Cyclic nucleotide-gated ion channel 1-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 533 |
| AarI | CACCTGC | 1 cut(s) | 499 |
| Acc36I | ACCTGC | 1 cut(s) | 499 |
| AciI | CCGC | 3 cut(s) | 506, 1121, 1377 |
| AclWI | GGATC | 1 cut(s) | 197 |
| AcsI | RAATTY | 4 cut(s) | 27, 362, 871, 991 |
| AcvI | CACGTG | 1 cut(s) | 608 |
| AfaI | GTAC | 2 cut(s) | 734, 1278 |
| AfeI | AGCGCT | 1 cut(s) | 888 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 508 |
| AflIII | ACRYGT | 2 cut(s) | 607, 1303 |
| AgsI | TTSAA | 5 cut(s) | 291, 335, 749, 1011, 1154 |
| AjnI | CCWGG | 1 cut(s) | 1337 |
| Alw21I | GWGCWC | 1 cut(s) | 548 |
| Alw26I | GTCTC | 1 cut(s) | 45 |
| AlwI | GGATC | 1 cut(s) | 197 |
| Ama87I | CYCGRG | 1 cut(s) | 356 |
| Aor51HI | AGCGCT | 1 cut(s) | 888 |
| AoxI | GGCC | 3 cut(s) | 369, 1213, 1340 |
| ApeKI | GCWGC | 1 cut(s) | 1147 |
| ApoI | RAATTY | 4 cut(s) | 27, 362, 871, 991 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 19, 51 |
| AspLEI | GCGC | 1 cut(s) | 889 |
| AsuC2I | CCSGG | 3 cut(s) | 357, 358, 630 |
| AvaI | CYCGRG | 1 cut(s) | 356 |
| BanII | GRGCYC | 1 cut(s) | 548 |
| BbrPI | CACGTG | 1 cut(s) | 608 |
| BbsI | GAAGAC | 1 cut(s) | 1048 |
| Bbv12I | GWGCWC | 1 cut(s) | 548 |
| BbvCI | CCTCAGC | 1 cut(s) | 539 |
| BbvI | GCAGC | 1 cut(s) | 1159 |
| BccI | CCATC | 1 cut(s) | 1351 |
| BceAI | ACGGC | 1 cut(s) | 1228 |
| BciT130I | CCWGG | 1 cut(s) | 1339 |
| BclI | TGATCA | 1 cut(s) | 1263 |
| BcnI | CCSGG | 3 cut(s) | 357, 358, 630 |
| BcoDI | GTCTC | 1 cut(s) | 45 |
| BfaI | CTAG | 3 cut(s) | 200, 755, 804 |
| BfoI | RGCGCY | 1 cut(s) | 890 |
| BfuAI | ACCTGC | 1 cut(s) | 499 |
| BglII | AGATCT | 1 cut(s) | 293 |
| BisI | GCNGC | 1 cut(s) | 1148 |
| BlsI | GCNGC | 1 cut(s) | 1149 |
| Bme1390I | CCNGG | 4 cut(s) | 357, 358, 630, 1339 |
| BmeT110I | CYCGRG | 1 cut(s) | 356 |
| BmrFI | CCNGG | 4 cut(s) | 357, 358, 630, 1339 |
| BmrI | ACTGGG | 1 cut(s) | 1017 |
| BmsI | GCATC | 5 cut(s) | 627, 640, 904, 1158, 1346 |
| BmuI | ACTGGG | 1 cut(s) | 1017 |
| BpiI | GAAGAC | 1 cut(s) | 1048 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 25, 57 |
| BpmI | CTGGAG | 1 cut(s) | 1001 |
| Bpu10I | CCTNAGC | 1 cut(s) | 539 |
| BpuMI | CCSGG | 3 cut(s) | 357, 358, 630 |
| BsaAI | YACGTR | 1 cut(s) | 608 |
| BsaBI | GATNNNNATC | 2 cut(s) | 1262, 1360 |
| BsaJI | CCNNGG | 2 cut(s) | 356, 1337 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 508 |
| Bse1I | ACTGG | 1 cut(s) | 1023 |
| Bse3DI | GCAATG | 1 cut(s) | 832 |
| Bse8I | GATNNNNATC | 2 cut(s) | 1262, 1360 |
| BseBI | CCWGG | 1 cut(s) | 1339 |
| BseDI | CCNNGG | 2 cut(s) | 356, 1337 |
| BseGI | GGATG | 5 cut(s) | 655, 699, 800, 1320, 1361 |
| BseJI | GATNNNNATC | 2 cut(s) | 1262, 1360 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 508 |
| BseMI | GCAATG | 1 cut(s) | 832 |
| BseMII | CTCAG | 3 cut(s) | 265, 530, 1176 |
| BseNI | ACTGG | 1 cut(s) | 1023 |
| BseRI | GAGGAG | 1 cut(s) | 556 |
| BseXI | GCAGC | 1 cut(s) | 1159 |
| BshFI | GGCC | 3 cut(s) | 371, 1215, 1342 |
| BsiHKAI | GWGCWC | 1 cut(s) | 548 |
| BsiHKCI | CYCGRG | 1 cut(s) | 356 |
| BsiSI | CCGG | 2 cut(s) | 357, 629 |
| BslFI | GGGAC | 2 cut(s) | 101, 1011 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 508 |
| BsmAI | GTCTC | 1 cut(s) | 45 |
| BsmFI | GGGAC | 2 cut(s) | 101, 1011 |
| BsnI | GGCC | 3 cut(s) | 371, 1215, 1342 |
| BsoBI | CYCGRG | 1 cut(s) | 356 |
| Bsp1286I | GDGCHC | 1 cut(s) | 548 |
| Bsp143I | GATC | 5 cut(s) | 202, 293, 422, 1139, 1263 |
| BspACI | CCGC | 3 cut(s) | 506, 1121, 1377 |
| BspANI | GGCC | 3 cut(s) | 371, 1215, 1342 |
| BspCNI | CTCAG | 3 cut(s) | 264, 531, 1177 |
| BspHI | TCATGA | 1 cut(s) | 1266 |
| BspMI | ACCTGC | 1 cut(s) | 499 |
| BspPI | GGATC | 1 cut(s) | 197 |
| BspQI | GCTCTTC | 2 cut(s) | 387, 924 |
| BsrDI | GCAATG | 1 cut(s) | 832 |
| BsrI | ACTGG | 1 cut(s) | 1023 |
| BssECI | CCNNGG | 2 cut(s) | 356, 1337 |
| BssMI | GATC | 5 cut(s) | 202, 293, 422, 1139, 1263 |
| Bst2UI | CCWGG | 1 cut(s) | 1339 |
| Bst4CI | ACNGT | 2 cut(s) | 73, 581 |
| Bst6I | CTCTTC | 2 cut(s) | 387, 924 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1365 |
| BstBAI | YACGTR | 1 cut(s) | 608 |
| BstC8I | GCNNGC | 2 cut(s) | 13, 1076 |
| BstDEI | CTNAG | 5 cut(s) | 251, 450, 539, 851, 1185 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 506 |
| BstF5I | GGATG | 5 cut(s) | 655, 699, 800, 1320, 1361 |
| BstH2I | RGCGCY | 1 cut(s) | 890 |
| BstHHI | GCGC | 1 cut(s) | 889 |
| BstKTI | GATC | 5 cut(s) | 205, 296, 425, 1142, 1266 |
| BstMAI | GTCTC | 1 cut(s) | 45 |
| BstMBI | GATC | 5 cut(s) | 202, 293, 422, 1139, 1263 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 17, 1365 |
| BstNI | CCWGG | 1 cut(s) | 1339 |
| BstNSI | RCATGY | 2 cut(s) | 1078, 1307 |
| BstSCI | CCNGG | 4 cut(s) | 355, 356, 628, 1337 |
| BstV1I | GCAGC | 1 cut(s) | 1159 |
| BstV2I | GAAGAC | 1 cut(s) | 1048 |
| BstX2I | RGATCY | 2 cut(s) | 202, 293 |
| BstYI | RGATCY | 2 cut(s) | 202, 293 |
| BsuRI | GGCC | 3 cut(s) | 371, 1215, 1342 |
| BtsCI | GGATG | 5 cut(s) | 655, 699, 800, 1320, 1361 |
| BtsIMutI | CAGTG | 1 cut(s) | 974 |
| BveI | ACCTGC | 1 cut(s) | 499 |
| Cac8I | GCNNGC | 2 cut(s) | 13, 1076 |
| CciI | TCATGA | 1 cut(s) | 1266 |
| CfoI | GCGC | 1 cut(s) | 889 |
| Cfr9I | CCCGGG | 1 cut(s) | 356 |
| Csp6I | GTAC | 2 cut(s) | 733, 1277 |
| CviAII | CATG | 7 cut(s) | 17, 713, 1075, 1226, 1267, 1304, 1365 |
| CviQI | GTAC | 2 cut(s) | 733, 1277 |
| DdeI | CTNAG | 5 cut(s) | 251, 450, 539, 851, 1185 |
| DpnI | GATC | 5 cut(s) | 204, 295, 424, 1141, 1265 |
| DpnII | GATC | 5 cut(s) | 202, 293, 422, 1139, 1263 |
| Eam1104I | CTCTTC | 2 cut(s) | 387, 924 |
| EarI | CTCTTC | 2 cut(s) | 387, 924 |
| EciI | GGCGGA | 1 cut(s) | 1366 |
| Ecl136II | GAGCTC | 1 cut(s) | 546 |
| Eco147I | AGGCCT | 1 cut(s) | 371 |
| Eco24I | GRGCYC | 1 cut(s) | 548 |
| Eco47III | AGCGCT | 1 cut(s) | 888 |
| Eco53kI | GAGCTC | 1 cut(s) | 546 |
| Eco72I | CACGTG | 1 cut(s) | 608 |
| Eco88I | CYCGRG | 1 cut(s) | 356 |
| EcoICRI | GAGCTC | 1 cut(s) | 546 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 506 |
| EcoRII | CCWGG | 1 cut(s) | 1337 |
| EcoT22I | ATGCAT | 2 cut(s) | 1036, 1361 |
| EcoT38I | GRGCYC | 1 cut(s) | 548 |
| FaeI | CATG | 7 cut(s) | 20, 716, 1078, 1229, 1270, 1307, 1368 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 267, 299, 359, 391 |
| FaqI | GGGAC | 2 cut(s) | 101, 1011 |
| FatI | CATG | 7 cut(s) | 16, 712, 1074, 1225, 1266, 1303, 1364 |
| FauNDI | CATATG | 1 cut(s) | 1117 |
| FbaI | TGATCA | 1 cut(s) | 1263 |
| Fnu4HI | GCNGC | 1 cut(s) | 1148 |
| FokI | GGATG | 5 cut(s) | 662, 686, 807, 1307, 1368 |
| FriOI | GRGCYC | 1 cut(s) | 548 |
| Fsp4HI | GCNGC | 1 cut(s) | 1148 |
| FspBI | CTAG | 3 cut(s) | 200, 755, 804 |
| GlaI | GCGC | 1 cut(s) | 888 |
| GluI | GCNGC | 1 cut(s) | 1148 |
| GsuI | CTGGAG | 1 cut(s) | 1001 |
| HaeII | RGCGCY | 1 cut(s) | 890 |
| HaeIII | GGCC | 3 cut(s) | 371, 1215, 1342 |
| HapII | CCGG | 2 cut(s) | 357, 629 |
| HhaI | GCGC | 1 cut(s) | 889 |
| Hin1II | CATG | 7 cut(s) | 20, 716, 1078, 1229, 1270, 1307, 1368 |
| Hin6I | GCGC | 1 cut(s) | 887 |
| HinP1I | GCGC | 1 cut(s) | 887 |
| HincII | GTYRAC | 2 cut(s) | 800, 942 |
| HindII | GTYRAC | 2 cut(s) | 800, 942 |
| HindIII | AAGCTT | 2 cut(s) | 9, 435 |
| HinfI | GANTC | 4 cut(s) | 34, 104, 551, 938 |
| HpaII | CCGG | 2 cut(s) | 357, 629 |
| Hpy166II | GTNNAC | 3 cut(s) | 55, 800, 942 |
| Hpy188I | TCNGA | 3 cut(s) | 254, 550, 576 |
| Hpy188III | TCNNGA | 5 cut(s) | 233, 291, 911, 1184, 1267 |
| Hpy8I | GTNNAC | 3 cut(s) | 55, 800, 942 |
| HpyAV | CCTTC | 3 cut(s) | 382, 512, 1226 |
| HpyCH4III | ACNGT | 2 cut(s) | 73, 581 |
| HpyCH4IV | ACGT | 2 cut(s) | 607, 1275 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 17, 1365 |
| HpyF3I | CTNAG | 5 cut(s) | 251, 450, 539, 851, 1185 |
| HpySE526I | ACGT | 2 cut(s) | 607, 1275 |
| Hsp92II | CATG | 7 cut(s) | 20, 716, 1078, 1229, 1270, 1307, 1368 |
| HspAI | GCGC | 1 cut(s) | 887 |
| Ksp22I | TGATCA | 1 cut(s) | 1263 |
| Kzo9I | GATC | 5 cut(s) | 202, 293, 422, 1139, 1263 |
| LguI | GCTCTTC | 2 cut(s) | 387, 924 |
| LmnI | GCTCC | 3 cut(s) | 543, 722, 1123 |
| Lsp1109I | GCAGC | 1 cut(s) | 1159 |
| LweI | GCATC | 5 cut(s) | 627, 640, 904, 1158, 1346 |
| MaeI | CTAG | 3 cut(s) | 200, 755, 804 |
| MaeII | ACGT | 2 cut(s) | 607, 1275 |
| MaeIII | GTNAC | 4 cut(s) | 559, 591, 841, 1200 |
| MalI | GATC | 5 cut(s) | 204, 295, 424, 1141, 1265 |
| MboI | GATC | 5 cut(s) | 202, 293, 422, 1139, 1263 |
| MflI | RGATCY | 2 cut(s) | 202, 293 |
| MhlI | GDGCHC | 1 cut(s) | 548 |
| MluCI | AATT | 9 cut(s) | 27, 120, 362, 477, 516, 808, 871, 991, 1105 |
| MlyI | GAGTC | 2 cut(s) | 43, 947 |
| MnlI | CCTC | 6 cut(s) | 260, 447, 534, 713, 1025, 1382 |
| Mph1103I | ATGCAT | 2 cut(s) | 1036, 1361 |
| MseI | TTAA | 5 cut(s) | 243, 351, 366, 672, 995 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1230, 1308 |
| MspI | CCGG | 2 cut(s) | 357, 629 |
| MspR9I | CCNGG | 4 cut(s) | 357, 358, 630, 1339 |
| MvaI | CCWGG | 1 cut(s) | 1339 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 17, 1365 |
| NciI | CCSGG | 3 cut(s) | 357, 358, 630 |
| NdeI | CATATG | 1 cut(s) | 1117 |
| NdeII | GATC | 5 cut(s) | 202, 293, 422, 1139, 1263 |
| NlaIII | CATG | 7 cut(s) | 20, 716, 1078, 1229, 1270, 1307, 1368 |
| NmuCI | GTSAC | 1 cut(s) | 841 |
| NsiI | ATGCAT | 2 cut(s) | 1036, 1361 |
| NspI | RCATGY | 2 cut(s) | 1078, 1307 |
| PaeI | GCATGC | 1 cut(s) | 1078 |
| PagI | TCATGA | 1 cut(s) | 1266 |
| PaqCI | CACCTGC | 1 cut(s) | 499 |
| PceI | AGGCCT | 1 cut(s) | 371 |
| PciI | ACATGT | 1 cut(s) | 1303 |
| PciSI | GCTCTTC | 2 cut(s) | 387, 924 |
| PfeI | GAWTC | 2 cut(s) | 104, 551 |
| PkrI | GCNGC | 1 cut(s) | 1149 |
| PleI | GAGTC | 2 cut(s) | 42, 946 |
| PmaCI | CACGTG | 1 cut(s) | 608 |
| PmlI | CACGTG | 1 cut(s) | 608 |
| PpsI | GAGTC | 2 cut(s) | 42, 946 |
| Ppu21I | YACGTR | 1 cut(s) | 608 |
| PscI | ACATGT | 1 cut(s) | 1303 |
| PsiI | TTATAA | 1 cut(s) | 533 |
| Psp124BI | GAGCTC | 1 cut(s) | 548 |
| Psp6I | CCWGG | 1 cut(s) | 1337 |
| PspCI | CACGTG | 1 cut(s) | 608 |
| PspGI | CCWGG | 1 cut(s) | 1337 |
| PsuI | RGATCY | 2 cut(s) | 202, 293 |
| RsaI | GTAC | 2 cut(s) | 734, 1278 |
| RsaNI | GTAC | 2 cut(s) | 733, 1277 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1230, 1308 |
| SacI | GAGCTC | 1 cut(s) | 548 |
| SapI | GCTCTTC | 2 cut(s) | 387, 924 |
| SaqAI | TTAA | 5 cut(s) | 243, 351, 366, 672, 995 |
| SatI | GCNGC | 1 cut(s) | 1148 |
| Sau3AI | GATC | 5 cut(s) | 202, 293, 422, 1139, 1263 |
| SchI | GAGTC | 2 cut(s) | 43, 947 |
| ScrFI | CCNGG | 4 cut(s) | 357, 358, 630, 1339 |
| SduI | GDGCHC | 1 cut(s) | 548 |
| SfaNI | GCATC | 5 cut(s) | 627, 640, 904, 1158, 1346 |
| SmaI | CCCGGG | 1 cut(s) | 358 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1230, 1308 |
| SphI | GCATGC | 1 cut(s) | 1078 |
| Sse9I | AATT | 9 cut(s) | 27, 120, 362, 477, 516, 808, 871, 991, 1105 |
| SseBI | AGGCCT | 1 cut(s) | 371 |
| SsiI | CCGC | 3 cut(s) | 506, 1121, 1377 |
| SspI | AATATT | 1 cut(s) | 83 |
| SspMI | CTAG | 3 cut(s) | 200, 755, 804 |
| SstI | GAGCTC | 1 cut(s) | 548 |
| StuI | AGGCCT | 1 cut(s) | 371 |
| StyD4I | CCNGG | 4 cut(s) | 355, 356, 628, 1337 |
| TaaI | ACNGT | 2 cut(s) | 73, 581 |
| TaiI | ACGT | 2 cut(s) | 610, 1278 |
| TaqII | GACCGA | 2 cut(s) | 912, 1042 |
| TasI | AATT | 9 cut(s) | 27, 120, 362, 477, 516, 808, 871, 991, 1105 |
| TfiI | GAWTC | 2 cut(s) | 104, 551 |
| Tru1I | TTAA | 5 cut(s) | 243, 351, 366, 672, 995 |
| Tru9I | TTAA | 5 cut(s) | 243, 351, 366, 672, 995 |
| TscAI | CASTG | 1 cut(s) | 974 |
| TseFI | GTSAC | 1 cut(s) | 841 |
| TseI | GCWGC | 1 cut(s) | 1147 |
| Tsp45I | GTSAC | 1 cut(s) | 841 |
| TspDTI | ATGAA | 7 cut(s) | 117, 284, 511, 688, 1048, 1248, 1283 |
| TspGWI | ACGGA | 1 cut(s) | 959 |
| TspMI | CCCGGG | 1 cut(s) | 356 |
| TspRI | CASTG | 1 cut(s) | 974 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 506 |
| XapI | RAATTY | 4 cut(s) | 27, 362, 871, 991 |
| XceI | RCATGY | 2 cut(s) | 1078, 1307 |
| XmaI | CCCGGG | 1 cut(s) | 356 |
| XspI | CTAG | 3 cut(s) | 200, 755, 804 |
| Zsp2I | ATGCAT | 2 cut(s) | 1036, 1361 |