Prupe.2G223700_v2.0.a1

Cyclic nucleotide-gated ion channel 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
OG0000017
Physical Location & Seq
Forward (+)
25094930 .. 25100619
5690 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G223700.4

Sequence Viewer

Length: 2910 bp
ATGGCTAACGGTGAAGTAGCTATAGCTTTGGAGAAGATGGAAGAGAAAGCTGAAGCAACTCCAGTTGCAGACAACTCGAAAGAGAAAGTTGCAAGTAGTCATTCAAAACCAGAGGCTACAGCGGAAAATTCAGTCATGAAAGATGAACACGGATCAAGTAAGAAATGGTCACCAAAAGAGGAGGAAGCTCATGATCCTCCTCAGGGGTGCTTCCTTCAAAAGTGGAAGAAGATATTTGTAGCGTCATGTCTGTTTGCTGTTTTATTGGATCCATTGTTTCTCTACGTTCCTATGATGAGGGACGAAATCAAGTGCCTGCTGTACGATAGAAACTTGAAGATTGCCGCTCTTCTTTTAAGATCAGTCACTGATCTTTTCTATATATTGGACATTATTTTTCAAATTTATGCATCACCCAACTATTCTGATGTCATGGATCTATATCGTCGTATTAGGCTTTACTGCTCGAAAATAAGATTTTGGAGGAAATATTTTGTGCCAACAATTGCTAAGACAATCTTGGGGTCATACAATATCTTAATTGACATTATGGCCATTCTTCCGCTTCCACAGGTAGCAATCTTCATCTTCTTTTCAAAAATGAGGGACTTGAGATCTTTGAGCACAAAAAGGATGGCTATCATGAACTTTTTTGTTTTGTTGCAATATGTGCCACGAGTTCTTTGTATCTACTTATCATGTAAGGAACTTAAAAGGACTCCTAAAGGAGGGACCGGAGAGACTGCCATATGGGTTAAAGGTGTCTTGAATTTCTTTATGTATATCCTCGCTAGTCATGTACTTGGAGCCATATGGTATTTTTTCGCTATCCAACGAATTGCCATTTGTTGGCATGATGCATGTCGAAAAGAAAATGGATGTGACACTAGTACTTTTGGTTGTCATGAGCATCAGACATTTAGAAATATAAGATTTCTAAATGATTTATGCCCTATAAGTCCAGTGAATACAACGCGTTTTGATTTTGGTATATATAGTACAATCCTTCAATCTGGTATACCGGGTTCAACAAATTATTTTGAAAAGTTCTCCAATTGTTTTTGGTGGGGCCTGCGAAATTTGAGTTCTCTTGGTTCAAACCTGGAGCCTAGTATCGATGGATGGGAAAACCTGTTTGCGGCTTTTATATCTATAATTGGCTTGCTTTTATTCTTATATCTCATTGGGAATTTGCAGACATACATGCAGTTGAATACTGCACGAAGAGAAGACCATAGACACAAGATGAAAGTGGAACGAAAGATGGAAAAGAAAGATCCAGAGACAGAGTTGTGGTTATCTAAAAATGGCGTCCCCAAAAGGTTGATTAATGATATCAAGTCGCAGATGATGGTGAAGGTGCGACAAGAAGTTGAAGTAGACAGGGATGCTGATTTGGACTATATCTTCTCTATTCTTCCCTCGACTCTTCAAATGCGTATTAAACAGTATATGCCTATGACTAGGTTAAAGCAGGTGCCAATGTTTCAAAACATGGATGAAAGTGTGTTGAAAGAAATCTGTCGGCGTCTTAAGCCCAAGAAGTTTACTGAAGGTGATATCATTATTGAAGAGGGTAAACGACTTAAAAAGATGGTCTACATTGTGGAAGGACTTGTAAGCATTAGAAGCAAAGATAGCTCCAGTGATTTGCAGCAACGAGGTCCAGGACAAGTATGTGGAGAAAAACTTGTACGGAGGCTACCGTCAACCTCATTTCCCCGCAAAGCACCGGAAACCAAGTCTGCTATCACAATAGGTGATGTTGAAGCCCTTGTTCTCAAGGCTAGTGACGTGCAGGATATGGTCTTTGAATTCGGAAAGCAATACTTTTTGGGGACAAAAATATTTAGTGCAAAACAACTTGAGGAGGCAACAAACAATTACCATAATATCATTGGTCAAGGAATCTCTGCAACCGTTTACGAAGGAAATCTACCAGATGGCACAAGGGTTGCGGTAAAGAAGTCCAAAACTACTAGACCTATCAGTTATAGTCCACGTGTAATTAAAGAGGTTGGGGTTGCTTCTCAGATAGACCACAAAAATGTGGTGAGGTTCTTAGGCTGTTGTTTGGAACCACAGACACAAGCACTGGTTTTTGAGTACATTCCCAAAGGCACTCTTTCCCAACACACTCATAAAGAAGAAGAGGGCAGAGGATCATCATCACCACTTTCATGGGAGTTACGGATAAAGATAGCGTCAGAGACCGCAGAAGCACTGGCTTACTTGCACTCATTCACTCCCAATAAGCCAATCATACACGGACATGTGAACACAAAAAATATACTATTGGATGATGATTTCACGGCGAAGTTGTCTGGCTTTGGAGTTTCACGATTGTTCATTGATGATGACGATGACGATGATGATGAAGATGAAGCTGTGGCAGCTTATGTGCGAGAGAAATTACGGTACTTGGACCTTGAGTATAATCAACCGCAGGCGCTAAGAGAAAAGAGTGACGTCTATAACTTTGGAGTTGTCTTAGCGGAGCTACTAACCAGTCAAGTGTTCGAAAATGATAATGAAAGGAAATATTGCGGCACTCAACTGGACGCCAATGCGGGTCTAAAAGAATGGAACGCTGTTTCGCTCTGCTGGATGTATCGTCGGAACCCGTACAACATGCGAGATTTTTCTCCTGAGAGGGTTATGGAAAAGAGAGACCTGGCCTGGTTTCTATCCTCATTGGAAAAGGGTCACTTGGATCAAATTCTGGATGGTGAAATAATAGTCAATGAAGCAACTTCATCTGACACGGCCAAGCAAGTGGCGGATCTGGCAAAAAGATGTTTAAGGCCAAAAGGGGGTGAAAGGCCTTCCATGAAAGAAGTAGCCGCAGAGCTTCAGAGATTGCTCAAGTTTATGGCAGAGAATCAAAGGGGAGAACCCAGTTTCTGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
Ion_trans Pkinase Pkinase_Tyr cNMP_binding

Protein Analysis

970

Amino Acids

110.95

Weight (kDa)

8.36

Isoelectric Point (pI)

43.69

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000017)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07351 FvH4_1g11800 FvH4_1g11800 FvH4_1g11800 FvH4_1g11800 FvH4_1g11800 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_4g14360 FvH4_6g13561 FvH4_6g13562 FvH4_6g13580 FvH4_6g13590 FvH4_6g13590 FvH4_6g13590 FvH4_6g13731 FvH4_6g13770 FvH4_6g13800 FvH4_6g13800 FvH4_6g13860 FvH4_6g13870 FvH4_6g13870 FvH4_6g13870 FvH4_6g13870 FvH4_6g13870 FvH4_6g13890 FvH4_6g33801 FvH4_7g13020 FvH4_7g13270 FvH4_7g13270 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g14580 FvH4_7g14580 FvH4_7g14580 FvH4_7g14600 FvH4_7g14600 FvH4_7g20030 FvH4_7g20510 FvH4_7g20510 FvH4_7g20510 FvH4_7g20670 FvH4_7g20670 FvH4_7g20670 FvH4_7g20670 FvH4_7g20690 FvH4_7g20690 FvH4_7g31930 FvH4_7g31930 FvH4_7g31940 FvH4_7g31940
malus_domestica MD01G1115700.v1.1 MD01G1115800.v1.1 MD01G1116600.v1.1 MD01G1116700.v1.1 MD01G1117000.v1.1 MD01G1225000.v1.1 MD02G1077900.v1.1 MD02G1078000.v1.1 MD02G1078200.v1.1 MD02G1078400.v1.1 MD02G1084300.v1.1 MD04G1004700.v1.1 MD04G1123100.v1.1 MD04G1123200.v1.1 MD04G1128000.v1.1 MD04G1128400.v1.1 MD05G1299700.v1.1 MD05G1300000.v1.1 MD07G1184000.v1.1 MD07G1292300.v1.1 MD08G1214800.v1.1
prunus_persica Prupe.1G205100_v2.0.a1 Prupe.1G205100_v2.0.a1 Prupe.1G205200_v2.0.a1 Prupe.2G222300_v2.0.a1 Prupe.2G223300_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223600_v2.0.a1 Prupe.2G223600_v2.0.a1 Prupe.2G223600_v2.0.a1 Prupe.2G223700_v2.0.a1 Prupe.2G223700_v2.0.a1 Prupe.2G223700_v2.0.a1 Prupe.2G223700_v2.0.a1 Prupe.2G223800_v2.0.a1 Prupe.2G223900_v2.0.a1 Prupe.2G224000_v2.0.a1 Prupe.5G162000_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G291000_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G210400_v2.0.a1 Prupe.7G210600_v2.0.a1 Prupe.7G210700_v2.0.a1 Prupe.7G210800_v2.0.a1 Prupe.7G210900_v2.0.a1 Prupe.8G097600_v2.0.a1 Prupe.8G097800_v2.0.a1 Prupe.8G097800_v2.0.a1
pyrus_communis pycom01g14430 pycom01g14440 pycom01g23130 pycom01g23160 pycom01g23330 pycom02g06210 pycom02g06220 pycom02g06250 pycom02g06270 pycom02g06710 pycom03g05360 pycom03g05380 pycom04g11470 pycom04g11480 pycom04g11520 pycom04g11560 pycom04g11600 pycom04g11610 pycom04g11650 pycom04g11660 pycom04g11670 pycom05g27790 pycom07g17630 pycom08g20960 pycom126g00020 pycom126g00030
rosa_chinensis RchiOBHm_Chr1g0318251 RchiOBHm_Chr1g0318731 RchiOBHm_Chr1g0339101 RchiOBHm_Chr1g0339111 RchiOBHm_Chr1g0347151 RchiOBHm_Chr1g0347161 RchiOBHm_Chr1g0347221 RchiOBHm_Chr1g0352401 RchiOBHm_Chr1g0352441 RchiOBHm_Chr1g0352461 RchiOBHm_Chr1g0356131 RchiOBHm_Chr1g0363991 RchiOBHm_Chr1g0364791 RchiOBHm_Chr1g0364801 RchiOBHm_Chr1g0364811 RchiOBHm_Chr1g0364851 RchiOBHm_Chr1g0364951 RchiOBHm_Chr1g0370821 RchiOBHm_Chr1g0381221 RchiOBHm_Chr1g0381231 RchiOBHm_Chr1g0381261 RchiOBHm_Chr1g0381271 RchiOBHm_Chr1g0381341 RchiOBHm_Chr1g0381351 RchiOBHm_Chr1g0381391 RchiOBHm_Chr1g0381801 RchiOBHm_Chr1g0381821 RchiOBHm_Chr2g0093241 RchiOBHm_Chr2g0116391 RchiOBHm_Chr3g0466441 RchiOBHm_Chr3g0466631 RchiOBHm_Chr3g0466651 RchiOBHm_Chr3g0496921 RchiOBHm_Chr4g0400441 RchiOBHm_Chr4g0400501 RchiOBHm_Chr4g0400511 RchiOBHm_Chr4g0400691 RchiOBHm_Chr4g0400701 RchiOBHm_Chr4g0404331 RchiOBHm_Chr5g0052101 RchiOBHm_Chr5g0052111 RchiOBHm_Chr5g0052171 RchiOBHm_Chr5g0052181 RchiOBHm_Chr6g0264161 RchiOBHm_Chr6g0265551 RchiOBHm_Chr7g0213571 RchiOBHm_Chr7g0213581
rosa_laevigata RLG00000002796 RLG00000003261 RLG00000007935 RLG00000007936 RLG00000009187 RLG00000014179 RLG00000016381 RLG00000018265 RLG00000024558 RLG00000024574 RLG00000026232 RLG00000026234 RLG00000026236 RLG00000026237 RLG00000027459 RLG00000027461 RLG00000027463 RLG00000027530 RLG00000028103 RLG00000028304 RLG00000028333 RLG00000029214 RLG00000029848 RLG00000029951 RLG00000030115 RLG00000030552 RLG00000033668 RLG00000034840 RLG00000034841 RLG00000034842 RLG00000035830
rosa_multiflora Rmu_sc0000654.1_g000004 Rmu_sc0000675.1_g000025 Rmu_sc0001075.1_g000002 Rmu_sc0001726.1_g000004 Rmu_sc0001772.1_g000061 Rmu_sc0001772.1_g000065 Rmu_sc0002067.1_g000002 Rmu_sc0002183.1_g000001 Rmu_sc0002183.1_g000006 Rmu_sc0002244.1_g000003 Rmu_sc0002313.1_g000004 Rmu_sc0002319.1_g000004 Rmu_sc0002539.1_g000085 Rmu_sc0002636.1_g000004 Rmu_sc0003229.1_g000007 Rmu_sc0003313.1_g000020 Rmu_sc0003546.1_g000007 Rmu_sc0003724.1_g000015 Rmu_sc0003936.1_g000029 Rmu_sc0004191.1_g000067 Rmu_sc0004525.1_g000012 Rmu_sc0005122.1_g000009 Rmu_sc0005255.1_g000040 Rmu_sc0005338.1_g000016 Rmu_sc0005584.1_g000008 Rmu_sc0006460.1_g000013 Rmu_sc0006872.1_g000011 Rmu_sc0006872.1_g000015 Rmu_sc0006872.1_g000016 Rmu_sc0006952.1_g000013 Rmu_sc0007342.1_g000005 Rmu_sc0007342.1_g000006 Rmu_sc0008418.1_g000003 Rmu_sc0008418.1_g000006 Rmu_sc0008636.1_g000007 Rmu_sc0008636.1_g000008 Rmu_sc0009205.1_g000014 Rmu_sc0009365.1_g000014 Rmu_sc0009917.1_g000002 Rmu_sc0019289.1_g000003 Rmu_ssc0000098.1_g000011 Rmu_ssc0000098.1_g000012 Rmu_ssc0000167.1_g000018 Rmu_ssc0000167.1_g000024 Rmu_ssc0000326.1_g000015
rosa_roxburghii Rroxscaffold_166G00440780 Rroxscaffold_176G00431500 Rroxscaffold_1G00015080 Rroxscaffold_1G00027880 Rroxscaffold_1G00027890 Rroxscaffold_1G00027920 Rroxscaffold_2G00127250 Rroxscaffold_2G00148380 Rroxscaffold_3G00219450 Rroxscaffold_3G00232170 Rroxscaffold_3G00232210 Rroxscaffold_3G00242230 Rroxscaffold_3G00242240 Rroxscaffold_3G00244790 Rroxscaffold_3G00245790 Rroxscaffold_4G00278400 Rroxscaffold_4G00278430 Rroxscaffold_4G00278670 Rroxscaffold_4G00278680 Rroxscaffold_4G00278690 Rroxscaffold_4G00278700 Rroxscaffold_4G00278720 Rroxscaffold_4G00291690 Rroxscaffold_4G00292070 Rroxscaffold_4G00292090 Rroxscaffold_4G00292770 Rroxscaffold_4G00302240 Rroxscaffold_4G00302860 Rroxscaffold_4G00311320 Rroxscaffold_4G00311330 Rroxscaffold_4G00320570 Rroxscaffold_4G00322050 Rroxscaffold_4G00329480 Rroxscaffold_4G00329730 Rroxscaffold_5G00345500 Rroxscaffold_5G00345510 Rroxscaffold_5G00360830 Rroxscaffold_5G00360840 Rroxscaffold_6G00393450 Rroxscaffold_6G00404030 Rroxscaffold_6G00414220 Rroxscaffold_6G00414230 Rroxscaffold_6G00414280 Rroxscaffold_6G00414290 Rroxscaffold_6G00414350 Rroxscaffold_6G00414470 Rroxscaffold_7G00202570 Rroxscaffold_7G00203460 Rroxscaffold_7G00203470
rosa_rugosa Rorug01G0020500 Rorug01G0020600 Rorug01G0020700 Rorug01G0143700.1 Rorug01G0225700 Rorug01G0228500 Rorug01G0228600 Rorug01G0228600 Rorug01G0228700 Rorug01G0228800 Rorug01G0228800 Rorug01G0229000 Rorug01G0229300 Rorug01G0229400 Rorug01G0229600 Rorug01G0229700 Rorug01G0232200 Rorug01G0232600 Rorug01G0232600 Rorug01G0311900 Rorug01G0311900 Rorug01G0318400 Rorug01G0318500 Rorug01G0318500 Rorug01G0318500 Rorug01G0427900 Rorug01G0427900 Rorug01G0428000 Rorug01G0428200 Rorug01G0428300 Rorug01G0428400 Rorug01G0431500 Rorug01G0431600 Rorug01G0431600 Rorug02G0033800 Rorug02G0206300 Rorug03G0081900 Rorug03G0083200 Rorug03G0083200 Rorug03G0083300 Rorug04G0025100 Rorug04G0025100 Rorug04G0025200 Rorug04G0025300 Rorug04G0058600 Rorug04G0058700 Rorug04G0058800 Rorug04G0098400 Rorug04G0098500 Rorug05G0274500 Rorug05G0274600 Rorug05G0274800 Rorug06G0008500 Rorug06G0009100 Rorug06G0018000
rosa_samantha Rh1AG031700 Rh1AG036100 Rh1AG089800 Rh1AG239800 Rh1AG239900 Rh1AG242000 Rh1AG242300 Rh1AG245600 Rh1AG262600 Rh1AG319700 Rh1AG319800 Rh1AG319900 Rh1AG327200 Rh1AG451100 Rh1AG451200 Rh1AG451300 Rh1AG451600 Rh1AG451700 Rh1BG027200 Rh1BG071600 Rh1BG090700 Rh1BG211000 Rh1BG213000 Rh1BG213500 Rh1BG282800 Rh1BG288400 Rh1BG408100 Rh1BG408200 Rh1BG408400 Rh1BG408700 Rh1CG026300 Rh1CG028300 Rh1CG224100 Rh1CG226000 Rh1CG226100 Rh1CG229300 Rh1CG229400 Rh1CG245900 Rh1CG299200 Rh1CG299400 Rh1CG299500 Rh1CG303300 Rh1CG305100 Rh1CG422500 Rh1CG422600 Rh1CG422700 Rh1CG422800 Rh1CG422900 Rh1CG423100 Rh1CG423300 Rh1CG423400 Rh1CG426300 Rh1CG426600 Rh1DG239300 Rh1DG239600 Rh1DG258300 Rh1DG314200 Rh1DG314300 Rh1DG314400 Rh1DG320000 Rh1DG439200 Rh1DG439400 Rh1DG439500 Rh1DG439700 Rh1DG440000 Rh1DG443800 Rh2AG261800 Rh2BG080900 Rh2CG083300 Rh2DG078900 Rh2DG270000 Rh2DG270100 Rh3AG128400 Rh3AG130100 Rh3AG130500 Rh3AG332500 Rh3AG332600 Rh3AG332800 Rh3BG149700 Rh3BG151500 Rh3CG151400 Rh3CG354500 Rh3CG366800 Rh3DG150500 Rh3DG152200 Rh4AG101400 Rh4AG102900 Rh4AG148300 Rh4AG148600 Rh4BG098000 Rh4CG111100 Rh4CG111300 Rh4CG155100 Rh4DG094800 Rh5AG213600 Rh5AG346900 Rh5AG347000 Rh5BG357500 Rh5BG357700 Rh5BG485400 Rh5CG383100 Rh5CG383200 Rh5CG383300 Rh5CG509900 Rh5DG373000 Rh5DG373200 Rh6BG054300 Rh6BG126300 Rh6CG125100 Rh6CG185300 Rh6DG177000 Rh7AG276100 Rh7AG276200 Rh7BG230500 Rh7BG270500 Rh7BG364000 Rh7CG250100 Rh7CG295200 Rh7CG295300 Rh7DG389700
rosa_wichuraiana Rw0G001190 Rw0G010680 Rw0G013360 Rw0G014310 Rw0G014890 Rw0G020310 Rw0G021350 Rw0G022510 Rw1G003360 Rw1G004330 Rw1G006930 Rw1G008310 Rw1G021090 Rw1G021150 Rw1G021210 Rw1G023200 Rw1G023210 Rw1G028340 Rw1G028350 Rw1G028990 Rw1G032510 Rw1G039370 Rw1G039400 Rw1G039410 Rw1G039420 Rw1G039430 Rw2G006700 Rw2G020550 Rw2G020580 Rw3G012130 Rw3G012300 Rw3G012310 Rw3G028220 Rw3G029230 Rw5G021600 Rw5G032790 Rw6G011240 Rw7G027670 Rw7G032780

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1465
AatII GACGTC 1 cut(s) 2472
Acc36I ACCTGC 1 cut(s) 1465
AccB1I GGYRCC 1 cut(s) 1477
AccB7I CCANNNNNTGG 1 cut(s) 849
AccBSI CCGCTC 1 cut(s) 347
AccI GTMKAC 3 cut(s) 1018, 1380, 1599
AccII CGCG 1 cut(s) 976
AclWI GGATC 9 cut(s) 160, 188, 263, 276, 444, 1271, 2170, 2721, 2790
AcoI YGGCCR 2 cut(s) 552, 2766
AcsI RAATTY 7 cut(s) 127, 402, 769, 1078, 1189, 1814, 2718
AcuI CTGAAG 3 cut(s) 72, 1572, 2837
AcvI CACGTG 1 cut(s) 2003
AcyI GRCGYC 4 cut(s) 1311, 1528, 2469, 2562
AfaI GTAC 8 cut(s) 323, 801, 892, 1000, 1695, 2108, 2420, 2627
AfiI CCNNNNNNNGG 5 cut(s) 203, 728, 849, 1138, 2813
AflII CTTAAG 1 cut(s) 1532
AflIII ACRYGT 3 cut(s) 974, 2002, 2272
AhlI ACTAGT 1 cut(s) 887
AjiI CACGTC 1 cut(s) 1795
AjnI CCWGG 4 cut(s) 1101, 1666, 2673, 2678
AluBI AGCT 9 cut(s) 20, 26, 50, 188, 1641, 2387, 2396, 2500, 2851
AluI AGCT 9 cut(s) 20, 26, 50, 188, 1641, 2387, 2396, 2500, 2851
Alw21I GWGCWC 1 cut(s) 626
Alw26I GTCTC 4 cut(s) 734, 1277, 2204, 2664
AlwI GGATC 9 cut(s) 160, 188, 263, 276, 444, 1271, 2170, 2721, 2790
AlwNI CAGNNNCTG 2 cut(s) 368, 2904
AoxI GGCC 6 cut(s) 552, 1069, 2676, 2766, 2804, 2822
ApeKI GCWGC 2 cut(s) 1654, 2393
ApoI RAATTY 7 cut(s) 127, 402, 769, 1078, 1189, 1814, 2718
AseI ATTAAT 1 cut(s) 1329
AspLEI GCGC 1 cut(s) 2452
AspS9I GGNCC 4 cut(s) 732, 1069, 1664, 2425
AsuC2I CCSGG 1 cut(s) 1023
AsuII TTCGAA 1 cut(s) 2520
AvaII GGWCC 3 cut(s) 732, 1664, 2425
AxyI CCTNAGG 1 cut(s) 201
BalI TGGCCA 1 cut(s) 554
BamHI GGATCC 1 cut(s) 268
BanI GGYRCC 1 cut(s) 1477
BarI GAAGNNNNNNTAC 2 cut(s) 1920, 1952
BauI CACGAG 1 cut(s) 675
BbrPI CACGTG 1 cut(s) 2003
BbsI GAAGAC 1 cut(s) 1236
Bbv12I GWGCWC 1 cut(s) 626
BbvI GCAGC 2 cut(s) 1666, 2405
BccI CCATC 9 cut(s) 31, 628, 1112, 1116, 1258, 1345, 1588, 1937, 2720
BceAI ACGGC 2 cut(s) 2328, 2781
BcgI CGANNNNNNTGC 2 cut(s) 57, 91
BciT130I CCWGG 4 cut(s) 1103, 1668, 2675, 2680
BcnI CCSGG 1 cut(s) 1023
BcoDI GTCTC 4 cut(s) 734, 1277, 2204, 2664
BcuI ACTAGT 1 cut(s) 887
BfaI CTAG 6 cut(s) 792, 888, 1110, 1464, 1788, 1980
BfmI CTRYAG 2 cut(s) 21, 117
BfoI RGCGCY 1 cut(s) 2453
BfrI CTTAAG 1 cut(s) 1532
BfuAI ACCTGC 1 cut(s) 1465
BglII AGATCT 1 cut(s) 614
BisI GCNGC 6 cut(s) 345, 1140, 1655, 2394, 2548, 2844
BlsI GCNGC 6 cut(s) 346, 1141, 1656, 2395, 2549, 2845
BmcAI AGTACT 1 cut(s) 892
Bme1390I CCNGG 5 cut(s) 1023, 1103, 1668, 2675, 2680
Bme18I GGWCC 3 cut(s) 732, 1664, 2425
BmgBI CACGTC 1 cut(s) 1795
BmgT120I GGNCC 4 cut(s) 732, 1069, 1664, 2425
BmiI GGNNCC 8 cut(s) 270, 733, 808, 1070, 1107, 1479, 2079, 2621
BmrFI CCNGG 5 cut(s) 1023, 1103, 1668, 2675, 2680
BmrI ACTGGG 1 cut(s) 2892
BmsI GCATC 4 cut(s) 419, 847, 919, 1378
BmuI ACTGGG 1 cut(s) 2892
BpiI GAAGAC 1 cut(s) 1236
BpmI CTGGAG 3 cut(s) 45, 1124, 1627
Bpu14I TTCGAA 1 cut(s) 2520
BpuEI CTTGAG 5 cut(s) 631, 1766, 1886, 2450, 2849
BpuMI CCSGG 1 cut(s) 1023
Bsa29I ATCGAT 1 cut(s) 1116
BsaAI YACGTR 1 cut(s) 2003
BsaBI GATNNNNATC 3 cut(s) 441, 638, 2167
BsaHI GRCGYC 4 cut(s) 1311, 1528, 2469, 2562
BsaI GGTCTC 2 cut(s) 2204, 2664
BsaWI WCCGGW 2 cut(s) 734, 1732
Bsc4I CCNNNNNNNGG 5 cut(s) 203, 728, 849, 1138, 2813
Bse1I ACTGG 8 cut(s) 62, 962, 1644, 2100, 2229, 2508, 2562, 2898
Bse21I CCTNAGG 1 cut(s) 201
Bse8I GATNNNNATC 3 cut(s) 441, 638, 2167
BseBI CCWGG 4 cut(s) 1103, 1668, 2675, 2680
BseCI ATCGAT 1 cut(s) 1116
BseGI GGATG 8 cut(s) 639, 884, 1127, 1393, 1504, 2305, 2613, 2731
BseJI GATNNNNATC 3 cut(s) 441, 638, 2167
BseLI CCNNNNNNNGG 5 cut(s) 203, 728, 849, 1138, 2813
BseMII CTCAG 3 cut(s) 215, 2045, 2640
BseNI ACTGG 8 cut(s) 62, 962, 1644, 2100, 2229, 2508, 2562, 2898
BseRI GAGGAG 3 cut(s) 189, 194, 1883
BseXI GCAGC 2 cut(s) 1666, 2405
BsgI GTGCAG 2 cut(s) 1203, 1817
Bsh1236I CGCG 1 cut(s) 976
BshFI GGCC 6 cut(s) 554, 1071, 2678, 2768, 2806, 2824
BshNI GGYRCC 1 cut(s) 1477
BshVI ATCGAT 1 cut(s) 1116
BsiHKAI GWGCWC 1 cut(s) 626
BsiSI CCGG 3 cut(s) 735, 1022, 1733
BslFI GGGAC 5 cut(s) 314, 620, 745, 1298, 1852
BslI CCNNNNNNNGG 5 cut(s) 203, 728, 849, 1138, 2813
BsmAI GTCTC 4 cut(s) 734, 1277, 2204, 2664
BsmFI GGGAC 5 cut(s) 314, 620, 745, 1298, 1852
BsnI GGCC 6 cut(s) 554, 1071, 2678, 2768, 2806, 2824
Bso31I GGTCTC 2 cut(s) 2204, 2664
Bsp119I TTCGAA 1 cut(s) 2520
Bsp1286I GDGCHC 1 cut(s) 626
BspANI GGCC 6 cut(s) 554, 1071, 2678, 2768, 2806, 2824
BspCNI CTCAG 3 cut(s) 214, 2044, 2641
BspDI ATCGAT 1 cut(s) 1116
BspFNI CGCG 1 cut(s) 976
BspHI TCATGA 4 cut(s) 135, 190, 642, 904
BspLI GGNNCC 8 cut(s) 270, 733, 808, 1070, 1107, 1479, 2079, 2621
BspMI ACCTGC 1 cut(s) 1465
BspPI GGATC 9 cut(s) 160, 188, 263, 276, 444, 1271, 2170, 2721, 2790
BspQI GCTCTTC 1 cut(s) 354
BspT104I TTCGAA 1 cut(s) 2520
BspT107I GGYRCC 1 cut(s) 1477
BspTI CTTAAG 1 cut(s) 1532
BspTNI GGTCTC 2 cut(s) 2204, 2664
BsrBI CCGCTC 1 cut(s) 347
BsrI ACTGG 8 cut(s) 62, 962, 1644, 2100, 2229, 2508, 2562, 2898
BssNAI GTATAC 1 cut(s) 1019
BssNI GRCGYC 4 cut(s) 1311, 1528, 2469, 2562
BssSI CACGAG 1 cut(s) 675
Bst1107I GTATAC 1 cut(s) 1019
Bst2BI CACGAG 1 cut(s) 675
Bst2UI CCWGG 4 cut(s) 1103, 1668, 2675, 2680
Bst4CI ACNGT 5 cut(s) 11, 1449, 1707, 1921, 2418
Bst6I CTCTTC 6 cut(s) 36, 354, 1219, 1434, 1566, 2145
BstACI GRCGYC 4 cut(s) 1311, 1528, 2469, 2562
BstAFI CTTAAG 1 cut(s) 1532
BstAPI GCANNNNNTGC 1 cut(s) 670
BstBAI YACGTR 1 cut(s) 2003
BstBI TTCGAA 1 cut(s) 2520
BstC8I GCNNGC 4 cut(s) 317, 1073, 1163, 2448
BstDEI CTNAG 7 cut(s) 201, 510, 2031, 2062, 2453, 2491, 2649
BstEII GGTNACC 1 cut(s) 168
BstENI CCTNNNNNAGG 1 cut(s) 726
BstF5I GGATG 8 cut(s) 639, 884, 1127, 1393, 1504, 2305, 2613, 2731
BstFNI CGCG 1 cut(s) 976
BstH2I RGCGCY 1 cut(s) 2453
BstHHI GCGC 1 cut(s) 2452
BstMAI GTCTC 4 cut(s) 734, 1277, 2204, 2664
BstMWI GCNNNNNNNGC 6 cut(s) 670, 1534, 1629, 1638, 2393, 2786
BstNI CCWGG 4 cut(s) 1103, 1668, 2675, 2680
BstNSI RCATGY 4 cut(s) 864, 1207, 2276, 2635
BstPI GGTNACC 1 cut(s) 168
BstSCI CCNGG 5 cut(s) 1021, 1101, 1666, 2673, 2678
BstSFI CTRYAG 2 cut(s) 21, 117
BstUI CGCG 1 cut(s) 976
BstV1I GCAGC 2 cut(s) 1666, 2405
BstV2I GAAGAC 1 cut(s) 1236
BstX2I RGATCY 5 cut(s) 268, 436, 614, 1276, 2782
BstXI CCANNNNNNTGG 2 cut(s) 2181, 2776
BstYI RGATCY 5 cut(s) 268, 436, 614, 1276, 2782
BstZ17I GTATAC 1 cut(s) 1019
Bsu15I ATCGAT 1 cut(s) 1116
Bsu36I CCTNAGG 1 cut(s) 201
BsuRI GGCC 6 cut(s) 554, 1071, 2678, 2768, 2806, 2824
BsuTUI ATCGAT 1 cut(s) 1116
BtrI CACGTC 1 cut(s) 1795
BtsCI GGATG 8 cut(s) 639, 884, 1127, 1393, 1504, 2305, 2613, 2731
BtsIMutI CAGTG 5 cut(s) 366, 969, 1651, 2093, 2222
BveI ACCTGC 1 cut(s) 1465
Cac8I GCNNGC 4 cut(s) 317, 1073, 1163, 2448
CaiI CAGNNNCTG 2 cut(s) 368, 2904
CciI TCATGA 4 cut(s) 135, 190, 642, 904
CfoI GCGC 1 cut(s) 2452
Cfr13I GGNCC 4 cut(s) 732, 1069, 1664, 2425
ClaI ATCGAT 1 cut(s) 1116
CseI GACGC 5 cut(s) 231, 1300, 1517, 2193, 2570
Csp6I GTAC 8 cut(s) 322, 800, 891, 999, 1694, 2107, 2419, 2626
CviQI GTAC 8 cut(s) 322, 800, 891, 999, 1694, 2107, 2419, 2626
DdeI CTNAG 7 cut(s) 201, 510, 2031, 2062, 2453, 2491, 2649
EaeI YGGCCR 2 cut(s) 552, 2766
Eam1104I CTCTTC 6 cut(s) 36, 354, 1219, 1434, 1566, 2145
EarI CTCTTC 6 cut(s) 36, 354, 1219, 1434, 1566, 2145
EciI GGCGGA 1 cut(s) 2795
Eco147I AGGCCT 1 cut(s) 2824
Eco31I GGTCTC 2 cut(s) 2204, 2664
Eco32I GATATC 2 cut(s) 1336, 1561
Eco47I GGWCC 3 cut(s) 732, 1664, 2425
Eco57I CTGAAG 3 cut(s) 72, 1572, 2837
Eco72I CACGTG 1 cut(s) 2003
Eco81I CCTNAGG 1 cut(s) 201
Eco91I GGTNACC 1 cut(s) 168
EcoNI CCTNNNNNAGG 1 cut(s) 726
EcoO109I RGGNCCY 1 cut(s) 1069
EcoO65I GGTNACC 1 cut(s) 168
EcoRI GAATTC 1 cut(s) 1814
EcoRII CCWGG 4 cut(s) 1101, 1666, 2673, 2678
EcoRV GATATC 2 cut(s) 1336, 1561
EcoT22I ATGCAT 2 cut(s) 412, 862
FalI AAGNNNNNCTT 8 cut(s) 503, 535, 1814, 1846, 2109, 2141, 2693, 2725
FaqI GGGAC 5 cut(s) 314, 620, 745, 1298, 1852
FauI CCCGC 2 cut(s) 1730, 2563
FauNDI CATATG 2 cut(s) 749, 812
FblI GTMKAC 3 cut(s) 1018, 1380, 1599
Fnu4HI GCNGC 6 cut(s) 345, 1140, 1655, 2394, 2548, 2844
FokI GGATG 8 cut(s) 646, 891, 1134, 1400, 1511, 2312, 2620, 2738
Fsp4HI GCNGC 6 cut(s) 345, 1140, 1655, 2394, 2548, 2844
FspBI CTAG 6 cut(s) 792, 888, 1110, 1464, 1788, 1980
GlaI GCGC 1 cut(s) 2451
GluI GCNGC 6 cut(s) 345, 1140, 1655, 2394, 2548, 2844
GsuI CTGGAG 3 cut(s) 45, 1124, 1627
HaeII RGCGCY 1 cut(s) 2453
HaeIII GGCC 6 cut(s) 554, 1071, 2678, 2768, 2806, 2824
HapII CCGG 3 cut(s) 735, 1022, 1733
HgaI GACGC 5 cut(s) 231, 1300, 1517, 2193, 2570
HhaI GCGC 1 cut(s) 2452
Hin1I GRCGYC 4 cut(s) 1311, 1528, 2469, 2562
Hin6I GCGC 1 cut(s) 2450
HinP1I GCGC 1 cut(s) 2450
HincII GTYRAC 1 cut(s) 1710
HindII GTYRAC 1 cut(s) 1710
HinfI GANTC 4 cut(s) 718, 1426, 1908, 2881
HpaII CCGG 3 cut(s) 735, 1022, 1733
Hpy166II GTNNAC 9 cut(s) 1019, 1381, 1548, 1580, 1600, 1710, 1924, 2000, 2278
Hpy188I TCNGA 8 cut(s) 427, 915, 1820, 2034, 2209, 2619, 2761, 2856
Hpy188III TCNNGA 9 cut(s) 136, 191, 643, 766, 905, 1280, 2340, 2648, 2723
Hpy8I GTNNAC 9 cut(s) 1019, 1381, 1548, 1580, 1600, 1710, 1924, 2000, 2278
Hpy99I CGWCG 2 cut(s) 450, 2619
HpyAV CCTTC 7 cut(s) 224, 1016, 1351, 1547, 1604, 1922, 2835
HpyCH4III ACNGT 5 cut(s) 11, 1449, 1707, 1921, 2418
HpyCH4IV ACGT 4 cut(s) 285, 1794, 2002, 2469
HpyF10VI GCNNNNNNNGC 6 cut(s) 670, 1534, 1629, 1638, 2393, 2786
HpyF3I CTNAG 7 cut(s) 201, 510, 2031, 2062, 2453, 2491, 2649
HpySE526I ACGT 4 cut(s) 285, 1794, 2002, 2469
Hsp92I GRCGYC 4 cut(s) 1311, 1528, 2469, 2562
HspAI GCGC 1 cut(s) 2450
LguI GCTCTTC 1 cut(s) 354
LmnI GCTCC 4 cut(s) 806, 1105, 1646, 2497
Lsp1109I GCAGC 2 cut(s) 1666, 2405
LweI GCATC 4 cut(s) 419, 847, 919, 1378
MaeI CTAG 6 cut(s) 792, 888, 1110, 1464, 1788, 1980
MaeII ACGT 4 cut(s) 285, 1794, 2002, 2469
MaeIII GTNAC 7 cut(s) 168, 364, 881, 1790, 2187, 2465, 2705
MbiI CCGCTC 1 cut(s) 347
MfeI CAATTG 2 cut(s) 504, 1054
MflI RGATCY 5 cut(s) 268, 436, 614, 1276, 2782
MhlI GDGCHC 1 cut(s) 626
MlsI TGGCCA 1 cut(s) 554
MluI ACGCGT 1 cut(s) 974
MluNI TGGCCA 1 cut(s) 554
MlyI GAGTC 2 cut(s) 712, 1420
MmeI TCCRAC 2 cut(s) 856, 2597
Mox20I TGGCCA 1 cut(s) 554
Mph1103I ATGCAT 2 cut(s) 412, 862
MscI TGGCCA 1 cut(s) 554
MslI CAYNNNNRTG 3 cut(s) 2046, 2179, 2271
Msp20I TGGCCA 1 cut(s) 554
MspA1I CMGCKG 1 cut(s) 122
MspCI CTTAAG 1 cut(s) 1532
MspI CCGG 3 cut(s) 735, 1022, 1733
MspR9I CCNGG 5 cut(s) 1023, 1103, 1668, 2675, 2680
MunI CAATTG 2 cut(s) 504, 1054
MvaI CCWGG 4 cut(s) 1103, 1668, 2675, 2680
MvnI CGCG 1 cut(s) 976
MwoI GCNNNNNNNGC 6 cut(s) 670, 1534, 1629, 1638, 2393, 2786
NciI CCSGG 1 cut(s) 1023
NdeI CATATG 2 cut(s) 749, 812
NlaIV GGNNCC 8 cut(s) 270, 733, 808, 1070, 1107, 1479, 2079, 2621
NmuCI GTSAC 6 cut(s) 168, 364, 881, 1790, 2465, 2705
NsiI ATGCAT 2 cut(s) 412, 862
NspI RCATGY 4 cut(s) 864, 1207, 2276, 2635
NspV TTCGAA 1 cut(s) 2520
PagI TCATGA 4 cut(s) 135, 190, 642, 904
PaqCI CACCTGC 1 cut(s) 1465
PceI AGGCCT 1 cut(s) 2824
PciI ACATGT 1 cut(s) 2272
PciSI GCTCTTC 1 cut(s) 354
PfeI GAWTC 2 cut(s) 1908, 2881
PflMI CCANNNNNTGG 1 cut(s) 849
PfoI TCCNGGA 1 cut(s) 1666
PkrI GCNGC 6 cut(s) 346, 1141, 1656, 2395, 2549, 2845
PleI GAGTC 2 cut(s) 712, 1420
PmaCI CACGTG 1 cut(s) 2003
PmlI CACGTG 1 cut(s) 2003
PpsI GAGTC 2 cut(s) 712, 1420
Ppu21I YACGTR 1 cut(s) 2003
PscI ACATGT 1 cut(s) 2272
PshBI ATTAAT 1 cut(s) 1329
Psp6I CCWGG 4 cut(s) 1101, 1666, 2673, 2678
PspCI CACGTG 1 cut(s) 2003
PspEI GGTNACC 1 cut(s) 168
PspGI CCWGG 4 cut(s) 1101, 1666, 2673, 2678
PspN4I GGNNCC 8 cut(s) 270, 733, 808, 1070, 1107, 1479, 2079, 2621
PspPI GGNCC 4 cut(s) 732, 1069, 1664, 2425
PsrI GAACNNNNNNTAC 2 cut(s) 1009, 1041
PstNI CAGNNNCTG 2 cut(s) 368, 2904
PsuI RGATCY 5 cut(s) 268, 436, 614, 1276, 2782
RsaI GTAC 8 cut(s) 323, 801, 892, 1000, 1695, 2108, 2420, 2627
RsaNI GTAC 8 cut(s) 322, 800, 891, 999, 1694, 2107, 2419, 2626
RseI CAYNNNNRTG 3 cut(s) 2046, 2179, 2271
SapI GCTCTTC 1 cut(s) 354
SatI GCNGC 6 cut(s) 345, 1140, 1655, 2394, 2548, 2844
Sau96I GGNCC 4 cut(s) 732, 1069, 1664, 2425
ScaI AGTACT 1 cut(s) 892
SchI GAGTC 2 cut(s) 712, 1420
ScrFI CCNGG 5 cut(s) 1023, 1103, 1668, 2675, 2680
SduI GDGCHC 1 cut(s) 626
SfaNI GCATC 4 cut(s) 419, 847, 919, 1378
SfcI CTRYAG 2 cut(s) 21, 117
SfuI TTCGAA 1 cut(s) 2520
SinI GGWCC 3 cut(s) 732, 1664, 2425
SmiMI CAYNNNNRTG 3 cut(s) 2046, 2179, 2271
SmlI CTYRAG 6 cut(s) 610, 1532, 1781, 1865, 2429, 2864
SmoI CTYRAG 6 cut(s) 610, 1532, 1781, 1865, 2429, 2864
SpeI ACTAGT 1 cut(s) 887
SseBI AGGCCT 1 cut(s) 2824
SspI AATATT 3 cut(s) 491, 1848, 2543
SspMI CTAG 6 cut(s) 792, 888, 1110, 1464, 1788, 1980
StuI AGGCCT 1 cut(s) 2824
StyD4I CCNGG 5 cut(s) 1021, 1101, 1666, 2673, 2678
TaaI ACNGT 5 cut(s) 11, 1449, 1707, 1921, 2418
TaiI ACGT 4 cut(s) 288, 1797, 2005, 2472
TaqI TCGA 6 cut(s) 77, 467, 865, 1116, 1424, 2520
TatI WGTACW 4 cut(s) 799, 890, 998, 2106
TauI GCSGC 4 cut(s) 347, 1142, 2550, 2846
TfiI GAWTC 2 cut(s) 1908, 2881
TscAI CASTG 5 cut(s) 373, 969, 1651, 2100, 2229
TseFI GTSAC 6 cut(s) 168, 364, 881, 1790, 2465, 2705
TseI GCWGC 2 cut(s) 1654, 2393
Tsp45I GTSAC 6 cut(s) 168, 364, 881, 1790, 2465, 2705
TspGWI ACGGA 4 cut(s) 165, 1711, 2206, 2283
TspRI CASTG 5 cut(s) 373, 969, 1651, 2100, 2229
Van91I CCANNNNNTGG 1 cut(s) 849
Vha464I CTTAAG 1 cut(s) 1532
VpaK11BI GGWCC 3 cut(s) 732, 1664, 2425
VspI ATTAAT 1 cut(s) 1329
XagI CCTNNNNNAGG 1 cut(s) 726
XapI RAATTY 7 cut(s) 127, 402, 769, 1078, 1189, 1814, 2718
XceI RCATGY 4 cut(s) 864, 1207, 2276, 2635
XcmI CCANNNNNNNNNTGG 1 cut(s) 1895
XmiI GTMKAC 3 cut(s) 1018, 1380, 1599
XspI CTAG 6 cut(s) 792, 888, 1110, 1464, 1788, 1980
ZraI GACGTC 1 cut(s) 2470
ZrmI AGTACT 1 cut(s) 892
Zsp2I ATGCAT 2 cut(s) 412, 862
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.