Cyclic nucleotide-gated ion channel 1-like
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 1388, 1556 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 221 |
| AccB1I | GGYRCC | 3 cut(s) | 129, 364, 2837 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2372 |
| AccBSI | CCGCTC | 1 cut(s) | 1516 |
| AccI | GTMKAC | 1 cut(s) | 2712 |
| AccII | CGCG | 2 cut(s) | 127, 266 |
| AccIII | TCCGGA | 2 cut(s) | 109, 1133 |
| AclWI | GGATC | 7 cut(s) | 607, 830, 870, 1937, 2006, 2495, 2753 |
| AcoI | YGGCCR | 4 cut(s) | 231, 566, 744, 2562 |
| AcsI | RAATTY | 5 cut(s) | 454, 709, 1159, 2036, 2774 |
| AcuI | CTGAAG | 1 cut(s) | 663 |
| AcvI | CACGTG | 1 cut(s) | 1858 |
| AcyI | GRCGYC | 3 cut(s) | 122, 144, 2838 |
| AfaI | GTAC | 7 cut(s) | 296, 901, 1154, 1562, 2199, 2833, 2856 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 330, 1804, 2053, 2112, 2138, 2167, 2372, 2495 |
| AflIII | ACRYGT | 4 cut(s) | 297, 1501, 1609, 1857 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1631 |
| AjnI | CCWGG | 4 cut(s) | 595, 2160, 2242, 2819 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 332, 364 |
| Alw21I | GWGCWC | 3 cut(s) | 1665, 1728, 2395 |
| Alw26I | GTCTC | 4 cut(s) | 22, 44, 1061, 2289 |
| Alw44I | GTGCAC | 1 cut(s) | 1724 |
| AlwI | GGATC | 7 cut(s) | 607, 830, 870, 1937, 2006, 2495, 2753 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 171 |
| Aor13HI | TCCGGA | 2 cut(s) | 109, 1133 |
| AoxI | GGCC | 6 cut(s) | 231, 478, 566, 744, 2425, 2562 |
| ApaI | GGGCCC | 1 cut(s) | 482 |
| ApaLI | GTGCAC | 1 cut(s) | 1724 |
| ApeKI | GCWGC | 4 cut(s) | 664, 1117, 2234, 2303 |
| ApoI | RAATTY | 5 cut(s) | 454, 709, 1159, 2036, 2774 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1179 |
| AspA2I | CCTAGG | 1 cut(s) | 2137 |
| AspLEI | GCGC | 3 cut(s) | 268, 2167, 2840 |
| AspS9I | GGNCC | 5 cut(s) | 478, 479, 1997, 2363, 2426 |
| AsuC2I | CCSGG | 1 cut(s) | 1743 |
| AsuHPI | GGTGA | 8 cut(s) | 17, 419, 425, 563, 698, 956, 995, 2128 |
| AvaII | GGWCC | 2 cut(s) | 1997, 2363 |
| AvrII | CCTAGG | 1 cut(s) | 2137 |
| AxyI | CCTNAGG | 2 cut(s) | 1629, 2430 |
| BaeGI | GKGCMC | 2 cut(s) | 482, 1728 |
| BalI | TGGCCA | 2 cut(s) | 233, 2564 |
| BanI | GGYRCC | 3 cut(s) | 129, 364, 2837 |
| BanII | GRGCYC | 6 cut(s) | 482, 596, 1438, 1665, 1696, 1990 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1136, 1168 |
| BauI | CACGAG | 1 cut(s) | 2792 |
| BbrPI | CACGTG | 1 cut(s) | 1858 |
| BbsI | GAAGAC | 2 cut(s) | 509, 2553 |
| Bbv12I | GWGCWC | 3 cut(s) | 1665, 1728, 2395 |
| BbvCI | CCTCAGC | 2 cut(s) | 164, 2741 |
| BbvI | GCAGC | 4 cut(s) | 676, 1104, 2221, 2315 |
| BceAI | ACGGC | 1 cut(s) | 165 |
| BciT130I | CCWGG | 4 cut(s) | 597, 2162, 2244, 2821 |
| BciVI | GTATCC | 1 cut(s) | 1321 |
| BclI | TGATCA | 1 cut(s) | 2154 |
| BcnI | CCSGG | 1 cut(s) | 1743 |
| BcoDI | GTCTC | 4 cut(s) | 22, 44, 1061, 2289 |
| BfaI | CTAG | 5 cut(s) | 890, 1697, 2138, 2313, 2864 |
| BfmI | CTRYAG | 1 cut(s) | 1266 |
| BfoI | RGCGCY | 1 cut(s) | 2841 |
| BfuI | GTATCC | 1 cut(s) | 1321 |
| BglII | AGATCT | 3 cut(s) | 1256, 2411, 2666 |
| BisI | GCNGC | 6 cut(s) | 31, 97, 665, 1118, 2235, 2304 |
| BlnI | CCTAGG | 1 cut(s) | 2137 |
| BlpI | GCTNAGC | 2 cut(s) | 504, 1769 |
| BlsI | GCNGC | 6 cut(s) | 32, 98, 666, 1119, 2236, 2305 |
| BmcAI | AGTACT | 1 cut(s) | 901 |
| Bme1390I | CCNGG | 5 cut(s) | 597, 1743, 2162, 2244, 2821 |
| Bme18I | GGWCC | 2 cut(s) | 1997, 2363 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1631 |
| BmgT120I | GGNCC | 5 cut(s) | 478, 479, 1997, 2363, 2426 |
| BmiI | GGNNCC | 7 cut(s) | 131, 366, 480, 1999, 2124, 2377, 2839 |
| BmrFI | CCNGG | 5 cut(s) | 597, 1743, 2162, 2244, 2821 |
| BmrI | ACTGGG | 1 cut(s) | 8 |
| BmsI | GCATC | 8 cut(s) | 570, 598, 727, 868, 964, 1315, 2074, 2428 |
| BmuI | ACTGGG | 1 cut(s) | 8 |
| BpiI | GAAGAC | 2 cut(s) | 509, 2553 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2110, 2142 |
| BpmI | CTGGAG | 5 cut(s) | 1649, 2226, 2379, 2472, 2517 |
| Bpu10I | CCTNAGC | 4 cut(s) | 164, 1989, 2062, 2741 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 504, 1769 |
| BpuEI | CTTGAG | 1 cut(s) | 1547 |
| BpuMI | CCSGG | 1 cut(s) | 1743 |
| BsaAI | YACGTR | 3 cut(s) | 70, 298, 1858 |
| BsaHI | GRCGYC | 3 cut(s) | 122, 144, 2838 |
| BsaWI | WCCGGW | 2 cut(s) | 109, 1133 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 330, 1804, 2053, 2112, 2138, 2167, 2372, 2495 |
| Bse118I | RCCGGY | 2 cut(s) | 132, 746 |
| Bse1I | ACTGG | 8 cut(s) | 14, 225, 787, 1666, 2186, 2302, 2500, 2594 |
| Bse21I | CCTNAGG | 2 cut(s) | 1629, 2430 |
| Bse3DI | GCAATG | 1 cut(s) | 997 |
| BseAI | TCCGGA | 2 cut(s) | 109, 1133 |
| BseBI | CCWGG | 4 cut(s) | 597, 2162, 2244, 2821 |
| BseGI | GGATG | 9 cut(s) | 285, 409, 742, 1306, 2062, 2089, 2102, 2176, 2820 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 330, 1804, 2053, 2112, 2138, 2167, 2372, 2495 |
| BseMI | GCAATG | 1 cut(s) | 997 |
| BseNI | ACTGG | 8 cut(s) | 14, 225, 787, 1666, 2186, 2302, 2500, 2594 |
| BseRI | GAGGAG | 3 cut(s) | 221, 224, 602 |
| BseSI | GKGCMC | 2 cut(s) | 482, 1728 |
| BseXI | GCAGC | 4 cut(s) | 676, 1104, 2221, 2315 |
| BsgI | GTGCAG | 3 cut(s) | 683, 2322, 2772 |
| Bsh1236I | CGCG | 2 cut(s) | 127, 266 |
| Bsh1285I | CGRYCG | 1 cut(s) | 180 |
| BshFI | GGCC | 6 cut(s) | 233, 480, 568, 746, 2427, 2564 |
| BshNI | GGYRCC | 3 cut(s) | 129, 364, 2837 |
| BsiEI | CGRYCG | 1 cut(s) | 180 |
| BsiHKAI | GWGCWC | 3 cut(s) | 1665, 1728, 2395 |
| BsiSI | CCGG | 6 cut(s) | 110, 133, 269, 747, 1134, 1743 |
| BslFI | GGGAC | 3 cut(s) | 1461, 1983, 2354 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 330, 1804, 2053, 2112, 2138, 2167, 2372, 2495 |
| BsmAI | GTCTC | 4 cut(s) | 22, 44, 1061, 2289 |
| BsmBI | CGTCTC | 1 cut(s) | 44 |
| BsmFI | GGGAC | 3 cut(s) | 1461, 1983, 2354 |
| BsmI | GAATGC | 2 cut(s) | 828, 1100 |
| BsnI | GGCC | 6 cut(s) | 233, 480, 568, 746, 2427, 2564 |
| Bsp120I | GGGCCC | 1 cut(s) | 478 |
| Bsp1286I | GDGCHC | 8 cut(s) | 482, 596, 1438, 1665, 1696, 1728, 1990, 2395 |
| Bsp13I | TCCGGA | 2 cut(s) | 109, 1133 |
| Bsp1407I | TGTACA | 2 cut(s) | 1152, 2854 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 504, 1769 |
| Bsp19I | CCATGG | 2 cut(s) | 234, 1803 |
| BspANI | GGCC | 6 cut(s) | 233, 480, 568, 746, 2427, 2564 |
| BspEI | TCCGGA | 2 cut(s) | 109, 1133 |
| BspFNI | CGCG | 2 cut(s) | 127, 266 |
| BspHI | TCATGA | 2 cut(s) | 832, 2770 |
| BspLI | GGNNCC | 7 cut(s) | 131, 366, 480, 1999, 2124, 2377, 2839 |
| BspPI | GGATC | 7 cut(s) | 607, 830, 870, 1937, 2006, 2495, 2753 |
| BspQI | GCTCTTC | 1 cut(s) | 108 |
| BspT107I | GGYRCC | 3 cut(s) | 129, 364, 2837 |
| BsrBI | CCGCTC | 1 cut(s) | 1516 |
| BsrDI | GCAATG | 1 cut(s) | 997 |
| BsrFI | RCCGGY | 2 cut(s) | 132, 746 |
| BsrGI | TGTACA | 2 cut(s) | 1152, 2854 |
| BsrI | ACTGG | 8 cut(s) | 14, 225, 787, 1666, 2186, 2302, 2500, 2594 |
| BssAI | RCCGGY | 2 cut(s) | 132, 746 |
| BssNI | GRCGYC | 3 cut(s) | 122, 144, 2838 |
| BssSI | CACGAG | 1 cut(s) | 2792 |
| BssT1I | CCWWGG | 8 cut(s) | 234, 252, 741, 1035, 1803, 2137, 2379, 2735 |
| Bst2BI | CACGAG | 1 cut(s) | 2792 |
| Bst2UI | CCWGG | 4 cut(s) | 597, 2162, 2244, 2821 |
| Bst4CI | ACNGT | 8 cut(s) | 229, 904, 951, 1426, 1589, 1957, 2579, 2728 |
| Bst6I | CTCTTC | 5 cut(s) | 108, 252, 1135, 1760, 1976 |
| BstACI | GRCGYC | 3 cut(s) | 122, 144, 2838 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 617 |
| BstAUI | TGTACA | 2 cut(s) | 1152, 2854 |
| BstBAI | YACGTR | 3 cut(s) | 70, 298, 1858 |
| BstC8I | GCNNGC | 9 cut(s) | 120, 826, 1122, 1304, 1702, 1706, 2048, 2052, 2621 |
| BstDSI | CCRYGG | 3 cut(s) | 147, 234, 1803 |
| BstEII | GGTNACC | 1 cut(s) | 1778 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 2136, 2165 |
| BstF5I | GGATG | 9 cut(s) | 285, 409, 742, 1306, 2062, 2089, 2102, 2176, 2820 |
| BstFNI | CGCG | 2 cut(s) | 127, 266 |
| BstH2I | RGCGCY | 1 cut(s) | 2841 |
| BstHHI | GCGC | 3 cut(s) | 268, 2167, 2840 |
| BstMAI | GTCTC | 4 cut(s) | 22, 44, 1061, 2289 |
| BstMCI | CGRYCG | 1 cut(s) | 180 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 124, 617, 1522, 2759, 2835 |
| BstNI | CCWGG | 4 cut(s) | 597, 2162, 2244, 2821 |
| BstNSI | RCATGY | 6 cut(s) | 1153, 1306, 1505, 1613, 1687, 1704 |
| BstPI | GGTNACC | 1 cut(s) | 1778 |
| BstSCI | CCNGG | 5 cut(s) | 595, 1741, 2160, 2242, 2819 |
| BstSFI | CTRYAG | 1 cut(s) | 1266 |
| BstSLI | GKGCMC | 2 cut(s) | 482, 1728 |
| BstUI | CGCG | 2 cut(s) | 127, 266 |
| BstV1I | GCAGC | 4 cut(s) | 676, 1104, 2221, 2315 |
| BstV2I | GAAGAC | 2 cut(s) | 509, 2553 |
| BstX2I | RGATCY | 5 cut(s) | 1256, 1942, 2411, 2500, 2666 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 241, 1673 |
| BstYI | RGATCY | 5 cut(s) | 1256, 1942, 2411, 2500, 2666 |
| Bsu36I | CCTNAGG | 2 cut(s) | 1629, 2430 |
| BsuI | GTATCC | 1 cut(s) | 1321 |
| BsuRI | GGCC | 6 cut(s) | 233, 480, 568, 746, 2427, 2564 |
| BtgI | CCRYGG | 3 cut(s) | 147, 234, 1803 |
| BtsCI | GGATG | 9 cut(s) | 285, 409, 742, 1306, 2062, 2089, 2102, 2176, 2820 |
| BtsI | GCAGTG | 1 cut(s) | 2548 |
| BtsIMutI | CAGTG | 6 cut(s) | 225, 1594, 1673, 2548, 2601, 2755 |
| Cac8I | GCNNGC | 9 cut(s) | 120, 826, 1122, 1304, 1702, 1706, 2048, 2052, 2621 |
| CaiI | CAGNNNCTG | 1 cut(s) | 171 |
| CciI | TCATGA | 2 cut(s) | 832, 2770 |
| CfoI | GCGC | 3 cut(s) | 268, 2167, 2840 |
| Cfr10I | RCCGGY | 2 cut(s) | 132, 746 |
| Cfr13I | GGNCC | 5 cut(s) | 478, 479, 1997, 2363, 2426 |
| CseI | GACGC | 2 cut(s) | 111, 152 |
| Csp6I | GTAC | 7 cut(s) | 295, 900, 1153, 1561, 2198, 2832, 2855 |
| CviQI | GTAC | 7 cut(s) | 295, 900, 1153, 1561, 2198, 2832, 2855 |
| DinI | GGCGCC | 1 cut(s) | 2839 |
| DraI | TTTAAA | 1 cut(s) | 2041 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 221 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1631 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 221 |
| EaeI | YGGCCR | 4 cut(s) | 231, 566, 744, 2562 |
| Eam1104I | CTCTTC | 5 cut(s) | 108, 252, 1135, 1760, 1976 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1631 |
| EarI | CTCTTC | 5 cut(s) | 108, 252, 1135, 1760, 1976 |
| EciI | GGCGGA | 5 cut(s) | 83, 167, 238, 359, 708 |
| Ecl136II | GAGCTC | 1 cut(s) | 1663 |
| Eco130I | CCWWGG | 8 cut(s) | 234, 252, 741, 1035, 1803, 2137, 2379, 2735 |
| Eco24I | GRGCYC | 6 cut(s) | 482, 596, 1438, 1665, 1696, 1990 |
| Eco47I | GGWCC | 2 cut(s) | 1997, 2363 |
| Eco53kI | GAGCTC | 1 cut(s) | 1663 |
| Eco57I | CTGAAG | 1 cut(s) | 663 |
| Eco72I | CACGTG | 1 cut(s) | 1858 |
| Eco81I | CCTNAGG | 2 cut(s) | 1629, 2430 |
| Eco91I | GGTNACC | 1 cut(s) | 1778 |
| EcoICRI | GAGCTC | 1 cut(s) | 1663 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 2136, 2165 |
| EcoO109I | RGGNCCY | 2 cut(s) | 479, 2426 |
| EcoO65I | GGTNACC | 1 cut(s) | 1778 |
| EcoRI | GAATTC | 1 cut(s) | 2774 |
| EcoRII | CCWGG | 4 cut(s) | 595, 2160, 2242, 2819 |
| EcoT14I | CCWWGG | 8 cut(s) | 234, 252, 741, 1035, 1803, 2137, 2379, 2735 |
| EcoT22I | ATGCAT | 3 cut(s) | 613, 979, 1308 |
| EcoT38I | GRGCYC | 6 cut(s) | 482, 596, 1438, 1665, 1696, 1990 |
| EgeI | GGCGCC | 1 cut(s) | 2839 |
| EheI | GGCGCC | 1 cut(s) | 2839 |
| ErhI | CCWWGG | 8 cut(s) | 234, 252, 741, 1035, 1803, 2137, 2379, 2735 |
| Esp3I | CGTCTC | 1 cut(s) | 44 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1064, 1096, 2473, 2505 |
| FaqI | GGGAC | 3 cut(s) | 1461, 1983, 2354 |
| FauI | CCCGC | 2 cut(s) | 109, 2817 |
| FbaI | TGATCA | 1 cut(s) | 2154 |
| FblI | GTMKAC | 1 cut(s) | 2712 |
| Fnu4HI | GCNGC | 6 cut(s) | 31, 97, 665, 1118, 2235, 2304 |
| FokI | GGATG | 9 cut(s) | 292, 416, 749, 1293, 2069, 2089, 2096, 2183, 2827 |
| FriOI | GRGCYC | 6 cut(s) | 482, 596, 1438, 1665, 1696, 1990 |
| Fsp4HI | GCNGC | 6 cut(s) | 31, 97, 665, 1118, 2235, 2304 |
| FspBI | CTAG | 5 cut(s) | 890, 1697, 2138, 2313, 2864 |
| GlaI | GCGC | 3 cut(s) | 267, 2166, 2839 |
| GluI | GCNGC | 6 cut(s) | 31, 97, 665, 1118, 2235, 2304 |
| GsuI | CTGGAG | 5 cut(s) | 1649, 2226, 2379, 2472, 2517 |
| HaeII | RGCGCY | 1 cut(s) | 2841 |
| HaeIII | GGCC | 6 cut(s) | 233, 480, 568, 746, 2427, 2564 |
| HapII | CCGG | 6 cut(s) | 110, 133, 269, 747, 1134, 1743 |
| HgaI | GACGC | 2 cut(s) | 111, 152 |
| HhaI | GCGC | 3 cut(s) | 268, 2167, 2840 |
| Hin1I | GRCGYC | 3 cut(s) | 122, 144, 2838 |
| Hin6I | GCGC | 3 cut(s) | 266, 2165, 2838 |
| HinP1I | GCGC | 3 cut(s) | 266, 2165, 2838 |
| HincII | GTYRAC | 2 cut(s) | 1216, 1960 |
| HindII | GTYRAC | 2 cut(s) | 1216, 1960 |
| HindIII | AAGCTT | 1 cut(s) | 852 |
| HinfI | GANTC | 9 cut(s) | 272, 514, 1007, 1190, 1234, 2098, 2176, 2385, 2582 |
| HpaI | GTTAAC | 1 cut(s) | 1216 |
| HpaII | CCGG | 6 cut(s) | 110, 133, 269, 747, 1134, 1743 |
| HphI | GGTGA | 8 cut(s) | 17, 419, 425, 563, 698, 956, 995, 2128 |
| Hpy166II | GTNNAC | 7 cut(s) | 947, 1155, 1216, 1429, 1726, 1960, 2713 |
| Hpy8I | GTNNAC | 7 cut(s) | 947, 1155, 1216, 1429, 1726, 1960, 2713 |
| Hpy99I | CGWCG | 2 cut(s) | 127, 146 |
| HpyCH4III | ACNGT | 8 cut(s) | 229, 904, 951, 1426, 1589, 1957, 2579, 2728 |
| HpyCH4IV | ACGT | 5 cut(s) | 69, 297, 660, 1857, 1974 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 124, 617, 1522, 2759, 2835 |
| HpySE526I | ACGT | 5 cut(s) | 69, 297, 660, 1857, 1974 |
| Hsp92I | GRCGYC | 3 cut(s) | 122, 144, 2838 |
| HspAI | GCGC | 3 cut(s) | 266, 2165, 2838 |
| KasI | GGCGCC | 1 cut(s) | 2837 |
| Kpn2I | TCCGGA | 2 cut(s) | 109, 1133 |
| Ksp22I | TGATCA | 1 cut(s) | 2154 |
| KspAI | GTTAAC | 1 cut(s) | 1216 |
| LguI | GCTCTTC | 1 cut(s) | 108 |
| LmnI | GCTCC | 2 cut(s) | 1668, 2398 |
| Lsp1109I | GCAGC | 4 cut(s) | 676, 1104, 2221, 2315 |
| LweI | GCATC | 8 cut(s) | 570, 598, 727, 868, 964, 1315, 2074, 2428 |
| MaeI | CTAG | 5 cut(s) | 890, 1697, 2138, 2313, 2864 |
| MaeII | ACGT | 5 cut(s) | 69, 297, 660, 1857, 1974 |
| MaeIII | GTNAC | 4 cut(s) | 223, 431, 1778, 2455 |
| MbiI | CCGCTC | 1 cut(s) | 1516 |
| MflI | RGATCY | 5 cut(s) | 1256, 1942, 2411, 2500, 2666 |
| MhlI | GDGCHC | 8 cut(s) | 482, 596, 1438, 1665, 1696, 1728, 1990, 2395 |
| MlsI | TGGCCA | 2 cut(s) | 233, 2564 |
| MluNI | TGGCCA | 2 cut(s) | 233, 2564 |
| Mly113I | GGCGCC | 1 cut(s) | 2838 |
| MlyI | GAGTC | 4 cut(s) | 281, 523, 1001, 2092 |
| MmeI | TCCRAC | 1 cut(s) | 1332 |
| Mox20I | TGGCCA | 2 cut(s) | 233, 2564 |
| Mph1103I | ATGCAT | 3 cut(s) | 613, 979, 1308 |
| MroI | TCCGGA | 2 cut(s) | 109, 1133 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1179 |
| MscI | TGGCCA | 2 cut(s) | 233, 2564 |
| MseI | TTAA | 7 cut(s) | 761, 1215, 1485, 1737, 1847, 2040, 2534 |
| MslI | CAYNNNNRTG | 3 cut(s) | 239, 1731, 2577 |
| Msp20I | TGGCCA | 2 cut(s) | 233, 2564 |
| MspA1I | CMGCKG | 2 cut(s) | 1091, 2450 |
| MspI | CCGG | 6 cut(s) | 110, 133, 269, 747, 1134, 1743 |
| MspR9I | CCNGG | 5 cut(s) | 597, 1743, 2162, 2244, 2821 |
| Mva1269I | GAATGC | 2 cut(s) | 828, 1100 |
| MvaI | CCWGG | 4 cut(s) | 597, 2162, 2244, 2821 |
| MvnI | CGCG | 2 cut(s) | 127, 266 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 124, 617, 1522, 2759, 2835 |
| NarI | GGCGCC | 1 cut(s) | 2838 |
| NciI | CCSGG | 1 cut(s) | 1743 |
| NcoI | CCATGG | 2 cut(s) | 234, 1803 |
| NlaIV | GGNNCC | 7 cut(s) | 131, 366, 480, 1999, 2124, 2377, 2839 |
| NmeAIII | GCCGAG | 1 cut(s) | 594 |
| NmuCI | GTSAC | 2 cut(s) | 223, 431 |
| NsiI | ATGCAT | 3 cut(s) | 613, 979, 1308 |
| NspI | RCATGY | 6 cut(s) | 1153, 1306, 1505, 1613, 1687, 1704 |
| PaeI | GCATGC | 2 cut(s) | 1306, 1704 |
| PagI | TCATGA | 2 cut(s) | 832, 2770 |
| PciI | ACATGT | 2 cut(s) | 1501, 1609 |
| PciSI | GCTCTTC | 1 cut(s) | 108 |
| PctI | GAATGC | 2 cut(s) | 828, 1100 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1179 |
| PfeI | GAWTC | 5 cut(s) | 1190, 1234, 2176, 2385, 2582 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2372 |
| PkrI | GCNGC | 6 cut(s) | 32, 98, 666, 1119, 2236, 2305 |
| Ple19I | CGATCG | 1 cut(s) | 180 |
| PleI | GAGTC | 4 cut(s) | 280, 522, 1001, 2092 |
| PluTI | GGCGCC | 1 cut(s) | 2841 |
| PmaCI | CACGTG | 1 cut(s) | 1858 |
| PmlI | CACGTG | 1 cut(s) | 1858 |
| PpsI | GAGTC | 4 cut(s) | 280, 522, 1001, 2092 |
| Ppu21I | YACGTR | 3 cut(s) | 70, 298, 1858 |
| PscI | ACATGT | 2 cut(s) | 1501, 1609 |
| PsiI | TTATAA | 2 cut(s) | 1388, 1556 |
| Psp124BI | GAGCTC | 1 cut(s) | 1665 |
| Psp6I | CCWGG | 4 cut(s) | 595, 2160, 2242, 2819 |
| PspCI | CACGTG | 1 cut(s) | 1858 |
| PspEI | GGTNACC | 1 cut(s) | 1778 |
| PspGI | CCWGG | 4 cut(s) | 595, 2160, 2242, 2819 |
| PspN4I | GGNNCC | 7 cut(s) | 131, 366, 480, 1999, 2124, 2377, 2839 |
| PspOMI | GGGCCC | 1 cut(s) | 478 |
| PspPI | GGNCC | 5 cut(s) | 478, 479, 1997, 2363, 2426 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 2476, 2508 |
| PstNI | CAGNNNCTG | 1 cut(s) | 171 |
| PsuI | RGATCY | 5 cut(s) | 1256, 1942, 2411, 2500, 2666 |
| PvuI | CGATCG | 1 cut(s) | 180 |
| PvuII | CAGCTG | 2 cut(s) | 1091, 2450 |
| RsaI | GTAC | 7 cut(s) | 296, 901, 1154, 1562, 2199, 2833, 2856 |
| RsaNI | GTAC | 7 cut(s) | 295, 900, 1153, 1561, 2198, 2832, 2855 |
| RseI | CAYNNNNRTG | 3 cut(s) | 239, 1731, 2577 |
| SacI | GAGCTC | 1 cut(s) | 1665 |
| SapI | GCTCTTC | 1 cut(s) | 108 |
| SaqAI | TTAA | 7 cut(s) | 761, 1215, 1485, 1737, 1847, 2040, 2534 |
| SatI | GCNGC | 6 cut(s) | 31, 97, 665, 1118, 2235, 2304 |
| Sau96I | GGNCC | 5 cut(s) | 478, 479, 1997, 2363, 2426 |
| ScaI | AGTACT | 1 cut(s) | 901 |
| SchI | GAGTC | 4 cut(s) | 281, 523, 1001, 2092 |
| ScrFI | CCNGG | 5 cut(s) | 597, 1743, 2162, 2244, 2821 |
| SduI | GDGCHC | 8 cut(s) | 482, 596, 1438, 1665, 1696, 1728, 1990, 2395 |
| SfaNI | GCATC | 8 cut(s) | 570, 598, 727, 868, 964, 1315, 2074, 2428 |
| SfcI | CTRYAG | 1 cut(s) | 1266 |
| SfoI | GGCGCC | 1 cut(s) | 2839 |
| SinI | GGWCC | 2 cut(s) | 1997, 2363 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 239, 1731, 2577 |
| SmlI | CTYRAG | 1 cut(s) | 1526 |
| SmoI | CTYRAG | 1 cut(s) | 1526 |
| SphI | GCATGC | 2 cut(s) | 1306, 1704 |
| SspDI | GGCGCC | 1 cut(s) | 2837 |
| SspMI | CTAG | 5 cut(s) | 890, 1697, 2138, 2313, 2864 |
| SstI | GAGCTC | 1 cut(s) | 1665 |
| StyD4I | CCNGG | 5 cut(s) | 595, 1741, 2160, 2242, 2819 |
| StyI | CCWWGG | 8 cut(s) | 234, 252, 741, 1035, 1803, 2137, 2379, 2735 |
| TaaI | ACNGT | 8 cut(s) | 229, 904, 951, 1426, 1589, 1957, 2579, 2728 |
| TaiI | ACGT | 5 cut(s) | 72, 300, 663, 1860, 1977 |
| TaqI | TCGA | 8 cut(s) | 141, 176, 275, 512, 682, 2253, 2436, 2607 |
| TaqII | GACCGA | 1 cut(s) | 218 |
| TatI | WGTACW | 4 cut(s) | 899, 1152, 2197, 2854 |
| TauI | GCSGC | 2 cut(s) | 33, 99 |
| TfiI | GAWTC | 5 cut(s) | 1190, 1234, 2176, 2385, 2582 |
| Tru1I | TTAA | 7 cut(s) | 761, 1215, 1485, 1737, 1847, 2040, 2534 |
| Tru9I | TTAA | 7 cut(s) | 761, 1215, 1485, 1737, 1847, 2040, 2534 |
| TscAI | CASTG | 6 cut(s) | 232, 1594, 1673, 2548, 2601, 2755 |
| TseFI | GTSAC | 2 cut(s) | 223, 431 |
| TseI | GCWGC | 4 cut(s) | 664, 1117, 2234, 2303 |
| Tsp45I | GTSAC | 2 cut(s) | 223, 431 |
| TspDTI | ATGAA | 6 cut(s) | 821, 1070, 1221, 1540, 2645, 2787 |
| TspGWI | ACGGA | 3 cut(s) | 68, 231, 2378 |
| TspRI | CASTG | 6 cut(s) | 232, 1594, 1673, 2548, 2601, 2755 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2372 |
| VneI | GTGCAC | 1 cut(s) | 1724 |
| VpaK11BI | GGWCC | 2 cut(s) | 1997, 2363 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 2136, 2165 |
| XapI | RAATTY | 5 cut(s) | 454, 709, 1159, 2036, 2774 |
| XbaI | TCTAGA | 1 cut(s) | 2863 |
| XceI | RCATGY | 6 cut(s) | 1153, 1306, 1505, 1613, 1687, 1704 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 1000, 1862, 2054 |
| XmaJI | CCTAGG | 1 cut(s) | 2137 |
| XmiI | GTMKAC | 1 cut(s) | 2712 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1179 |
| XspI | CTAG | 5 cut(s) | 890, 1697, 2138, 2313, 2864 |
| ZrmI | AGTACT | 1 cut(s) | 901 |
| Zsp2I | ATGCAT | 3 cut(s) | 613, 979, 1308 |