RLG00000018265

Cyclic nucleotide-gated ion channel 1-like

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
Physical Location & Seq
Reverse (-)
27736148 .. 27742749
6602 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000018265

Sequence Viewer

Length: 2358 bp
ATGGGCGACTTCCGCAACAATGACTCGTTTGTGATAGATATCCCAGAATACTGGGGATTAGTGGCCGGGGAATCTACGGTGAATGGTAAATCAATGAAAAAATTGCCTACAACAAAGGACATTCTTGATCCGGAGGGGACATTCTTTCCAATGTGGAATAAAATATTTGTGATAGCGTGTGTAGTTGCTGTCTTATCAGATCCTTTGTTTTTGTACATTCCTATCCTCAAAGATGATATGAAGTGCCTGGGATTTGATGCAAAGTTGAAGAAAGTAACTCTTGTCTCAAGATCAGTAACAGATCTGTTTTATGTCGTGGACATTATTTTGCAAAGTTGTAGCAGACTTACTGCCAAGACATTTGCAGCCTCGTGGATATCGATAACTGAAGAGGCATTTCCTTTGAAAGGAGAGAAATCAGTTAAGGATGCTCTGGCATTAGCCAAAAGGATTTCGCTCTCATATATTCTAATTGACATTTTAGCTGTTCTTCCTTGTCCGCAGGTGGTGATTCTCATGTTCTTTTCAAAAGTGAGGGCCTCAAAACCTTCGGTTACAAGGATATTTCTGAACTCTCTTGTTCTGTTCCAATATGTGCCACGAGTTCTCCGCATCTACCTCTCAGGCAAGGCTCCTAGCATAGAGAGCGGAATAGGACTATGGATTAAAGGCGTGTTCAATTTTTTTCCCTTCTTCCTTGCTGGTCATGTACTTGGAGCAATTTGGTACTTTTTTGCTATTCAACGAGAGACAGCTTGCTGGGTATATGCTTGTCAAGGTCAAAGCGGATGTGAGCCCAGTACTTTTAATTGTGACAACAATGTGTTCAGAAATATCACACACCTCAATTCTTTTTGCCCCAAAAACCCACCAAACACTGCACTGTTCGATTTTGGCATATTTCTTGATGCTCTTCAGTCTGGTATGTTGGAGTCAACAGATTTTCCACAAAAGTTGCTGCAATGTTTCTGGTGGGGCCTGCGAAATTTGAGCATCTTTAGTTTGATAGTTCGGATTGAAAGATTAGTGCAGTGTTTAGCTCAATACAACACAAAAAGATCAGACAATCTTCGATTCAGACGGAAAATGCAAATCATAAATCCAGAAATTGATTTGTGGTTACATAAAAATGGTCTTCCTAAAGATCTGAAGATGGGAATAATGGATAATGTGCAACAAAAACTTGAAGAAAACAAAGATGTTCATGTCGAAAATATCCTCTCTATTCTTCCCTTGAAACATAAAAGACATATTATGCGACTTCTCCGCTTGGCTTCGCTAAGGAAAGTATCAATGCTTAAGCATATGGATGAACAAGTGTTGAATGCAATCTGTGAGCATCTTAAACCTGTGATATATGCCGAGGACAGCTATATTATTCGGGAGGGGGAACCACTTGAGAAAATGATCTTCATCACACAAGGCATTGCATGGACCTATGCAACTAATATTGGTGGTGTAAGTAGTAGTTCGTCAAACATTGATTGCCTTGAGAAAGGTGATTTTTATGGAGAAGAACTTCTTAATTGGGCATTTAATTTTGCCTCCTTTTCGGAGTTACCTATCTCGAGCAGAACTGTTAAGTCCCAAAGAAAACTTGAAGCATTTGCTATCAGGGCTAACGACTTGCATAGTGTTGTCTCTAAATTCTGGTGGCATTTTAGCTTGGAGCTTGAACCTGATAATCAACCAAGGAGGCGAGAACATTTGGCAACTTCTTGTTTACAGAAAACGTGGCGCCGGTATCATGCAGGGCCTAGGGGTGGAACTGGGGATTTAACAACCGGCCATGTTCTAGATATTGTGTTGTCTCCCAATCTCAGAGCCCCAAGTTTATTTTTCAGACATTCACCAACAGAAACAAGCCACAGCTTAGCAAAGATCAGCAACAAGATCGTACTGGATGGCATATCTGTTACCGCTTCTCTTCCTTTCTTCCAAATCCAGCCTCTGCTAATTGAACCATTCAGTATACCAGATTTAATGGAGGGGGAAACTACCATGGTCGTTGGAGGTCATAGATCAAGGAGAAAATGGCGAACAACAAAAGAAATTCTCGATCCGCAGAGACCATATCTTCCTATTGGATTTGCTGTCTTCCTGGATCTGTTGTTTTTGTACATTCCTATTATCAACGAGGATATGAAGTGCCTGGGATTTGACACATATCGGCTATCTTATAGTACTTGGAGCATTTTGGTATTTTTTTTCCATTCAACAAGAGACGCTGCTTGCTTGGAATATGCAAACCCAGTACTTTTGACAGTCACAACAATATCCTCAGAAATATCACACTTCTATATGGTGCCAATGCTTCAAAATATGGATCAACAAACAAGTGTTGGAAGCAATTTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

786

Amino Acids

89.53

Weight (kDa)

8.68

Isoelectric Point (pI)

49.97

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000017)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07351 FvH4_1g11800 FvH4_1g11800 FvH4_1g11800 FvH4_1g11800 FvH4_1g11800 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_4g14360 FvH4_6g13561 FvH4_6g13562 FvH4_6g13580 FvH4_6g13590 FvH4_6g13590 FvH4_6g13590 FvH4_6g13731 FvH4_6g13770 FvH4_6g13800 FvH4_6g13800 FvH4_6g13860 FvH4_6g13870 FvH4_6g13870 FvH4_6g13870 FvH4_6g13870 FvH4_6g13870 FvH4_6g13890 FvH4_6g33801 FvH4_7g13020 FvH4_7g13270 FvH4_7g13270 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g14580 FvH4_7g14580 FvH4_7g14580 FvH4_7g14600 FvH4_7g14600 FvH4_7g20030 FvH4_7g20510 FvH4_7g20510 FvH4_7g20510 FvH4_7g20670 FvH4_7g20670 FvH4_7g20670 FvH4_7g20670 FvH4_7g20690 FvH4_7g20690 FvH4_7g31930 FvH4_7g31930 FvH4_7g31940 FvH4_7g31940
malus_domestica MD01G1115700.v1.1 MD01G1115800.v1.1 MD01G1116600.v1.1 MD01G1116700.v1.1 MD01G1117000.v1.1 MD01G1225000.v1.1 MD02G1077900.v1.1 MD02G1078000.v1.1 MD02G1078200.v1.1 MD02G1078400.v1.1 MD02G1084300.v1.1 MD04G1004700.v1.1 MD04G1123100.v1.1 MD04G1123200.v1.1 MD04G1128000.v1.1 MD04G1128400.v1.1 MD05G1299700.v1.1 MD05G1300000.v1.1 MD07G1184000.v1.1 MD07G1292300.v1.1 MD08G1214800.v1.1
prunus_persica Prupe.1G205100_v2.0.a1 Prupe.1G205100_v2.0.a1 Prupe.1G205200_v2.0.a1 Prupe.2G222300_v2.0.a1 Prupe.2G223300_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223600_v2.0.a1 Prupe.2G223600_v2.0.a1 Prupe.2G223600_v2.0.a1 Prupe.2G223700_v2.0.a1 Prupe.2G223700_v2.0.a1 Prupe.2G223700_v2.0.a1 Prupe.2G223700_v2.0.a1 Prupe.2G223800_v2.0.a1 Prupe.2G223900_v2.0.a1 Prupe.2G224000_v2.0.a1 Prupe.5G162000_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G291000_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G210400_v2.0.a1 Prupe.7G210600_v2.0.a1 Prupe.7G210700_v2.0.a1 Prupe.7G210800_v2.0.a1 Prupe.7G210900_v2.0.a1 Prupe.8G097600_v2.0.a1 Prupe.8G097800_v2.0.a1 Prupe.8G097800_v2.0.a1
pyrus_communis pycom01g14430 pycom01g14440 pycom01g23130 pycom01g23160 pycom01g23330 pycom02g06210 pycom02g06220 pycom02g06250 pycom02g06270 pycom02g06710 pycom03g05360 pycom03g05380 pycom04g11470 pycom04g11480 pycom04g11520 pycom04g11560 pycom04g11600 pycom04g11610 pycom04g11650 pycom04g11660 pycom04g11670 pycom05g27790 pycom07g17630 pycom08g20960 pycom126g00020 pycom126g00030
rosa_chinensis RchiOBHm_Chr1g0318251 RchiOBHm_Chr1g0318731 RchiOBHm_Chr1g0339101 RchiOBHm_Chr1g0339111 RchiOBHm_Chr1g0347151 RchiOBHm_Chr1g0347161 RchiOBHm_Chr1g0347221 RchiOBHm_Chr1g0352401 RchiOBHm_Chr1g0352441 RchiOBHm_Chr1g0352461 RchiOBHm_Chr1g0356131 RchiOBHm_Chr1g0363991 RchiOBHm_Chr1g0364791 RchiOBHm_Chr1g0364801 RchiOBHm_Chr1g0364811 RchiOBHm_Chr1g0364851 RchiOBHm_Chr1g0364951 RchiOBHm_Chr1g0370821 RchiOBHm_Chr1g0381221 RchiOBHm_Chr1g0381231 RchiOBHm_Chr1g0381261 RchiOBHm_Chr1g0381271 RchiOBHm_Chr1g0381341 RchiOBHm_Chr1g0381351 RchiOBHm_Chr1g0381391 RchiOBHm_Chr1g0381801 RchiOBHm_Chr1g0381821 RchiOBHm_Chr2g0093241 RchiOBHm_Chr2g0116391 RchiOBHm_Chr3g0466441 RchiOBHm_Chr3g0466631 RchiOBHm_Chr3g0466651 RchiOBHm_Chr3g0496921 RchiOBHm_Chr4g0400441 RchiOBHm_Chr4g0400501 RchiOBHm_Chr4g0400511 RchiOBHm_Chr4g0400691 RchiOBHm_Chr4g0400701 RchiOBHm_Chr4g0404331 RchiOBHm_Chr5g0052101 RchiOBHm_Chr5g0052111 RchiOBHm_Chr5g0052171 RchiOBHm_Chr5g0052181 RchiOBHm_Chr6g0264161 RchiOBHm_Chr6g0265551 RchiOBHm_Chr7g0213571 RchiOBHm_Chr7g0213581
rosa_laevigata RLG00000002796 RLG00000003261 RLG00000007935 RLG00000007936 RLG00000009187 RLG00000014179 RLG00000016381 RLG00000018265 RLG00000024558 RLG00000024574 RLG00000026232 RLG00000026234 RLG00000026236 RLG00000026237 RLG00000027459 RLG00000027461 RLG00000027463 RLG00000027530 RLG00000028103 RLG00000028304 RLG00000028333 RLG00000029214 RLG00000029848 RLG00000029951 RLG00000030115 RLG00000030552 RLG00000033668 RLG00000034840 RLG00000034841 RLG00000034842 RLG00000035830
rosa_multiflora Rmu_sc0000654.1_g000004 Rmu_sc0000675.1_g000025 Rmu_sc0001075.1_g000002 Rmu_sc0001726.1_g000004 Rmu_sc0001772.1_g000061 Rmu_sc0001772.1_g000065 Rmu_sc0002067.1_g000002 Rmu_sc0002183.1_g000001 Rmu_sc0002183.1_g000006 Rmu_sc0002244.1_g000003 Rmu_sc0002313.1_g000004 Rmu_sc0002319.1_g000004 Rmu_sc0002539.1_g000085 Rmu_sc0002636.1_g000004 Rmu_sc0003229.1_g000007 Rmu_sc0003313.1_g000020 Rmu_sc0003546.1_g000007 Rmu_sc0003724.1_g000015 Rmu_sc0003936.1_g000029 Rmu_sc0004191.1_g000067 Rmu_sc0004525.1_g000012 Rmu_sc0005122.1_g000009 Rmu_sc0005255.1_g000040 Rmu_sc0005338.1_g000016 Rmu_sc0005584.1_g000008 Rmu_sc0006460.1_g000013 Rmu_sc0006872.1_g000011 Rmu_sc0006872.1_g000015 Rmu_sc0006872.1_g000016 Rmu_sc0006952.1_g000013 Rmu_sc0007342.1_g000005 Rmu_sc0007342.1_g000006 Rmu_sc0008418.1_g000003 Rmu_sc0008418.1_g000006 Rmu_sc0008636.1_g000007 Rmu_sc0008636.1_g000008 Rmu_sc0009205.1_g000014 Rmu_sc0009365.1_g000014 Rmu_sc0009917.1_g000002 Rmu_sc0019289.1_g000003 Rmu_ssc0000098.1_g000011 Rmu_ssc0000098.1_g000012 Rmu_ssc0000167.1_g000018 Rmu_ssc0000167.1_g000024 Rmu_ssc0000326.1_g000015
rosa_roxburghii Rroxscaffold_166G00440780 Rroxscaffold_176G00431500 Rroxscaffold_1G00015080 Rroxscaffold_1G00027880 Rroxscaffold_1G00027890 Rroxscaffold_1G00027920 Rroxscaffold_2G00127250 Rroxscaffold_2G00148380 Rroxscaffold_3G00219450 Rroxscaffold_3G00232170 Rroxscaffold_3G00232210 Rroxscaffold_3G00242230 Rroxscaffold_3G00242240 Rroxscaffold_3G00244790 Rroxscaffold_3G00245790 Rroxscaffold_4G00278400 Rroxscaffold_4G00278430 Rroxscaffold_4G00278670 Rroxscaffold_4G00278680 Rroxscaffold_4G00278690 Rroxscaffold_4G00278700 Rroxscaffold_4G00278720 Rroxscaffold_4G00291690 Rroxscaffold_4G00292070 Rroxscaffold_4G00292090 Rroxscaffold_4G00292770 Rroxscaffold_4G00302240 Rroxscaffold_4G00302860 Rroxscaffold_4G00311320 Rroxscaffold_4G00311330 Rroxscaffold_4G00320570 Rroxscaffold_4G00322050 Rroxscaffold_4G00329480 Rroxscaffold_4G00329730 Rroxscaffold_5G00345500 Rroxscaffold_5G00345510 Rroxscaffold_5G00360830 Rroxscaffold_5G00360840 Rroxscaffold_6G00393450 Rroxscaffold_6G00404030 Rroxscaffold_6G00414220 Rroxscaffold_6G00414230 Rroxscaffold_6G00414280 Rroxscaffold_6G00414290 Rroxscaffold_6G00414350 Rroxscaffold_6G00414470 Rroxscaffold_7G00202570 Rroxscaffold_7G00203460 Rroxscaffold_7G00203470
rosa_rugosa Rorug01G0020500 Rorug01G0020600 Rorug01G0020700 Rorug01G0143700.1 Rorug01G0225700 Rorug01G0228500 Rorug01G0228600 Rorug01G0228600 Rorug01G0228700 Rorug01G0228800 Rorug01G0228800 Rorug01G0229000 Rorug01G0229300 Rorug01G0229400 Rorug01G0229600 Rorug01G0229700 Rorug01G0232200 Rorug01G0232600 Rorug01G0232600 Rorug01G0311900 Rorug01G0311900 Rorug01G0318400 Rorug01G0318500 Rorug01G0318500 Rorug01G0318500 Rorug01G0427900 Rorug01G0427900 Rorug01G0428000 Rorug01G0428200 Rorug01G0428300 Rorug01G0428400 Rorug01G0431500 Rorug01G0431600 Rorug01G0431600 Rorug02G0033800 Rorug02G0206300 Rorug03G0081900 Rorug03G0083200 Rorug03G0083200 Rorug03G0083300 Rorug04G0025100 Rorug04G0025100 Rorug04G0025200 Rorug04G0025300 Rorug04G0058600 Rorug04G0058700 Rorug04G0058800 Rorug04G0098400 Rorug04G0098500 Rorug05G0274500 Rorug05G0274600 Rorug05G0274800 Rorug06G0008500 Rorug06G0009100 Rorug06G0018000
rosa_samantha Rh1AG031700 Rh1AG036100 Rh1AG089800 Rh1AG239800 Rh1AG239900 Rh1AG242000 Rh1AG242300 Rh1AG245600 Rh1AG262600 Rh1AG319700 Rh1AG319800 Rh1AG319900 Rh1AG327200 Rh1AG451100 Rh1AG451200 Rh1AG451300 Rh1AG451600 Rh1AG451700 Rh1BG027200 Rh1BG071600 Rh1BG090700 Rh1BG211000 Rh1BG213000 Rh1BG213500 Rh1BG282800 Rh1BG288400 Rh1BG408100 Rh1BG408200 Rh1BG408400 Rh1BG408700 Rh1CG026300 Rh1CG028300 Rh1CG224100 Rh1CG226000 Rh1CG226100 Rh1CG229300 Rh1CG229400 Rh1CG245900 Rh1CG299200 Rh1CG299400 Rh1CG299500 Rh1CG303300 Rh1CG305100 Rh1CG422500 Rh1CG422600 Rh1CG422700 Rh1CG422800 Rh1CG422900 Rh1CG423100 Rh1CG423300 Rh1CG423400 Rh1CG426300 Rh1CG426600 Rh1DG239300 Rh1DG239600 Rh1DG258300 Rh1DG314200 Rh1DG314300 Rh1DG314400 Rh1DG320000 Rh1DG439200 Rh1DG439400 Rh1DG439500 Rh1DG439700 Rh1DG440000 Rh1DG443800 Rh2AG261800 Rh2BG080900 Rh2CG083300 Rh2DG078900 Rh2DG270000 Rh2DG270100 Rh3AG128400 Rh3AG130100 Rh3AG130500 Rh3AG332500 Rh3AG332600 Rh3AG332800 Rh3BG149700 Rh3BG151500 Rh3CG151400 Rh3CG354500 Rh3CG366800 Rh3DG150500 Rh3DG152200 Rh4AG101400 Rh4AG102900 Rh4AG148300 Rh4AG148600 Rh4BG098000 Rh4CG111100 Rh4CG111300 Rh4CG155100 Rh4DG094800 Rh5AG213600 Rh5AG346900 Rh5AG347000 Rh5BG357500 Rh5BG357700 Rh5BG485400 Rh5CG383100 Rh5CG383200 Rh5CG383300 Rh5CG509900 Rh5DG373000 Rh5DG373200 Rh6BG054300 Rh6BG126300 Rh6CG125100 Rh6CG185300 Rh6DG177000 Rh7AG276100 Rh7AG276200 Rh7BG230500 Rh7BG270500 Rh7BG364000 Rh7CG250100 Rh7CG295200 Rh7CG295300 Rh7DG389700
rosa_wichuraiana Rw0G001190 Rw0G010680 Rw0G013360 Rw0G014310 Rw0G014890 Rw0G020310 Rw0G021350 Rw0G022510 Rw1G003360 Rw1G004330 Rw1G006930 Rw1G008310 Rw1G021090 Rw1G021150 Rw1G021210 Rw1G023200 Rw1G023210 Rw1G028340 Rw1G028350 Rw1G028990 Rw1G032510 Rw1G039370 Rw1G039400 Rw1G039410 Rw1G039420 Rw1G039430 Rw2G006700 Rw2G020550 Rw2G020580 Rw3G012130 Rw3G012300 Rw3G012310 Rw3G028220 Rw3G029230 Rw5G021600 Rw5G032790 Rw6G011240 Rw7G027670 Rw7G032780

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 493
Acc36I ACCTGC 1 cut(s) 493
AccB1I GGYRCC 2 cut(s) 1737, 2305
AccBSI CCGCTC 1 cut(s) 648
AccI GTMKAC 1 cut(s) 1972
AccIII TCCGGA 1 cut(s) 130
AciI CCGC 8 cut(s) 13, 500, 610, 648, 786, 1267, 1920, 2063
AclWI GGATC 5 cut(s) 122, 194, 2054, 2112, 2334
AcoI YGGCCR 2 cut(s) 63, 1786
AcsI RAATTY 3 cut(s) 985, 1646, 2052
AcuI CTGAAG 3 cut(s) 408, 899, 1169
AcyI GRCGYC 1 cut(s) 1738
AfaI GTAC 8 cut(s) 215, 711, 728, 802, 1899, 2120, 2185, 2256
AfiI CCNNNNNNNGG 2 cut(s) 407, 1763
AflII CTTAAG 1 cut(s) 1298
AjnI CCWGG 3 cut(s) 246, 2100, 2151
AluBI AGCT 7 cut(s) 485, 755, 1040, 1371, 1665, 1672, 1872
AluI AGCT 7 cut(s) 485, 755, 1040, 1371, 1665, 1672, 1872
Alw26I GTCTC 6 cut(s) 289, 743, 1645, 1815, 2062, 2217
AlwI GGATC 5 cut(s) 122, 194, 2054, 2112, 2334
AlwNI CAGNNNCTG 1 cut(s) 1951
Ama87I CYCGRG 1 cut(s) 1567
Aor13HI TCCGGA 1 cut(s) 130
AoxI GGCC 5 cut(s) 63, 537, 976, 1754, 1786
ApeKI GCWGC 3 cut(s) 365, 958, 2228
ApoI RAATTY 3 cut(s) 985, 1646, 2052
Asp700I GAANNNNTTC 1 cut(s) 1518
AspA2I CCTAGG 1 cut(s) 1757
AspLEI GCGC 1 cut(s) 1740
AspS9I GGNCC 4 cut(s) 537, 976, 1434, 1754
AsuC2I CCSGG 1 cut(s) 67
AsuHPI GGTGA 4 cut(s) 91, 520, 1511, 1842
AvaI CYCGRG 1 cut(s) 1567
AvaII GGWCC 1 cut(s) 1434
AvrII CCTAGG 1 cut(s) 1757
BanI GGYRCC 2 cut(s) 1737, 2305
BanII GRGCYC 2 cut(s) 798, 1828
BauI CACGAG 2 cut(s) 370, 600
BbsI GAAGAC 2 cut(s) 1127, 2089
BbvI GCAGC 3 cut(s) 377, 945, 2215
BccI CCATC 2 cut(s) 1147, 1898
BcgI CGANNNNNNTGC 2 cut(s) 1876, 1910
BciT130I CCWGG 3 cut(s) 248, 2102, 2153
BcnI CCSGG 1 cut(s) 67
BcoDI GTCTC 6 cut(s) 289, 743, 1645, 1815, 2062, 2217
BfaI CTAG 3 cut(s) 636, 1758, 1796
BfoI RGCGCY 1 cut(s) 1741
BfrI CTTAAG 1 cut(s) 1298
BfuAI ACCTGC 1 cut(s) 493
BglII AGATCT 2 cut(s) 301, 1144
BisI GCNGC 3 cut(s) 366, 959, 2229
BlnI CCTAGG 1 cut(s) 1757
BlpI GCTNAGC 1 cut(s) 1873
BlsI GCNGC 3 cut(s) 367, 960, 2230
BmcAI AGTACT 3 cut(s) 802, 2185, 2256
Bme1390I CCNGG 4 cut(s) 67, 248, 2102, 2153
Bme18I GGWCC 1 cut(s) 1434
BmeT110I CYCGRG 1 cut(s) 1567
BmgT120I GGNCC 4 cut(s) 537, 976, 1434, 1754
BmiI GGNNCC 5 cut(s) 633, 977, 1392, 1739, 2307
BmrFI CCNGG 4 cut(s) 67, 248, 2102, 2153
BmrI ACTGGG 4 cut(s) 61, 792, 1779, 2246
BmsI GCATC 6 cut(s) 247, 418, 621, 898, 1002, 1348
BmuI ACTGGG 4 cut(s) 61, 792, 1779, 2246
BpiI GAAGAC 2 cut(s) 1127, 2089
Bpu10I CCTNAGC 1 cut(s) 1280
Bpu1102I GCTNAGC 1 cut(s) 1873
BpuEI CTTGAG 3 cut(s) 271, 1418, 1511
BpuMI CCSGG 1 cut(s) 67
Bsa29I ATCGAT 1 cut(s) 380
BsaBI GATNNNNATC 2 cut(s) 38, 1412
BsaHI GRCGYC 1 cut(s) 1738
BsaI GGTCTC 1 cut(s) 2062
BsaJI CCNNGG 7 cut(s) 66, 247, 1362, 1691, 1757, 2001, 2152
BsaWI WCCGGW 1 cut(s) 130
BsaXI ACNNNNNCTCC 2 cut(s) 591, 621
Bsc4I CCNNNNNNNGG 2 cut(s) 407, 1763
Bse118I RCCGGY 2 cut(s) 1740, 1784
Bse1I ACTGG 5 cut(s) 56, 798, 1774, 1905, 2252
Bse3DI GCAATG 2 cut(s) 968, 1425
Bse8I GATNNNNATC 2 cut(s) 38, 1412
BseAI TCCGGA 1 cut(s) 130
BseBI CCWGG 3 cut(s) 248, 2102, 2153
BseCI ATCGAT 1 cut(s) 380
BseDI CCNNGG 7 cut(s) 66, 247, 1362, 1691, 1757, 2001, 2152
BseGI GGATG 4 cut(s) 433, 794, 1315, 1909
BseJI GATNNNNATC 2 cut(s) 38, 1412
BseLI CCNNNNNNNGG 2 cut(s) 407, 1763
BseMI GCAATG 2 cut(s) 968, 1425
BseMII CTCAG 3 cut(s) 636, 1834, 2295
BseNI ACTGG 5 cut(s) 56, 798, 1774, 1905, 2252
BseXI GCAGC 3 cut(s) 377, 945, 2215
BseYI CCCAGC 1 cut(s) 759
BsgI GTGCAG 2 cut(s) 864, 1049
BshFI GGCC 5 cut(s) 65, 539, 978, 1756, 1788
BshNI GGYRCC 2 cut(s) 1737, 2305
BshVI ATCGAT 1 cut(s) 380
BsiHKCI CYCGRG 1 cut(s) 1567
BsiSI CCGG 4 cut(s) 66, 131, 1741, 1785
BslFI GGGAC 2 cut(s) 151, 1570
BslI CCNNNNNNNGG 2 cut(s) 407, 1763
BsmAI GTCTC 6 cut(s) 289, 743, 1645, 1815, 2062, 2217
BsmBI CGTCTC 1 cut(s) 2217
BsmFI GGGAC 2 cut(s) 151, 1570
BsmI GAATGC 1 cut(s) 1330
BsnI GGCC 5 cut(s) 65, 539, 978, 1756, 1788
Bso31I GGTCTC 1 cut(s) 2062
BsoBI CYCGRG 1 cut(s) 1567
Bsp1286I GDGCHC 2 cut(s) 798, 1828
Bsp13I TCCGGA 1 cut(s) 130
Bsp1407I TGTACA 2 cut(s) 213, 2118
Bsp1720I GCTNAGC 1 cut(s) 1873
Bsp19I CCATGG 1 cut(s) 2001
BspACI CCGC 8 cut(s) 13, 500, 610, 648, 786, 1267, 1920, 2063
BspANI GGCC 5 cut(s) 65, 539, 978, 1756, 1788
BspCNI CTCAG 3 cut(s) 635, 1833, 2294
BspDI ATCGAT 1 cut(s) 380
BspEI TCCGGA 1 cut(s) 130
BspLI GGNNCC 5 cut(s) 633, 977, 1392, 1739, 2307
BspMI ACCTGC 1 cut(s) 493
BspPI GGATC 5 cut(s) 122, 194, 2054, 2112, 2334
BspQI GCTCTTC 1 cut(s) 918
BspT107I GGYRCC 2 cut(s) 1737, 2305
BspTI CTTAAG 1 cut(s) 1298
BspTNI GGTCTC 1 cut(s) 2062
BsrBI CCGCTC 1 cut(s) 648
BsrDI GCAATG 2 cut(s) 968, 1425
BsrFI RCCGGY 2 cut(s) 1740, 1784
BsrGI TGTACA 2 cut(s) 213, 2118
BsrI ACTGG 5 cut(s) 56, 798, 1774, 1905, 2252
BssAI RCCGGY 2 cut(s) 1740, 1784
BssECI CCNNGG 7 cut(s) 66, 247, 1362, 1691, 1757, 2001, 2152
BssNAI GTATAC 1 cut(s) 1973
BssNI GRCGYC 1 cut(s) 1738
BssSI CACGAG 2 cut(s) 370, 600
BssT1I CCWWGG 3 cut(s) 1691, 1757, 2001
Bst1107I GTATAC 1 cut(s) 1973
Bst2BI CACGAG 2 cut(s) 370, 600
Bst2UI CCWGG 3 cut(s) 248, 2102, 2153
Bst4CI ACNGT 4 cut(s) 79, 885, 1579, 2266
Bst6I CTCTTC 3 cut(s) 384, 918, 1932
BstACI GRCGYC 1 cut(s) 1738
BstAFI CTTAAG 1 cut(s) 1298
BstAUI TGTACA 2 cut(s) 213, 2118
BstC8I GCNNGC 3 cut(s) 757, 980, 2233
BstDEI CTNAG 5 cut(s) 622, 1280, 1820, 1873, 2281
BstDSI CCRYGG 1 cut(s) 2001
BstENI CCTNNNNNAGG 1 cut(s) 405
BstF5I GGATG 4 cut(s) 433, 794, 1315, 1909
BstH2I RGCGCY 1 cut(s) 1741
BstHHI GCGC 1 cut(s) 1740
BstMAI GTCTC 6 cut(s) 289, 743, 1645, 1815, 2062, 2217
BstMWI GCNNNNNNNGC 3 cut(s) 12, 645, 1616
BstNI CCWGG 3 cut(s) 248, 2102, 2153
BstSCI CCNGG 4 cut(s) 65, 246, 2100, 2151
BstV1I GCAGC 3 cut(s) 377, 945, 2215
BstV2I GAAGAC 2 cut(s) 1127, 2089
BstX2I RGATCY 4 cut(s) 199, 301, 1144, 2104
BstXI CCANNNNNNTGG 1 cut(s) 51
BstYI RGATCY 4 cut(s) 199, 301, 1144, 2104
BstZ17I GTATAC 1 cut(s) 1973
Bsu15I ATCGAT 1 cut(s) 380
BsuRI GGCC 5 cut(s) 65, 539, 978, 1756, 1788
BsuTUI ATCGAT 1 cut(s) 380
BtgI CCRYGG 1 cut(s) 2001
BtsCI GGATG 4 cut(s) 433, 794, 1315, 1909
BtsI GCAGTG 2 cut(s) 876, 1037
BtsIMutI CAGTG 3 cut(s) 876, 881, 1037
BveI ACCTGC 1 cut(s) 493
Cac8I GCNNGC 3 cut(s) 757, 980, 2233
CaiI CAGNNNCTG 1 cut(s) 1951
CfoI GCGC 1 cut(s) 1740
Cfr10I RCCGGY 2 cut(s) 1740, 1784
Cfr13I GGNCC 4 cut(s) 537, 976, 1434, 1754
ClaI ATCGAT 1 cut(s) 380
CseI GACGC 1 cut(s) 2234
Csp6I GTAC 8 cut(s) 214, 710, 727, 801, 1898, 2119, 2184, 2255
CspCI CAANNNNNGTGG 2 cut(s) 936, 971
CviAII CATG 7 cut(s) 517, 707, 1205, 1431, 1748, 1790, 2002
CviQI GTAC 8 cut(s) 214, 710, 727, 801, 1898, 2119, 2184, 2255
DdeI CTNAG 5 cut(s) 622, 1280, 1820, 1873, 2281
DinI GGCGCC 1 cut(s) 1739
EaeI YGGCCR 2 cut(s) 63, 1786
Eam1104I CTCTTC 3 cut(s) 384, 918, 1932
EarI CTCTTC 3 cut(s) 384, 918, 1932
Eco130I CCWWGG 3 cut(s) 1691, 1757, 2001
Eco24I GRGCYC 2 cut(s) 798, 1828
Eco31I GGTCTC 1 cut(s) 2062
Eco32I GATATC 2 cut(s) 40, 378
Eco47I GGWCC 1 cut(s) 1434
Eco57I CTGAAG 3 cut(s) 408, 899, 1169
Eco88I CYCGRG 1 cut(s) 1567
EcoNI CCTNNNNNAGG 1 cut(s) 405
EcoO109I RGGNCCY 3 cut(s) 537, 976, 1754
EcoRII CCWGG 3 cut(s) 246, 2100, 2151
EcoRV GATATC 2 cut(s) 40, 378
EcoT14I CCWWGG 3 cut(s) 1691, 1757, 2001
EcoT38I GRGCYC 2 cut(s) 798, 1828
EgeI GGCGCC 1 cut(s) 1739
EheI GGCGCC 1 cut(s) 1739
ErhI CCWWGG 3 cut(s) 1691, 1757, 2001
Esp3I CGTCTC 1 cut(s) 2217
FaeI CATG 7 cut(s) 520, 710, 1208, 1434, 1751, 1793, 2005
FalI AAGNNNNNCTT 4 cut(s) 264, 296, 1506, 1538
FaqI GGGAC 2 cut(s) 151, 1570
FatI CATG 7 cut(s) 516, 706, 1204, 1430, 1747, 1789, 2001
FauNDI CATATG 1 cut(s) 1305
FblI GTMKAC 1 cut(s) 1972
Fnu4HI GCNGC 3 cut(s) 366, 959, 2229
FokI GGATG 4 cut(s) 440, 801, 1322, 1916
FriOI GRGCYC 2 cut(s) 798, 1828
Fsp4HI GCNGC 3 cut(s) 366, 959, 2229
FspBI CTAG 3 cut(s) 636, 1758, 1796
GlaI GCGC 1 cut(s) 1739
GluI GCNGC 3 cut(s) 366, 959, 2229
GsaI CCCAGC 1 cut(s) 763
HaeII RGCGCY 1 cut(s) 1741
HaeIII GGCC 5 cut(s) 65, 539, 978, 1756, 1788
HapII CCGG 4 cut(s) 66, 131, 1741, 1785
HgaI GACGC 1 cut(s) 2234
HhaI GCGC 1 cut(s) 1740
Hin1I GRCGYC 1 cut(s) 1738
Hin1II CATG 7 cut(s) 520, 710, 1208, 1434, 1751, 1793, 2005
Hin6I GCGC 1 cut(s) 1738
HinP1I GCGC 1 cut(s) 1738
HincII GTYRAC 1 cut(s) 936
HindII GTYRAC 1 cut(s) 936
HinfI GANTC 5 cut(s) 23, 71, 511, 932, 1074
HpaII CCGG 4 cut(s) 66, 131, 1741, 1785
HphI GGTGA 4 cut(s) 91, 520, 1511, 1842
Hpy166II GTNNAC 4 cut(s) 319, 936, 1724, 1973
Hpy188III TCNNGA 9 cut(s) 125, 131, 288, 905, 1103, 1382, 1567, 1796, 2057
Hpy8I GTNNAC 4 cut(s) 319, 936, 1724, 1973
HpyAV CCTTC 2 cut(s) 558, 700
HpyCH4III ACNGT 4 cut(s) 79, 885, 1579, 2266
HpyCH4IV ACGT 1 cut(s) 1733
HpyF10VI GCNNNNNNNGC 3 cut(s) 12, 645, 1616
HpyF3I CTNAG 5 cut(s) 622, 1280, 1820, 1873, 2281
HpySE526I ACGT 1 cut(s) 1733
Hsp92I GRCGYC 1 cut(s) 1738
Hsp92II CATG 7 cut(s) 520, 710, 1208, 1434, 1751, 1793, 2005
HspAI GCGC 1 cut(s) 1738
KasI GGCGCC 1 cut(s) 1737
Kpn2I TCCGGA 1 cut(s) 130
LguI GCTCTTC 1 cut(s) 918
LmnI GCTCC 4 cut(s) 637, 716, 1669, 2190
Lsp1109I GCAGC 3 cut(s) 377, 945, 2215
LweI GCATC 6 cut(s) 247, 418, 621, 898, 1002, 1348
MaeI CTAG 3 cut(s) 636, 1758, 1796
MaeII ACGT 1 cut(s) 1733
MaeIII GTNAC 8 cut(s) 274, 295, 553, 812, 1119, 1557, 1915, 2266
MbiI CCGCTC 1 cut(s) 648
MflI RGATCY 4 cut(s) 199, 301, 1144, 2104
MhlI GDGCHC 2 cut(s) 798, 1828
Mly113I GGCGCC 1 cut(s) 1738
MlyI GAGTC 2 cut(s) 17, 941
MmeI TCCRAC 3 cut(s) 909, 1990, 2323
MroI TCCGGA 1 cut(s) 130
MroXI GAANNNNTTC 1 cut(s) 1518
MslI CAYNNNNRTG 2 cut(s) 1128, 1308
MspCI CTTAAG 1 cut(s) 1298
MspI CCGG 4 cut(s) 66, 131, 1741, 1785
MspR9I CCNGG 4 cut(s) 67, 248, 2102, 2153
Mva1269I GAATGC 1 cut(s) 1330
MvaI CCWGG 3 cut(s) 248, 2102, 2153
MwoI GCNNNNNNNGC 3 cut(s) 12, 645, 1616
NarI GGCGCC 1 cut(s) 1738
NciI CCSGG 1 cut(s) 67
NcoI CCATGG 1 cut(s) 2001
NdeI CATATG 1 cut(s) 1305
NlaIII CATG 7 cut(s) 520, 710, 1208, 1434, 1751, 1793, 2005
NlaIV GGNNCC 5 cut(s) 633, 977, 1392, 1739, 2307
NmeAIII GCCGAG 1 cut(s) 1387
NmuCI GTSAC 2 cut(s) 812, 2266
PaeR7I CTCGAG 1 cut(s) 1567
PaqCI CACCTGC 1 cut(s) 493
PciSI GCTCTTC 1 cut(s) 918
PcsI WCGNNNNNNNCGW 1 cut(s) 377
PctI GAATGC 1 cut(s) 1330
PdmI GAANNNNTTC 1 cut(s) 1518
PfeI GAWTC 3 cut(s) 71, 511, 1074
PfoI TCCNGGA 1 cut(s) 2100
PkrI GCNGC 3 cut(s) 367, 960, 2230
PleI GAGTC 2 cut(s) 17, 940
PluTI GGCGCC 1 cut(s) 1741
PpsI GAGTC 2 cut(s) 17, 940
Psp6I CCWGG 3 cut(s) 246, 2100, 2151
PspFI CCCAGC 1 cut(s) 759
PspGI CCWGG 3 cut(s) 246, 2100, 2151
PspN4I GGNNCC 5 cut(s) 633, 977, 1392, 1739, 2307
PspPI GGNCC 4 cut(s) 537, 976, 1434, 1754
PstNI CAGNNNCTG 1 cut(s) 1951
PsuI RGATCY 4 cut(s) 199, 301, 1144, 2104
RsaI GTAC 8 cut(s) 215, 711, 728, 802, 1899, 2120, 2185, 2256
RsaNI GTAC 8 cut(s) 214, 710, 727, 801, 1898, 2119, 2184, 2255
RseI CAYNNNNRTG 2 cut(s) 1128, 1308
SapI GCTCTTC 1 cut(s) 918
SatI GCNGC 3 cut(s) 366, 959, 2229
Sau96I GGNCC 4 cut(s) 537, 976, 1434, 1754
ScaI AGTACT 3 cut(s) 802, 2185, 2256
SchI GAGTC 2 cut(s) 17, 941
ScrFI CCNGG 4 cut(s) 67, 248, 2102, 2153
SduI GDGCHC 2 cut(s) 798, 1828
SfaNI GCATC 6 cut(s) 247, 418, 621, 898, 1002, 1348
SfoI GGCGCC 1 cut(s) 1739
Sfr274I CTCGAG 1 cut(s) 1567
SinI GGWCC 1 cut(s) 1434
SlaI CTCGAG 1 cut(s) 1567
SmiMI CAYNNNNRTG 2 cut(s) 1128, 1308
SmlI CTYRAG 5 cut(s) 286, 1298, 1397, 1490, 1567
SmoI CTYRAG 5 cut(s) 286, 1298, 1397, 1490, 1567
SsiI CCGC 8 cut(s) 13, 500, 610, 648, 786, 1267, 1920, 2063
SspDI GGCGCC 1 cut(s) 1737
SspI AATATT 2 cut(s) 165, 1450
SspMI CTAG 3 cut(s) 636, 1758, 1796
StyD4I CCNGG 4 cut(s) 65, 246, 2100, 2151
StyI CCWWGG 3 cut(s) 1691, 1757, 2001
TaaI ACNGT 4 cut(s) 79, 885, 1579, 2266
TaiI ACGT 1 cut(s) 1736
TaqI TCGA 6 cut(s) 380, 888, 1072, 1209, 1568, 2058
TatI WGTACW 6 cut(s) 213, 709, 800, 2118, 2183, 2254
TfiI GAWTC 3 cut(s) 71, 511, 1074
TscAI CASTG 3 cut(s) 883, 888, 1037
TseFI GTSAC 2 cut(s) 812, 2266
TseI GCWGC 3 cut(s) 365, 958, 2228
Tsp45I GTSAC 2 cut(s) 812, 2266
TspDTI ATGAA 6 cut(s) 110, 254, 1193, 1326, 1402, 2159
TspGWI ACGGA 1 cut(s) 1096
TspRI CASTG 3 cut(s) 883, 888, 1037
Vha464I CTTAAG 1 cut(s) 1298
VpaK11BI GGWCC 1 cut(s) 1434
XagI CCTNNNNNAGG 1 cut(s) 405
XapI RAATTY 3 cut(s) 985, 1646, 2052
XbaI TCTAGA 1 cut(s) 1795
XhoI CTCGAG 1 cut(s) 1567
XmaJI CCTAGG 1 cut(s) 1757
XmiI GTMKAC 1 cut(s) 1972
XmnI GAANNNNTTC 1 cut(s) 1518
XspI CTAG 3 cut(s) 636, 1758, 1796
ZrmI AGTACT 3 cut(s) 802, 2185, 2256
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.