Prupe.2G223800_v2.0.a1

Cyclic nucleotide-gated ion channel 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
OG0000017
Physical Location & Seq
Forward (+)
25103473 .. 25107779
4307 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G223800.1

Sequence Viewer

Length: 2742 bp
ATGGAAACTCATCATGATTCCCTTCCAAGGGAGTCTTTCCTTCAAAACTGGAAGAAGATATTTGTAGCATCATGTCTGTTTGCTGTTCTGCTGGATCCATTGTTTCTCTACGTTCCTATGATGAAGGATGATATCAAGTGCCTGCAATTTGACAGAAACTTGAAGATTGCCGCTCTTCTTTTAAGATCACTCACTGATCTTTCCTATTTATTTGACATTATTTTTCAAATTTATACATCCCGCAACTATTCGGATTTCATGCATGAATATCGTCGTAGACATTATTATCGCTCGAAAATAAGATATTGGACGAAATTTTTTGTGCCAACAATAACTAAGACAATGTTGGGGTCATACAATATCTTAATTGACATTTTGGCTATTCTTCCGCTTCCACAGGTTGCAATTCTCACTTTCTTTTCAAAACTGAGGAACTTGAGATCTTTGAACACGATAAGGATGGTTACTATGAACCTTTTTGTTCTATTGCAATATGTTCCGCGAGTATTTCGTATCTACTTATTATGTGAGGAATTTAAACAGAGAAAGACTGGAGAGATTGCTATCTGGGTTAAAGGTGTCTTGAATTTCTTTATGTATATCCTTGCTAGTCATGTACTTGGTGCCATATGGTACTTTTTTGCTATTCAACGGATGGCCATTTGTTGGCACGATGCATGTCGAAAAGAAAATAAATGTAACACTAGTAGTTTTGGTTGTCGTGACCATCACGCATTTAGAAATATTACATTTCTAAATGATATATGCCCTATAAGTCCAGTGAATGTTGGTATATATATTACAGTCCTTCAATCTGGTATACCGGGGTCAACAAATTTTTTCCAGAAATTCTCCAATTGTTTTTGGTGGGGACTGCGAAATTTGAGTTCTCTTGGTTCAAACCTTGAGCCTAGCGTGGATGGATGGGAGAACCTCTTTGCAGCGTTCATCTCTATAACTGGATTGCTTTTATTCTTATATCTCATTGGAAATGTGCAGACATACATGCAGTTGGATACTCAAAGAATAGAGGCGCATAGACACAAGATGAAAATGGAACAGAAGATGGAAGAGAAAGGTCGCGAGACAGAGTTGTGGTTATCTAAAAATGGCATCCCCAAAAAGTTCAAGTCGCAGATCATGGGGAAGGTACGACAAGAACTTGAAGAAAACAGGGATGCTGATTTGGACTATATCTTCACTATTCTTCCCTTGGATCTTCAGACACGTATTAAAATGGAACAGAAGATGGAAGAGAGCGAGATAGAGTTGTGGTTATCTAAAAATGGCATCCCCAAAAGCTTCAAGTCGCAGATCATGGGGAAGGCACGACAAGAACGTGATGAAAACAGAGATGCTGATTTGGACTATATCCTCACTATTCTTCCCTTGGATCTTCAGACACGTATTAAAAATTGTATGCCTATGGCTAGGTTGAAGCAAGTGCCGATGTTGCAAAACATGAACGAACATGTATTGAGAAGCATTTGTTCGTATCTTAAGCACAGGGAGTTTGATGACAATTCTATCATTATTAAAAAGGGTGAACCACTTGAAATGATGCTATTCATTGTGGACGGACATGTATCCATTGAAAAGAGAGATGGTTCTTCTTCTAATAATAATTTGCAGCAACGAACTCGAGGTGCAGGAGAAGTATGTGGAGAAGAACTTCTACTTTCGCCATCGTGGATCTTATATCCTTGGTTCGAAAGACCCTTGGCAACCGAGTCTGCTAAGGCAATAGGTCATGTTGAAGCCCTTGTTCTCACGGCTAGCGACTTGGGGGGAGTGGTCAGAATGCACCATTTCGTTGGGATGATTCGTAGAATATTTCGTGCAAAAGAACTTGAGAAGGCAACAGAAAACTACCATGAAAATACAATCATTCATGAGGACAGGTATGCAACCTTTTACAAAGGGGTACTGCTCATGCCACCAGATGATGAAACAGTGGTTGCGATAAAGAAGTACACAGTTATTTATCATGGAGATGTAGCTATTGAGGCGGCTGTTGCTTCTCAGACCAAGCACATAAATGTGGTGAGGTTCTTAGGTGGTTGTCTGGAACCAGAGACACGAGCACTGGTTTTTGAGTACATTCCCAATGGCACACTTTTTGAGCACATTCATAAAGAAGAAGCAGCAGGCAGCTTTGTAGGATCATCATCGCCACCAACTACTCTACTTTCACTGGAGTTACGACTCAAGATTGCGTCAGAAACAGCTGGAGCACTAGCTTACTTACACTCATTCAGTCCGCCATACATACACCTATTTTTGTCGTCAAAACATATACTATTGGATCATCATTACACCGCAAAGTTGTCTGCCATTGGACTGTCGCTATATGAATTCTGGAATTTCGATTGTTCACTAAACTCGAGAGAATACTTTGATCCTTATTTTCAAGGAGACAGACTAGCAGAAAAGAGTGACGTCTATAGCTTTGGAGTTATCCTAGCGGAGCTACTAACAAGTCAAAAGCCAGCTTCTCCTAACAGCAAAGGGGAAGAGCCACCACTGGCAACCTCTCTTCTATCCTCAATGGAAGAGGGTCGCTTGAATCAAATTTTGGATGGTGAAATAATAGTCGATGAAACAACTTCTGAGACGGCCAAAAAGGAAAGGCCTTCCATGGAGCAAGTAGCCGTGGAGCTTGAGGGATTGCGCAAATTTATGGCAAAGTATCAAAGGGGAGAACCCAGTTTCTCAAACAGGCCAACCTCTTTGCAACCGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
Ion_trans Pkinase Pkinase_Tyr cNMP_binding

Protein Analysis

914

Amino Acids

105.35

Weight (kDa)

7.35

Isoelectric Point (pI)

49.19

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000017)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07351 FvH4_1g11800 FvH4_1g11800 FvH4_1g11800 FvH4_1g11800 FvH4_1g11800 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_4g14360 FvH4_6g13561 FvH4_6g13562 FvH4_6g13580 FvH4_6g13590 FvH4_6g13590 FvH4_6g13590 FvH4_6g13731 FvH4_6g13770 FvH4_6g13800 FvH4_6g13800 FvH4_6g13860 FvH4_6g13870 FvH4_6g13870 FvH4_6g13870 FvH4_6g13870 FvH4_6g13870 FvH4_6g13890 FvH4_6g33801 FvH4_7g13020 FvH4_7g13270 FvH4_7g13270 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g14580 FvH4_7g14580 FvH4_7g14580 FvH4_7g14600 FvH4_7g14600 FvH4_7g20030 FvH4_7g20510 FvH4_7g20510 FvH4_7g20510 FvH4_7g20670 FvH4_7g20670 FvH4_7g20670 FvH4_7g20670 FvH4_7g20690 FvH4_7g20690 FvH4_7g31930 FvH4_7g31930 FvH4_7g31940 FvH4_7g31940
malus_domestica MD01G1115700.v1.1 MD01G1115800.v1.1 MD01G1116600.v1.1 MD01G1116700.v1.1 MD01G1117000.v1.1 MD01G1225000.v1.1 MD02G1077900.v1.1 MD02G1078000.v1.1 MD02G1078200.v1.1 MD02G1078400.v1.1 MD02G1084300.v1.1 MD04G1004700.v1.1 MD04G1123100.v1.1 MD04G1123200.v1.1 MD04G1128000.v1.1 MD04G1128400.v1.1 MD05G1299700.v1.1 MD05G1300000.v1.1 MD07G1184000.v1.1 MD07G1292300.v1.1 MD08G1214800.v1.1
prunus_persica Prupe.1G205100_v2.0.a1 Prupe.1G205100_v2.0.a1 Prupe.1G205200_v2.0.a1 Prupe.2G222300_v2.0.a1 Prupe.2G223300_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223600_v2.0.a1 Prupe.2G223600_v2.0.a1 Prupe.2G223600_v2.0.a1 Prupe.2G223700_v2.0.a1 Prupe.2G223700_v2.0.a1 Prupe.2G223700_v2.0.a1 Prupe.2G223700_v2.0.a1 Prupe.2G223800_v2.0.a1 Prupe.2G223900_v2.0.a1 Prupe.2G224000_v2.0.a1 Prupe.5G162000_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G291000_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G210400_v2.0.a1 Prupe.7G210600_v2.0.a1 Prupe.7G210700_v2.0.a1 Prupe.7G210800_v2.0.a1 Prupe.7G210900_v2.0.a1 Prupe.8G097600_v2.0.a1 Prupe.8G097800_v2.0.a1 Prupe.8G097800_v2.0.a1
pyrus_communis pycom01g14430 pycom01g14440 pycom01g23130 pycom01g23160 pycom01g23330 pycom02g06210 pycom02g06220 pycom02g06250 pycom02g06270 pycom02g06710 pycom03g05360 pycom03g05380 pycom04g11470 pycom04g11480 pycom04g11520 pycom04g11560 pycom04g11600 pycom04g11610 pycom04g11650 pycom04g11660 pycom04g11670 pycom05g27790 pycom07g17630 pycom08g20960 pycom126g00020 pycom126g00030
rosa_chinensis RchiOBHm_Chr1g0318251 RchiOBHm_Chr1g0318731 RchiOBHm_Chr1g0339101 RchiOBHm_Chr1g0339111 RchiOBHm_Chr1g0347151 RchiOBHm_Chr1g0347161 RchiOBHm_Chr1g0347221 RchiOBHm_Chr1g0352401 RchiOBHm_Chr1g0352441 RchiOBHm_Chr1g0352461 RchiOBHm_Chr1g0356131 RchiOBHm_Chr1g0363991 RchiOBHm_Chr1g0364791 RchiOBHm_Chr1g0364801 RchiOBHm_Chr1g0364811 RchiOBHm_Chr1g0364851 RchiOBHm_Chr1g0364951 RchiOBHm_Chr1g0370821 RchiOBHm_Chr1g0381221 RchiOBHm_Chr1g0381231 RchiOBHm_Chr1g0381261 RchiOBHm_Chr1g0381271 RchiOBHm_Chr1g0381341 RchiOBHm_Chr1g0381351 RchiOBHm_Chr1g0381391 RchiOBHm_Chr1g0381801 RchiOBHm_Chr1g0381821 RchiOBHm_Chr2g0093241 RchiOBHm_Chr2g0116391 RchiOBHm_Chr3g0466441 RchiOBHm_Chr3g0466631 RchiOBHm_Chr3g0466651 RchiOBHm_Chr3g0496921 RchiOBHm_Chr4g0400441 RchiOBHm_Chr4g0400501 RchiOBHm_Chr4g0400511 RchiOBHm_Chr4g0400691 RchiOBHm_Chr4g0400701 RchiOBHm_Chr4g0404331 RchiOBHm_Chr5g0052101 RchiOBHm_Chr5g0052111 RchiOBHm_Chr5g0052171 RchiOBHm_Chr5g0052181 RchiOBHm_Chr6g0264161 RchiOBHm_Chr6g0265551 RchiOBHm_Chr7g0213571 RchiOBHm_Chr7g0213581
rosa_laevigata RLG00000002796 RLG00000003261 RLG00000007935 RLG00000007936 RLG00000009187 RLG00000014179 RLG00000016381 RLG00000018265 RLG00000024558 RLG00000024574 RLG00000026232 RLG00000026234 RLG00000026236 RLG00000026237 RLG00000027459 RLG00000027461 RLG00000027463 RLG00000027530 RLG00000028103 RLG00000028304 RLG00000028333 RLG00000029214 RLG00000029848 RLG00000029951 RLG00000030115 RLG00000030552 RLG00000033668 RLG00000034840 RLG00000034841 RLG00000034842 RLG00000035830
rosa_multiflora Rmu_sc0000654.1_g000004 Rmu_sc0000675.1_g000025 Rmu_sc0001075.1_g000002 Rmu_sc0001726.1_g000004 Rmu_sc0001772.1_g000061 Rmu_sc0001772.1_g000065 Rmu_sc0002067.1_g000002 Rmu_sc0002183.1_g000001 Rmu_sc0002183.1_g000006 Rmu_sc0002244.1_g000003 Rmu_sc0002313.1_g000004 Rmu_sc0002319.1_g000004 Rmu_sc0002539.1_g000085 Rmu_sc0002636.1_g000004 Rmu_sc0003229.1_g000007 Rmu_sc0003313.1_g000020 Rmu_sc0003546.1_g000007 Rmu_sc0003724.1_g000015 Rmu_sc0003936.1_g000029 Rmu_sc0004191.1_g000067 Rmu_sc0004525.1_g000012 Rmu_sc0005122.1_g000009 Rmu_sc0005255.1_g000040 Rmu_sc0005338.1_g000016 Rmu_sc0005584.1_g000008 Rmu_sc0006460.1_g000013 Rmu_sc0006872.1_g000011 Rmu_sc0006872.1_g000015 Rmu_sc0006872.1_g000016 Rmu_sc0006952.1_g000013 Rmu_sc0007342.1_g000005 Rmu_sc0007342.1_g000006 Rmu_sc0008418.1_g000003 Rmu_sc0008418.1_g000006 Rmu_sc0008636.1_g000007 Rmu_sc0008636.1_g000008 Rmu_sc0009205.1_g000014 Rmu_sc0009365.1_g000014 Rmu_sc0009917.1_g000002 Rmu_sc0019289.1_g000003 Rmu_ssc0000098.1_g000011 Rmu_ssc0000098.1_g000012 Rmu_ssc0000167.1_g000018 Rmu_ssc0000167.1_g000024 Rmu_ssc0000326.1_g000015
rosa_roxburghii Rroxscaffold_166G00440780 Rroxscaffold_176G00431500 Rroxscaffold_1G00015080 Rroxscaffold_1G00027880 Rroxscaffold_1G00027890 Rroxscaffold_1G00027920 Rroxscaffold_2G00127250 Rroxscaffold_2G00148380 Rroxscaffold_3G00219450 Rroxscaffold_3G00232170 Rroxscaffold_3G00232210 Rroxscaffold_3G00242230 Rroxscaffold_3G00242240 Rroxscaffold_3G00244790 Rroxscaffold_3G00245790 Rroxscaffold_4G00278400 Rroxscaffold_4G00278430 Rroxscaffold_4G00278670 Rroxscaffold_4G00278680 Rroxscaffold_4G00278690 Rroxscaffold_4G00278700 Rroxscaffold_4G00278720 Rroxscaffold_4G00291690 Rroxscaffold_4G00292070 Rroxscaffold_4G00292090 Rroxscaffold_4G00292770 Rroxscaffold_4G00302240 Rroxscaffold_4G00302860 Rroxscaffold_4G00311320 Rroxscaffold_4G00311330 Rroxscaffold_4G00320570 Rroxscaffold_4G00322050 Rroxscaffold_4G00329480 Rroxscaffold_4G00329730 Rroxscaffold_5G00345500 Rroxscaffold_5G00345510 Rroxscaffold_5G00360830 Rroxscaffold_5G00360840 Rroxscaffold_6G00393450 Rroxscaffold_6G00404030 Rroxscaffold_6G00414220 Rroxscaffold_6G00414230 Rroxscaffold_6G00414280 Rroxscaffold_6G00414290 Rroxscaffold_6G00414350 Rroxscaffold_6G00414470 Rroxscaffold_7G00202570 Rroxscaffold_7G00203460 Rroxscaffold_7G00203470
rosa_rugosa Rorug01G0020500 Rorug01G0020600 Rorug01G0020700 Rorug01G0143700.1 Rorug01G0225700 Rorug01G0228500 Rorug01G0228600 Rorug01G0228600 Rorug01G0228700 Rorug01G0228800 Rorug01G0228800 Rorug01G0229000 Rorug01G0229300 Rorug01G0229400 Rorug01G0229600 Rorug01G0229700 Rorug01G0232200 Rorug01G0232600 Rorug01G0232600 Rorug01G0311900 Rorug01G0311900 Rorug01G0318400 Rorug01G0318500 Rorug01G0318500 Rorug01G0318500 Rorug01G0427900 Rorug01G0427900 Rorug01G0428000 Rorug01G0428200 Rorug01G0428300 Rorug01G0428400 Rorug01G0431500 Rorug01G0431600 Rorug01G0431600 Rorug02G0033800 Rorug02G0206300 Rorug03G0081900 Rorug03G0083200 Rorug03G0083200 Rorug03G0083300 Rorug04G0025100 Rorug04G0025100 Rorug04G0025200 Rorug04G0025300 Rorug04G0058600 Rorug04G0058700 Rorug04G0058800 Rorug04G0098400 Rorug04G0098500 Rorug05G0274500 Rorug05G0274600 Rorug05G0274800 Rorug06G0008500 Rorug06G0009100 Rorug06G0018000
rosa_samantha Rh1AG031700 Rh1AG036100 Rh1AG089800 Rh1AG239800 Rh1AG239900 Rh1AG242000 Rh1AG242300 Rh1AG245600 Rh1AG262600 Rh1AG319700 Rh1AG319800 Rh1AG319900 Rh1AG327200 Rh1AG451100 Rh1AG451200 Rh1AG451300 Rh1AG451600 Rh1AG451700 Rh1BG027200 Rh1BG071600 Rh1BG090700 Rh1BG211000 Rh1BG213000 Rh1BG213500 Rh1BG282800 Rh1BG288400 Rh1BG408100 Rh1BG408200 Rh1BG408400 Rh1BG408700 Rh1CG026300 Rh1CG028300 Rh1CG224100 Rh1CG226000 Rh1CG226100 Rh1CG229300 Rh1CG229400 Rh1CG245900 Rh1CG299200 Rh1CG299400 Rh1CG299500 Rh1CG303300 Rh1CG305100 Rh1CG422500 Rh1CG422600 Rh1CG422700 Rh1CG422800 Rh1CG422900 Rh1CG423100 Rh1CG423300 Rh1CG423400 Rh1CG426300 Rh1CG426600 Rh1DG239300 Rh1DG239600 Rh1DG258300 Rh1DG314200 Rh1DG314300 Rh1DG314400 Rh1DG320000 Rh1DG439200 Rh1DG439400 Rh1DG439500 Rh1DG439700 Rh1DG440000 Rh1DG443800 Rh2AG261800 Rh2BG080900 Rh2CG083300 Rh2DG078900 Rh2DG270000 Rh2DG270100 Rh3AG128400 Rh3AG130100 Rh3AG130500 Rh3AG332500 Rh3AG332600 Rh3AG332800 Rh3BG149700 Rh3BG151500 Rh3CG151400 Rh3CG354500 Rh3CG366800 Rh3DG150500 Rh3DG152200 Rh4AG101400 Rh4AG102900 Rh4AG148300 Rh4AG148600 Rh4BG098000 Rh4CG111100 Rh4CG111300 Rh4CG155100 Rh4DG094800 Rh5AG213600 Rh5AG346900 Rh5AG347000 Rh5BG357500 Rh5BG357700 Rh5BG485400 Rh5CG383100 Rh5CG383200 Rh5CG383300 Rh5CG509900 Rh5DG373000 Rh5DG373200 Rh6BG054300 Rh6BG126300 Rh6CG125100 Rh6CG185300 Rh6DG177000 Rh7AG276100 Rh7AG276200 Rh7BG230500 Rh7BG270500 Rh7BG364000 Rh7CG250100 Rh7CG295200 Rh7CG295300 Rh7DG389700
rosa_wichuraiana Rw0G001190 Rw0G010680 Rw0G013360 Rw0G014310 Rw0G014890 Rw0G020310 Rw0G021350 Rw0G022510 Rw1G003360 Rw1G004330 Rw1G006930 Rw1G008310 Rw1G021090 Rw1G021150 Rw1G021210 Rw1G023200 Rw1G023210 Rw1G028340 Rw1G028350 Rw1G028990 Rw1G032510 Rw1G039370 Rw1G039400 Rw1G039410 Rw1G039420 Rw1G039430 Rw2G006700 Rw2G020550 Rw2G020580 Rw3G012130 Rw3G012300 Rw3G012310 Rw3G028220 Rw3G029230 Rw5G021600 Rw5G032790 Rw6G011240 Rw7G027670 Rw7G032780

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 2442
Acc16I TGCGCA 1 cut(s) 2672
AccB1I GGYRCC 1 cut(s) 623
AccB7I CCANNNNNTGG 1 cut(s) 666
AccBSI CCGCTC 1 cut(s) 173
AccI GTMKAC 2 cut(s) 277, 820
AccII CGCG 2 cut(s) 502, 1083
AciI CCGC 8 cut(s) 171, 241, 389, 500, 2009, 2261, 2319, 2465
AclWI GGATC 8 cut(s) 89, 102, 1224, 1401, 1700, 2170, 2313, 2393
AcoI YGGCCR 2 cut(s) 657, 2616
AcuI CTGAAG 2 cut(s) 1205, 1382
AcyI GRCGYC 1 cut(s) 2439
AfaI GTAC 6 cut(s) 618, 635, 1152, 1926, 1973, 2099
AfiI CCNNNNNNNGG 3 cut(s) 27, 28, 666
AflII CTTAAG 1 cut(s) 1499
AflIII ACRYGT 4 cut(s) 1226, 1403, 1471, 1582
AhlI ACTAGT 1 cut(s) 704
AjuI GAANNNNNNNTTGG 2 cut(s) 2558, 2590
AluBI AGCT 9 cut(s) 1302, 2000, 2154, 2228, 2240, 2448, 2470, 2492, 2659
AluI AGCT 9 cut(s) 1302, 2000, 2154, 2228, 2240, 2448, 2470, 2492, 2659
Alw21I GWGCWC 3 cut(s) 2086, 2127, 2236
Alw26I GTCTC 4 cut(s) 1079, 2069, 2409, 2606
AlwI GGATC 8 cut(s) 89, 102, 1224, 1401, 1700, 2170, 2313, 2393
Ama87I CYCGRG 2 cut(s) 1641, 2383
AoxI GGCC 4 cut(s) 657, 2616, 2630, 2720
ApeKI GCWGC 4 cut(s) 941, 1630, 2144, 2151
Asp700I GAANNNNTTC 1 cut(s) 1671
AspLEI GCGC 2 cut(s) 1036, 2673
AsuC2I CCSGG 1 cut(s) 825
AsuHPI GGTGA 3 cut(s) 1556, 2056, 2594
AsuII TTCGAA 1 cut(s) 1710
AsuNHI GCTAGC 1 cut(s) 1775
AvaI CYCGRG 2 cut(s) 1641, 2383
BalI TGGCCA 1 cut(s) 659
BamHI GGATCC 1 cut(s) 94
BanI GGYRCC 1 cut(s) 623
BarI GAAGNNNNNNTAC 2 cut(s) 1659, 1691
BauI CACGAG 1 cut(s) 2079
Bbv12I GWGCWC 3 cut(s) 2086, 2127, 2236
BbvI GCAGC 4 cut(s) 953, 1642, 2156, 2163
BceAI ACGGC 3 cut(s) 1788, 2631, 2636
BcgI CGANNNNNNTGC 4 cut(s) 251, 285, 1622, 1656
BciVI GTATCC 2 cut(s) 1009, 1597
BcnI CCSGG 1 cut(s) 825
BcoDI GTCTC 4 cut(s) 1079, 2069, 2409, 2606
BcuI ACTAGT 1 cut(s) 704
BfaI CTAG 8 cut(s) 609, 705, 912, 1431, 1776, 2237, 2423, 2462
BfmI CTRYAG 1 cut(s) 2443
BfrI CTTAAG 1 cut(s) 1499
BfuI GTATCC 2 cut(s) 1009, 1597
BglII AGATCT 1 cut(s) 440
BisI GCNGC 6 cut(s) 171, 942, 1631, 2010, 2145, 2152
BlsI GCNGC 6 cut(s) 172, 943, 1632, 2011, 2146, 2153
Bme1390I CCNGG 1 cut(s) 825
BmeT110I CYCGRG 2 cut(s) 1641, 2383
BmiI GGNNCC 3 cut(s) 96, 625, 2070
BmrFI CCNGG 1 cut(s) 825
BmrI ACTGGG 1 cut(s) 2700
BmsI GCATC 7 cut(s) 77, 664, 1122, 1168, 1299, 1345, 1551
BmtI GCTAGC 1 cut(s) 1779
BmuI ACTGGG 1 cut(s) 2700
BpmI CTGGAG 3 cut(s) 573, 2216, 2250
Bpu10I CCTNAGC 1 cut(s) 1737
Bpu14I TTCGAA 1 cut(s) 1710
BpuEI CTTGAG 5 cut(s) 457, 926, 1871, 2192, 2681
BpuMI CCSGG 1 cut(s) 825
BsaAI YACGTR 2 cut(s) 1229, 1406
BsaBI GATNNNNATC 2 cut(s) 563, 2167
BsaHI GRCGYC 1 cut(s) 2439
BsaJI CCNNGG 8 cut(s) 26, 824, 1212, 1389, 1703, 1719, 2637, 2652
Bsc4I CCNNNNNNNGG 3 cut(s) 27, 28, 666
Bse1I ACTGG 8 cut(s) 53, 556, 779, 964, 2091, 2199, 2529, 2706
Bse8I GATNNNNATC 2 cut(s) 563, 2167
BseDI CCNNGG 8 cut(s) 26, 824, 1212, 1389, 1703, 1719, 2637, 2652
BseJI GATNNNNATC 2 cut(s) 563, 2167
BseLI CCNNNNNNNGG 3 cut(s) 27, 28, 666
BseMII CTCAG 3 cut(s) 419, 2036, 2601
BseNI ACTGG 8 cut(s) 53, 556, 779, 964, 2091, 2199, 2529, 2706
BseXI GCAGC 4 cut(s) 953, 1642, 2156, 2163
BsgI GTGCAG 2 cut(s) 1016, 1668
Bsh1236I CGCG 2 cut(s) 502, 1083
BshFI GGCC 4 cut(s) 659, 2618, 2632, 2722
BshNI GGYRCC 1 cut(s) 623
BsiHKAI GWGCWC 3 cut(s) 2086, 2127, 2236
BsiHKCI CYCGRG 2 cut(s) 1641, 2383
BsiSI CCGG 1 cut(s) 824
BslFI GGGAC 1 cut(s) 885
BslI CCNNNNNNNGG 3 cut(s) 27, 28, 666
BsmAI GTCTC 4 cut(s) 1079, 2069, 2409, 2606
BsmBI CGTCTC 1 cut(s) 2606
BsmFI GGGAC 1 cut(s) 885
BsmI GAATGC 1 cut(s) 1806
BsnI GGCC 4 cut(s) 659, 2618, 2632, 2722
BsoBI CYCGRG 2 cut(s) 1641, 2383
Bsp119I TTCGAA 1 cut(s) 1710
Bsp1286I GDGCHC 3 cut(s) 2086, 2127, 2236
Bsp19I CCATGG 1 cut(s) 2637
Bsp68I TCGCGA 1 cut(s) 1083
BspACI CCGC 8 cut(s) 171, 241, 389, 500, 2009, 2261, 2319, 2465
BspANI GGCC 4 cut(s) 659, 2618, 2632, 2722
BspCNI CTCAG 3 cut(s) 420, 2035, 2602
BspFNI CGCG 2 cut(s) 502, 1083
BspHI TCATGA 2 cut(s) 13, 1891
BspLI GGNNCC 3 cut(s) 96, 625, 2070
BspOI GCTAGC 1 cut(s) 1779
BspPI GGATC 8 cut(s) 89, 102, 1224, 1401, 1700, 2170, 2313, 2393
BspQI GCTCTTC 2 cut(s) 180, 2508
BspT104I TTCGAA 1 cut(s) 1710
BspT107I GGYRCC 1 cut(s) 623
BspTI CTTAAG 1 cut(s) 1499
BsrBI CCGCTC 1 cut(s) 173
BsrI ACTGG 8 cut(s) 53, 556, 779, 964, 2091, 2199, 2529, 2706
BssECI CCNNGG 8 cut(s) 26, 824, 1212, 1389, 1703, 1719, 2637, 2652
BssNAI GTATAC 1 cut(s) 821
BssNI GRCGYC 1 cut(s) 2439
BssSI CACGAG 1 cut(s) 2079
BssT1I CCWWGG 6 cut(s) 26, 1212, 1389, 1703, 1719, 2637
Bst1107I GTATAC 1 cut(s) 821
Bst2BI CACGAG 1 cut(s) 2079
Bst4CI ACNGT 5 cut(s) 805, 1954, 1978, 2343, 2739
Bst6I CTCTTC 6 cut(s) 180, 1065, 1248, 2508, 2541, 2547
BstACI GRCGYC 1 cut(s) 2439
BstAFI CTTAAG 1 cut(s) 1499
BstBAI YACGTR 2 cut(s) 1229, 1406
BstBI TTCGAA 1 cut(s) 1710
BstC8I GCNNGC 4 cut(s) 143, 1777, 2149, 2490
BstDEI CTNAG 6 cut(s) 336, 428, 1737, 2022, 2053, 2610
BstDSI CCRYGG 2 cut(s) 2637, 2652
BstFNI CGCG 2 cut(s) 502, 1083
BstHHI GCGC 2 cut(s) 1036, 2673
BstMAI GTCTC 4 cut(s) 1079, 2069, 2409, 2606
BstMWI GCNNNNNNNGC 3 cut(s) 1453, 2006, 2015
BstNSI RCATGY 4 cut(s) 681, 1009, 1475, 1586
BstSCI CCNGG 1 cut(s) 823
BstSFI CTRYAG 1 cut(s) 2443
BstUI CGCG 2 cut(s) 502, 1083
BstV1I GCAGC 4 cut(s) 953, 1642, 2156, 2163
BstX2I RGATCY 5 cut(s) 94, 440, 1216, 1393, 1692
BstXI CCANNNNNNTGG 1 cut(s) 1814
BstYI RGATCY 5 cut(s) 94, 440, 1216, 1393, 1692
BstZ17I GTATAC 1 cut(s) 821
BsuI GTATCC 2 cut(s) 1009, 1597
BsuRI GGCC 4 cut(s) 659, 2618, 2632, 2722
BtgI CCRYGG 2 cut(s) 2637, 2652
BtgZI GCGATG 1 cut(s) 2154
BtsIMutI CAGTG 6 cut(s) 192, 786, 1959, 2084, 2192, 2522
BtuMI TCGCGA 1 cut(s) 1083
Cac8I GCNNGC 4 cut(s) 143, 1777, 2149, 2490
CciI TCATGA 2 cut(s) 13, 1891
CfoI GCGC 2 cut(s) 1036, 2673
CseI GACGC 1 cut(s) 2205
Csp6I GTAC 6 cut(s) 617, 634, 1151, 1925, 1972, 2098
CviQI GTAC 6 cut(s) 617, 634, 1151, 1925, 1972, 2098
DdeI CTNAG 6 cut(s) 336, 428, 1737, 2022, 2053, 2610
DraI TTTAAA 1 cut(s) 538
EaeI YGGCCR 2 cut(s) 657, 2616
Eam1104I CTCTTC 6 cut(s) 180, 1065, 1248, 2508, 2541, 2547
EarI CTCTTC 6 cut(s) 180, 1065, 1248, 2508, 2541, 2547
EciI GGCGGA 1 cut(s) 2250
Eco130I CCWWGG 6 cut(s) 26, 1212, 1389, 1703, 1719, 2637
Eco147I AGGCCT 1 cut(s) 2632
Eco32I GATATC 1 cut(s) 133
Eco57I CTGAAG 2 cut(s) 1205, 1382
Eco88I CYCGRG 2 cut(s) 1641, 2383
EcoRI GAATTC 1 cut(s) 2354
EcoRV GATATC 1 cut(s) 133
EcoT14I CCWWGG 6 cut(s) 26, 1212, 1389, 1703, 1719, 2637
EcoT22I ATGCAT 2 cut(s) 264, 679
ErhI CCWWGG 6 cut(s) 26, 1212, 1389, 1703, 1719, 2637
Esp3I CGTCTC 1 cut(s) 2606
FalI AAGNNNNNCTT 2 cut(s) 19, 51
FaqI GGGAC 1 cut(s) 885
FauI CCCGC 1 cut(s) 248
FauNDI CATATG 1 cut(s) 629
FblI GTMKAC 2 cut(s) 277, 820
Fnu4HI GCNGC 6 cut(s) 171, 942, 1631, 2010, 2145, 2152
Fsp4HI GCNGC 6 cut(s) 171, 942, 1631, 2010, 2145, 2152
FspBI CTAG 8 cut(s) 609, 705, 912, 1431, 1776, 2237, 2423, 2462
FspI TGCGCA 1 cut(s) 2672
GlaI GCGC 2 cut(s) 1035, 2672
GluI GCNGC 6 cut(s) 171, 942, 1631, 2010, 2145, 2152
GsuI CTGGAG 3 cut(s) 573, 2216, 2250
HaeIII GGCC 4 cut(s) 659, 2618, 2632, 2722
HapII CCGG 1 cut(s) 824
HgaI GACGC 1 cut(s) 2205
HhaI GCGC 2 cut(s) 1036, 2673
Hin1I GRCGYC 1 cut(s) 2439
Hin6I GCGC 2 cut(s) 1034, 2671
HinP1I GCGC 2 cut(s) 1034, 2671
HincII GTYRAC 1 cut(s) 831
HindII GTYRAC 1 cut(s) 831
HindIII AAGCTT 1 cut(s) 1300
HinfI GANTC 6 cut(s) 17, 32, 1730, 1822, 2205, 2566
HpaII CCGG 1 cut(s) 824
HphI GGTGA 3 cut(s) 1556, 2056, 2594
Hpy166II GTNNAC 7 cut(s) 278, 821, 831, 1547, 1576, 1974, 2375
Hpy188I TCNGA 7 cut(s) 253, 1224, 1401, 1799, 2025, 2221, 2611
Hpy8I GTNNAC 7 cut(s) 278, 821, 831, 1547, 1576, 1974, 2375
Hpy99I CGWCG 1 cut(s) 276
HpyAV CCTTC 8 cut(s) 32, 50, 118, 818, 1141, 1318, 1849, 2643
HpyCH4III ACNGT 5 cut(s) 805, 1954, 1978, 2343, 2739
HpyCH4IV ACGT 5 cut(s) 111, 1228, 1339, 1405, 2439
HpyF10VI GCNNNNNNNGC 3 cut(s) 1453, 2006, 2015
HpyF3I CTNAG 6 cut(s) 336, 428, 1737, 2022, 2053, 2610
HpySE526I ACGT 5 cut(s) 111, 1228, 1339, 1405, 2439
Hsp92I GRCGYC 1 cut(s) 2439
HspAI GCGC 2 cut(s) 1034, 2671
LguI GCTCTTC 2 cut(s) 180, 2508
LmnI GCTCC 4 cut(s) 2231, 2467, 2641, 2656
Lsp1109I GCAGC 4 cut(s) 953, 1642, 2156, 2163
LweI GCATC 7 cut(s) 77, 664, 1122, 1168, 1299, 1345, 1551
MaeI CTAG 8 cut(s) 609, 705, 912, 1431, 1776, 2237, 2423, 2462
MaeII ACGT 5 cut(s) 111, 1228, 1339, 1405, 2439
MaeIII GTNAC 5 cut(s) 463, 698, 722, 2199, 2435
MbiI CCGCTC 1 cut(s) 173
MfeI CAATTG 1 cut(s) 856
MflI RGATCY 5 cut(s) 94, 440, 1216, 1393, 1692
MhlI GDGCHC 3 cut(s) 2086, 2127, 2236
MlsI TGGCCA 1 cut(s) 659
MluNI TGGCCA 1 cut(s) 659
MlyI GAGTC 3 cut(s) 41, 1739, 2199
MmeI TCCRAC 1 cut(s) 993
Mox20I TGGCCA 1 cut(s) 659
Mph1103I ATGCAT 2 cut(s) 264, 679
MroXI GAANNNNTTC 1 cut(s) 1671
MscI TGGCCA 1 cut(s) 659
MseI TTAA 8 cut(s) 182, 365, 537, 573, 1233, 1410, 1500, 1536
MslI CAYNNNNRTG 3 cut(s) 1992, 2037, 2039
Msp20I TGGCCA 1 cut(s) 659
MspA1I CMGCKG 1 cut(s) 2228
MspCI CTTAAG 1 cut(s) 1499
MspI CCGG 1 cut(s) 824
MspR9I CCNGG 1 cut(s) 825
MunI CAATTG 1 cut(s) 856
Mva1269I GAATGC 1 cut(s) 1806
MvnI CGCG 2 cut(s) 502, 1083
MwoI GCNNNNNNNGC 3 cut(s) 1453, 2006, 2015
NciI CCSGG 1 cut(s) 825
NcoI CCATGG 1 cut(s) 2637
NdeI CATATG 1 cut(s) 629
NheI GCTAGC 1 cut(s) 1775
NlaIV GGNNCC 3 cut(s) 96, 625, 2070
NmuCI GTSAC 2 cut(s) 722, 2435
NruI TCGCGA 1 cut(s) 1083
NsbI TGCGCA 1 cut(s) 2672
NsiI ATGCAT 2 cut(s) 264, 679
NspI RCATGY 4 cut(s) 681, 1009, 1475, 1586
NspV TTCGAA 1 cut(s) 1710
PaeR7I CTCGAG 2 cut(s) 1641, 2383
PagI TCATGA 2 cut(s) 13, 1891
PceI AGGCCT 1 cut(s) 2632
PciI ACATGT 2 cut(s) 1471, 1582
PciSI GCTCTTC 2 cut(s) 180, 2508
PcsI WCGNNNNNNNCGW 1 cut(s) 1336
PctI GAATGC 1 cut(s) 1806
PdmI GAANNNNTTC 1 cut(s) 1671
PfeI GAWTC 3 cut(s) 17, 1822, 2566
PflMI CCANNNNNTGG 1 cut(s) 666
PkrI GCNGC 6 cut(s) 172, 943, 1632, 2011, 2146, 2153
PleI GAGTC 3 cut(s) 40, 1738, 2199
PpsI GAGTC 3 cut(s) 40, 1738, 2199
Ppu21I YACGTR 2 cut(s) 1229, 1406
PscI ACATGT 2 cut(s) 1471, 1582
PspN4I GGNNCC 3 cut(s) 96, 625, 2070
PspXI VCTCGAGB 1 cut(s) 1641
PsuI RGATCY 5 cut(s) 94, 440, 1216, 1393, 1692
PvuII CAGCTG 1 cut(s) 2228
RruI TCGCGA 1 cut(s) 1083
RsaI GTAC 6 cut(s) 618, 635, 1152, 1926, 1973, 2099
RsaNI GTAC 6 cut(s) 617, 634, 1151, 1925, 1972, 2098
RseI CAYNNNNRTG 3 cut(s) 1992, 2037, 2039
SapI GCTCTTC 2 cut(s) 180, 2508
SaqAI TTAA 8 cut(s) 182, 365, 537, 573, 1233, 1410, 1500, 1536
SatI GCNGC 6 cut(s) 171, 942, 1631, 2010, 2145, 2152
SchI GAGTC 3 cut(s) 41, 1739, 2199
ScrFI CCNGG 1 cut(s) 825
SduI GDGCHC 3 cut(s) 2086, 2127, 2236
SfaNI GCATC 7 cut(s) 77, 664, 1122, 1168, 1299, 1345, 1551
SfcI CTRYAG 1 cut(s) 2443
Sfr274I CTCGAG 2 cut(s) 1641, 2383
SfuI TTCGAA 1 cut(s) 1710
SlaI CTCGAG 2 cut(s) 1641, 2383
SmiMI CAYNNNNRTG 3 cut(s) 1992, 2037, 2039
SmlI CTYRAG 8 cut(s) 436, 905, 1499, 1641, 1850, 2207, 2383, 2660
SmoI CTYRAG 8 cut(s) 436, 905, 1499, 1641, 1850, 2207, 2383, 2660
SpeI ACTAGT 1 cut(s) 704
SseBI AGGCCT 1 cut(s) 2632
SsiI CCGC 8 cut(s) 171, 241, 389, 500, 2009, 2261, 2319, 2465
SspI AATATT 2 cut(s) 745, 1833
SspMI CTAG 8 cut(s) 609, 705, 912, 1431, 1776, 2237, 2423, 2462
StuI AGGCCT 1 cut(s) 2632
StyD4I CCNGG 1 cut(s) 823
StyI CCWWGG 6 cut(s) 26, 1212, 1389, 1703, 1719, 2637
TaaI ACNGT 5 cut(s) 805, 1954, 1978, 2343, 2739
TaiI ACGT 5 cut(s) 114, 1231, 1342, 1408, 2442
TaqI TCGA 7 cut(s) 293, 682, 1642, 1710, 2367, 2384, 2595
TatI WGTACW 3 cut(s) 616, 1971, 2097
TauI GCSGC 2 cut(s) 173, 2012
TfiI GAWTC 3 cut(s) 17, 1822, 2566
Tru1I TTAA 8 cut(s) 182, 365, 537, 573, 1233, 1410, 1500, 1536
Tru9I TTAA 8 cut(s) 182, 365, 537, 573, 1233, 1410, 1500, 1536
TscAI CASTG 6 cut(s) 199, 786, 1959, 2091, 2199, 2529
TseFI GTSAC 2 cut(s) 722, 2435
TseI GCWGC 4 cut(s) 941, 1630, 2144, 2151
Tsp45I GTSAC 2 cut(s) 722, 2435
TspGWI ACGGA 2 cut(s) 667, 1593
TspRI CASTG 6 cut(s) 199, 786, 1959, 2091, 2199, 2529
Van91I CCANNNNNTGG 1 cut(s) 666
Vha464I CTTAAG 1 cut(s) 1499
XceI RCATGY 4 cut(s) 681, 1009, 1475, 1586
XhoI CTCGAG 2 cut(s) 1641, 2383
XmiI GTMKAC 2 cut(s) 277, 820
XmnI GAANNNNTTC 1 cut(s) 1671
XspI CTAG 8 cut(s) 609, 705, 912, 1431, 1776, 2237, 2423, 2462
ZraI GACGTC 1 cut(s) 2440
Zsp2I ATGCAT 2 cut(s) 264, 679
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.