Cyclic nucleotide-gated ion channel 1-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 750 |
| AatII | GACGTC | 1 cut(s) | 383 |
| AccB1I | GGYRCC | 2 cut(s) | 548, 1514 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 290 |
| AccBSI | CCGCTC | 1 cut(s) | 1367 |
| AccI | GTMKAC | 1 cut(s) | 1104 |
| AccII | CGCG | 2 cut(s) | 394, 1827 |
| AciI | CCGC | 7 cut(s) | 18, 521, 1083, 1357, 1365, 1518, 1840 |
| AclWI | GGATC | 5 cut(s) | 116, 203, 761, 1554, 1567 |
| AcoI | YGGCCR | 2 cut(s) | 281, 1362 |
| AcsI | RAATTY | 6 cut(s) | 52, 245, 725, 1003, 1419, 1736 |
| AcyI | GRCGYC | 1 cut(s) | 380 |
| AfaI | GTAC | 4 cut(s) | 145, 462, 1263, 1380 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 160, 290 |
| AjiI | CACGTC | 1 cut(s) | 365 |
| AjnI | CCWGG | 1 cut(s) | 1122 |
| AleI | CACNNNNGTG | 1 cut(s) | 1520 |
| AluBI | AGCT | 4 cut(s) | 86, 611, 1438, 1527 |
| AluI | AGCT | 4 cut(s) | 86, 611, 1438, 1527 |
| Alw21I | GWGCWC | 1 cut(s) | 1500 |
| Alw26I | GTCTC | 5 cut(s) | 355, 441, 1660, 1680, 1735 |
| AlwI | GGATC | 5 cut(s) | 116, 203, 761, 1554, 1567 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 197 |
| AoxI | GGCC | 3 cut(s) | 281, 657, 1362 |
| ApeKI | GCWGC | 6 cut(s) | 523, 568, 976, 1799, 1817, 1842 |
| ApoI | RAATTY | 6 cut(s) | 52, 245, 725, 1003, 1419, 1736 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 710, 742 |
| AspLEI | GCGC | 5 cut(s) | 394, 396, 1093, 1827, 1829 |
| AspS9I | GGNCC | 1 cut(s) | 657 |
| AsuHPI | GGTGA | 3 cut(s) | 715, 776, 1189 |
| AsuNHI | GCTAGC | 1 cut(s) | 1438 |
| BalI | TGGCCA | 1 cut(s) | 283 |
| BamHI | GGATCC | 1 cut(s) | 1559 |
| BanI | GGYRCC | 2 cut(s) | 548, 1514 |
| BbsI | GAAGAC | 1 cut(s) | 1343 |
| Bbv12I | GWGCWC | 1 cut(s) | 1500 |
| BbvI | GCAGC | 6 cut(s) | 510, 580, 963, 1811, 1829, 1854 |
| BccI | CCATC | 2 cut(s) | 74, 594 |
| BceAI | ACGGC | 1 cut(s) | 662 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 335, 369 |
| BciT130I | CCWGG | 1 cut(s) | 1124 |
| BclI | TGATCA | 3 cut(s) | 3, 561, 1144 |
| BcoDI | GTCTC | 5 cut(s) | 355, 441, 1660, 1680, 1735 |
| BfaI | CTAG | 4 cut(s) | 1100, 1184, 1439, 1772 |
| BfmI | CTRYAG | 1 cut(s) | 1323 |
| BfoI | RGCGCY | 1 cut(s) | 1094 |
| BglII | AGATCT | 1 cut(s) | 1139 |
| BisI | GCNGC | 7 cut(s) | 524, 569, 977, 1365, 1800, 1818, 1843 |
| BlsI | GCNGC | 7 cut(s) | 525, 570, 978, 1366, 1801, 1819, 1844 |
| Bme1390I | CCNGG | 1 cut(s) | 1124 |
| BmgBI | CACGTC | 1 cut(s) | 365 |
| BmgT120I | GGNCC | 1 cut(s) | 657 |
| BmiI | GGNNCC | 4 cut(s) | 550, 658, 1516, 1561 |
| BmrFI | CCNGG | 1 cut(s) | 1124 |
| BmsI | GCATC | 4 cut(s) | 358, 878, 1158, 1578 |
| BmtI | GCTAGC | 1 cut(s) | 1442 |
| BpiI | GAAGAC | 1 cut(s) | 1343 |
| BpuEI | CTTGAG | 2 cut(s) | 1454, 1549 |
| BsaHI | GRCGYC | 1 cut(s) | 380 |
| BsaJI | CCNNGG | 2 cut(s) | 1163, 1579 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 160, 290 |
| Bse1I | ACTGG | 3 cut(s) | 592, 621, 1035 |
| Bse3DI | GCAATG | 2 cut(s) | 330, 636 |
| BseBI | CCWGG | 1 cut(s) | 1124 |
| BseDI | CCNNGG | 2 cut(s) | 1163, 1579 |
| BseGI | GGATG | 3 cut(s) | 96, 829, 1173 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 160, 290 |
| BseMI | GCAATG | 2 cut(s) | 330, 636 |
| BseMII | CTCAG | 3 cut(s) | 777, 1691, 1709 |
| BseNI | ACTGG | 3 cut(s) | 592, 621, 1035 |
| BsePI | GCGCGC | 2 cut(s) | 392, 1825 |
| BseRI | GAGGAG | 1 cut(s) | 1735 |
| BseXI | GCAGC | 6 cut(s) | 510, 580, 963, 1811, 1829, 1854 |
| BseYI | CCCAGC | 1 cut(s) | 86 |
| BsgI | GTGCAG | 1 cut(s) | 210 |
| Bsh1236I | CGCG | 2 cut(s) | 394, 1827 |
| Bsh1285I | CGRYCG | 2 cut(s) | 18, 1163 |
| BshFI | GGCC | 3 cut(s) | 283, 659, 1364 |
| BshNI | GGYRCC | 2 cut(s) | 548, 1514 |
| BsiEI | CGRYCG | 2 cut(s) | 18, 1163 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1500 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 160, 290 |
| BsmAI | GTCTC | 5 cut(s) | 355, 441, 1660, 1680, 1735 |
| BsmBI | CGTCTC | 1 cut(s) | 355 |
| BsmI | GAATGC | 1 cut(s) | 120 |
| BsnI | GGCC | 3 cut(s) | 283, 659, 1364 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1500 |
| Bsp143I | GATC | 9 cut(s) | 3, 121, 208, 310, 561, 766, 1139, 1144, 1559 |
| BspACI | CCGC | 7 cut(s) | 18, 521, 1083, 1357, 1365, 1518, 1840 |
| BspANI | GGCC | 3 cut(s) | 283, 659, 1364 |
| BspCNI | CTCAG | 3 cut(s) | 778, 1690, 1710 |
| BspFNI | CGCG | 2 cut(s) | 394, 1827 |
| BspHI | TCATGA | 1 cut(s) | 1344 |
| BspLI | GGNNCC | 4 cut(s) | 550, 658, 1516, 1561 |
| BspOI | GCTAGC | 1 cut(s) | 1442 |
| BspPI | GGATC | 5 cut(s) | 116, 203, 761, 1554, 1567 |
| BspQI | GCTCTTC | 2 cut(s) | 936, 1505 |
| BspT107I | GGYRCC | 2 cut(s) | 548, 1514 |
| BsrBI | CCGCTC | 1 cut(s) | 1367 |
| BsrDI | GCAATG | 2 cut(s) | 330, 636 |
| BsrI | ACTGG | 3 cut(s) | 592, 621, 1035 |
| BssECI | CCNNGG | 2 cut(s) | 1163, 1579 |
| BssHII | GCGCGC | 2 cut(s) | 392, 1825 |
| BssMI | GATC | 9 cut(s) | 3, 121, 208, 310, 561, 766, 1139, 1144, 1559 |
| BssNAI | GTATAC | 1 cut(s) | 1105 |
| BssNI | GRCGYC | 1 cut(s) | 380 |
| Bst1107I | GTATAC | 1 cut(s) | 1105 |
| Bst2UI | CCWGG | 1 cut(s) | 1124 |
| Bst4CI | ACNGT | 6 cut(s) | 300, 460, 761, 825, 1327, 1669 |
| Bst6I | CTCTTC | 4 cut(s) | 444, 936, 1320, 1505 |
| BstACI | GRCGYC | 1 cut(s) | 380 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1575 |
| BstC8I | GCNNGC | 5 cut(s) | 253, 394, 998, 1440, 1827 |
| BstDEI | CTNAG | 3 cut(s) | 786, 1677, 1718 |
| BstEII | GGTNACC | 1 cut(s) | 408 |
| BstF5I | GGATG | 3 cut(s) | 96, 829, 1173 |
| BstFNI | CGCG | 2 cut(s) | 394, 1827 |
| BstH2I | RGCGCY | 1 cut(s) | 1094 |
| BstHHI | GCGC | 5 cut(s) | 394, 396, 1093, 1827, 1829 |
| BstKTI | GATC | 9 cut(s) | 6, 124, 211, 313, 564, 769, 1142, 1147, 1562 |
| BstMAI | GTCTC | 5 cut(s) | 355, 441, 1660, 1680, 1735 |
| BstMBI | GATC | 9 cut(s) | 3, 121, 208, 310, 561, 766, 1139, 1144, 1559 |
| BstMCI | CGRYCG | 2 cut(s) | 18, 1163 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 1575, 1826 |
| BstNI | CCWGG | 1 cut(s) | 1124 |
| BstNSI | RCATGY | 1 cut(s) | 255 |
| BstPI | GGTNACC | 1 cut(s) | 408 |
| BstSCI | CCNGG | 1 cut(s) | 1122 |
| BstSFI | CTRYAG | 1 cut(s) | 1323 |
| BstUI | CGCG | 2 cut(s) | 394, 1827 |
| BstV1I | GCAGC | 6 cut(s) | 510, 580, 963, 1811, 1829, 1854 |
| BstV2I | GAAGAC | 1 cut(s) | 1343 |
| BstX2I | RGATCY | 2 cut(s) | 1139, 1559 |
| BstYI | RGATCY | 2 cut(s) | 1139, 1559 |
| BstZ17I | GTATAC | 1 cut(s) | 1105 |
| BsuRI | GGCC | 3 cut(s) | 283, 659, 1364 |
| BtrI | CACGTC | 1 cut(s) | 365 |
| BtsCI | GGATG | 3 cut(s) | 96, 829, 1173 |
| BtsI | GCAGTG | 1 cut(s) | 1527 |
| BtsIMutI | CAGTG | 2 cut(s) | 1527, 1711 |
| Cac8I | GCNNGC | 5 cut(s) | 253, 394, 998, 1440, 1827 |
| CaiI | CAGNNNCTG | 1 cut(s) | 197 |
| CciI | TCATGA | 1 cut(s) | 1344 |
| CfoI | GCGC | 5 cut(s) | 394, 396, 1093, 1827, 1829 |
| Cfr13I | GGNCC | 1 cut(s) | 657 |
| CseI | GACGC | 2 cut(s) | 560, 1555 |
| Csp6I | GTAC | 4 cut(s) | 144, 461, 1262, 1379 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 954, 989 |
| CviQI | GTAC | 4 cut(s) | 144, 461, 1262, 1379 |
| DdeI | CTNAG | 3 cut(s) | 786, 1677, 1718 |
| DpnI | GATC | 9 cut(s) | 5, 123, 210, 312, 563, 768, 1141, 1146, 1561 |
| DpnII | GATC | 9 cut(s) | 3, 121, 208, 310, 561, 766, 1139, 1144, 1559 |
| DraI | TTTAAA | 1 cut(s) | 715 |
| EaeI | YGGCCR | 2 cut(s) | 281, 1362 |
| Eam1104I | CTCTTC | 4 cut(s) | 444, 936, 1320, 1505 |
| EarI | CTCTTC | 4 cut(s) | 444, 936, 1320, 1505 |
| Eco91I | GGTNACC | 1 cut(s) | 408 |
| EcoO109I | RGGNCCY | 1 cut(s) | 657 |
| EcoO65I | GGTNACC | 1 cut(s) | 408 |
| EcoRII | CCWGG | 1 cut(s) | 1122 |
| Esp3I | CGTCTC | 1 cut(s) | 355 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1787, 1819 |
| FauI | CCCGC | 2 cut(s) | 1076, 1364 |
| FbaI | TGATCA | 3 cut(s) | 3, 561, 1144 |
| FblI | GTMKAC | 1 cut(s) | 1104 |
| Fnu4HI | GCNGC | 7 cut(s) | 524, 569, 977, 1365, 1800, 1818, 1843 |
| FokI | GGATG | 3 cut(s) | 103, 816, 1180 |
| Fsp4HI | GCNGC | 7 cut(s) | 524, 569, 977, 1365, 1800, 1818, 1843 |
| FspBI | CTAG | 4 cut(s) | 1100, 1184, 1439, 1772 |
| GlaI | GCGC | 5 cut(s) | 393, 395, 1092, 1826, 1828 |
| GluI | GCNGC | 7 cut(s) | 524, 569, 977, 1365, 1800, 1818, 1843 |
| GsaI | CCCAGC | 1 cut(s) | 90 |
| HaeII | RGCGCY | 1 cut(s) | 1094 |
| HaeIII | GGCC | 3 cut(s) | 283, 659, 1364 |
| HgaI | GACGC | 2 cut(s) | 560, 1555 |
| HhaI | GCGC | 5 cut(s) | 394, 396, 1093, 1827, 1829 |
| Hin1I | GRCGYC | 1 cut(s) | 380 |
| Hin6I | GCGC | 5 cut(s) | 392, 394, 1091, 1825, 1827 |
| HinP1I | GCGC | 5 cut(s) | 392, 394, 1091, 1825, 1827 |
| HincII | GTYRAC | 2 cut(s) | 682, 855 |
| HindII | GTYRAC | 2 cut(s) | 682, 855 |
| HinfI | GANTC | 5 cut(s) | 591, 958, 1119, 1180, 1348 |
| HphI | GGTGA | 3 cut(s) | 715, 776, 1189 |
| Hpy166II | GTNNAC | 4 cut(s) | 296, 682, 855, 1105 |
| Hpy188III | TCNNGA | 6 cut(s) | 154, 1131, 1184, 1345, 1433, 1472 |
| Hpy8I | GTNNAC | 4 cut(s) | 296, 682, 855, 1105 |
| Hpy99I | CGWCG | 1 cut(s) | 360 |
| HpyAV | CCTTC | 4 cut(s) | 670, 843, 850, 1225 |
| HpyCH4III | ACNGT | 6 cut(s) | 300, 460, 761, 825, 1327, 1669 |
| HpyCH4IV | ACGT | 4 cut(s) | 364, 380, 720, 1260 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 1575, 1826 |
| HpyF3I | CTNAG | 3 cut(s) | 786, 1677, 1718 |
| HpySE526I | ACGT | 4 cut(s) | 364, 380, 720, 1260 |
| Hsp92I | GRCGYC | 1 cut(s) | 380 |
| HspAI | GCGC | 5 cut(s) | 392, 394, 1091, 1825, 1827 |
| Ksp22I | TGATCA | 3 cut(s) | 3, 561, 1144 |
| Kzo9I | GATC | 9 cut(s) | 3, 121, 208, 310, 561, 766, 1139, 1144, 1559 |
| LguI | GCTCTTC | 2 cut(s) | 936, 1505 |
| LmnI | GCTCC | 3 cut(s) | 83, 1789, 1854 |
| Lsp1109I | GCAGC | 6 cut(s) | 510, 580, 963, 1811, 1829, 1854 |
| LweI | GCATC | 4 cut(s) | 358, 878, 1158, 1578 |
| MaeI | CTAG | 4 cut(s) | 1100, 1184, 1439, 1772 |
| MaeII | ACGT | 4 cut(s) | 364, 380, 720, 1260 |
| MaeIII | GTNAC | 2 cut(s) | 408, 1128 |
| MalI | GATC | 9 cut(s) | 5, 123, 210, 312, 563, 768, 1141, 1146, 1561 |
| MbiI | CCGCTC | 1 cut(s) | 1367 |
| MboI | GATC | 9 cut(s) | 3, 121, 208, 310, 561, 766, 1139, 1144, 1559 |
| MfeI | CAATTG | 1 cut(s) | 30 |
| MflI | RGATCY | 2 cut(s) | 1139, 1559 |
| MhlI | GDGCHC | 1 cut(s) | 1500 |
| MlsI | TGGCCA | 1 cut(s) | 283 |
| MluNI | TGGCCA | 1 cut(s) | 283 |
| MlyI | GAGTC | 1 cut(s) | 1357 |
| MmeI | TCCRAC | 4 cut(s) | 338, 1029, 1534, 1832 |
| Mox20I | TGGCCA | 1 cut(s) | 283 |
| MscI | TGGCCA | 1 cut(s) | 283 |
| MseI | TTAA | 6 cut(s) | 56, 387, 402, 692, 714, 1202 |
| MslI | CAYNNNNRTG | 2 cut(s) | 431, 1520 |
| Msp20I | TGGCCA | 1 cut(s) | 283 |
| MspA1I | CMGCKG | 2 cut(s) | 20, 523 |
| MspR9I | CCNGG | 1 cut(s) | 1124 |
| MunI | CAATTG | 1 cut(s) | 30 |
| Mva1269I | GAATGC | 1 cut(s) | 120 |
| MvaI | CCWGG | 1 cut(s) | 1124 |
| MvnI | CGCG | 2 cut(s) | 394, 1827 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 1575, 1826 |
| NdeII | GATC | 9 cut(s) | 3, 121, 208, 310, 561, 766, 1139, 1144, 1559 |
| NheI | GCTAGC | 1 cut(s) | 1438 |
| NlaIV | GGNNCC | 4 cut(s) | 550, 658, 1516, 1561 |
| NmuCI | GTSAC | 1 cut(s) | 1128 |
| NspI | RCATGY | 1 cut(s) | 255 |
| OliI | CACNNNNGTG | 1 cut(s) | 1520 |
| PaeI | GCATGC | 1 cut(s) | 255 |
| PagI | TCATGA | 1 cut(s) | 1344 |
| PauI | GCGCGC | 2 cut(s) | 392, 1825 |
| PciSI | GCTCTTC | 2 cut(s) | 936, 1505 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 361, 1587 |
| PctI | GAATGC | 1 cut(s) | 120 |
| PfeI | GAWTC | 4 cut(s) | 591, 958, 1119, 1180 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 290 |
| PkrI | GCNGC | 7 cut(s) | 525, 570, 978, 1366, 1801, 1819, 1844 |
| PleI | GAGTC | 1 cut(s) | 1356 |
| PpsI | GAGTC | 1 cut(s) | 1356 |
| PsiI | TTATAA | 1 cut(s) | 750 |
| Psp6I | CCWGG | 1 cut(s) | 1122 |
| PspEI | GGTNACC | 1 cut(s) | 408 |
| PspFI | CCCAGC | 1 cut(s) | 86 |
| PspGI | CCWGG | 1 cut(s) | 1122 |
| PspN4I | GGNNCC | 4 cut(s) | 550, 658, 1516, 1561 |
| PspPI | GGNCC | 1 cut(s) | 657 |
| PstNI | CAGNNNCTG | 1 cut(s) | 197 |
| PsuI | RGATCY | 2 cut(s) | 1139, 1559 |
| PteI | GCGCGC | 2 cut(s) | 392, 1825 |
| RsaI | GTAC | 4 cut(s) | 145, 462, 1263, 1380 |
| RsaNI | GTAC | 4 cut(s) | 144, 461, 1262, 1379 |
| RseI | CAYNNNNRTG | 2 cut(s) | 431, 1520 |
| SapI | GCTCTTC | 2 cut(s) | 936, 1505 |
| SaqAI | TTAA | 6 cut(s) | 56, 387, 402, 692, 714, 1202 |
| SatI | GCNGC | 7 cut(s) | 524, 569, 977, 1365, 1800, 1818, 1843 |
| Sau3AI | GATC | 9 cut(s) | 3, 121, 208, 310, 561, 766, 1139, 1144, 1559 |
| Sau96I | GGNCC | 1 cut(s) | 657 |
| SchI | GAGTC | 1 cut(s) | 1357 |
| ScrFI | CCNGG | 1 cut(s) | 1124 |
| SduI | GDGCHC | 1 cut(s) | 1500 |
| SfaNI | GCATC | 4 cut(s) | 358, 878, 1158, 1578 |
| SfcI | CTRYAG | 1 cut(s) | 1323 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 431, 1520 |
| SmlI | CTYRAG | 2 cut(s) | 1433, 1564 |
| SmoI | CTYRAG | 2 cut(s) | 1433, 1564 |
| SphI | GCATGC | 1 cut(s) | 255 |
| SsiI | CCGC | 7 cut(s) | 18, 521, 1083, 1357, 1365, 1518, 1840 |
| SspI | AATATT | 2 cut(s) | 102, 174 |
| SspMI | CTAG | 4 cut(s) | 1100, 1184, 1439, 1772 |
| StyD4I | CCNGG | 1 cut(s) | 1122 |
| TaaI | ACNGT | 6 cut(s) | 300, 460, 761, 825, 1327, 1669 |
| TaiI | ACGT | 4 cut(s) | 367, 383, 723, 1263 |
| TaqI | TCGA | 4 cut(s) | 49, 843, 906, 1471 |
| TaqII | GACCGA | 1 cut(s) | 1177 |
| TauI | GCSGC | 1 cut(s) | 1367 |
| TfiI | GAWTC | 4 cut(s) | 591, 958, 1119, 1180 |
| Tru1I | TTAA | 6 cut(s) | 56, 387, 402, 692, 714, 1202 |
| Tru9I | TTAA | 6 cut(s) | 56, 387, 402, 692, 714, 1202 |
| TscAI | CASTG | 2 cut(s) | 1527, 1711 |
| TseFI | GTSAC | 1 cut(s) | 1128 |
| TseI | GCWGC | 6 cut(s) | 523, 568, 976, 1799, 1817, 1842 |
| Tsp45I | GTSAC | 1 cut(s) | 1128 |
| TspDTI | ATGAA | 7 cut(s) | 622, 818, 828, 1412, 1431, 1492, 1585 |
| TspGWI | ACGGA | 1 cut(s) | 553 |
| TspRI | CASTG | 2 cut(s) | 1527, 1711 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 290 |
| XapI | RAATTY | 6 cut(s) | 52, 245, 725, 1003, 1419, 1736 |
| XbaI | TCTAGA | 1 cut(s) | 1183 |
| XceI | RCATGY | 1 cut(s) | 255 |
| XmiI | GTMKAC | 1 cut(s) | 1104 |
| XspI | CTAG | 4 cut(s) | 1100, 1184, 1439, 1772 |
| ZraI | GACGTC | 1 cut(s) | 381 |