Prupe.7G210900_v2.0.a1

Cyclic nucleotide-gated ion channel 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
OG0000017
Physical Location & Seq
Forward (+)
19292414 .. 19300725
8312 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G210900.1

Sequence Viewer

Length: 1503 bp
ATGGCGGACTCCAATGATGACTCAACAGCCATAAGTGTTGATCATGATGAAGCTGGAGCGCACAGATCAAGTGGACAATGGCCAACAACAGAGGAGATTCTTGGTCCACATGATGAGCAGCCAGCAACGACTTTCCTCCGAAAGTGGGATATAGTATTTACGATATCATGTGTATTTGCTGTCTTCCTTGATCCTTTTTACCCTTACATTACTGTCCTAGATGAGGACCGTACGTGCTACCATTTGGACCCATACTTGTTGTGGCCATTTTTTGGCTTACGATCCGCCCTAGATCTCTTTTATTTTTGGGACACCATTTCTGGGCAAGAACCATTTGAGAAATCATTTAAGGCAAGAAACATCCAATTTCTAAGGCAATTTGTTTCAGCTCGTGGTGTTCGTGTTCTTCCCATTCCACAGTTTCTTCTTCCGGCCCAATATATACTACGGATTCATCACACATACAAGCGTCTCAAGTGGTGTGCTAACATAGAAACTAAAATAGGAAGATCGCTTAATGCTATATTGGATTTTCTTCCCTTTATCCTTGCTGCTCATCTATACGGAGCCTTGTGGTACCGTCTTTCTCTTCAACGAGAGGTAGATTGTTGGCGGCATGCCTGTCACGATAAAAGGGTGGGATGTGATCTCGCTCAAACAGCTTATGGTTTCTACTGTGGTGTCAACATTACCTCCTACAAATCGCGTCTCAATATCACGCATATAAAGGCATCATGCCCTATAAATCCACCAGATCCAACTATCTTCGATTTTGGTATATATCTCTACGCTCTTCAGTCTAACACGATCAGGTCAACGTCTATTCCACGAAACATCCTTCAATGTTTCTGGTGGGGATTGCGCAATCTGAGTTCTTTAGGTTCAAACCTCCAGACTAGTCTCTATTGGGGGGAAATCGTTTTTACGATTTTCGTATCTATAAGTGGCATGGTGCTATTTTTATTATATCTCAATAAAAGGATACAGGTCCCAATGCTGGAAAATATGAATGAAAACGTGTTGAAAGCAATCTGTGAGCATCTTAAGTTGGTGAGGTATAGCGAAGACAAGTATATTTTTCGAGAGGGTGAACCACTTGATAAGATGCTCTTCATCAGCCAAGGTACGGCATGGTCATACCCAACCAATGCAAGTGGTTCCTCAGCGATCAAGTGTCTTGTGAAAGGTGACTTCTACGGAGAAGAGCTTCTAAATTGGGCATCAAAATTGAGCTCTTTTTCTGAATTTCCCAAGTCAACCAGAGTTGTCAAGGCCCATACGAAAGTTGAAGCATTTGCCATCAGAGCCAACAACTTGAACATTGTTGTCTCCACATTTTGGTGGCATTTTAGCAAGAAGCTTGATCACATAGAGGACTCTCAGTTGGAGAAGTGGCAAAGTTTGGCAGCTTCTTCCATGCAAGCAAAATGGCGCCGCCGCATGCAAGGCAGAGCTATGGGCGTACCTGGGAAAAAAAACATTAGCCTAAAAAGTATCTTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
Ion_trans Pkinase_Tyr cNMP_binding

Protein Analysis

501

Amino Acids

57.65

Weight (kDa)

8.88

Isoelectric Point (pI)

52.99

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000017)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07351 FvH4_1g11800 FvH4_1g11800 FvH4_1g11800 FvH4_1g11800 FvH4_1g11800 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_4g14360 FvH4_6g13561 FvH4_6g13562 FvH4_6g13580 FvH4_6g13590 FvH4_6g13590 FvH4_6g13590 FvH4_6g13731 FvH4_6g13770 FvH4_6g13800 FvH4_6g13800 FvH4_6g13860 FvH4_6g13870 FvH4_6g13870 FvH4_6g13870 FvH4_6g13870 FvH4_6g13870 FvH4_6g13890 FvH4_6g33801 FvH4_7g13020 FvH4_7g13270 FvH4_7g13270 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g14580 FvH4_7g14580 FvH4_7g14580 FvH4_7g14600 FvH4_7g14600 FvH4_7g20030 FvH4_7g20510 FvH4_7g20510 FvH4_7g20510 FvH4_7g20670 FvH4_7g20670 FvH4_7g20670 FvH4_7g20670 FvH4_7g20690 FvH4_7g20690 FvH4_7g31930 FvH4_7g31930 FvH4_7g31940 FvH4_7g31940
malus_domestica MD01G1115700.v1.1 MD01G1115800.v1.1 MD01G1116600.v1.1 MD01G1116700.v1.1 MD01G1117000.v1.1 MD01G1225000.v1.1 MD02G1077900.v1.1 MD02G1078000.v1.1 MD02G1078200.v1.1 MD02G1078400.v1.1 MD02G1084300.v1.1 MD04G1004700.v1.1 MD04G1123100.v1.1 MD04G1123200.v1.1 MD04G1128000.v1.1 MD04G1128400.v1.1 MD05G1299700.v1.1 MD05G1300000.v1.1 MD07G1184000.v1.1 MD07G1292300.v1.1 MD08G1214800.v1.1
prunus_persica Prupe.1G205100_v2.0.a1 Prupe.1G205100_v2.0.a1 Prupe.1G205200_v2.0.a1 Prupe.2G222300_v2.0.a1 Prupe.2G223300_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223600_v2.0.a1 Prupe.2G223600_v2.0.a1 Prupe.2G223600_v2.0.a1 Prupe.2G223700_v2.0.a1 Prupe.2G223700_v2.0.a1 Prupe.2G223700_v2.0.a1 Prupe.2G223700_v2.0.a1 Prupe.2G223800_v2.0.a1 Prupe.2G223900_v2.0.a1 Prupe.2G224000_v2.0.a1 Prupe.5G162000_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G291000_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G210400_v2.0.a1 Prupe.7G210600_v2.0.a1 Prupe.7G210700_v2.0.a1 Prupe.7G210800_v2.0.a1 Prupe.7G210900_v2.0.a1 Prupe.8G097600_v2.0.a1 Prupe.8G097800_v2.0.a1 Prupe.8G097800_v2.0.a1
pyrus_communis pycom01g14430 pycom01g14440 pycom01g23130 pycom01g23160 pycom01g23330 pycom02g06210 pycom02g06220 pycom02g06250 pycom02g06270 pycom02g06710 pycom03g05360 pycom03g05380 pycom04g11470 pycom04g11480 pycom04g11520 pycom04g11560 pycom04g11600 pycom04g11610 pycom04g11650 pycom04g11660 pycom04g11670 pycom05g27790 pycom07g17630 pycom08g20960 pycom126g00020 pycom126g00030
rosa_chinensis RchiOBHm_Chr1g0318251 RchiOBHm_Chr1g0318731 RchiOBHm_Chr1g0339101 RchiOBHm_Chr1g0339111 RchiOBHm_Chr1g0347151 RchiOBHm_Chr1g0347161 RchiOBHm_Chr1g0347221 RchiOBHm_Chr1g0352401 RchiOBHm_Chr1g0352441 RchiOBHm_Chr1g0352461 RchiOBHm_Chr1g0356131 RchiOBHm_Chr1g0363991 RchiOBHm_Chr1g0364791 RchiOBHm_Chr1g0364801 RchiOBHm_Chr1g0364811 RchiOBHm_Chr1g0364851 RchiOBHm_Chr1g0364951 RchiOBHm_Chr1g0370821 RchiOBHm_Chr1g0381221 RchiOBHm_Chr1g0381231 RchiOBHm_Chr1g0381261 RchiOBHm_Chr1g0381271 RchiOBHm_Chr1g0381341 RchiOBHm_Chr1g0381351 RchiOBHm_Chr1g0381391 RchiOBHm_Chr1g0381801 RchiOBHm_Chr1g0381821 RchiOBHm_Chr2g0093241 RchiOBHm_Chr2g0116391 RchiOBHm_Chr3g0466441 RchiOBHm_Chr3g0466631 RchiOBHm_Chr3g0466651 RchiOBHm_Chr3g0496921 RchiOBHm_Chr4g0400441 RchiOBHm_Chr4g0400501 RchiOBHm_Chr4g0400511 RchiOBHm_Chr4g0400691 RchiOBHm_Chr4g0400701 RchiOBHm_Chr4g0404331 RchiOBHm_Chr5g0052101 RchiOBHm_Chr5g0052111 RchiOBHm_Chr5g0052171 RchiOBHm_Chr5g0052181 RchiOBHm_Chr6g0264161 RchiOBHm_Chr6g0265551 RchiOBHm_Chr7g0213571 RchiOBHm_Chr7g0213581
rosa_laevigata RLG00000002796 RLG00000003261 RLG00000007935 RLG00000007936 RLG00000009187 RLG00000014179 RLG00000016381 RLG00000018265 RLG00000024558 RLG00000024574 RLG00000026232 RLG00000026234 RLG00000026236 RLG00000026237 RLG00000027459 RLG00000027461 RLG00000027463 RLG00000027530 RLG00000028103 RLG00000028304 RLG00000028333 RLG00000029214 RLG00000029848 RLG00000029951 RLG00000030115 RLG00000030552 RLG00000033668 RLG00000034840 RLG00000034841 RLG00000034842 RLG00000035830
rosa_multiflora Rmu_sc0000654.1_g000004 Rmu_sc0000675.1_g000025 Rmu_sc0001075.1_g000002 Rmu_sc0001726.1_g000004 Rmu_sc0001772.1_g000061 Rmu_sc0001772.1_g000065 Rmu_sc0002067.1_g000002 Rmu_sc0002183.1_g000001 Rmu_sc0002183.1_g000006 Rmu_sc0002244.1_g000003 Rmu_sc0002313.1_g000004 Rmu_sc0002319.1_g000004 Rmu_sc0002539.1_g000085 Rmu_sc0002636.1_g000004 Rmu_sc0003229.1_g000007 Rmu_sc0003313.1_g000020 Rmu_sc0003546.1_g000007 Rmu_sc0003724.1_g000015 Rmu_sc0003936.1_g000029 Rmu_sc0004191.1_g000067 Rmu_sc0004525.1_g000012 Rmu_sc0005122.1_g000009 Rmu_sc0005255.1_g000040 Rmu_sc0005338.1_g000016 Rmu_sc0005584.1_g000008 Rmu_sc0006460.1_g000013 Rmu_sc0006872.1_g000011 Rmu_sc0006872.1_g000015 Rmu_sc0006872.1_g000016 Rmu_sc0006952.1_g000013 Rmu_sc0007342.1_g000005 Rmu_sc0007342.1_g000006 Rmu_sc0008418.1_g000003 Rmu_sc0008418.1_g000006 Rmu_sc0008636.1_g000007 Rmu_sc0008636.1_g000008 Rmu_sc0009205.1_g000014 Rmu_sc0009365.1_g000014 Rmu_sc0009917.1_g000002 Rmu_sc0019289.1_g000003 Rmu_ssc0000098.1_g000011 Rmu_ssc0000098.1_g000012 Rmu_ssc0000167.1_g000018 Rmu_ssc0000167.1_g000024 Rmu_ssc0000326.1_g000015
rosa_roxburghii Rroxscaffold_166G00440780 Rroxscaffold_176G00431500 Rroxscaffold_1G00015080 Rroxscaffold_1G00027880 Rroxscaffold_1G00027890 Rroxscaffold_1G00027920 Rroxscaffold_2G00127250 Rroxscaffold_2G00148380 Rroxscaffold_3G00219450 Rroxscaffold_3G00232170 Rroxscaffold_3G00232210 Rroxscaffold_3G00242230 Rroxscaffold_3G00242240 Rroxscaffold_3G00244790 Rroxscaffold_3G00245790 Rroxscaffold_4G00278400 Rroxscaffold_4G00278430 Rroxscaffold_4G00278670 Rroxscaffold_4G00278680 Rroxscaffold_4G00278690 Rroxscaffold_4G00278700 Rroxscaffold_4G00278720 Rroxscaffold_4G00291690 Rroxscaffold_4G00292070 Rroxscaffold_4G00292090 Rroxscaffold_4G00292770 Rroxscaffold_4G00302240 Rroxscaffold_4G00302860 Rroxscaffold_4G00311320 Rroxscaffold_4G00311330 Rroxscaffold_4G00320570 Rroxscaffold_4G00322050 Rroxscaffold_4G00329480 Rroxscaffold_4G00329730 Rroxscaffold_5G00345500 Rroxscaffold_5G00345510 Rroxscaffold_5G00360830 Rroxscaffold_5G00360840 Rroxscaffold_6G00393450 Rroxscaffold_6G00404030 Rroxscaffold_6G00414220 Rroxscaffold_6G00414230 Rroxscaffold_6G00414280 Rroxscaffold_6G00414290 Rroxscaffold_6G00414350 Rroxscaffold_6G00414470 Rroxscaffold_7G00202570 Rroxscaffold_7G00203460 Rroxscaffold_7G00203470
rosa_rugosa Rorug01G0020500 Rorug01G0020600 Rorug01G0020700 Rorug01G0143700.1 Rorug01G0225700 Rorug01G0228500 Rorug01G0228600 Rorug01G0228600 Rorug01G0228700 Rorug01G0228800 Rorug01G0228800 Rorug01G0229000 Rorug01G0229300 Rorug01G0229400 Rorug01G0229600 Rorug01G0229700 Rorug01G0232200 Rorug01G0232600 Rorug01G0232600 Rorug01G0311900 Rorug01G0311900 Rorug01G0318400 Rorug01G0318500 Rorug01G0318500 Rorug01G0318500 Rorug01G0427900 Rorug01G0427900 Rorug01G0428000 Rorug01G0428200 Rorug01G0428300 Rorug01G0428400 Rorug01G0431500 Rorug01G0431600 Rorug01G0431600 Rorug02G0033800 Rorug02G0206300 Rorug03G0081900 Rorug03G0083200 Rorug03G0083200 Rorug03G0083300 Rorug04G0025100 Rorug04G0025100 Rorug04G0025200 Rorug04G0025300 Rorug04G0058600 Rorug04G0058700 Rorug04G0058800 Rorug04G0098400 Rorug04G0098500 Rorug05G0274500 Rorug05G0274600 Rorug05G0274800 Rorug06G0008500 Rorug06G0009100 Rorug06G0018000
rosa_samantha Rh1AG031700 Rh1AG036100 Rh1AG089800 Rh1AG239800 Rh1AG239900 Rh1AG242000 Rh1AG242300 Rh1AG245600 Rh1AG262600 Rh1AG319700 Rh1AG319800 Rh1AG319900 Rh1AG327200 Rh1AG451100 Rh1AG451200 Rh1AG451300 Rh1AG451600 Rh1AG451700 Rh1BG027200 Rh1BG071600 Rh1BG090700 Rh1BG211000 Rh1BG213000 Rh1BG213500 Rh1BG282800 Rh1BG288400 Rh1BG408100 Rh1BG408200 Rh1BG408400 Rh1BG408700 Rh1CG026300 Rh1CG028300 Rh1CG224100 Rh1CG226000 Rh1CG226100 Rh1CG229300 Rh1CG229400 Rh1CG245900 Rh1CG299200 Rh1CG299400 Rh1CG299500 Rh1CG303300 Rh1CG305100 Rh1CG422500 Rh1CG422600 Rh1CG422700 Rh1CG422800 Rh1CG422900 Rh1CG423100 Rh1CG423300 Rh1CG423400 Rh1CG426300 Rh1CG426600 Rh1DG239300 Rh1DG239600 Rh1DG258300 Rh1DG314200 Rh1DG314300 Rh1DG314400 Rh1DG320000 Rh1DG439200 Rh1DG439400 Rh1DG439500 Rh1DG439700 Rh1DG440000 Rh1DG443800 Rh2AG261800 Rh2BG080900 Rh2CG083300 Rh2DG078900 Rh2DG270000 Rh2DG270100 Rh3AG128400 Rh3AG130100 Rh3AG130500 Rh3AG332500 Rh3AG332600 Rh3AG332800 Rh3BG149700 Rh3BG151500 Rh3CG151400 Rh3CG354500 Rh3CG366800 Rh3DG150500 Rh3DG152200 Rh4AG101400 Rh4AG102900 Rh4AG148300 Rh4AG148600 Rh4BG098000 Rh4CG111100 Rh4CG111300 Rh4CG155100 Rh4DG094800 Rh5AG213600 Rh5AG346900 Rh5AG347000 Rh5BG357500 Rh5BG357700 Rh5BG485400 Rh5CG383100 Rh5CG383200 Rh5CG383300 Rh5CG509900 Rh5DG373000 Rh5DG373200 Rh6BG054300 Rh6BG126300 Rh6CG125100 Rh6CG185300 Rh6DG177000 Rh7AG276100 Rh7AG276200 Rh7BG230500 Rh7BG270500 Rh7BG364000 Rh7CG250100 Rh7CG295200 Rh7CG295300 Rh7DG389700
rosa_wichuraiana Rw0G001190 Rw0G010680 Rw0G013360 Rw0G014310 Rw0G014890 Rw0G020310 Rw0G021350 Rw0G022510 Rw1G003360 Rw1G004330 Rw1G006930 Rw1G008310 Rw1G021090 Rw1G021150 Rw1G021210 Rw1G023200 Rw1G023210 Rw1G028340 Rw1G028350 Rw1G028990 Rw1G032510 Rw1G039370 Rw1G039400 Rw1G039410 Rw1G039420 Rw1G039430 Rw2G006700 Rw2G020550 Rw2G020580 Rw3G012130 Rw3G012300 Rw3G012310 Rw3G028220 Rw3G029230 Rw5G021600 Rw5G032790 Rw6G011240 Rw7G027670 Rw7G032780

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 863
Acc65I GGTACC 1 cut(s) 576
AccB1I GGYRCC 2 cut(s) 576, 1431
AccB7I CCANNNNNTGG 2 cut(s) 272, 1338
AccII CGCG 1 cut(s) 706
AciI CCGC 5 cut(s) 5, 285, 613, 1435, 1438
AclWI GGATC 3 cut(s) 185, 276, 749
AcoI YGGCCR 2 cut(s) 80, 263
AcsI RAATTY 1 cut(s) 1244
AcuI CTGAAG 1 cut(s) 779
AcyI GRCGYC 1 cut(s) 1432
AfaI GTAC 4 cut(s) 232, 578, 1126, 1464
AfiI CCNNNNNNNGG 7 cut(s) 145, 223, 272, 321, 997, 1126, 1338
AflII CTTAAG 1 cut(s) 1043
AflIII ACRYGT 1 cut(s) 1017
AgsI TTSAA 6 cut(s) 593, 842, 885, 1024, 1289, 1318
AhlI ACTAGT 1 cut(s) 896
AjnI CCWGG 1 cut(s) 1465
AluBI AGCT 8 cut(s) 53, 389, 662, 1207, 1233, 1360, 1409, 1454
AluI AGCT 8 cut(s) 53, 389, 662, 1207, 1233, 1360, 1409, 1454
Alw21I GWGCWC 1 cut(s) 1235
Alw26I GTCTC 4 cut(s) 476, 713, 905, 1333
AlwI GGATC 3 cut(s) 185, 276, 749
AoxI GGCC 4 cut(s) 80, 263, 432, 1272
ApeKI GCWGC 3 cut(s) 118, 551, 1406
ApoI RAATTY 1 cut(s) 1244
Asp700I GAANNNNTTC 1 cut(s) 1206
Asp718I GGTACC 1 cut(s) 576
AspLEI GCGC 3 cut(s) 61, 864, 1434
AspS9I GGNCC 6 cut(s) 104, 226, 247, 433, 988, 1273
AsuHPI GGTGA 3 cut(s) 1063, 1100, 1199
AvaII GGWCC 4 cut(s) 104, 226, 247, 988
BalI TGGCCA 2 cut(s) 82, 265
BanI GGYRCC 2 cut(s) 576, 1431
BanII GRGCYC 1 cut(s) 1235
BauI CACGAG 1 cut(s) 390
BbsI GAAGAC 2 cut(s) 175, 1071
Bbv12I GWGCWC 1 cut(s) 1235
BbvCI CCTCAGC 1 cut(s) 1162
BbvI GCAGC 3 cut(s) 130, 538, 1418
BccI CCATC 1 cut(s) 1307
BceAI ACGGC 1 cut(s) 1143
BciT130I CCWGG 1 cut(s) 1467
BciVI GTATCC 1 cut(s) 975
BclI TGATCA 2 cut(s) 40, 1363
BcoDI GTCTC 4 cut(s) 476, 713, 905, 1333
BcuI ACTAGT 1 cut(s) 896
BfaI CTAG 3 cut(s) 218, 290, 897
BfoI RGCGCY 1 cut(s) 1435
BfrI CTTAAG 1 cut(s) 1043
BfuI GTATCC 1 cut(s) 975
BglII AGATCT 1 cut(s) 292
BisI GCNGC 6 cut(s) 119, 552, 614, 1407, 1435, 1438
BlsI GCNGC 6 cut(s) 120, 553, 615, 1408, 1436, 1439
Bme1390I CCNGG 1 cut(s) 1467
Bme18I GGWCC 4 cut(s) 104, 226, 247, 988
BmgT120I GGNCC 6 cut(s) 104, 226, 247, 433, 988, 1273
BmiI GGNNCC 6 cut(s) 249, 568, 578, 990, 1159, 1433
BmrFI CCNGG 1 cut(s) 1467
BmsI GCATC 4 cut(s) 740, 1048, 1095, 1229
BpiI GAAGAC 2 cut(s) 175, 1071
BpmI CTGGAG 2 cut(s) 75, 875
Bpu10I CCTNAGC 1 cut(s) 1162
BpuEI CTTGAG 1 cut(s) 458
BsaAI YACGTR 1 cut(s) 234
BsaHI GRCGYC 1 cut(s) 1432
BsaJI CCNNGG 2 cut(s) 1120, 1466
BsaXI ACNNNNNCTCC 2 cut(s) 677, 707
Bsc4I CCNNNNNNNGG 7 cut(s) 145, 223, 272, 321, 997, 1126, 1338
BseBI CCWGG 1 cut(s) 1467
BseDI CCNNGG 2 cut(s) 1120, 1466
BseGI GGATG 3 cut(s) 360, 647, 834
BseLI CCNNNNNNNGG 7 cut(s) 145, 223, 272, 321, 997, 1126, 1338
BseMII CTCAG 3 cut(s) 860, 1176, 1394
BseRI GAGGAG 1 cut(s) 107
BseXI GCAGC 3 cut(s) 130, 538, 1418
Bsh1236I CGCG 1 cut(s) 706
BshFI GGCC 4 cut(s) 82, 265, 434, 1274
BshNI GGYRCC 2 cut(s) 576, 1431
BsiHKAI GWGCWC 1 cut(s) 1235
BsiSI CCGG 1 cut(s) 431
BsiWI CGTACG 1 cut(s) 230
BslFI GGGAC 2 cut(s) 323, 974
BslI CCNNNNNNNGG 7 cut(s) 145, 223, 272, 321, 997, 1126, 1338
BsmAI GTCTC 4 cut(s) 476, 713, 905, 1333
BsmBI CGTCTC 2 cut(s) 476, 713
BsmFI GGGAC 2 cut(s) 323, 974
BsnI GGCC 4 cut(s) 82, 265, 434, 1274
Bsp1286I GDGCHC 1 cut(s) 1235
BspACI CCGC 5 cut(s) 5, 285, 613, 1435, 1438
BspANI GGCC 4 cut(s) 82, 265, 434, 1274
BspCNI CTCAG 3 cut(s) 861, 1175, 1393
BspFNI CGCG 1 cut(s) 706
BspHI TCATGA 1 cut(s) 43
BspLI GGNNCC 6 cut(s) 249, 568, 578, 990, 1159, 1433
BspPI GGATC 3 cut(s) 185, 276, 749
BspQI GCTCTTC 3 cut(s) 798, 1115, 1197
BspT107I GGYRCC 2 cut(s) 576, 1431
BspTI CTTAAG 1 cut(s) 1043
BssECI CCNNGG 2 cut(s) 1120, 1466
BssNI GRCGYC 1 cut(s) 1432
BssSI CACGAG 1 cut(s) 390
BssT1I CCWWGG 1 cut(s) 1120
Bst2BI CACGAG 1 cut(s) 390
Bst2UI CCWGG 1 cut(s) 1467
Bst4CI ACNGT 5 cut(s) 214, 230, 420, 581, 677
Bst6I CTCTTC 4 cut(s) 594, 798, 1115, 1197
BstACI GRCGYC 1 cut(s) 1432
BstAFI CTTAAG 1 cut(s) 1043
BstBAI YACGTR 1 cut(s) 234
BstC8I GCNNGC 4 cut(s) 123, 618, 1422, 1442
BstDEI CTNAG 4 cut(s) 371, 869, 1162, 1380
BstENI CCTNNNNNAGG 1 cut(s) 221
BstF5I GGATG 3 cut(s) 360, 647, 834
BstFNI CGCG 1 cut(s) 706
BstH2I RGCGCY 1 cut(s) 1435
BstHHI GCGC 3 cut(s) 61, 864, 1434
BstMAI GTCTC 4 cut(s) 476, 713, 905, 1333
BstMWI GCNNNNNNNGC 3 cut(s) 659, 1304, 1446
BstNI CCWGG 1 cut(s) 1467
BstNSI RCATGY 2 cut(s) 620, 1444
BstSCI CCNGG 1 cut(s) 1465
BstUI CGCG 1 cut(s) 706
BstV1I GCAGC 3 cut(s) 130, 538, 1418
BstV2I GAAGAC 2 cut(s) 175, 1071
BstX2I RGATCY 2 cut(s) 292, 754
BstYI RGATCY 2 cut(s) 292, 754
BsuI GTATCC 1 cut(s) 975
BsuRI GGCC 4 cut(s) 82, 265, 434, 1274
BtsCI GGATG 3 cut(s) 360, 647, 834
Cac8I GCNNGC 4 cut(s) 123, 618, 1422, 1442
CciI TCATGA 1 cut(s) 43
CfoI GCGC 3 cut(s) 61, 864, 1434
Cfr13I GGNCC 6 cut(s) 104, 226, 247, 433, 988, 1273
CseI GACGC 2 cut(s) 458, 695
Csp6I GTAC 4 cut(s) 231, 577, 1125, 1463
CspCI CAANNNNNGTGG 2 cut(s) 1135, 1170
CviAII CATG 9 cut(s) 44, 110, 168, 617, 735, 949, 1131, 1417, 1441
CviQI GTAC 4 cut(s) 231, 577, 1125, 1463
DdeI CTNAG 4 cut(s) 371, 869, 1162, 1380
DinI GGCGCC 1 cut(s) 1433
EaeI YGGCCR 2 cut(s) 80, 263
Eam1104I CTCTTC 4 cut(s) 594, 798, 1115, 1197
EarI CTCTTC 4 cut(s) 594, 798, 1115, 1197
EciI GGCGGA 2 cut(s) 20, 274
Ecl136II GAGCTC 1 cut(s) 1233
Eco130I CCWWGG 1 cut(s) 1120
Eco24I GRGCYC 1 cut(s) 1235
Eco32I GATATC 1 cut(s) 165
Eco47I GGWCC 4 cut(s) 104, 226, 247, 988
Eco53kI GAGCTC 1 cut(s) 1233
Eco57I CTGAAG 1 cut(s) 779
EcoICRI GAGCTC 1 cut(s) 1233
EcoNI CCTNNNNNAGG 1 cut(s) 221
EcoO109I RGGNCCY 1 cut(s) 988
EcoRII CCWGG 1 cut(s) 1465
EcoRV GATATC 1 cut(s) 165
EcoT14I CCWWGG 1 cut(s) 1120
EcoT38I GRGCYC 1 cut(s) 1235
EgeI GGCGCC 1 cut(s) 1433
EheI GGCGCC 1 cut(s) 1433
ErhI CCWWGG 1 cut(s) 1120
Esp3I CGTCTC 2 cut(s) 476, 713
FaeI CATG 9 cut(s) 47, 113, 171, 620, 738, 952, 1134, 1420, 1444
FalI AAGNNNNNCTT 2 cut(s) 1094, 1126
FaqI GGGAC 2 cut(s) 323, 974
FatI CATG 9 cut(s) 43, 109, 167, 616, 734, 948, 1130, 1416, 1440
FbaI TGATCA 2 cut(s) 40, 1363
Fnu4HI GCNGC 6 cut(s) 119, 552, 614, 1407, 1435, 1438
FokI GGATG 3 cut(s) 347, 654, 821
FriOI GRGCYC 1 cut(s) 1235
Fsp4HI GCNGC 6 cut(s) 119, 552, 614, 1407, 1435, 1438
FspBI CTAG 3 cut(s) 218, 290, 897
FspI TGCGCA 1 cut(s) 863
GlaI GCGC 3 cut(s) 60, 863, 1433
GluI GCNGC 6 cut(s) 119, 552, 614, 1407, 1435, 1438
GsuI CTGGAG 2 cut(s) 75, 875
HaeII RGCGCY 1 cut(s) 1435
HaeIII GGCC 4 cut(s) 82, 265, 434, 1274
HapII CCGG 1 cut(s) 431
HgaI GACGC 2 cut(s) 458, 695
HhaI GCGC 3 cut(s) 61, 864, 1434
Hin1I GRCGYC 1 cut(s) 1432
Hin1II CATG 9 cut(s) 47, 113, 171, 620, 738, 952, 1134, 1420, 1444
Hin6I GCGC 3 cut(s) 59, 862, 1432
HinP1I GCGC 3 cut(s) 59, 862, 1432
HincII GTYRAC 3 cut(s) 685, 816, 1257
HindII GTYRAC 3 cut(s) 685, 816, 1257
HindIII AAGCTT 1 cut(s) 1358
HinfI GANTC 5 cut(s) 8, 20, 97, 451, 1376
HpaII CCGG 1 cut(s) 431
HphI GGTGA 3 cut(s) 1063, 1100, 1199
Hpy166II GTNNAC 6 cut(s) 74, 107, 685, 816, 1091, 1257
Hpy188I TCNGA 4 cut(s) 140, 870, 1243, 1304
Hpy188III TCNNGA 4 cut(s) 44, 626, 892, 1082
Hpy8I GTNNAC 6 cut(s) 74, 107, 685, 816, 1091, 1257
HpyAV CCTTC 1 cut(s) 848
HpyCH4III ACNGT 5 cut(s) 214, 230, 420, 581, 677
HpyCH4IV ACGT 3 cut(s) 233, 818, 1017
HpyCH4V TGCA 3 cut(s) 1151, 1420, 1444
HpyF10VI GCNNNNNNNGC 3 cut(s) 659, 1304, 1446
HpyF3I CTNAG 4 cut(s) 371, 869, 1162, 1380
HpySE526I ACGT 3 cut(s) 233, 818, 1017
Hsp92I GRCGYC 1 cut(s) 1432
Hsp92II CATG 9 cut(s) 47, 113, 171, 620, 738, 952, 1134, 1420, 1444
HspAI GCGC 3 cut(s) 59, 862, 1432
KasI GGCGCC 1 cut(s) 1431
KpnI GGTACC 1 cut(s) 580
Ksp22I TGATCA 2 cut(s) 40, 1363
LguI GCTCTTC 3 cut(s) 798, 1115, 1197
LmnI GCTCC 2 cut(s) 56, 566
Lsp1109I GCAGC 3 cut(s) 130, 538, 1418
LweI GCATC 4 cut(s) 740, 1048, 1095, 1229
MaeI CTAG 3 cut(s) 218, 290, 897
MaeII ACGT 3 cut(s) 233, 818, 1017
MaeIII GTNAC 2 cut(s) 623, 1187
MflI RGATCY 2 cut(s) 292, 754
MhlI GDGCHC 1 cut(s) 1235
MlsI TGGCCA 2 cut(s) 82, 265
MluCI AATT 5 cut(s) 365, 377, 1213, 1226, 1244
MluNI TGGCCA 2 cut(s) 82, 265
Mly113I GGCGCC 1 cut(s) 1432
MlyI GAGTC 3 cut(s) 2, 14, 1370
MmeI TCCRAC 2 cut(s) 782, 1365
Mox20I TGGCCA 2 cut(s) 82, 265
MroXI GAANNNNTTC 1 cut(s) 1206
MscI TGGCCA 2 cut(s) 82, 265
MseI TTAA 3 cut(s) 348, 516, 1044
MslI CAYNNNNRTG 1 cut(s) 1339
Msp20I TGGCCA 2 cut(s) 82, 265
MspCI CTTAAG 1 cut(s) 1043
MspI CCGG 1 cut(s) 431
MspR9I CCNGG 1 cut(s) 1467
MvaI CCWGG 1 cut(s) 1467
MvnI CGCG 1 cut(s) 706
MwoI GCNNNNNNNGC 3 cut(s) 659, 1304, 1446
NarI GGCGCC 1 cut(s) 1432
NlaIII CATG 9 cut(s) 47, 113, 171, 620, 738, 952, 1134, 1420, 1444
NlaIV GGNNCC 6 cut(s) 249, 568, 578, 990, 1159, 1433
NmuCI GTSAC 2 cut(s) 623, 1187
NsbI TGCGCA 1 cut(s) 863
NspI RCATGY 2 cut(s) 620, 1444
PaeI GCATGC 2 cut(s) 620, 1444
PagI TCATGA 1 cut(s) 43
PciSI GCTCTTC 3 cut(s) 798, 1115, 1197
PcsI WCGNNNNNNNCGW 1 cut(s) 397
PdmI GAANNNNTTC 1 cut(s) 1206
PfeI GAWTC 2 cut(s) 97, 451
Pfl23II CGTACG 1 cut(s) 230
PflMI CCANNNNNTGG 2 cut(s) 272, 1338
PkrI GCNGC 6 cut(s) 120, 553, 615, 1408, 1436, 1439
PleI GAGTC 3 cut(s) 2, 14, 1370
PluTI GGCGCC 1 cut(s) 1435
PpsI GAGTC 3 cut(s) 2, 14, 1370
Ppu21I YACGTR 1 cut(s) 234
PpuMI RGGWCCY 1 cut(s) 988
Psp124BI GAGCTC 1 cut(s) 1235
Psp5II RGGWCCY 1 cut(s) 988
Psp6I CCWGG 1 cut(s) 1465
PspGI CCWGG 1 cut(s) 1465
PspLI CGTACG 1 cut(s) 230
PspN4I GGNNCC 6 cut(s) 249, 568, 578, 990, 1159, 1433
PspPI GGNCC 6 cut(s) 104, 226, 247, 433, 988, 1273
PspPPI RGGWCCY 1 cut(s) 988
PsuI RGATCY 2 cut(s) 292, 754
RsaI GTAC 4 cut(s) 232, 578, 1126, 1464
RsaNI GTAC 4 cut(s) 231, 577, 1125, 1463
RseI CAYNNNNRTG 1 cut(s) 1339
SacI GAGCTC 1 cut(s) 1235
SapI GCTCTTC 3 cut(s) 798, 1115, 1197
SaqAI TTAA 3 cut(s) 348, 516, 1044
SatI GCNGC 6 cut(s) 119, 552, 614, 1407, 1435, 1438
Sau96I GGNCC 6 cut(s) 104, 226, 247, 433, 988, 1273
SchI GAGTC 3 cut(s) 2, 14, 1370
ScrFI CCNGG 1 cut(s) 1467
SduI GDGCHC 1 cut(s) 1235
SfaNI GCATC 4 cut(s) 740, 1048, 1095, 1229
SfoI GGCGCC 1 cut(s) 1433
SinI GGWCC 4 cut(s) 104, 226, 247, 988
SmiMI CAYNNNNRTG 1 cut(s) 1339
SmlI CTYRAG 2 cut(s) 473, 1043
SmoI CTYRAG 2 cut(s) 473, 1043
SpeI ACTAGT 1 cut(s) 896
SphI GCATGC 2 cut(s) 620, 1444
Sse9I AATT 5 cut(s) 365, 377, 1213, 1226, 1244
SsiI CCGC 5 cut(s) 5, 285, 613, 1435, 1438
SspDI GGCGCC 1 cut(s) 1431
SspMI CTAG 3 cut(s) 218, 290, 897
SstI GAGCTC 1 cut(s) 1235
StyD4I CCNGG 1 cut(s) 1465
StyI CCWWGG 1 cut(s) 1120
TaaI ACNGT 5 cut(s) 214, 230, 420, 581, 677
TaiI ACGT 3 cut(s) 236, 821, 1020
TaqI TCGA 2 cut(s) 768, 1081
TasI AATT 5 cut(s) 365, 377, 1213, 1226, 1244
TauI GCSGC 3 cut(s) 616, 1437, 1440
TfiI GAWTC 2 cut(s) 97, 451
Tru1I TTAA 3 cut(s) 348, 516, 1044
Tru9I TTAA 3 cut(s) 348, 516, 1044
TseFI GTSAC 2 cut(s) 623, 1187
TseI GCWGC 3 cut(s) 118, 551, 1406
Tsp45I GTSAC 2 cut(s) 623, 1187
TspDTI ATGAA 5 cut(s) 63, 443, 1022, 1026, 1102
TspGWI ACGGA 3 cut(s) 463, 579, 1212
Van91I CCANNNNNTGG 2 cut(s) 272, 1338
Vha464I CTTAAG 1 cut(s) 1043
VpaK11BI GGWCC 4 cut(s) 104, 226, 247, 988
XagI CCTNNNNNAGG 1 cut(s) 221
XapI RAATTY 1 cut(s) 1244
XceI RCATGY 2 cut(s) 620, 1444
XcmI CCANNNNNNNNNTGG 1 cut(s) 258
XmnI GAANNNNTTC 1 cut(s) 1206
XspI CTAG 3 cut(s) 218, 290, 897
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.