Cyclic nucleotide-gated ion channel 1-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 2 cut(s) | 1960, 1968 |
| AccI | GTMKAC | 2 cut(s) | 370, 962 |
| AccII | CGCG | 2 cut(s) | 645, 1706 |
| AccIII | TCCGGA | 1 cut(s) | 584 |
| AciI | CCGC | 3 cut(s) | 119, 1706, 1834 |
| AclWI | GGATC | 6 cut(s) | 106, 218, 1603, 1757, 1770, 1950 |
| AcsI | RAATTY | 6 cut(s) | 145, 357, 917, 980, 1192, 1744 |
| AcuI | CTGAAG | 2 cut(s) | 1262, 1311 |
| AfaI | GTAC | 6 cut(s) | 740, 814, 1048, 1524, 1736, 1863 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 548, 1056, 1441, 1879 |
| AflIII | ACRYGT | 1 cut(s) | 643 |
| AjnI | CCWGG | 1 cut(s) | 543 |
| AluBI | AGCT | 9 cut(s) | 425, 473, 494, 527, 731, 1020, 1606, 1632, 1699 |
| AluI | AGCT | 9 cut(s) | 425, 473, 494, 527, 731, 1020, 1606, 1632, 1699 |
| Alw21I | GWGCWC | 5 cut(s) | 36, 733, 1022, 1434, 1969 |
| Alw26I | GTCTC | 2 cut(s) | 220, 1788 |
| AlwI | GGATC | 6 cut(s) | 106, 218, 1603, 1757, 1770, 1950 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1786 |
| Aor13HI | TCCGGA | 1 cut(s) | 584 |
| AoxI | GGCC | 2 cut(s) | 294, 1932 |
| ApeKI | GCWGC | 1 cut(s) | 1006 |
| ApoI | RAATTY | 6 cut(s) | 145, 357, 917, 980, 1192, 1744 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1605 |
| AspLEI | GCGC | 3 cut(s) | 940, 1353, 1706 |
| AspS9I | GGNCC | 2 cut(s) | 1536, 1932 |
| AsuC2I | CCSGG | 1 cut(s) | 123 |
| AsuHPI | GGTGA | 1 cut(s) | 1741 |
| AsuII | TTCGAA | 1 cut(s) | 569 |
| AsuNHI | GCTAGC | 1 cut(s) | 1901 |
| AvaII | GGWCC | 1 cut(s) | 1536 |
| BamHI | GGATCC | 1 cut(s) | 1762 |
| BanII | GRGCYC | 3 cut(s) | 584, 733, 1022 |
| Bbv12I | GWGCWC | 5 cut(s) | 36, 733, 1022, 1434, 1969 |
| BbvI | GCAGC | 1 cut(s) | 993 |
| BccI | CCATC | 4 cut(s) | 65, 757, 865, 1736 |
| BceAI | ACGGC | 1 cut(s) | 1058 |
| BciT130I | CCWGG | 1 cut(s) | 545 |
| BcnI | CCSGG | 1 cut(s) | 123 |
| BcoDI | GTCTC | 2 cut(s) | 220, 1788 |
| BfaI | CTAG | 7 cut(s) | 810, 953, 1218, 1233, 1896, 1902, 1970 |
| BfmI | CTRYAG | 4 cut(s) | 887, 1127, 1531, 1857 |
| BfuAI | ACCTGC | 2 cut(s) | 1960, 1968 |
| BglII | AGATCT | 2 cut(s) | 325, 909 |
| BisI | GCNGC | 2 cut(s) | 1007, 1834 |
| BlpI | GCTNAGC | 1 cut(s) | 1700 |
| BlsI | GCNGC | 2 cut(s) | 1008, 1835 |
| BmcAI | AGTACT | 1 cut(s) | 1736 |
| Bme1390I | CCNGG | 2 cut(s) | 123, 545 |
| Bme18I | GGWCC | 1 cut(s) | 1536 |
| BmgT120I | GGNCC | 2 cut(s) | 1536, 1932 |
| BmiI | GGNNCC | 3 cut(s) | 583, 1564, 1764 |
| BmrFI | CCNGG | 2 cut(s) | 123, 545 |
| BmsI | GCATC | 2 cut(s) | 206, 925 |
| BmtI | GCTAGC | 1 cut(s) | 1905 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1473, 1505 |
| BpmI | CTGGAG | 2 cut(s) | 114, 228 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1700 |
| Bpu14I | TTCGAA | 1 cut(s) | 569 |
| BpuEI | CTTGAG | 4 cut(s) | 331, 1358, 1457, 1595 |
| BpuMI | CCSGG | 1 cut(s) | 123 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1505 |
| BsaJI | CCNNGG | 2 cut(s) | 390, 543 |
| BsaWI | WCCGGW | 1 cut(s) | 584 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1854, 1884 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 548, 1056, 1441, 1879 |
| Bse118I | RCCGGY | 1 cut(s) | 1441 |
| Bse1I | ACTGG | 5 cut(s) | 97, 245, 1742, 1780, 1958 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1505 |
| BseAI | TCCGGA | 1 cut(s) | 584 |
| BseBI | CCWGG | 1 cut(s) | 545 |
| BseDI | CCNNGG | 2 cut(s) | 390, 543 |
| BseGI | GGATG | 7 cut(s) | 386, 463, 507, 593, 705, 806, 1308 |
| BseJI | GATNNNNATC | 1 cut(s) | 1505 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 548, 1056, 1441, 1879 |
| BseMII | CTCAG | 5 cut(s) | 68, 390, 1007, 1446, 1691 |
| BseNI | ACTGG | 5 cut(s) | 97, 245, 1742, 1780, 1958 |
| BseRI | GAGGAG | 2 cut(s) | 90, 1808 |
| BseXI | GCAGC | 1 cut(s) | 993 |
| BsgI | GTGCAG | 2 cut(s) | 977, 1938 |
| Bsh1236I | CGCG | 2 cut(s) | 645, 1706 |
| BshFI | GGCC | 2 cut(s) | 296, 1934 |
| BsiHKAI | GWGCWC | 5 cut(s) | 36, 733, 1022, 1434, 1969 |
| BsiSI | CCGG | 3 cut(s) | 123, 585, 1442 |
| BslFI | GGGAC | 4 cut(s) | 356, 623, 1239, 1598 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 548, 1056, 1441, 1879 |
| BsmAI | GTCTC | 2 cut(s) | 220, 1788 |
| BsmFI | GGGAC | 4 cut(s) | 356, 623, 1239, 1598 |
| BsnI | GGCC | 2 cut(s) | 296, 1934 |
| Bsp119I | TTCGAA | 1 cut(s) | 569 |
| Bsp1286I | GDGCHC | 6 cut(s) | 36, 584, 733, 1022, 1434, 1969 |
| Bsp13I | TCCGGA | 1 cut(s) | 584 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1700 |
| BspACI | CCGC | 3 cut(s) | 119, 1706, 1834 |
| BspANI | GGCC | 2 cut(s) | 296, 1934 |
| BspCNI | CTCAG | 5 cut(s) | 67, 391, 1008, 1447, 1692 |
| BspEI | TCCGGA | 1 cut(s) | 584 |
| BspFNI | CGCG | 2 cut(s) | 645, 1706 |
| BspLI | GGNNCC | 3 cut(s) | 583, 1564, 1764 |
| BspMAI | CTGCAG | 1 cut(s) | 1131 |
| BspMI | ACCTGC | 2 cut(s) | 1960, 1968 |
| BspOI | GCTAGC | 1 cut(s) | 1905 |
| BspPI | GGATC | 6 cut(s) | 106, 218, 1603, 1757, 1770, 1950 |
| BspQI | GCTCTTC | 2 cut(s) | 1596, 1639 |
| BspT104I | TTCGAA | 1 cut(s) | 569 |
| BsrFI | RCCGGY | 1 cut(s) | 1441 |
| BsrI | ACTGG | 5 cut(s) | 97, 245, 1742, 1780, 1958 |
| BssAI | RCCGGY | 1 cut(s) | 1441 |
| BssECI | CCNNGG | 2 cut(s) | 390, 543 |
| BssNAI | GTATAC | 1 cut(s) | 371 |
| BssT1I | CCWWGG | 1 cut(s) | 390 |
| Bst1107I | GTATAC | 1 cut(s) | 371 |
| Bst2UI | CCWGG | 1 cut(s) | 545 |
| Bst4CI | ACNGT | 5 cut(s) | 992, 1104, 1463, 1522, 1861 |
| Bst6I | CTCTTC | 4 cut(s) | 39, 335, 1596, 1639 |
| BstBI | TTCGAA | 1 cut(s) | 569 |
| BstC8I | GCNNGC | 4 cut(s) | 417, 1097, 1838, 1903 |
| BstDEI | CTNAG | 5 cut(s) | 54, 399, 1016, 1455, 1700 |
| BstF5I | GGATG | 7 cut(s) | 386, 463, 507, 593, 705, 806, 1308 |
| BstFNI | CGCG | 2 cut(s) | 645, 1706 |
| BstHHI | GCGC | 3 cut(s) | 940, 1353, 1706 |
| BstMAI | GTCTC | 2 cut(s) | 220, 1788 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 479, 1438 |
| BstNI | CCWGG | 1 cut(s) | 545 |
| BstSCI | CCNGG | 2 cut(s) | 121, 543 |
| BstSFI | CTRYAG | 4 cut(s) | 887, 1127, 1531, 1857 |
| BstUI | CGCG | 2 cut(s) | 645, 1706 |
| BstV1I | GCAGC | 1 cut(s) | 993 |
| BstX2I | RGATCY | 3 cut(s) | 325, 909, 1762 |
| BstYI | RGATCY | 3 cut(s) | 325, 909, 1762 |
| BstZ17I | GTATAC | 1 cut(s) | 371 |
| BsuRI | GGCC | 2 cut(s) | 296, 1934 |
| BtsCI | GGATG | 7 cut(s) | 386, 463, 507, 593, 705, 806, 1308 |
| BtsIMutI | CAGTG | 1 cut(s) | 988 |
| BveI | ACCTGC | 2 cut(s) | 1960, 1968 |
| Cac8I | GCNNGC | 4 cut(s) | 417, 1097, 1838, 1903 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1786 |
| CfoI | GCGC | 3 cut(s) | 940, 1353, 1706 |
| Cfr10I | RCCGGY | 1 cut(s) | 1441 |
| Cfr13I | GGNCC | 2 cut(s) | 1536, 1932 |
| Csp6I | GTAC | 6 cut(s) | 739, 813, 1047, 1523, 1735, 1862 |
| CviAII | CATG | 5 cut(s) | 719, 1056, 1348, 1514, 1936 |
| CviQI | GTAC | 6 cut(s) | 739, 813, 1047, 1523, 1735, 1862 |
| DdeI | CTNAG | 5 cut(s) | 54, 399, 1016, 1455, 1700 |
| DraI | TTTAAA | 2 cut(s) | 24, 916 |
| Eam1104I | CTCTTC | 4 cut(s) | 39, 335, 1596, 1639 |
| EarI | CTCTTC | 4 cut(s) | 39, 335, 1596, 1639 |
| Ecl136II | GAGCTC | 2 cut(s) | 731, 1020 |
| Eco130I | CCWWGG | 1 cut(s) | 390 |
| Eco24I | GRGCYC | 3 cut(s) | 584, 733, 1022 |
| Eco47I | GGWCC | 1 cut(s) | 1536 |
| Eco53kI | GAGCTC | 2 cut(s) | 731, 1020 |
| Eco57I | CTGAAG | 2 cut(s) | 1262, 1311 |
| EcoICRI | GAGCTC | 2 cut(s) | 731, 1020 |
| EcoRII | CCWGG | 1 cut(s) | 543 |
| EcoT14I | CCWWGG | 1 cut(s) | 390 |
| EcoT22I | ATGCAT | 1 cut(s) | 1057 |
| EcoT38I | GRGCYC | 3 cut(s) | 584, 733, 1022 |
| ErhI | CCWWGG | 1 cut(s) | 390 |
| FaeI | CATG | 5 cut(s) | 722, 1059, 1351, 1517, 1939 |
| FaqI | GGGAC | 4 cut(s) | 356, 623, 1239, 1598 |
| FatI | CATG | 5 cut(s) | 718, 1055, 1347, 1513, 1935 |
| FauI | CCCGC | 1 cut(s) | 126 |
| FblI | GTMKAC | 2 cut(s) | 370, 962 |
| Fnu4HI | GCNGC | 2 cut(s) | 1007, 1834 |
| FokI | GGATG | 7 cut(s) | 373, 470, 494, 600, 692, 813, 1295 |
| FriOI | GRGCYC | 3 cut(s) | 584, 733, 1022 |
| Fsp4HI | GCNGC | 2 cut(s) | 1007, 1834 |
| FspBI | CTAG | 7 cut(s) | 810, 953, 1218, 1233, 1896, 1902, 1970 |
| GlaI | GCGC | 3 cut(s) | 939, 1352, 1705 |
| GluI | GCNGC | 2 cut(s) | 1007, 1834 |
| GsuI | CTGGAG | 2 cut(s) | 114, 228 |
| HaeIII | GGCC | 2 cut(s) | 296, 1934 |
| HapII | CCGG | 3 cut(s) | 123, 585, 1442 |
| HhaI | GCGC | 3 cut(s) | 940, 1353, 1706 |
| Hin1II | CATG | 5 cut(s) | 722, 1059, 1351, 1517, 1939 |
| Hin6I | GCGC | 3 cut(s) | 938, 1351, 1704 |
| HinP1I | GCGC | 3 cut(s) | 938, 1351, 1704 |
| HincII | GTYRAC | 2 cut(s) | 806, 963 |
| HindII | GTYRAC | 2 cut(s) | 806, 963 |
| HinfI | GANTC | 2 cut(s) | 107, 944 |
| HpaII | CCGG | 3 cut(s) | 123, 585, 1442 |
| HphI | GGTGA | 1 cut(s) | 1741 |
| Hpy166II | GTNNAC | 6 cut(s) | 371, 658, 806, 830, 963, 1447 |
| Hpy8I | GTNNAC | 6 cut(s) | 371, 658, 806, 830, 963, 1447 |
| Hpy99I | CGWCG | 3 cut(s) | 260, 837, 1833 |
| HpyAV | CCTTC | 6 cut(s) | 179, 286, 571, 1237, 1335, 1933 |
| HpyCH4III | ACNGT | 5 cut(s) | 992, 1104, 1463, 1522, 1861 |
| HpyCH4IV | ACGT | 2 cut(s) | 790, 1864 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 479, 1438 |
| HpyF3I | CTNAG | 5 cut(s) | 54, 399, 1016, 1455, 1700 |
| HpySE526I | ACGT | 2 cut(s) | 790, 1864 |
| Hsp92II | CATG | 5 cut(s) | 722, 1059, 1351, 1517, 1939 |
| HspAI | GCGC | 3 cut(s) | 938, 1351, 1704 |
| Kpn2I | TCCGGA | 1 cut(s) | 584 |
| LguI | GCTCTTC | 2 cut(s) | 1596, 1639 |
| LmnI | GCTCC | 2 cut(s) | 587, 728 |
| Lsp1109I | GCAGC | 1 cut(s) | 993 |
| LweI | GCATC | 2 cut(s) | 206, 925 |
| MaeI | CTAG | 7 cut(s) | 810, 953, 1218, 1233, 1896, 1902, 1970 |
| MaeII | ACGT | 2 cut(s) | 790, 1864 |
| MaeIII | GTNAC | 5 cut(s) | 64, 315, 403, 791, 1675 |
| MfeI | CAATTG | 2 cut(s) | 1361, 1612 |
| MflI | RGATCY | 3 cut(s) | 325, 909, 1762 |
| MhlI | GDGCHC | 6 cut(s) | 36, 584, 733, 1022, 1434, 1969 |
| MluI | ACGCGT | 1 cut(s) | 643 |
| MlyI | GAGTC | 1 cut(s) | 938 |
| MmeI | TCCRAC | 3 cut(s) | 972, 1662, 1770 |
| Mph1103I | ATGCAT | 1 cut(s) | 1057 |
| MroI | TCCGGA | 1 cut(s) | 584 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1605 |
| MseI | TTAA | 7 cut(s) | 23, 138, 252, 915, 1668, 1715, 1875 |
| MslI | CAYNNNNRTG | 1 cut(s) | 350 |
| MspI | CCGG | 3 cut(s) | 123, 585, 1442 |
| MspR9I | CCNGG | 2 cut(s) | 123, 545 |
| MunI | CAATTG | 2 cut(s) | 1361, 1612 |
| MvaI | CCWGG | 1 cut(s) | 545 |
| MvnI | CGCG | 2 cut(s) | 645, 1706 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 479, 1438 |
| NciI | CCSGG | 1 cut(s) | 123 |
| NheI | GCTAGC | 1 cut(s) | 1901 |
| NlaIII | CATG | 5 cut(s) | 722, 1059, 1351, 1517, 1939 |
| NlaIV | GGNNCC | 3 cut(s) | 583, 1564, 1764 |
| NmuCI | GTSAC | 3 cut(s) | 403, 791, 1675 |
| NsiI | ATGCAT | 1 cut(s) | 1057 |
| NspV | TTCGAA | 1 cut(s) | 569 |
| PciSI | GCTCTTC | 2 cut(s) | 1596, 1639 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1605 |
| PfeI | GAWTC | 1 cut(s) | 107 |
| PkrI | GCNGC | 2 cut(s) | 1008, 1835 |
| PleI | GAGTC | 1 cut(s) | 938 |
| PpsI | GAGTC | 1 cut(s) | 938 |
| Psp124BI | GAGCTC | 2 cut(s) | 733, 1022 |
| Psp6I | CCWGG | 1 cut(s) | 543 |
| PspGI | CCWGG | 1 cut(s) | 543 |
| PspN4I | GGNNCC | 3 cut(s) | 583, 1564, 1764 |
| PspPI | GGNCC | 2 cut(s) | 1536, 1932 |
| PstI | CTGCAG | 1 cut(s) | 1131 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1786 |
| PsuI | RGATCY | 3 cut(s) | 325, 909, 1762 |
| RsaI | GTAC | 6 cut(s) | 740, 814, 1048, 1524, 1736, 1863 |
| RsaNI | GTAC | 6 cut(s) | 739, 813, 1047, 1523, 1735, 1862 |
| RseI | CAYNNNNRTG | 1 cut(s) | 350 |
| SacI | GAGCTC | 2 cut(s) | 733, 1022 |
| SalI | GTCGAC | 1 cut(s) | 961 |
| SapI | GCTCTTC | 2 cut(s) | 1596, 1639 |
| SaqAI | TTAA | 7 cut(s) | 23, 138, 252, 915, 1668, 1715, 1875 |
| SatI | GCNGC | 2 cut(s) | 1007, 1834 |
| Sau96I | GGNCC | 2 cut(s) | 1536, 1932 |
| ScaI | AGTACT | 1 cut(s) | 1736 |
| SchI | GAGTC | 1 cut(s) | 938 |
| ScrFI | CCNGG | 2 cut(s) | 123, 545 |
| SduI | GDGCHC | 6 cut(s) | 36, 584, 733, 1022, 1434, 1969 |
| SfaNI | GCATC | 2 cut(s) | 206, 925 |
| SfcI | CTRYAG | 4 cut(s) | 887, 1127, 1531, 1857 |
| SfuI | TTCGAA | 1 cut(s) | 569 |
| SinI | GGWCC | 1 cut(s) | 1536 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 350 |
| SmlI | CTYRAG | 4 cut(s) | 310, 1373, 1436, 1574 |
| SmoI | CTYRAG | 4 cut(s) | 310, 1373, 1436, 1574 |
| SsiI | CCGC | 3 cut(s) | 119, 1706, 1834 |
| SspMI | CTAG | 7 cut(s) | 810, 953, 1218, 1233, 1896, 1902, 1970 |
| SstI | GAGCTC | 2 cut(s) | 733, 1022 |
| StyD4I | CCNGG | 2 cut(s) | 121, 543 |
| StyI | CCWWGG | 1 cut(s) | 390 |
| TaaI | ACNGT | 5 cut(s) | 992, 1104, 1463, 1522, 1861 |
| TaiI | ACGT | 2 cut(s) | 793, 1867 |
| TaqI | TCGA | 6 cut(s) | 110, 569, 962, 1655, 1686, 1776 |
| TatI | WGTACW | 2 cut(s) | 1522, 1734 |
| TauI | GCSGC | 1 cut(s) | 1836 |
| TfiI | GAWTC | 1 cut(s) | 107 |
| Tru1I | TTAA | 7 cut(s) | 23, 138, 252, 915, 1668, 1715, 1875 |
| Tru9I | TTAA | 7 cut(s) | 23, 138, 252, 915, 1668, 1715, 1875 |
| TscAI | CASTG | 1 cut(s) | 995 |
| TseFI | GTSAC | 3 cut(s) | 403, 791, 1675 |
| TseI | GCWGC | 1 cut(s) | 1006 |
| Tsp45I | GTSAC | 3 cut(s) | 403, 791, 1675 |
| TspDTI | ATGAA | 5 cut(s) | 590, 1196, 1252, 1495, 1952 |
| TspGWI | ACGGA | 3 cut(s) | 53, 1189, 1817 |
| TspRI | CASTG | 1 cut(s) | 995 |
| VpaK11BI | GGWCC | 1 cut(s) | 1536 |
| XapI | RAATTY | 6 cut(s) | 145, 357, 917, 980, 1192, 1744 |
| XbaI | TCTAGA | 1 cut(s) | 1217 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 544 |
| XmiI | GTMKAC | 2 cut(s) | 370, 962 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1605 |
| XspI | CTAG | 7 cut(s) | 810, 953, 1218, 1233, 1896, 1902, 1970 |
| ZrmI | AGTACT | 1 cut(s) | 1736 |
| Zsp2I | ATGCAT | 1 cut(s) | 1057 |