Rw1G032510

Cyclic nucleotide-gated ion channel 1-like

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
Physical Location & Seq
Reverse (-)
60740160 .. 60745384
5225 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G032510.1

Sequence Viewer

Length: 2694 bp
ATGGACAACCCGGAAGTAGTTCTTTTTGTGGACAAGTCCTCGGAAGAGAGAGCTGCTAGCAGTACAACTGAACTTTCCAGGAAAAGTAAACAAGGAACAAGTAAAAAGTGGTCAACACTAATAGCGGAAATTCAAAGTGATAGAGCTGAAGCTGCTTCTTTTCTTCAAAAATGGAGGAAGATTTTTGTAACATCATGTGTGTTTGCTGTTTTATTGGATCCTTTGTTCCTCTACGTTCCAATTATCAGTCAGGATATGACGTGTTTGCGATTGGACGAAAACCTGAAGAAAGCAGCTCTTATCTTGCGATCTATTACTGACCTCTTTTATATAATGGACATCATTATTCAACTTCACAGATCTGATTGTGATAAGTGTCAGTATTTTTTAACAACGATAGCTAAGACGATTTGGTGGTCATACATCTTAATTGACATGTTAGCTATTCTCCCTCTTCCGCAGGTTCTAATTCTCCATTTCTTTTCGAAAATGAGGGGCTCAAGATCTTTAAATACAAGGAAGTTTATTATGAATTCTTTTGTTCTGATGCAATATGTGCCACGGGTTTTTCGCATCTACCAATTGTGCAAAGAGCCTAAAAAGTCTGTCCATGAAGAGAGTACTGCAATATGGGTTAAAGGTGTACTAAATTTGTTCATGTACATTCTTGCGAGTCATGTACTCGGAGCTGTATGGTATTTTTTGGCTGTCCAACGAATGACAATTTGCTGGCAGTATGCTTGTCGAAATGAAAACAAATGTGACACTAGTACTTTTAGCTGTTATGACCATGGTTCATTGATAAATATCACATTTATGAATGATATATGCCCCATTGATCCACCGAATGCAAAGCTTTTCGACTTTGGTATATTTCTTAGTTTGTTTCAATCTGGTATACCAAGGTCAACAAGTTTTCTACAGAAGTTCTCGAATTGCTTTTGTTGGGGCTTGCGCAATTTGAGTTCTCTCGGCTCAAACCTCCAGCCCAGTACGAATACATGGGAAAACTTCTTTGTGGCTTTTGTTTCTATAATGGGCTTGCTGCTGTTTATATACCTCATTGGAAATTTGCAGACATATATGCAGTTGGAGACTACAAGAATAGAGTCGCATAGACACAAGATGAAAATTAAACGAAAGATACAAGAGATAGGTCCGGAGATAGAATTGTGGTTATCTAAATCTGGCTTGCCTAAGAATCCAAAGGACAAAATAAAGCCGCAGATCATGGAAAAGGTACAACAAGTACTTGCAGAAAACAAGAATGCCGGTTTAGATCATATCATCTCTATTCTTCCCTCGGAACTTCGAAGGTATATCGAAAGTTTTTCGCCTTGGAATAGACTGAAACAGGAGCTAGTGCTTCAAACTATGGATGAAGAAGTGCTGAAAGTAATACGTGAACATCTTAAACCGATGAAGTATACTAAGAACAATGTCATTATTCAAGAGAATGAACCACTTGAAATGATGCTCATCATTGTGGAAGGACATCTAAGTATTGAAAAGAGAGATTACGCTAGTAATACACAGCGGGGTCCAACAGAATTATATGGAGAGAAACTTCTAACTTGGCCTTCATCAAGCTTCTTTCCTGGCAAATTACCCACAGCAGCAGAGTCTGCTAGGGCAATTGATGATGTTGAAGCCCTTGTTCTCATGGCCGACGACATGAAGAGTGTAGGCATTAAATTCAGGTCGCAGTTTACAGATTTCGCCAAATTCAAAGGTAGATTGTCTATTCATCTGGAAACTTCTACACCAGCACTTAGAATCTACACTGCAGAAGAACTTAAGAAGGCAACAAACAATTATCACGAAAGTGGAATCGTTGGTGCAGGAAGCTCTGCGACAATTCACAAAGGAATACTACCAAATCATGAAACAGCGGTTGCCATAAAGAAGTTCAAAAAATTTTCTGAATCATCCTACACTCATCAGGATGTAATAGATGAGATAGTTCTCAATTCTCGTCTGAACCACAAAAATGTGGTGAGGCTCTTAGGTTGTTGTCTAGAGTCAGAAGTACCTTCAATGGTTTTTGAGTTCATCACCAATGGCACTCTTGCTGAGCATGTTTATGACAAAAGCAAAGGATCAACAGTTACACTCCCATTGGAATTACGAATGAAGATAGCAGCGGAAACTGCAGGAGCACTAGCATACTTGCACTCCCTCACTATGCCAATCATACACCGAGATGTGAAGACAACAAGTATTCTGTTAGATGAAAATTACAGGGCAAAACTGATAGACTTTGGGATTTCACGAGTGTTGACCTCTATGGATAAAACTCATATATCAACTAATGTGAAAGGATCATTCGGATACTTGGACCCTGAATATTATCGTAGACAGGAACTAACACCGAAGAGTGACGTCTACAGCTTTGGAGTTGTCCTTGGGGAGCTACTAACAAGCAGAAAGGCAATTAATCGTGAGGAACCTTGCAAGAGAATTGCAGTCCTTGCGGAGTTGCTTAAAAGTTCAGTGGAAAAGGGTCGCTTGGACCAAATTCTTGATCAAGAAATTGTGAATGGGGAAAATATTGAGACCGCAAAAAAAGTTGCTGATCTCGCATACAGATGTTTAAGGGACAGTGGGGTGTCTAGGCCTTCCATGAAAGAAGTAGCAACAGAACTCGAGGGATTGGTGGGAGTTATTGCAAATAATCAAATTAATTTTCCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling

Protein Analysis

897

Amino Acids

102.22

Weight (kDa)

8.71

Isoelectric Point (pI)

41.46

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ion_trans PF00520 60 - 366 1.7e-09 Ion transport protein
Pkinase PF00069 606 - 879 1.1e-42 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 612 - 882 5.8e-40 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000017)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07351 FvH4_1g11800 FvH4_1g11800 FvH4_1g11800 FvH4_1g11800 FvH4_1g11800 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_4g14360 FvH4_6g13561 FvH4_6g13562 FvH4_6g13580 FvH4_6g13590 FvH4_6g13590 FvH4_6g13590 FvH4_6g13731 FvH4_6g13770 FvH4_6g13800 FvH4_6g13800 FvH4_6g13860 FvH4_6g13870 FvH4_6g13870 FvH4_6g13870 FvH4_6g13870 FvH4_6g13870 FvH4_6g13890 FvH4_6g33801 FvH4_7g13020 FvH4_7g13270 FvH4_7g13270 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g14580 FvH4_7g14580 FvH4_7g14580 FvH4_7g14600 FvH4_7g14600 FvH4_7g20030 FvH4_7g20510 FvH4_7g20510 FvH4_7g20510 FvH4_7g20670 FvH4_7g20670 FvH4_7g20670 FvH4_7g20670 FvH4_7g20690 FvH4_7g20690 FvH4_7g31930 FvH4_7g31930 FvH4_7g31940 FvH4_7g31940
malus_domestica MD01G1115700.v1.1 MD01G1115800.v1.1 MD01G1116600.v1.1 MD01G1116700.v1.1 MD01G1117000.v1.1 MD01G1225000.v1.1 MD02G1077900.v1.1 MD02G1078000.v1.1 MD02G1078200.v1.1 MD02G1078400.v1.1 MD02G1084300.v1.1 MD04G1004700.v1.1 MD04G1123100.v1.1 MD04G1123200.v1.1 MD04G1128000.v1.1 MD04G1128400.v1.1 MD05G1299700.v1.1 MD05G1300000.v1.1 MD07G1184000.v1.1 MD07G1292300.v1.1 MD08G1214800.v1.1
prunus_persica Prupe.1G205100_v2.0.a1 Prupe.1G205100_v2.0.a1 Prupe.1G205200_v2.0.a1 Prupe.2G222300_v2.0.a1 Prupe.2G223300_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223600_v2.0.a1 Prupe.2G223600_v2.0.a1 Prupe.2G223600_v2.0.a1 Prupe.2G223700_v2.0.a1 Prupe.2G223700_v2.0.a1 Prupe.2G223700_v2.0.a1 Prupe.2G223700_v2.0.a1 Prupe.2G223800_v2.0.a1 Prupe.2G223900_v2.0.a1 Prupe.2G224000_v2.0.a1 Prupe.5G162000_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G291000_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G210400_v2.0.a1 Prupe.7G210600_v2.0.a1 Prupe.7G210700_v2.0.a1 Prupe.7G210800_v2.0.a1 Prupe.7G210900_v2.0.a1 Prupe.8G097600_v2.0.a1 Prupe.8G097800_v2.0.a1 Prupe.8G097800_v2.0.a1
pyrus_communis pycom01g14430 pycom01g14440 pycom01g23130 pycom01g23160 pycom01g23330 pycom02g06210 pycom02g06220 pycom02g06250 pycom02g06270 pycom02g06710 pycom03g05360 pycom03g05380 pycom04g11470 pycom04g11480 pycom04g11520 pycom04g11560 pycom04g11600 pycom04g11610 pycom04g11650 pycom04g11660 pycom04g11670 pycom05g27790 pycom07g17630 pycom08g20960 pycom126g00020 pycom126g00030
rosa_chinensis RchiOBHm_Chr1g0318251 RchiOBHm_Chr1g0318731 RchiOBHm_Chr1g0339101 RchiOBHm_Chr1g0339111 RchiOBHm_Chr1g0347151 RchiOBHm_Chr1g0347161 RchiOBHm_Chr1g0347221 RchiOBHm_Chr1g0352401 RchiOBHm_Chr1g0352441 RchiOBHm_Chr1g0352461 RchiOBHm_Chr1g0356131 RchiOBHm_Chr1g0363991 RchiOBHm_Chr1g0364791 RchiOBHm_Chr1g0364801 RchiOBHm_Chr1g0364811 RchiOBHm_Chr1g0364851 RchiOBHm_Chr1g0364951 RchiOBHm_Chr1g0370821 RchiOBHm_Chr1g0381221 RchiOBHm_Chr1g0381231 RchiOBHm_Chr1g0381261 RchiOBHm_Chr1g0381271 RchiOBHm_Chr1g0381341 RchiOBHm_Chr1g0381351 RchiOBHm_Chr1g0381391 RchiOBHm_Chr1g0381801 RchiOBHm_Chr1g0381821 RchiOBHm_Chr2g0093241 RchiOBHm_Chr2g0116391 RchiOBHm_Chr3g0466441 RchiOBHm_Chr3g0466631 RchiOBHm_Chr3g0466651 RchiOBHm_Chr3g0496921 RchiOBHm_Chr4g0400441 RchiOBHm_Chr4g0400501 RchiOBHm_Chr4g0400511 RchiOBHm_Chr4g0400691 RchiOBHm_Chr4g0400701 RchiOBHm_Chr4g0404331 RchiOBHm_Chr5g0052101 RchiOBHm_Chr5g0052111 RchiOBHm_Chr5g0052171 RchiOBHm_Chr5g0052181 RchiOBHm_Chr6g0264161 RchiOBHm_Chr6g0265551 RchiOBHm_Chr7g0213571 RchiOBHm_Chr7g0213581
rosa_laevigata RLG00000002796 RLG00000003261 RLG00000007935 RLG00000007936 RLG00000009187 RLG00000014179 RLG00000016381 RLG00000018265 RLG00000024558 RLG00000024574 RLG00000026232 RLG00000026234 RLG00000026236 RLG00000026237 RLG00000027459 RLG00000027461 RLG00000027463 RLG00000027530 RLG00000028103 RLG00000028304 RLG00000028333 RLG00000029214 RLG00000029848 RLG00000029951 RLG00000030115 RLG00000030552 RLG00000033668 RLG00000034840 RLG00000034841 RLG00000034842 RLG00000035830
rosa_multiflora Rmu_sc0000654.1_g000004 Rmu_sc0000675.1_g000025 Rmu_sc0001075.1_g000002 Rmu_sc0001726.1_g000004 Rmu_sc0001772.1_g000061 Rmu_sc0001772.1_g000065 Rmu_sc0002067.1_g000002 Rmu_sc0002183.1_g000001 Rmu_sc0002183.1_g000006 Rmu_sc0002244.1_g000003 Rmu_sc0002313.1_g000004 Rmu_sc0002319.1_g000004 Rmu_sc0002539.1_g000085 Rmu_sc0002636.1_g000004 Rmu_sc0003229.1_g000007 Rmu_sc0003313.1_g000020 Rmu_sc0003546.1_g000007 Rmu_sc0003724.1_g000015 Rmu_sc0003936.1_g000029 Rmu_sc0004191.1_g000067 Rmu_sc0004525.1_g000012 Rmu_sc0005122.1_g000009 Rmu_sc0005255.1_g000040 Rmu_sc0005338.1_g000016 Rmu_sc0005584.1_g000008 Rmu_sc0006460.1_g000013 Rmu_sc0006872.1_g000011 Rmu_sc0006872.1_g000015 Rmu_sc0006872.1_g000016 Rmu_sc0006952.1_g000013 Rmu_sc0007342.1_g000005 Rmu_sc0007342.1_g000006 Rmu_sc0008418.1_g000003 Rmu_sc0008418.1_g000006 Rmu_sc0008636.1_g000007 Rmu_sc0008636.1_g000008 Rmu_sc0009205.1_g000014 Rmu_sc0009365.1_g000014 Rmu_sc0009917.1_g000002 Rmu_sc0019289.1_g000003 Rmu_ssc0000098.1_g000011 Rmu_ssc0000098.1_g000012 Rmu_ssc0000167.1_g000018 Rmu_ssc0000167.1_g000024 Rmu_ssc0000326.1_g000015
rosa_roxburghii Rroxscaffold_166G00440780 Rroxscaffold_176G00431500 Rroxscaffold_1G00015080 Rroxscaffold_1G00027880 Rroxscaffold_1G00027890 Rroxscaffold_1G00027920 Rroxscaffold_2G00127250 Rroxscaffold_2G00148380 Rroxscaffold_3G00219450 Rroxscaffold_3G00232170 Rroxscaffold_3G00232210 Rroxscaffold_3G00242230 Rroxscaffold_3G00242240 Rroxscaffold_3G00244790 Rroxscaffold_3G00245790 Rroxscaffold_4G00278400 Rroxscaffold_4G00278430 Rroxscaffold_4G00278670 Rroxscaffold_4G00278680 Rroxscaffold_4G00278690 Rroxscaffold_4G00278700 Rroxscaffold_4G00278720 Rroxscaffold_4G00291690 Rroxscaffold_4G00292070 Rroxscaffold_4G00292090 Rroxscaffold_4G00292770 Rroxscaffold_4G00302240 Rroxscaffold_4G00302860 Rroxscaffold_4G00311320 Rroxscaffold_4G00311330 Rroxscaffold_4G00320570 Rroxscaffold_4G00322050 Rroxscaffold_4G00329480 Rroxscaffold_4G00329730 Rroxscaffold_5G00345500 Rroxscaffold_5G00345510 Rroxscaffold_5G00360830 Rroxscaffold_5G00360840 Rroxscaffold_6G00393450 Rroxscaffold_6G00404030 Rroxscaffold_6G00414220 Rroxscaffold_6G00414230 Rroxscaffold_6G00414280 Rroxscaffold_6G00414290 Rroxscaffold_6G00414350 Rroxscaffold_6G00414470 Rroxscaffold_7G00202570 Rroxscaffold_7G00203460 Rroxscaffold_7G00203470
rosa_rugosa Rorug01G0020500 Rorug01G0020600 Rorug01G0020700 Rorug01G0143700.1 Rorug01G0225700 Rorug01G0228500 Rorug01G0228600 Rorug01G0228600 Rorug01G0228700 Rorug01G0228800 Rorug01G0228800 Rorug01G0229000 Rorug01G0229300 Rorug01G0229400 Rorug01G0229600 Rorug01G0229700 Rorug01G0232200 Rorug01G0232600 Rorug01G0232600 Rorug01G0311900 Rorug01G0311900 Rorug01G0318400 Rorug01G0318500 Rorug01G0318500 Rorug01G0318500 Rorug01G0427900 Rorug01G0427900 Rorug01G0428000 Rorug01G0428200 Rorug01G0428300 Rorug01G0428400 Rorug01G0431500 Rorug01G0431600 Rorug01G0431600 Rorug02G0033800 Rorug02G0206300 Rorug03G0081900 Rorug03G0083200 Rorug03G0083200 Rorug03G0083300 Rorug04G0025100 Rorug04G0025100 Rorug04G0025200 Rorug04G0025300 Rorug04G0058600 Rorug04G0058700 Rorug04G0058800 Rorug04G0098400 Rorug04G0098500 Rorug05G0274500 Rorug05G0274600 Rorug05G0274800 Rorug06G0008500 Rorug06G0009100 Rorug06G0018000
rosa_samantha Rh1AG031700 Rh1AG036100 Rh1AG089800 Rh1AG239800 Rh1AG239900 Rh1AG242000 Rh1AG242300 Rh1AG245600 Rh1AG262600 Rh1AG319700 Rh1AG319800 Rh1AG319900 Rh1AG327200 Rh1AG451100 Rh1AG451200 Rh1AG451300 Rh1AG451600 Rh1AG451700 Rh1BG027200 Rh1BG071600 Rh1BG090700 Rh1BG211000 Rh1BG213000 Rh1BG213500 Rh1BG282800 Rh1BG288400 Rh1BG408100 Rh1BG408200 Rh1BG408400 Rh1BG408700 Rh1CG026300 Rh1CG028300 Rh1CG224100 Rh1CG226000 Rh1CG226100 Rh1CG229300 Rh1CG229400 Rh1CG245900 Rh1CG299200 Rh1CG299400 Rh1CG299500 Rh1CG303300 Rh1CG305100 Rh1CG422500 Rh1CG422600 Rh1CG422700 Rh1CG422800 Rh1CG422900 Rh1CG423100 Rh1CG423300 Rh1CG423400 Rh1CG426300 Rh1CG426600 Rh1DG239300 Rh1DG239600 Rh1DG258300 Rh1DG314200 Rh1DG314300 Rh1DG314400 Rh1DG320000 Rh1DG439200 Rh1DG439400 Rh1DG439500 Rh1DG439700 Rh1DG440000 Rh1DG443800 Rh2AG261800 Rh2BG080900 Rh2CG083300 Rh2DG078900 Rh2DG270000 Rh2DG270100 Rh3AG128400 Rh3AG130100 Rh3AG130500 Rh3AG332500 Rh3AG332600 Rh3AG332800 Rh3BG149700 Rh3BG151500 Rh3CG151400 Rh3CG354500 Rh3CG366800 Rh3DG150500 Rh3DG152200 Rh4AG101400 Rh4AG102900 Rh4AG148300 Rh4AG148600 Rh4BG098000 Rh4CG111100 Rh4CG111300 Rh4CG155100 Rh4DG094800 Rh5AG213600 Rh5AG346900 Rh5AG347000 Rh5BG357500 Rh5BG357700 Rh5BG485400 Rh5CG383100 Rh5CG383200 Rh5CG383300 Rh5CG509900 Rh5DG373000 Rh5DG373200 Rh6BG054300 Rh6BG126300 Rh6CG125100 Rh6CG185300 Rh6DG177000 Rh7AG276100 Rh7AG276200 Rh7BG230500 Rh7BG270500 Rh7BG364000 Rh7CG250100 Rh7CG295200 Rh7CG295300 Rh7DG389700
rosa_wichuraiana Rw0G001190 Rw0G010680 Rw0G013360 Rw0G014310 Rw0G014890 Rw0G020310 Rw0G021350 Rw0G022510 Rw1G003360 Rw1G004330 Rw1G006930 Rw1G008310 Rw1G021090 Rw1G021150 Rw1G021210 Rw1G023200 Rw1G023210 Rw1G028340 Rw1G028350 Rw1G028990 Rw1G032510 Rw1G039370 Rw1G039400 Rw1G039410 Rw1G039420 Rw1G039430 Rw2G006700 Rw2G020550 Rw2G020580 Rw3G012130 Rw3G012300 Rw3G012310 Rw3G028220 Rw3G029230 Rw5G021600 Rw5G032790 Rw6G011240 Rw7G027670 Rw7G032780

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 2385
Acc16I TGCGCA 1 cut(s) 956
Acc36I ACCTGC 1 cut(s) 451
AccI GTMKAC 4 cut(s) 898, 1427, 2356, 2385
AccIII TCCGGA 1 cut(s) 1159
AciI CCGC 8 cut(s) 125, 458, 1223, 1537, 1892, 2144, 2474, 2559
AclWI GGATC 5 cut(s) 212, 225, 833, 2107, 2329
AcoI YGGCCR 1 cut(s) 1665
AcsI RAATTY 8 cut(s) 129, 532, 649, 1069, 1694, 1724, 1916, 2517
AcuI CTGAAG 2 cut(s) 168, 305
AcyI GRCGYC 1 cut(s) 2382
AflII CTTAAG 1 cut(s) 1796
AflIII ACRYGT 2 cut(s) 260, 435
AhlI ACTAGT 1 cut(s) 767
AjiI CACGTC 1 cut(s) 261
AjnI CCWGG 2 cut(s) 77, 1597
AleI CACNNNNGTG 1 cut(s) 1824
AloI GAACNNNNNNTCC 2 cut(s) 209, 241
Alw21I GWGCWC 1 cut(s) 2161
Alw26I GTCTC 2 cut(s) 1088, 2549
AlwI GGATC 5 cut(s) 212, 225, 833, 2107, 2329
AlwNI CAGNNNCTG 1 cut(s) 1625
Ama87I CYCGRG 1 cut(s) 2645
Aor13HI TCCGGA 1 cut(s) 1159
AoxI GGCC 3 cut(s) 1577, 1665, 2615
ApeKI GCWGC 6 cut(s) 53, 152, 293, 1045, 1616, 2141
ApoI RAATTY 8 cut(s) 129, 532, 649, 1069, 1694, 1724, 1916, 2517
AseI ATTAAT 2 cut(s) 2436, 2682
Asp700I GAANNNNTTC 1 cut(s) 18
AspLEI GCGC 1 cut(s) 957
AspS9I GGNCC 4 cut(s) 1157, 1541, 2338, 2512
AsuC2I CCSGG 1 cut(s) 11
AsuHPI GGTGA 2 cut(s) 2008, 2047
AsuII TTCGAA 2 cut(s) 485, 1312
AsuNHI GCTAGC 1 cut(s) 56
AvaI CYCGRG 1 cut(s) 2645
AvaII GGWCC 4 cut(s) 1157, 1541, 2338, 2512
BamHI GGATCC 1 cut(s) 217
BanII GRGCYC 1 cut(s) 500
BauI CACGAG 1 cut(s) 2271
BbsI GAAGAC 1 cut(s) 2216
Bbv12I GWGCWC 1 cut(s) 2161
BbvI GCAGC 6 cut(s) 40, 139, 305, 1032, 1628, 2153
BciT130I CCWGG 2 cut(s) 79, 1599
BciVI GTATCC 1 cut(s) 2324
BclI TGATCA 1 cut(s) 2524
BcnI CCSGG 1 cut(s) 11
BcoDI GTCTC 2 cut(s) 1088, 2549
BcuI ACTAGT 1 cut(s) 767
BfaI CTAG 8 cut(s) 57, 768, 1361, 1524, 1629, 2018, 2162, 2613
BfmI CTRYAG 4 cut(s) 920, 1785, 2151, 2386
BfrI CTTAAG 1 cut(s) 1796
BfuAI ACCTGC 1 cut(s) 451
BfuI GTATCC 1 cut(s) 2324
BglII AGATCT 2 cut(s) 359, 503
BisI GCNGC 7 cut(s) 54, 153, 294, 1046, 1223, 1617, 2142
BlpI GCTNAGC 1 cut(s) 2073
BlsI GCNGC 7 cut(s) 55, 154, 295, 1047, 1224, 1618, 2143
BmcAI AGTACT 3 cut(s) 622, 772, 1251
Bme1390I CCNGG 3 cut(s) 11, 79, 1599
Bme18I GGWCC 4 cut(s) 1157, 1541, 2338, 2512
BmeT110I CYCGRG 1 cut(s) 2645
BmgBI CACGTC 1 cut(s) 261
BmgT120I GGNCC 4 cut(s) 1157, 1541, 2338, 2512
BmiI GGNNCC 4 cut(s) 219, 1542, 2340, 2448
BmrFI CCNGG 3 cut(s) 11, 79, 1599
BmrI ACTGGG 1 cut(s) 984
BmsI GCATC 3 cut(s) 537, 582, 1464
BmtI GCTAGC 1 cut(s) 60
BmuI ACTGGG 1 cut(s) 984
BpiI GAAGAC 1 cut(s) 2216
BpmI CTGGAG 1 cut(s) 968
Bpu1102I GCTNAGC 1 cut(s) 2073
Bpu14I TTCGAA 2 cut(s) 485, 1312
BpuEI CTTGAG 1 cut(s) 484
BpuMI CCSGG 1 cut(s) 11
BsaAI YACGTR 1 cut(s) 1403
BsaBI GATNNNNATC 2 cut(s) 806, 1478
BsaHI GRCGYC 1 cut(s) 2382
BsaI GGTCTC 1 cut(s) 2549
BsaJI CCNNGG 7 cut(s) 39, 560, 790, 902, 1302, 1337, 2404
BsaWI WCCGGW 1 cut(s) 1159
BsaXI ACNNNNNCTCC 2 cut(s) 2159, 2189
Bse118I RCCGGY 1 cut(s) 1271
Bse1I ACTGG 1 cut(s) 990
Bse8I GATNNNNATC 2 cut(s) 806, 1478
BseAI TCCGGA 1 cut(s) 1159
BseBI CCWGG 2 cut(s) 79, 1599
BseDI CCNNGG 7 cut(s) 39, 560, 790, 902, 1302, 1337, 2404
BseGI GGATG 3 cut(s) 1384, 1928, 1951
BseJI GATNNNNATC 2 cut(s) 806, 1478
BseMII CTCAG 1 cut(s) 2064
BseNI ACTGG 1 cut(s) 990
BseXI GCAGC 6 cut(s) 40, 139, 305, 1032, 1628, 2153
BsgI GTGCAG 1 cut(s) 1860
BshFI GGCC 3 cut(s) 1579, 1667, 2617
BsiHKAI GWGCWC 1 cut(s) 2161
BsiHKCI CYCGRG 1 cut(s) 2645
BsiSI CCGG 3 cut(s) 11, 1160, 1272
BslFI GGGAC 1 cut(s) 2612
BsmAI GTCTC 2 cut(s) 1088, 2549
BsmFI GGGAC 1 cut(s) 2612
BsmI GAATGC 2 cut(s) 853, 1273
BsnI GGCC 3 cut(s) 1579, 1667, 2617
Bso31I GGTCTC 1 cut(s) 2549
BsoBI CYCGRG 1 cut(s) 2645
Bsp119I TTCGAA 2 cut(s) 485, 1312
Bsp1286I GDGCHC 2 cut(s) 500, 2161
Bsp13I TCCGGA 1 cut(s) 1159
Bsp1407I TGTACA 1 cut(s) 660
Bsp1720I GCTNAGC 1 cut(s) 2073
Bsp19I CCATGG 1 cut(s) 790
BspACI CCGC 8 cut(s) 125, 458, 1223, 1537, 1892, 2144, 2474, 2559
BspANI GGCC 3 cut(s) 1579, 1667, 2617
BspCNI CTCAG 1 cut(s) 2065
BspEI TCCGGA 1 cut(s) 1159
BspHI TCATGA 1 cut(s) 1882
BspLI GGNNCC 4 cut(s) 219, 1542, 2340, 2448
BspMAI CTGCAG 2 cut(s) 1789, 2155
BspMI ACCTGC 1 cut(s) 451
BspOI GCTAGC 1 cut(s) 60
BspPI GGATC 5 cut(s) 212, 225, 833, 2107, 2329
BspT104I TTCGAA 2 cut(s) 485, 1312
BspTI CTTAAG 1 cut(s) 1796
BspTNI GGTCTC 1 cut(s) 2549
BsrFI RCCGGY 1 cut(s) 1271
BsrGI TGTACA 1 cut(s) 660
BsrI ACTGG 1 cut(s) 990
BssAI RCCGGY 1 cut(s) 1271
BssECI CCNNGG 7 cut(s) 39, 560, 790, 902, 1302, 1337, 2404
BssNAI GTATAC 2 cut(s) 899, 1428
BssNI GRCGYC 1 cut(s) 2382
BssSI CACGAG 1 cut(s) 2271
BssT1I CCWWGG 4 cut(s) 790, 902, 1337, 2404
Bst1107I GTATAC 2 cut(s) 899, 1428
Bst2BI CACGAG 1 cut(s) 2271
Bst2UI CCWGG 2 cut(s) 79, 1599
Bst4CI ACNGT 2 cut(s) 2107, 2603
Bst6I CTCTTC 5 cut(s) 39, 459, 609, 1673, 2369
BstACI GRCGYC 1 cut(s) 2382
BstAFI CTTAAG 1 cut(s) 1796
BstAPI GCANNNNNTGC 3 cut(s) 556, 1625, 2471
BstAUI TGTACA 1 cut(s) 660
BstBAI YACGTR 1 cut(s) 1403
BstBI TTCGAA 2 cut(s) 485, 1312
BstC8I GCNNGC 5 cut(s) 58, 731, 953, 1043, 1193
BstDEI CTNAG 8 cut(s) 402, 878, 1197, 1431, 1499, 1772, 2005, 2073
BstDSI CCRYGG 2 cut(s) 560, 790
BstF5I GGATG 3 cut(s) 1384, 1928, 1951
BstHHI GCGC 1 cut(s) 957
BstMAI GTCTC 2 cut(s) 1088, 2549
BstMWI GCNNNNNNNGC 6 cut(s) 152, 556, 1625, 2150, 2471, 2579
BstNI CCWGG 2 cut(s) 79, 1599
BstNSI RCATGY 2 cut(s) 439, 2081
BstSCI CCNGG 3 cut(s) 9, 77, 1597
BstSFI CTRYAG 4 cut(s) 920, 1785, 2151, 2386
BstV1I GCAGC 6 cut(s) 40, 139, 305, 1032, 1628, 2153
BstV2I GAAGAC 1 cut(s) 2216
BstX2I RGATCY 3 cut(s) 217, 359, 503
BstYI RGATCY 3 cut(s) 217, 359, 503
BstZ17I GTATAC 2 cut(s) 899, 1428
BsuI GTATCC 1 cut(s) 2324
BsuRI GGCC 3 cut(s) 1579, 1667, 2617
BtgI CCRYGG 2 cut(s) 560, 790
BtrI CACGTC 1 cut(s) 261
BtsCI GGATG 3 cut(s) 1384, 1928, 1951
BtsI GCAGTG 1 cut(s) 1782
BtsIMutI CAGTG 3 cut(s) 1782, 2499, 2608
BveI ACCTGC 1 cut(s) 451
Cac8I GCNNGC 5 cut(s) 58, 731, 953, 1043, 1193
CaiI CAGNNNCTG 1 cut(s) 1625
CciI TCATGA 1 cut(s) 1882
CfoI GCGC 1 cut(s) 957
Cfr10I RCCGGY 1 cut(s) 1271
Cfr13I GGNCC 4 cut(s) 1157, 1541, 2338, 2512
DdeI CTNAG 8 cut(s) 402, 878, 1197, 1431, 1499, 1772, 2005, 2073
DraI TTTAAA 1 cut(s) 510
EaeI YGGCCR 1 cut(s) 1665
Eam1104I CTCTTC 5 cut(s) 39, 459, 609, 1673, 2369
EarI CTCTTC 5 cut(s) 39, 459, 609, 1673, 2369
Eco130I CCWWGG 4 cut(s) 790, 902, 1337, 2404
Eco147I AGGCCT 1 cut(s) 2617
Eco24I GRGCYC 1 cut(s) 500
Eco31I GGTCTC 1 cut(s) 2549
Eco47I GGWCC 4 cut(s) 1157, 1541, 2338, 2512
Eco57I CTGAAG 2 cut(s) 168, 305
Eco88I CYCGRG 1 cut(s) 2645
EcoRI GAATTC 1 cut(s) 532
EcoRII CCWGG 2 cut(s) 77, 1597
EcoT14I CCWWGG 4 cut(s) 790, 902, 1337, 2404
EcoT38I GRGCYC 1 cut(s) 500
ErhI CCWWGG 4 cut(s) 790, 902, 1337, 2404
FalI AAGNNNNNCTT 5 cut(s) 38, 282, 314, 2492, 2524
FaqI GGGAC 1 cut(s) 2612
FauI CCCGC 1 cut(s) 1530
FbaI TGATCA 1 cut(s) 2524
FblI GTMKAC 4 cut(s) 898, 1427, 2356, 2385
Fnu4HI GCNGC 7 cut(s) 54, 153, 294, 1046, 1223, 1617, 2142
FokI GGATG 3 cut(s) 1391, 1915, 1958
FriOI GRGCYC 1 cut(s) 500
Fsp4HI GCNGC 7 cut(s) 54, 153, 294, 1046, 1223, 1617, 2142
FspBI CTAG 8 cut(s) 57, 768, 1361, 1524, 1629, 2018, 2162, 2613
FspI TGCGCA 1 cut(s) 956
GlaI GCGC 1 cut(s) 956
GluI GCNGC 7 cut(s) 54, 153, 294, 1046, 1223, 1617, 2142
GsuI CTGGAG 1 cut(s) 968
HaeIII GGCC 3 cut(s) 1579, 1667, 2617
HapII CCGG 3 cut(s) 11, 1160, 1272
HhaI GCGC 1 cut(s) 957
Hin1I GRCGYC 1 cut(s) 2382
Hin6I GCGC 1 cut(s) 955
HinP1I GCGC 1 cut(s) 955
HincII GTYRAC 3 cut(s) 114, 909, 2280
HindII GTYRAC 3 cut(s) 114, 909, 2280
HindIII AAGCTT 2 cut(s) 854, 1588
HinfI GANTC 8 cut(s) 673, 1109, 1201, 1622, 1776, 1830, 1925, 2021
HpaII CCGG 3 cut(s) 11, 1160, 1272
HphI GGTGA 2 cut(s) 2008, 2047
Hpy188I TCNGA 9 cut(s) 43, 364, 546, 686, 1306, 1924, 1980, 2026, 2330
Hpy99I CGWCG 1 cut(s) 1673
HpyAV CCTTC 6 cut(s) 1308, 1484, 1590, 1795, 2043, 2628
HpyCH4III ACNGT 2 cut(s) 2107, 2603
HpyCH4IV ACGT 4 cut(s) 234, 260, 1402, 2382
HpyF10VI GCNNNNNNNGC 6 cut(s) 152, 556, 1625, 2150, 2471, 2579
HpyF3I CTNAG 8 cut(s) 402, 878, 1197, 1431, 1499, 1772, 2005, 2073
HpySE526I ACGT 4 cut(s) 234, 260, 1402, 2382
Hsp92I GRCGYC 1 cut(s) 2382
HspAI GCGC 1 cut(s) 955
Kpn2I TCCGGA 1 cut(s) 1159
Ksp22I TGATCA 1 cut(s) 2524
LmnI GCTCC 4 cut(s) 686, 1357, 2156, 2410
Lsp1109I GCAGC 6 cut(s) 40, 139, 305, 1032, 1628, 2153
LweI GCATC 3 cut(s) 537, 582, 1464
MaeI CTAG 8 cut(s) 57, 768, 1361, 1524, 1629, 2018, 2162, 2613
MaeII ACGT 4 cut(s) 234, 260, 1402, 2382
MaeIII GTNAC 4 cut(s) 187, 761, 2107, 2378
MfeI CAATTG 2 cut(s) 581, 1635
MflI RGATCY 3 cut(s) 217, 359, 503
MhlI GDGCHC 2 cut(s) 500, 2161
MlyI GAGTC 4 cut(s) 682, 1118, 1631, 2030
MmeI TCCRAC 3 cut(s) 736, 1071, 1568
MroI TCCGGA 1 cut(s) 1159
MroXI GAANNNNTTC 1 cut(s) 18
MslI CAYNNNNRTG 8 cut(s) 815, 1484, 1824, 1944, 1989, 2082, 2202, 2587
MspA1I CMGCKG 3 cut(s) 1537, 1892, 2144
MspCI CTTAAG 1 cut(s) 1796
MspI CCGG 3 cut(s) 11, 1160, 1272
MspR9I CCNGG 3 cut(s) 11, 79, 1599
MunI CAATTG 2 cut(s) 581, 1635
Mva1269I GAATGC 2 cut(s) 853, 1273
MvaI CCWGG 2 cut(s) 79, 1599
MwoI GCNNNNNNNGC 6 cut(s) 152, 556, 1625, 2150, 2471, 2579
NciI CCSGG 1 cut(s) 11
NcoI CCATGG 1 cut(s) 790
NheI GCTAGC 1 cut(s) 56
NlaIV GGNNCC 4 cut(s) 219, 1542, 2340, 2448
NmeAIII GCCGAG 1 cut(s) 951
NmuCI GTSAC 2 cut(s) 761, 2378
NsbI TGCGCA 1 cut(s) 956
NspI RCATGY 2 cut(s) 439, 2081
NspV TTCGAA 2 cut(s) 485, 1312
OliI CACNNNNGTG 1 cut(s) 1824
PaeR7I CTCGAG 1 cut(s) 2645
PagI TCATGA 1 cut(s) 1882
PceI AGGCCT 1 cut(s) 2617
PciI ACATGT 1 cut(s) 435
PctI GAATGC 2 cut(s) 853, 1273
PdmI GAANNNNTTC 1 cut(s) 18
PfeI GAWTC 4 cut(s) 1201, 1776, 1830, 1925
PfoI TCCNGGA 1 cut(s) 77
PkrI GCNGC 7 cut(s) 55, 154, 295, 1047, 1224, 1618, 2143
PleI GAGTC 4 cut(s) 681, 1117, 1630, 2029
PpsI GAGTC 4 cut(s) 681, 1117, 1630, 2029
Ppu21I YACGTR 1 cut(s) 1403
PscI ACATGT 1 cut(s) 435
PshBI ATTAAT 2 cut(s) 2436, 2682
Psp6I CCWGG 2 cut(s) 77, 1597
PspGI CCWGG 2 cut(s) 77, 1597
PspN4I GGNNCC 4 cut(s) 219, 1542, 2340, 2448
PspPI GGNCC 4 cut(s) 1157, 1541, 2338, 2512
PspXI VCTCGAGB 1 cut(s) 2645
PstI CTGCAG 2 cut(s) 1789, 2155
PstNI CAGNNNCTG 1 cut(s) 1625
PsuI RGATCY 3 cut(s) 217, 359, 503
RseI CAYNNNNRTG 8 cut(s) 815, 1484, 1824, 1944, 1989, 2082, 2202, 2587
SatI GCNGC 7 cut(s) 54, 153, 294, 1046, 1223, 1617, 2142
Sau96I GGNCC 4 cut(s) 1157, 1541, 2338, 2512
ScaI AGTACT 3 cut(s) 622, 772, 1251
SchI GAGTC 4 cut(s) 682, 1118, 1631, 2030
ScrFI CCNGG 3 cut(s) 11, 79, 1599
SduI GDGCHC 2 cut(s) 500, 2161
SfaNI GCATC 3 cut(s) 537, 582, 1464
SfcI CTRYAG 4 cut(s) 920, 1785, 2151, 2386
Sfr274I CTCGAG 1 cut(s) 2645
SfuI TTCGAA 2 cut(s) 485, 1312
SinI GGWCC 4 cut(s) 1157, 1541, 2338, 2512
SlaI CTCGAG 1 cut(s) 2645
SmiMI CAYNNNNRTG 8 cut(s) 815, 1484, 1824, 1944, 1989, 2082, 2202, 2587
SmlI CTYRAG 3 cut(s) 499, 1796, 2645
SmoI CTYRAG 3 cut(s) 499, 1796, 2645
SpeI ACTAGT 1 cut(s) 767
SseBI AGGCCT 1 cut(s) 2617
SsiI CCGC 8 cut(s) 125, 458, 1223, 1537, 1892, 2144, 2474, 2559
SspI AATATT 2 cut(s) 2348, 2551
SspMI CTAG 8 cut(s) 57, 768, 1361, 1524, 1629, 2018, 2162, 2613
StuI AGGCCT 1 cut(s) 2617
StyD4I CCNGG 3 cut(s) 9, 77, 1597
StyI CCWWGG 4 cut(s) 790, 902, 1337, 2404
TaaI ACNGT 2 cut(s) 2107, 2603
TaiI ACGT 4 cut(s) 237, 263, 1405, 2385
TaqI TCGA 7 cut(s) 485, 745, 861, 932, 1312, 1323, 2646
TatI WGTACW 7 cut(s) 62, 620, 643, 660, 679, 770, 1249
TauI GCSGC 1 cut(s) 1225
TfiI GAWTC 4 cut(s) 1201, 1776, 1830, 1925
TscAI CASTG 3 cut(s) 1789, 2499, 2608
TseFI GTSAC 2 cut(s) 761, 2378
TseI GCWGC 6 cut(s) 53, 152, 293, 1045, 1616, 2141
Tsp45I GTSAC 2 cut(s) 761, 2378
TspRI CASTG 3 cut(s) 1789, 2499, 2608
Vha464I CTTAAG 1 cut(s) 1796
VpaK11BI GGWCC 4 cut(s) 1157, 1541, 2338, 2512
VspI ATTAAT 2 cut(s) 2436, 2682
XapI RAATTY 8 cut(s) 129, 532, 649, 1069, 1694, 1724, 1916, 2517
XbaI TCTAGA 1 cut(s) 2017
XceI RCATGY 2 cut(s) 439, 2081
XhoI CTCGAG 1 cut(s) 2645
XmiI GTMKAC 4 cut(s) 898, 1427, 2356, 2385
XmnI GAANNNNTTC 1 cut(s) 18
XspI CTAG 8 cut(s) 57, 768, 1361, 1524, 1629, 2018, 2162, 2613
ZraI GACGTC 1 cut(s) 2383
ZrmI AGTACT 3 cut(s) 622, 772, 1251
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.