Cyclic nucleotide-gated ion channel 1-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| cNMP_binding | PF00027 | 27 - 81 | 2.5e-06 | Cyclic nucleotide-binding domain |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 2 cut(s) | 72, 181 |
| AfaI | GTAC | 1 cut(s) | 156 |
| AluBI | AGCT | 3 cut(s) | 22, 96, 238 |
| AluI | AGCT | 3 cut(s) | 22, 96, 238 |
| AlwI | GGATC | 2 cut(s) | 72, 181 |
| ApeKI | GCWGC | 1 cut(s) | 93 |
| AsuHPI | GGTGA | 2 cut(s) | 47, 88 |
| BbvI | GCAGC | 1 cut(s) | 105 |
| BisI | GCNGC | 1 cut(s) | 94 |
| BlsI | GCNGC | 1 cut(s) | 95 |
| BmiI | GGNNCC | 1 cut(s) | 184 |
| BpuEI | CTTGAG | 1 cut(s) | 89 |
| Bse118I | RCCGGY | 1 cut(s) | 73 |
| Bse1I | ACTGG | 1 cut(s) | 175 |
| BseNI | ACTGG | 1 cut(s) | 175 |
| BseXI | GCAGC | 1 cut(s) | 105 |
| BsiSI | CCGG | 2 cut(s) | 74, 189 |
| BslFI | GGGAC | 1 cut(s) | 292 |
| BsmFI | GGGAC | 1 cut(s) | 292 |
| Bsp143I | GATC | 3 cut(s) | 64, 78, 173 |
| BspLI | GGNNCC | 1 cut(s) | 184 |
| BspPI | GGATC | 2 cut(s) | 72, 181 |
| BspQI | GCTCTTC | 1 cut(s) | 228 |
| BsrFI | RCCGGY | 1 cut(s) | 73 |
| BsrI | ACTGG | 1 cut(s) | 175 |
| BssAI | RCCGGY | 1 cut(s) | 73 |
| BssMI | GATC | 3 cut(s) | 64, 78, 173 |
| Bst4CI | ACNGT | 1 cut(s) | 301 |
| Bst6I | CTCTTC | 1 cut(s) | 228 |
| BstKTI | GATC | 3 cut(s) | 67, 81, 176 |
| BstMBI | GATC | 3 cut(s) | 64, 78, 173 |
| BstV1I | GCAGC | 1 cut(s) | 105 |
| BstX2I | RGATCY | 1 cut(s) | 64 |
| BstYI | RGATCY | 1 cut(s) | 64 |
| Cfr10I | RCCGGY | 1 cut(s) | 73 |
| Csp6I | GTAC | 1 cut(s) | 155 |
| CviAII | CATG | 2 cut(s) | 144, 218 |
| CviJI | RGCY | 5 cut(s) | 22, 73, 96, 238, 259 |
| CviKI_1 | RGCY | 5 cut(s) | 22, 73, 96, 238, 259 |
| CviQI | GTAC | 1 cut(s) | 155 |
| DpnI | GATC | 3 cut(s) | 66, 80, 175 |
| DpnII | GATC | 3 cut(s) | 64, 78, 173 |
| Eam1104I | CTCTTC | 1 cut(s) | 228 |
| EarI | CTCTTC | 1 cut(s) | 228 |
| FaeI | CATG | 2 cut(s) | 147, 221 |
| FaiI | YATR | 7 cut(s) | 84, 99, 128, 145, 165, 219, 228 |
| FaqI | GGGAC | 1 cut(s) | 292 |
| FatI | CATG | 2 cut(s) | 143, 217 |
| Fnu4HI | GCNGC | 1 cut(s) | 94 |
| Fsp4HI | GCNGC | 1 cut(s) | 94 |
| GluI | GCNGC | 1 cut(s) | 94 |
| HapII | CCGG | 2 cut(s) | 74, 189 |
| Hin1II | CATG | 2 cut(s) | 147, 221 |
| HpaII | CCGG | 2 cut(s) | 74, 189 |
| HphI | GGTGA | 2 cut(s) | 47, 88 |
| Hpy166II | GTNNAC | 1 cut(s) | 155 |
| Hpy188III | TCNNGA | 4 cut(s) | 68, 107, 122, 139 |
| Hpy8I | GTNNAC | 1 cut(s) | 155 |
| HpyAV | CCTTC | 2 cut(s) | 104, 270 |
| HpyCH4III | ACNGT | 1 cut(s) | 301 |
| HpyCH4V | TGCA | 2 cut(s) | 205, 276 |
| Hsp92II | CATG | 2 cut(s) | 147, 221 |
| Kzo9I | GATC | 3 cut(s) | 64, 78, 173 |
| LguI | GCTCTTC | 1 cut(s) | 228 |
| LpnPI | CCDG | 3 cut(s) | 87, 156, 202 |
| Lsp1109I | GCAGC | 1 cut(s) | 105 |
| MaeIII | GTNAC | 2 cut(s) | 139, 295 |
| MalI | GATC | 3 cut(s) | 66, 80, 175 |
| MboI | GATC | 3 cut(s) | 64, 78, 173 |
| MboII | GAAGA | 3 cut(s) | 50, 127, 245 |
| MfeI | CAATTG | 1 cut(s) | 200 |
| MflI | RGATCY | 1 cut(s) | 64 |
| MluCI | AATT | 2 cut(s) | 200, 268 |
| MnlI | CCTC | 5 cut(s) | 55, 82, 129, 196, 301 |
| MseI | TTAA | 2 cut(s) | 24, 242 |
| MspI | CCGG | 2 cut(s) | 74, 189 |
| MunI | CAATTG | 1 cut(s) | 200 |
| NdeII | GATC | 3 cut(s) | 64, 78, 173 |
| NlaIII | CATG | 2 cut(s) | 147, 221 |
| NlaIV | GGNNCC | 1 cut(s) | 184 |
| NmuCI | GTSAC | 1 cut(s) | 139 |
| PciSI | GCTCTTC | 1 cut(s) | 228 |
| PkrI | GCNGC | 1 cut(s) | 95 |
| PspN4I | GGNNCC | 1 cut(s) | 184 |
| PsuI | RGATCY | 1 cut(s) | 64 |
| RsaI | GTAC | 1 cut(s) | 156 |
| RsaNI | GTAC | 1 cut(s) | 155 |
| SapI | GCTCTTC | 1 cut(s) | 228 |
| SaqAI | TTAA | 2 cut(s) | 24, 242 |
| SatI | GCNGC | 1 cut(s) | 94 |
| Sau3AI | GATC | 3 cut(s) | 64, 78, 173 |
| SetI | ASST | 4 cut(s) | 24, 98, 121, 240 |
| SmlI | CTYRAG | 1 cut(s) | 68 |
| SmoI | CTYRAG | 1 cut(s) | 68 |
| Sse9I | AATT | 2 cut(s) | 200, 268 |
| TaaI | ACNGT | 1 cut(s) | 301 |
| TaqI | TCGA | 1 cut(s) | 106 |
| TasI | AATT | 2 cut(s) | 200, 268 |
| TatI | WGTACW | 1 cut(s) | 154 |
| Tru1I | TTAA | 2 cut(s) | 24, 242 |
| Tru9I | TTAA | 2 cut(s) | 24, 242 |
| TseFI | GTSAC | 1 cut(s) | 139 |
| TseI | GCWGC | 1 cut(s) | 93 |
| Tsp45I | GTSAC | 1 cut(s) | 139 |
| TspDTI | ATGAA | 1 cut(s) | 17 |
| TspGWI | ACGGA | 1 cut(s) | 283 |