Cyclic nucleotide-gated ion channel 1-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| cNMP_binding | PF00027 | 452 - 540 | 1e-05 | Cyclic nucleotide-binding domain |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 3 cut(s) | 230, 1367, 1461 |
| AclWI | GGATC | 2 cut(s) | 164, 1692 |
| AcoI | YGGCCR | 2 cut(s) | 146, 1599 |
| AcsI | RAATTY | 4 cut(s) | 587, 983, 1015, 1628 |
| AcuI | CTGAAG | 1 cut(s) | 66 |
| AfaI | GTAC | 3 cut(s) | 755, 1037, 1434 |
| AfeI | AGCGCT | 1 cut(s) | 1262 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 253 |
| AflII | CTTAAG | 1 cut(s) | 248 |
| AflIII | ACRYGT | 1 cut(s) | 1732 |
| AjnI | CCWGG | 1 cut(s) | 723 |
| Alw21I | GWGCWC | 1 cut(s) | 748 |
| Alw26I | GTCTC | 1 cut(s) | 770 |
| AlwI | GGATC | 2 cut(s) | 164, 1692 |
| Ama87I | CYCGRG | 1 cut(s) | 1237 |
| Aor51HI | AGCGCT | 1 cut(s) | 1262 |
| AoxI | GGCC | 4 cut(s) | 146, 270, 1135, 1599 |
| ApeKI | GCWGC | 2 cut(s) | 977, 1009 |
| ApoI | RAATTY | 4 cut(s) | 587, 983, 1015, 1628 |
| AseI | ATTAAT | 1 cut(s) | 1746 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 995 |
| AspLEI | GCGC | 1 cut(s) | 1263 |
| AspS9I | GGNCC | 3 cut(s) | 40, 319, 1769 |
| AsuHPI | GGTGA | 3 cut(s) | 410, 1496, 1636 |
| AvaI | CYCGRG | 1 cut(s) | 1237 |
| AvaII | GGWCC | 3 cut(s) | 40, 319, 1769 |
| BalI | TGGCCA | 2 cut(s) | 148, 1601 |
| BanII | GRGCYC | 1 cut(s) | 748 |
| BauI | CACGAG | 1 cut(s) | 624 |
| BbsI | GAAGAC | 1 cut(s) | 362 |
| Bbv12I | GWGCWC | 1 cut(s) | 748 |
| BbvI | GCAGC | 2 cut(s) | 989, 996 |
| BccI | CCATC | 2 cut(s) | 110, 1591 |
| BciT130I | CCWGG | 1 cut(s) | 725 |
| BclI | TGATCA | 1 cut(s) | 1161 |
| BcoDI | GTCTC | 1 cut(s) | 770 |
| BfaI | CTAG | 5 cut(s) | 281, 729, 825, 1106, 1554 |
| BfmI | CTRYAG | 2 cut(s) | 891, 1441 |
| BfoI | RGCGCY | 1 cut(s) | 1264 |
| BfrI | CTTAAG | 1 cut(s) | 248 |
| BglII | AGATCT | 2 cut(s) | 301, 569 |
| BisI | GCNGC | 2 cut(s) | 978, 1010 |
| BlsI | GCNGC | 2 cut(s) | 979, 1011 |
| Bme1390I | CCNGG | 1 cut(s) | 725 |
| Bme18I | GGWCC | 3 cut(s) | 40, 319, 1769 |
| BmeT110I | CYCGRG | 1 cut(s) | 1237 |
| BmgT120I | GGNCC | 3 cut(s) | 40, 319, 1769 |
| BmiI | GGNNCC | 3 cut(s) | 42, 320, 1771 |
| BmrFI | CCNGG | 1 cut(s) | 725 |
| BmrI | ACTGGG | 1 cut(s) | 1768 |
| BmsI | GCATC | 4 cut(s) | 173, 645, 928, 1364 |
| BmuI | ACTGGG | 1 cut(s) | 1768 |
| BpiI | GAAGAC | 1 cut(s) | 362 |
| BpmI | CTGGAG | 1 cut(s) | 1331 |
| BpuEI | CTTGAG | 1 cut(s) | 1268 |
| BsaAI | YACGTR | 2 cut(s) | 137, 1035 |
| BsaJI | CCNNGG | 4 cut(s) | 382, 739, 1236, 1647 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 746, 776 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 253 |
| Bse1I | ACTGG | 4 cut(s) | 93, 1774, 1789, 1808 |
| BseBI | CCWGG | 1 cut(s) | 725 |
| BseDI | CCNNGG | 4 cut(s) | 382, 739, 1236, 1647 |
| BseGI | GGATG | 3 cut(s) | 720, 821, 1318 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 253 |
| BseMII | CTCAG | 1 cut(s) | 48 |
| BseNI | ACTGG | 4 cut(s) | 93, 1774, 1789, 1808 |
| BseRI | GAGGAG | 2 cut(s) | 1512, 1718 |
| BseXI | GCAGC | 2 cut(s) | 989, 996 |
| BshFI | GGCC | 4 cut(s) | 148, 272, 1137, 1601 |
| BsiHKAI | GWGCWC | 1 cut(s) | 748 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1237 |
| BslFI | GGGAC | 4 cut(s) | 332, 1191, 1254, 1755 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 253 |
| BsmAI | GTCTC | 1 cut(s) | 770 |
| BsmFI | GGGAC | 4 cut(s) | 332, 1191, 1254, 1755 |
| BsmI | GAATGC | 2 cut(s) | 601, 1564 |
| BsnI | GGCC | 4 cut(s) | 148, 272, 1137, 1601 |
| BsoBI | CYCGRG | 1 cut(s) | 1237 |
| Bsp1286I | GDGCHC | 1 cut(s) | 748 |
| Bsp143I | GATC | 7 cut(s) | 169, 301, 569, 1067, 1161, 1402, 1684 |
| BspACI | CCGC | 3 cut(s) | 230, 1367, 1461 |
| BspANI | GGCC | 4 cut(s) | 148, 272, 1137, 1601 |
| BspCNI | CTCAG | 1 cut(s) | 49 |
| BspLI | GGNNCC | 3 cut(s) | 42, 320, 1771 |
| BspPI | GGATC | 2 cut(s) | 164, 1692 |
| BspTI | CTTAAG | 1 cut(s) | 248 |
| BsrI | ACTGG | 4 cut(s) | 93, 1774, 1789, 1808 |
| BssECI | CCNNGG | 4 cut(s) | 382, 739, 1236, 1647 |
| BssMI | GATC | 7 cut(s) | 169, 301, 569, 1067, 1161, 1402, 1684 |
| BssSI | CACGAG | 1 cut(s) | 624 |
| BssT1I | CCWWGG | 3 cut(s) | 382, 739, 1647 |
| Bst2BI | CACGAG | 1 cut(s) | 624 |
| Bst2UI | CCWGG | 1 cut(s) | 725 |
| Bst4CI | ACNGT | 3 cut(s) | 839, 995, 1174 |
| Bst6I | CTCTTC | 2 cut(s) | 42, 1607 |
| BstAFI | CTTAAG | 1 cut(s) | 248 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 619, 1718 |
| BstBAI | YACGTR | 2 cut(s) | 137, 1035 |
| BstC8I | GCNNGC | 3 cut(s) | 784, 788, 799 |
| BstDEI | CTNAG | 6 cut(s) | 57, 93, 366, 444, 1143, 1467 |
| BstF5I | GGATG | 3 cut(s) | 720, 821, 1318 |
| BstH2I | RGCGCY | 1 cut(s) | 1264 |
| BstHHI | GCGC | 1 cut(s) | 1263 |
| BstKTI | GATC | 7 cut(s) | 172, 304, 572, 1070, 1164, 1405, 1687 |
| BstMAI | GTCTC | 1 cut(s) | 770 |
| BstMBI | GATC | 7 cut(s) | 169, 301, 569, 1067, 1161, 1402, 1684 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 619, 1718 |
| BstNI | CCWGG | 1 cut(s) | 725 |
| BstNSI | RCATGY | 1 cut(s) | 958 |
| BstSCI | CCNGG | 1 cut(s) | 723 |
| BstSFI | CTRYAG | 2 cut(s) | 891, 1441 |
| BstSNI | TACGTA | 1 cut(s) | 1035 |
| BstV1I | GCAGC | 2 cut(s) | 989, 996 |
| BstV2I | GAAGAC | 1 cut(s) | 362 |
| BstX2I | RGATCY | 2 cut(s) | 301, 569 |
| BstYI | RGATCY | 2 cut(s) | 301, 569 |
| BsuRI | GGCC | 4 cut(s) | 148, 272, 1137, 1601 |
| BtsCI | GGATG | 3 cut(s) | 720, 821, 1318 |
| BtsIMutI | CAGTG | 1 cut(s) | 86 |
| Cac8I | GCNNGC | 3 cut(s) | 784, 788, 799 |
| CfoI | GCGC | 1 cut(s) | 1263 |
| Cfr13I | GGNCC | 3 cut(s) | 40, 319, 1769 |
| Csp6I | GTAC | 3 cut(s) | 754, 1036, 1433 |
| CviAII | CATG | 4 cut(s) | 219, 734, 955, 1165 |
| CviQI | GTAC | 3 cut(s) | 754, 1036, 1433 |
| DdeI | CTNAG | 6 cut(s) | 57, 93, 366, 444, 1143, 1467 |
| DpnI | GATC | 7 cut(s) | 171, 303, 571, 1069, 1163, 1404, 1686 |
| DpnII | GATC | 7 cut(s) | 169, 301, 569, 1067, 1161, 1402, 1684 |
| EaeI | YGGCCR | 2 cut(s) | 146, 1599 |
| Eam1104I | CTCTTC | 2 cut(s) | 42, 1607 |
| EarI | CTCTTC | 2 cut(s) | 42, 1607 |
| Ecl136II | GAGCTC | 1 cut(s) | 746 |
| Eco105I | TACGTA | 1 cut(s) | 1035 |
| Eco130I | CCWWGG | 3 cut(s) | 382, 739, 1647 |
| Eco147I | AGGCCT | 1 cut(s) | 1137 |
| Eco24I | GRGCYC | 1 cut(s) | 748 |
| Eco47I | GGWCC | 3 cut(s) | 40, 319, 1769 |
| Eco47III | AGCGCT | 1 cut(s) | 1262 |
| Eco53kI | GAGCTC | 1 cut(s) | 746 |
| Eco57I | CTGAAG | 1 cut(s) | 66 |
| Eco88I | CYCGRG | 1 cut(s) | 1237 |
| EcoICRI | GAGCTC | 1 cut(s) | 746 |
| EcoO109I | RGGNCCY | 3 cut(s) | 40, 319, 1769 |
| EcoRII | CCWGG | 1 cut(s) | 723 |
| EcoT14I | CCWWGG | 3 cut(s) | 382, 739, 1647 |
| EcoT38I | GRGCYC | 1 cut(s) | 748 |
| ErhI | CCWWGG | 3 cut(s) | 382, 739, 1647 |
| FaeI | CATG | 4 cut(s) | 222, 737, 958, 1168 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 899, 931 |
| FaqI | GGGAC | 4 cut(s) | 332, 1191, 1254, 1755 |
| FatI | CATG | 4 cut(s) | 218, 733, 954, 1164 |
| FauNDI | CATATG | 1 cut(s) | 686 |
| FbaI | TGATCA | 1 cut(s) | 1161 |
| Fnu4HI | GCNGC | 2 cut(s) | 978, 1010 |
| FokI | GGATG | 3 cut(s) | 707, 828, 1325 |
| FriOI | GRGCYC | 1 cut(s) | 748 |
| Fsp4HI | GCNGC | 2 cut(s) | 978, 1010 |
| FspBI | CTAG | 5 cut(s) | 281, 729, 825, 1106, 1554 |
| GlaI | GCGC | 1 cut(s) | 1262 |
| GluI | GCNGC | 2 cut(s) | 978, 1010 |
| GsuI | CTGGAG | 1 cut(s) | 1331 |
| HaeII | RGCGCY | 1 cut(s) | 1264 |
| HaeIII | GGCC | 4 cut(s) | 148, 272, 1137, 1601 |
| HhaI | GCGC | 1 cut(s) | 1263 |
| Hin1II | CATG | 4 cut(s) | 222, 737, 958, 1168 |
| Hin6I | GCGC | 1 cut(s) | 1261 |
| HinP1I | GCGC | 1 cut(s) | 1261 |
| HincII | GTYRAC | 3 cut(s) | 499, 966, 1059 |
| HindII | GTYRAC | 3 cut(s) | 499, 966, 1059 |
| HindIII | AAGCTT | 1 cut(s) | 1469 |
| HinfI | GANTC | 5 cut(s) | 163, 667, 896, 962, 1185 |
| HphI | GGTGA | 3 cut(s) | 410, 1496, 1636 |
| Hpy166II | GTNNAC | 4 cut(s) | 499, 821, 966, 1059 |
| Hpy188I | TCNGA | 3 cut(s) | 860, 1072, 1537 |
| Hpy188III | TCNNGA | 9 cut(s) | 167, 434, 567, 935, 988, 1106, 1239, 1285, 1385 |
| Hpy8I | GTNNAC | 4 cut(s) | 499, 821, 966, 1059 |
| Hpy99I | CGWCG | 1 cut(s) | 1743 |
| HpyAV | CCTTC | 9 cut(s) | 197, 262, 420, 463, 553, 953, 1147, 1382, 1577 |
| HpyCH4III | ACNGT | 3 cut(s) | 839, 995, 1174 |
| HpyCH4IV | ACGT | 4 cut(s) | 136, 854, 1034, 1732 |
| HpyCH4V | TGCA | 7 cut(s) | 478, 613, 977, 1028, 1051, 1667, 1712 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 619, 1718 |
| HpyF3I | CTNAG | 6 cut(s) | 57, 93, 366, 444, 1143, 1467 |
| HpySE526I | ACGT | 4 cut(s) | 136, 854, 1034, 1732 |
| Hsp92II | CATG | 4 cut(s) | 222, 737, 958, 1168 |
| HspAI | GCGC | 1 cut(s) | 1261 |
| Ksp22I | TGATCA | 1 cut(s) | 1161 |
| Kzo9I | GATC | 7 cut(s) | 169, 301, 569, 1067, 1161, 1402, 1684 |
| LmnI | GCTCC | 1 cut(s) | 743 |
| Lsp1109I | GCAGC | 2 cut(s) | 989, 996 |
| LweI | GCATC | 4 cut(s) | 173, 645, 928, 1364 |
| MaeI | CTAG | 5 cut(s) | 281, 729, 825, 1106, 1554 |
| MaeII | ACGT | 4 cut(s) | 136, 854, 1034, 1732 |
| MaeIII | GTNAC | 7 cut(s) | 22, 650, 839, 865, 1247, 1337, 1621 |
| MalI | GATC | 7 cut(s) | 171, 303, 571, 1069, 1163, 1404, 1686 |
| MboI | GATC | 7 cut(s) | 169, 301, 569, 1067, 1161, 1402, 1684 |
| MboII | GAAGA | 9 cut(s) | 59, 367, 506, 529, 623, 1202, 1223, 1259, 1624 |
| MfeI | CAATTG | 1 cut(s) | 1688 |
| MflI | RGATCY | 2 cut(s) | 301, 569 |
| MhlI | GDGCHC | 1 cut(s) | 748 |
| MlsI | TGGCCA | 2 cut(s) | 148, 1601 |
| MluNI | TGGCCA | 2 cut(s) | 148, 1601 |
| MlyI | GAGTC | 2 cut(s) | 661, 971 |
| MmeI | TCCRAC | 2 cut(s) | 234, 1680 |
| Mox20I | TGGCCA | 2 cut(s) | 148, 1601 |
| MroXI | GAANNNNTTC | 1 cut(s) | 995 |
| MscI | TGGCCA | 2 cut(s) | 148, 1601 |
| MseI | TTAA | 6 cut(s) | 99, 249, 287, 296, 693, 1746 |
| Msp20I | TGGCCA | 2 cut(s) | 148, 1601 |
| MspCI | CTTAAG | 1 cut(s) | 248 |
| MspR9I | CCNGG | 1 cut(s) | 725 |
| MunI | CAATTG | 1 cut(s) | 1688 |
| Mva1269I | GAATGC | 2 cut(s) | 601, 1564 |
| MvaI | CCWGG | 1 cut(s) | 725 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 619, 1718 |
| NdeI | CATATG | 1 cut(s) | 686 |
| NdeII | GATC | 7 cut(s) | 169, 301, 569, 1067, 1161, 1402, 1684 |
| NlaIII | CATG | 4 cut(s) | 222, 737, 958, 1168 |
| NlaIV | GGNNCC | 3 cut(s) | 42, 320, 1771 |
| NmuCI | GTSAC | 3 cut(s) | 865, 1337, 1621 |
| NspI | RCATGY | 1 cut(s) | 958 |
| PceI | AGGCCT | 1 cut(s) | 1137 |
| PctI | GAATGC | 2 cut(s) | 601, 1564 |
| PdmI | GAANNNNTTC | 1 cut(s) | 995 |
| PfeI | GAWTC | 3 cut(s) | 163, 896, 1185 |
| PkrI | GCNGC | 2 cut(s) | 979, 1011 |
| PleI | GAGTC | 2 cut(s) | 661, 970 |
| PpsI | GAGTC | 2 cut(s) | 661, 970 |
| Ppu21I | YACGTR | 2 cut(s) | 137, 1035 |
| PpuMI | RGGWCCY | 3 cut(s) | 40, 319, 1769 |
| PshBI | ATTAAT | 1 cut(s) | 1746 |
| Psp124BI | GAGCTC | 1 cut(s) | 748 |
| Psp5II | RGGWCCY | 3 cut(s) | 40, 319, 1769 |
| Psp6I | CCWGG | 1 cut(s) | 723 |
| PspGI | CCWGG | 1 cut(s) | 723 |
| PspN4I | GGNNCC | 3 cut(s) | 42, 320, 1771 |
| PspPI | GGNCC | 3 cut(s) | 40, 319, 1769 |
| PspPPI | RGGWCCY | 3 cut(s) | 40, 319, 1769 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1447, 1479 |
| PsuI | RGATCY | 2 cut(s) | 301, 569 |
| RsaI | GTAC | 3 cut(s) | 755, 1037, 1434 |
| RsaNI | GTAC | 3 cut(s) | 754, 1036, 1433 |
| SacI | GAGCTC | 1 cut(s) | 748 |
| SaqAI | TTAA | 6 cut(s) | 99, 249, 287, 296, 693, 1746 |
| SatI | GCNGC | 2 cut(s) | 978, 1010 |
| Sau3AI | GATC | 7 cut(s) | 169, 301, 569, 1067, 1161, 1402, 1684 |
| Sau96I | GGNCC | 3 cut(s) | 40, 319, 1769 |
| SchI | GAGTC | 2 cut(s) | 661, 971 |
| ScrFI | CCNGG | 1 cut(s) | 725 |
| SduI | GDGCHC | 1 cut(s) | 748 |
| SfaNI | GCATC | 4 cut(s) | 173, 645, 928, 1364 |
| SfcI | CTRYAG | 2 cut(s) | 891, 1441 |
| SinI | GGWCC | 3 cut(s) | 40, 319, 1769 |
| SmlI | CTYRAG | 2 cut(s) | 248, 1283 |
| SmoI | CTYRAG | 2 cut(s) | 248, 1283 |
| SnaBI | TACGTA | 1 cut(s) | 1035 |
| SseBI | AGGCCT | 1 cut(s) | 1137 |
| SsiI | CCGC | 3 cut(s) | 230, 1367, 1461 |
| SspMI | CTAG | 5 cut(s) | 281, 729, 825, 1106, 1554 |
| SstI | GAGCTC | 1 cut(s) | 748 |
| StuI | AGGCCT | 1 cut(s) | 1137 |
| StyD4I | CCNGG | 1 cut(s) | 723 |
| StyI | CCWWGG | 3 cut(s) | 382, 739, 1647 |
| TaaI | ACNGT | 3 cut(s) | 839, 995, 1174 |
| TaiI | ACGT | 4 cut(s) | 139, 857, 1037, 1735 |
| TaqI | TCGA | 4 cut(s) | 347, 566, 1188, 1550 |
| TfiI | GAWTC | 3 cut(s) | 163, 896, 1185 |
| Tru1I | TTAA | 6 cut(s) | 99, 249, 287, 296, 693, 1746 |
| Tru9I | TTAA | 6 cut(s) | 99, 249, 287, 296, 693, 1746 |
| TscAI | CASTG | 1 cut(s) | 93 |
| TseFI | GTSAC | 3 cut(s) | 865, 1337, 1621 |
| TseI | GCWGC | 2 cut(s) | 977, 1009 |
| Tsp45I | GTSAC | 3 cut(s) | 865, 1337, 1621 |
| TspDTI | ATGAA | 4 cut(s) | 529, 572, 1230, 1329 |
| TspGWI | ACGGA | 1 cut(s) | 1195 |
| TspRI | CASTG | 1 cut(s) | 93 |
| Vha464I | CTTAAG | 1 cut(s) | 248 |
| VpaK11BI | GGWCC | 3 cut(s) | 40, 319, 1769 |
| VspI | ATTAAT | 1 cut(s) | 1746 |
| XapI | RAATTY | 4 cut(s) | 587, 983, 1015, 1628 |
| XbaI | TCTAGA | 1 cut(s) | 1105 |
| XceI | RCATGY | 1 cut(s) | 958 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 141, 809, 1781 |
| XmnI | GAANNNNTTC | 1 cut(s) | 995 |
| XspI | CTAG | 5 cut(s) | 281, 729, 825, 1106, 1554 |