCTC 7 cut(s) 121, 249, 323, 786, 1189, 1639, 2172
BsmFI GGGAC 3 cut(s) 20, 580, 792
BsmI GAATGC 2 cut(s) 926, 1802
BsnI GGCC 7 cut(s) 439, 964, 1016, 1276, 1472, 1970, 2100
Bso31I GGTCTC 4 cut(s) 249, 1189, 1639, 2172
BsoBI CYCGRG 3 cut(s) 708, 1277, 1551
Bsp1286I GDGCHC 4 cut(s) 376, 1300, 1395, 2287
Bsp143I GATC 6 cut(s) 991, 1146, 1492, 1501, 1587, 2337
Bsp19I CCATGG 1 cut(s) 177
BspACI CCGC 2 cut(s) 398, 433
BspANI GGCC 7 cut(s) 439, 964, 1016, 1276, 1472, 1970, 2100
BspCNI CTCAG 6 cut(s) 640, 649, 809, 1226, 1789, 2365
BspHI TCATGA 1 cut(s) 850
BspLI GGNNCC 3 cut(s) 402, 1350, 2331
BspOI GCTAGC 1 cut(s) 2385
BspPI GGATC 2 cut(s) 1154, 1582
BspQI GCTCTTC 3 cut(s) 597, 672, 984
BspT107I GGYRCC 1 cut(s) 400
BspTNI GGTCTC 4 cut(s) 249, 1189, 1639, 2172
BsrDI GCAATG 4 cut(s) 486, 1320, 1882, 2206
BsrI ACTGG 4 cut(s) 383, 576, 1365, 1709
BssECI CCNNGG 6 cut(s) 177, 585, 1277, 1953, 1965, 2194
BssMI GATC 6 cut(s) 991, 1146, 1492, 1501, 1587, 2337
BssT1I CCWWGG 2 cut(s) 177, 1965
Bst2UI CCWGG 4 cut(s) 961, 966, 1353, 2183
Bst4CI ACNGT 6 cut(s) 25, 745, 1037, 1069, 1403, 2233
Bst6I CTCTTC 4 cut(s) 597, 672, 784, 984
BstC8I GCNNGC 5 cut(s) 267, 437, 1891, 2334, 2383
BstDEI CTNAG 8 cut(s) 636, 648, 796, 1073, 1213, 1286, 1797, 2352
BstDSI CCRYGG 1 cut(s) 177
BstF5I GGATG 3 cut(s) 1632, 1996, 2369
BstKTI GATC 6 cut(s) 994, 1149, 1495, 1504, 1590, 2340
BstMAI GTCTC 7 cut(s) 121, 249, 323, 786, 1189, 1639, 2172
BstMBI GATC 6 cut(s) 991, 1146, 1492, 1501, 1587, 2337
BstMCI CGRYCG 1 cut(s) 1756
BstMWI GCNNNNNNNGC 4 cut(s) 278, 353, 688, 983
BstNI CCWGG 4 cut(s) 961, 966, 1353, 2183
BstNSI RCATGY 1 cut(s) 2273
BstPAI GACNNNNGTC 1 cut(s) 113
BstSCI CCNGG 7 cut(s) 959, 964, 1276, 1277, 1351, 1952, 2181
BstSLI GKGCMC 1 cut(s) 1395
BstV1I GCAGC 9 cut(s) 85, 200, 256, 356, 482, 1791, 1813, 2104, 2253
BstXI CCANNNNNNTGG 1 cut(s) 45
Bsu36I CCTNAGG 1 cut(s) 636
BsuI GTATCC 2 cut(s) 951, 2008
BsuRI GGCC 7 cut(s) 439, 964, 1016, 1276, 1472, 1970, 2100
BtgI CCRYGG 1 cut(s) 177
BtgZI GCGATG 1 cut(s) 477
BtrI CACGTC 1 cut(s) 2302
BtsCI GGATG 3 cut(s) 1632, 1996, 2369
BtsI GCAGTG 2 cut(s) 15, 1605
BtsIMutI CAGTG 6 cut(s) 15, 390, 569, 1074, 1605, 1794
Cac8I GCNNGC 5 cut(s) 267, 437, 1891, 2334, 2383
CciI TCATGA 1 cut(s) 850
Cfr13I GGNCC 2 cut(s) 1275, 2098
Cfr9I CCCGGG 1 cut(s) 1277
Csp6I GTAC 3 cut(s) 1038, 1065, 1129
CviAII CATG 4 cut(s) 178, 325, 851, 2270
CviQI GTAC 3 cut(s) 1038, 1065, 1129
DdeI CTNAG 8 cut(s) 636, 648, 796, 1073, 1213, 1286, 1797, 2352
DpnI GATC 6 cut(s) 993, 1148, 1494, 1503, 1589, 2339
DpnII GATC 6 cut(s) 991, 1146, 1492, 1501, 1587, 2337
DraIII CACNNNGTG 1 cut(s) 1429
DrdI GACNNNNNNGTC 1 cut(s) 842
DseDI GACNNNNNNGTC 1 cut(s) 842
EaeI YGGCCR 1 cut(s) 437
Eam1104I CTCTTC 4 cut(s) 597, 672, 784, 984
EarI CTCTTC 4 cut(s) 597, 672, 784, 984
Ecl136II GAGCTC 3 cut(s) 374, 1298, 2285
Eco130I CCWWGG 2 cut(s) 177, 1965
Eco147I AGGCCT 1 cut(s) 1472
Eco24I GRGCYC 3 cut(s) 376, 1300, 2287
Eco31I GGTCTC 4 cut(s) 249, 1189, 1639, 2172
Eco53kI GAGCTC 3 cut(s) 374, 1298, 2285
Eco57I CTGAAG 3 cut(s) 303, 710, 2348
Eco81I CCTNAGG 1 cut(s) 636
Eco88I CYCGRG 3 cut(s) 708, 1277, 1551
EcoICRI GAGCTC 3 cut(s) 374, 1298, 2285
EcoRI GAATTC 1 cut(s) 1838
EcoRII CCWGG 4 cut(s) 959, 964, 1351, 2181
EcoT14I CCWWGG 2 cut(s) 177, 1965
EcoT22I ATGCAT 1 cut(s) 488
EcoT38I GRGCYC 3 cut(s) 376, 1300, 2287
ErhI CCWWGG 2 cut(s) 177, 1965
FaeI CATG 4 cut(s) 181, 328, 854, 2273
FaqI GGGAC 3 cut(s) 20, 580, 792
FatI CATG 4 cut(s) 177, 324, 850, 2269
FauNDI CATATG 2 cut(s) 988, 1846
FbaI TGATCA 1 cut(s) 991
FokI GGATG 3 cut(s) 1619, 2003, 2356
FriOI GRGCYC 3 cut(s) 376, 1300, 2287
FspBI CTAG 8 cut(s) 242, 350, 674, 900, 999, 1976, 2378, 2382
GsaI CCCAGC 1 cut(s) 1312
GsuI CTGGAG 1 cut(s) 943
HaeIII GGCC 7 cut(s) 439, 964, 1016, 1276, 1472, 1970, 2100
HapII CCGG 4 cut(s) 1278, 1953, 2061, 2306
Hin1II CATG 4 cut(s) 181, 328, 854, 2273
HincII GTYRAC 3 cut(s) 1292, 2025, 2299
HindII GTYRAC 3 cut(s) 1292, 2025, 2299
HindIII AAGCTT 2 cut(s) 689, 2074
HpaII CCGG 4 cut(s) 1278, 1953, 2061, 2306
HphI GGTGA 8 cut(s) 541, 569, 1130, 1621, 1747, 1954, 2075, 2165
Hpy166II GTNNAC 7 cut(s) 1153, 1292, 1702, 1864, 2025, 2066, 2299
Hpy188I TCNGA 5 cut(s) 586, 649, 1216, 1789, 1935
Hpy8I GTNNAC 7 cut(s) 1153, 1292, 1702, 1864, 2025, 2066, 2299
HpyAV CCTTC 3 cut(s) 298, 1106, 1157
HpyCH4III ACNGT 6 cut(s) 25, 745, 1037, 1069, 1403, 2233
HpyCH4IV ACGT 2 cut(s) 2082, 2301
HpyF10VI GCNNNNNNNGC 4 cut(s) 278, 353, 688, 983
HpyF3I CTNAG 8 cut(s) 636, 648, 796, 1073, 1213, 1286, 1797, 2352
HpySE526I ACGT 2 cut(s) 2082, 2301
Hsp92II CATG 4 cut(s) 181, 328, 854, 2273
Ksp22I TGATCA 1 cut(s) 991
Kzo9I GATC 6 cut(s) 991, 1146, 1492, 1501, 1587, 2337
LguI GCTCTTC 3 cut(s) 597, 672, 984
LmnI GCTCC 5 cut(s) 128, 1303, 2290, 2329, 2356
Lsp1109I GCAGC 9 cut(s) 85, 200, 256, 356, 482, 1791, 1813, 2104, 2253
LweI GCATC 3 cut(s) 628, 2368, 2378
MaeI CTAG 8 cut(s) 242, 350, 674, 900, 999, 1976, 2378, 2382
MaeII ACGT 2 cut(s) 2082, 2301
MaeIII GTNAC 4 cut(s) 745, 1031, 1654, 2004
MalI GATC 6 cut(s) 993, 1148, 1494, 1503, 1589, 2339
MboI GATC 6 cut(s) 991, 1146, 1492, 1501, 1587, 2337
MfeI CAATTG 2 cut(s) 511, 1947
MhlI GDGCHC 4 cut(s) 376, 1300, 1395, 2287
MlsI TGGCCA 1 cut(s) 439
MluNI TGGCCA 1 cut(s) 439
MlyI GAGTC 3 cut(s) 788, 950, 1394
MmeI TCCRAC 2 cut(s) 106, 1660
Mox20I TGGCCA 1 cut(s) 439
Mph1103I ATGCAT 1 cut(s) 488
MscI TGGCCA 1 cut(s) 439
MseI TTAA 7 cut(s) 144, 654, 822, 1061, 1091, 1547, 2312
MslI CAYNNNNRTG 2 cut(s) 1022, 1667
Msp20I TGGCCA 1 cut(s) 439
MspA1I CMGCKG 2 cut(s) 191, 435
MspI CCGG 4 cut(s) 1278, 1953, 2061, 2306
MspR9I CCNGG 7 cut(s) 961, 966, 1278, 1279, 1353, 1954, 2183
MunI CAATTG 2 cut(s) 511, 1947
Mva1269I GAATGC 2 cut(s) 926, 1802
MvaI CCWGG 4 cut(s) 961, 966, 1353, 2183
MwoI GCNNNNNNNGC 4 cut(s) 278, 353, 688, 983
NciI CCSGG 3 cut(s) 1278, 1279, 1954
NcoI CCATGG 1 cut(s) 177
NdeI CATATG 2 cut(s) 988, 1846
NdeII GATC 6 cut(s) 991, 1146, 1492, 1501, 1587, 2337
NheI GCTAGC 1 cut(s) 2381
NlaIII CATG 4 cut(s) 181, 328, 854, 2273
NlaIV GGNNCC 3 cut(s) 402, 1350, 2331
NmuCI GTSAC 2 cut(s) 745, 2004
NsiI ATGCAT 1 cut(s) 488
NspI RCATGY 1 cut(s) 2273
PaeR7I CTCGAG 1 cut(s) 1551
PagI TCATGA 1 cut(s) 850
PceI AGGCCT 1 cut(s) 1472
PciSI GCTCTTC 3 cut(s) 597, 672, 984
PctI GAATGC 2 cut(s) 926, 1802
PfeI GAWTC 7 cut(s) 217, 245, 873, 1282, 1709, 1784, 2032
PflMI CCANNNNNTGG 1 cut(s) 1205
PleI GAGTC 3 cut(s) 788, 950, 1393
PpsI GAGTC 3 cut(s) 788, 950, 1393
PshAI GACNNNNGTC 1 cut(s) 113
PshBI ATTAAT 1 cut(s) 822
Psp124BI GAGCTC 3 cut(s) 376, 1300, 2287
Psp6I CCWGG 4 cut(s) 959, 964, 1351, 2181
PspFI CCCAGC 1 cut(s) 1308
PspGI CCWGG 4 cut(s) 959, 964, 1351, 2181
PspN4I GGNNCC 3 cut(s) 402, 1350, 2331
PspPI GGNCC 2 cut(s) 1275, 2098
PspXI VCTCGAGB 1 cut(s) 1551
PvuII CAGCTG 1 cut(s) 191
RsaI GTAC 3 cut(s) 1039, 1066, 1130
RsaNI GTAC 3 cut(s) 1038, 1065, 1129
RseI CAYNNNNRTG 2 cut(s) 1022, 1667
SacI GAGCTC 3 cut(s) 376, 1300, 2287
SapI GCTCTTC 3 cut(s) 597, 672, 984
SaqAI TTAA 7 cut(s) 144, 654, 822, 1061, 1091, 1547, 2312
Sau3AI GATC 6 cut(s) 991, 1146, 1492, 1501, 1587, 2337
Sau96I GGNCC 2 cut(s) 1275, 2098
ScaI AGTACT 1 cut(s) 1039
SchI GAGTC 3 cut(s) 788, 950, 1394
ScrFI CCNGG 7 cut(s) 961, 966, 1278, 1279, 1353, 1954, 2183
SduI GDGCHC 4 cut(s) 376, 1300, 1395, 2287
SfaNI GCATC 3 cut(s) 628, 2368, 2378
Sfr274I CTCGAG 1 cut(s) 1551
SlaI CTCGAG 1 cut(s) 1551
SmaI CCCGGG 1 cut(s) 1279
SmiMI CAYNNNNRTG 2 cut(s) 1022, 1667
SmlI CTYRAG 4 cut(s) 840, 1551, 1597, 2009
SmoI CTYRAG 4 cut(s) 840, 1551, 1597, 2009
SpeI ACTAGT 1 cut(s) 899
SseBI AGGCCT 1 cut(s) 1472
SsiI CCGC 2 cut(s) 398, 433
SspMI CTAG 8 cut(s) 242, 350, 674, 900, 999, 1976, 2378, 2382
SstI GAGCTC 3 cut(s) 376, 1300, 2287
StuI AGGCCT 1 cut(s) 1472
StyD4I CCNGG 7 cut(s) 959, 964, 1276, 1277, 1351, 1952, 2181
StyI CCWWGG 2 cut(s) 177, 1965
TaaI ACNGT 6 cut(s) 25, 745, 1037, 1069, 1403, 2233
TaiI ACGT 2 cut(s) 2085, 2304
TaqI TCGA 5 cut(s) 370, 982, 1552, 1665, 1752
TaqII GACCGA 1 cut(s) 1770
TatI WGTACW 3 cut(s) 1037, 1064, 1128
TauI GCSGC 2 cut(s) 401, 435
TfiI GAWTC 7 cut(s) 217, 245, 873, 1282, 1709, 1784, 2032
Tru1I TTAA 7 cut(s) 144, 654, 822, 1061, 1091, 1547, 2312
Tru9I TTAA 7 cut(s) 144, 654, 822, 1061, 1091, 1547, 2312
TscAI CASTG 6 cut(s) 22, 390, 576, 1074, 1612, 1801
TseFI GTSAC 2 cut(s) 745, 2004
TseI GCWGC 9 cut(s) 98, 188, 269, 344, 470, 1779, 1826, 2117, 2266
Tsp45I GTSAC 2 cut(s) 745, 2004
TspDTI ATGAA 8 cut(s) 55, 224, 381, 494, 706, 1476, 1701, 1736
TspMI CCCGGG 1 cut(s) 1277
TspRI CASTG 6 cut(s) 22, 390, 576, 1074, 1612, 1801
Van91I CCANNNNNTGG 1 cut(s) 1205
VspI ATTAAT 1 cut(s) 822
XapI RAATTY 7 cut(s) 378, 969, 1416, 1463, 1726, 1838, 2089
XbaI TCTAGA 2 cut(s) 241, 1975
XceI RCATGY 1 cut(s) 2273
XcmI CCANNNNNNNNNTGG 1 cut(s) 1874
XhoI CTCGAG 1 cut(s) 1551
XmaI CCCGGG 1 cut(s) 1277
XspI CTAG 8 cut(s) 242, 350, 674, 900, 999, 1976, 2378, 2382
ZrmI AGTACT 1 cut(s) 1039
Zsp2I ATGCAT 1 cut(s) 488
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.