Prupe.2G224000_v2.0.a1

Cyclic nucleotide-gated ion channel 1-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Forward (+)
25145278 .. 25149410
4133 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G224000.1

Sequence Viewer

Length: 2571 bp
ATGGCAACATCACCAAAAGTGGAGTCTTTCTTGCAAAACTGGAAGAAGATATTTGTAGCATCATGTCTATTTGCTGTTCTGCTGGATCCATTGTTTCTCTACATTCCTATGATGAAGGATGATATCAAGTGCATGATGTCTGACAGAAACTTGAAGATTGCCGCTCTTCTTTCAAGATCACTCACTGATCTTCTCTATATATTTGATATTATTTTTCAAATTTATACATCTGACAAGAAATTTTTTGTGCCAACAATAATTAAGACAATGTGGGGGTCATACAATATCCTAATTGACATTTTGTCTATTCTTCCGCTTCCACAAGTAGCAATTCTCATTATCTTTTCAAAAATGAGCGACTTGAGATCTTTGACGGCAATAAGGATGGTTATCATGAACCTTTTTGCTTTATTGCAATATGTGCCACGGGTTCTTCGCATCTACTTATCATGTAAAGAAATTAAAATGACTCCTAAAAAAGACACTGGAGTGACTGCCAAATGGGTTAAAGGTCTCTTGCATTTCTTTATGTACATCCTTTCTTGTCATGTACTTGGTGCCATATACTACTTTTTTGCTATTCAATGTATGGCCACTTGTTGGCATAATGCATGTCGCAAAGCAAATGGATGTGACACTAGTACTTTTGGATGTTATGATCACCACACAGATAGAAATATTACATTTCTAAATGATTTATGCCCTATAAGTCCAGTGAACACAACGCTCTTTGATTCTGGTATATATATTACAGTCCTTCAATCTGGTATAATGGGATCAACAAATTATTTTCAAAAGTTCTCAAATTGTTTTTGGTGGGGACTGCGAAATTTGAGTTCTCTTGGTTCAAATCTTCAGCCTAGCGTGGATGGATGGGAAAACCTCTTTGCAGCGTTCACCTCTATAATTGGATTGCTTTTATTATTATATCTCATTGGAAATTTGCAGACATACATGCAGTTGGGTACTCAAAGAACAGAGGCGCATAGACACAGGATGAACATGGAACAAAAGATGAAAGAGAAAGATAAAGAGACGGACTTGTGGTTATCTGCAAATTGCATCCCCAAAGGCTTGCATGAGGATATGAAGTTGAAGATCATGGAGAAGGTACAACAAGAAGTTGAAGAAAACAGGAATGCTGATTTGGACTACATCCTCTCTATTCTTCCCTTGGATCTTCAGTCATATATTAAAGATTGTACGCCTATGGCTAGGTTGAATCAAGTGCCCATGTTGCGAAACATGGATGAAGATGTGTTGAGAAGAATTTGTCCGTATCTTGAGCGCAGGGAGTTTGATGACAATTCTATCATTATTGAAAAGGGTGAACCACTTGATATGATGCTATTCATTGTGGACGGACTTGTATCCATTGAAACGAGAGATGGTTCTTCTTCTTCTAATAATAATTTGCAGCAACGACCTCGACGTGCAGGAAAAGTATGTGGAGAAGAACTTCTACTTTGGCCATTGTCGGTATCATATCCTGACAACGTAACCTTGGCAACCGAGTCTGCTAAGGCAATAGGTCATGTTGAAGCCCTTGTTCTCACAGCTAGAGACTTGCGTAGAGCGTTAACTTTTTATCAAATAAAAAAGGACTATTTGGTTGGGATGATGCGTAGAACATTTAGTGCAAAAGAACTTGAGATGGCAACAGACAACTACCATCCAAATAGAATCATTCGTCGTAAAGGGAACTATGCATCCTTTTACAAAGGGGTACTGCCAGATGATGATAAAACAGTGGTTGCGGTAAAGAAGTACACAACTATTTATCATCAATATGCAGCTATTGAGGCGGCTGTTGCTTCTCAGACCAACCACATAAATGTGGTGAGGTTCTTAGGTGCTTGTGTGGAACCACAGCCACAAGCACTGGTTTTTGAGTACATTCCCAATGGCACACTTTTTGAGCACATTCATAGAGAAGCAGCAGCAGGCAGCTTTGAAGGATCATCATCGTCACCAACTGCTCTACTTTCATTGGACTTACGACTCAAGATAGCGTCAGAAACAGCTGGAGCACTAGCTTACTTACACTCACTCACTCCGCCAATCATACACCTATTTTTGTCGACAAAACATATACTATTGGATGATCATTACACTGCAAAGTTGTCTGCCATTGGACAGTGGCAAATAACTTTTCGGGAATCAGATTATTTAAACCAAGGATACTTTGACCCTAATTTTGAATTATACTGTGCAGCAGAAAAGGGTGACGTCTATAGCTTTGGAGTTGTCCTGGCGGAGCTACTAACAAGTCAAAAGCCAGCTTCTCCTTACAGAGGGGAAGAGCCACCCCTGGCAACCTGTCTTCTATCCTCAATGGAAGAGGGTCGCTTGAATCAAATTCTGGATGGTAAAATAATATTCAATGAAGCAACTTCTGAGACGGCCAAAAAGGTGGCAGATCTGGCAAAAAGATGTTTAAGGTCAAAAAGGGAGGAAAGGCCTTCCATGGAGCAAGTAGCCGTGGAGCTTGAGGGATTGCGCAAATTTATGGCAGAGTATCAAAGGGGAGAACCCAGTTTCTCAAACAGCCCAACCTCTTTGCAACCGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling

Protein Analysis

857

Amino Acids

97.36

Weight (kDa)

7.0

Isoelectric Point (pI)

49.74

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000017)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07351 FvH4_1g11800 FvH4_1g11800 FvH4_1g11800 FvH4_1g11800 FvH4_1g11800 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_4g14360 FvH4_6g13561 FvH4_6g13562 FvH4_6g13580 FvH4_6g13590 FvH4_6g13590 FvH4_6g13590 FvH4_6g13731 FvH4_6g13770 FvH4_6g13800 FvH4_6g13800 FvH4_6g13860 FvH4_6g13870 FvH4_6g13870 FvH4_6g13870 FvH4_6g13870 FvH4_6g13870 FvH4_6g13890 FvH4_6g33801 FvH4_7g13020 FvH4_7g13270 FvH4_7g13270 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g14580 FvH4_7g14580 FvH4_7g14580 FvH4_7g14600 FvH4_7g14600 FvH4_7g20030 FvH4_7g20510 FvH4_7g20510 FvH4_7g20510 FvH4_7g20670 FvH4_7g20670 FvH4_7g20670 FvH4_7g20670 FvH4_7g20690 FvH4_7g20690 FvH4_7g31930 FvH4_7g31930 FvH4_7g31940 FvH4_7g31940
malus_domestica MD01G1115700.v1.1 MD01G1115800.v1.1 MD01G1116600.v1.1 MD01G1116700.v1.1 MD01G1117000.v1.1 MD01G1225000.v1.1 MD02G1077900.v1.1 MD02G1078000.v1.1 MD02G1078200.v1.1 MD02G1078400.v1.1 MD02G1084300.v1.1 MD04G1004700.v1.1 MD04G1123100.v1.1 MD04G1123200.v1.1 MD04G1128000.v1.1 MD04G1128400.v1.1 MD05G1299700.v1.1 MD05G1300000.v1.1 MD07G1184000.v1.1 MD07G1292300.v1.1 MD08G1214800.v1.1
prunus_persica Prupe.1G205100_v2.0.a1 Prupe.1G205100_v2.0.a1 Prupe.1G205200_v2.0.a1 Prupe.2G222300_v2.0.a1 Prupe.2G223300_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223600_v2.0.a1 Prupe.2G223600_v2.0.a1 Prupe.2G223600_v2.0.a1 Prupe.2G223700_v2.0.a1 Prupe.2G223700_v2.0.a1 Prupe.2G223700_v2.0.a1 Prupe.2G223700_v2.0.a1 Prupe.2G223800_v2.0.a1 Prupe.2G223900_v2.0.a1 Prupe.2G224000_v2.0.a1 Prupe.5G162000_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G291000_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G210400_v2.0.a1 Prupe.7G210600_v2.0.a1 Prupe.7G210700_v2.0.a1 Prupe.7G210800_v2.0.a1 Prupe.7G210900_v2.0.a1 Prupe.8G097600_v2.0.a1 Prupe.8G097800_v2.0.a1 Prupe.8G097800_v2.0.a1
pyrus_communis pycom01g14430 pycom01g14440 pycom01g23130 pycom01g23160 pycom01g23330 pycom02g06210 pycom02g06220 pycom02g06250 pycom02g06270 pycom02g06710 pycom03g05360 pycom03g05380 pycom04g11470 pycom04g11480 pycom04g11520 pycom04g11560 pycom04g11600 pycom04g11610 pycom04g11650 pycom04g11660 pycom04g11670 pycom05g27790 pycom07g17630 pycom08g20960 pycom126g00020 pycom126g00030
rosa_chinensis RchiOBHm_Chr1g0318251 RchiOBHm_Chr1g0318731 RchiOBHm_Chr1g0339101 RchiOBHm_Chr1g0339111 RchiOBHm_Chr1g0347151 RchiOBHm_Chr1g0347161 RchiOBHm_Chr1g0347221 RchiOBHm_Chr1g0352401 RchiOBHm_Chr1g0352441 RchiOBHm_Chr1g0352461 RchiOBHm_Chr1g0356131 RchiOBHm_Chr1g0363991 RchiOBHm_Chr1g0364791 RchiOBHm_Chr1g0364801 RchiOBHm_Chr1g0364811 RchiOBHm_Chr1g0364851 RchiOBHm_Chr1g0364951 RchiOBHm_Chr1g0370821 RchiOBHm_Chr1g0381221 RchiOBHm_Chr1g0381231 RchiOBHm_Chr1g0381261 RchiOBHm_Chr1g0381271 RchiOBHm_Chr1g0381341 RchiOBHm_Chr1g0381351 RchiOBHm_Chr1g0381391 RchiOBHm_Chr1g0381801 RchiOBHm_Chr1g0381821 RchiOBHm_Chr2g0093241 RchiOBHm_Chr2g0116391 RchiOBHm_Chr3g0466441 RchiOBHm_Chr3g0466631 RchiOBHm_Chr3g0466651 RchiOBHm_Chr3g0496921 RchiOBHm_Chr4g0400441 RchiOBHm_Chr4g0400501 RchiOBHm_Chr4g0400511 RchiOBHm_Chr4g0400691 RchiOBHm_Chr4g0400701 RchiOBHm_Chr4g0404331 RchiOBHm_Chr5g0052101 RchiOBHm_Chr5g0052111 RchiOBHm_Chr5g0052171 RchiOBHm_Chr5g0052181 RchiOBHm_Chr6g0264161 RchiOBHm_Chr6g0265551 RchiOBHm_Chr7g0213571 RchiOBHm_Chr7g0213581
rosa_laevigata RLG00000002796 RLG00000003261 RLG00000007935 RLG00000007936 RLG00000009187 RLG00000014179 RLG00000016381 RLG00000018265 RLG00000024558 RLG00000024574 RLG00000026232 RLG00000026234 RLG00000026236 RLG00000026237 RLG00000027459 RLG00000027461 RLG00000027463 RLG00000027530 RLG00000028103 RLG00000028304 RLG00000028333 RLG00000029214 RLG00000029848 RLG00000029951 RLG00000030115 RLG00000030552 RLG00000033668 RLG00000034840 RLG00000034841 RLG00000034842 RLG00000035830
rosa_multiflora Rmu_sc0000654.1_g000004 Rmu_sc0000675.1_g000025 Rmu_sc0001075.1_g000002 Rmu_sc0001726.1_g000004 Rmu_sc0001772.1_g000061 Rmu_sc0001772.1_g000065 Rmu_sc0002067.1_g000002 Rmu_sc0002183.1_g000001 Rmu_sc0002183.1_g000006 Rmu_sc0002244.1_g000003 Rmu_sc0002313.1_g000004 Rmu_sc0002319.1_g000004 Rmu_sc0002539.1_g000085 Rmu_sc0002636.1_g000004 Rmu_sc0003229.1_g000007 Rmu_sc0003313.1_g000020 Rmu_sc0003546.1_g000007 Rmu_sc0003724.1_g000015 Rmu_sc0003936.1_g000029 Rmu_sc0004191.1_g000067 Rmu_sc0004525.1_g000012 Rmu_sc0005122.1_g000009 Rmu_sc0005255.1_g000040 Rmu_sc0005338.1_g000016 Rmu_sc0005584.1_g000008 Rmu_sc0006460.1_g000013 Rmu_sc0006872.1_g000011 Rmu_sc0006872.1_g000015 Rmu_sc0006872.1_g000016 Rmu_sc0006952.1_g000013 Rmu_sc0007342.1_g000005 Rmu_sc0007342.1_g000006 Rmu_sc0008418.1_g000003 Rmu_sc0008418.1_g000006 Rmu_sc0008636.1_g000007 Rmu_sc0008636.1_g000008 Rmu_sc0009205.1_g000014 Rmu_sc0009365.1_g000014 Rmu_sc0009917.1_g000002 Rmu_sc0019289.1_g000003 Rmu_ssc0000098.1_g000011 Rmu_ssc0000098.1_g000012 Rmu_ssc0000167.1_g000018 Rmu_ssc0000167.1_g000024 Rmu_ssc0000326.1_g000015
rosa_roxburghii Rroxscaffold_166G00440780 Rroxscaffold_176G00431500 Rroxscaffold_1G00015080 Rroxscaffold_1G00027880 Rroxscaffold_1G00027890 Rroxscaffold_1G00027920 Rroxscaffold_2G00127250 Rroxscaffold_2G00148380 Rroxscaffold_3G00219450 Rroxscaffold_3G00232170 Rroxscaffold_3G00232210 Rroxscaffold_3G00242230 Rroxscaffold_3G00242240 Rroxscaffold_3G00244790 Rroxscaffold_3G00245790 Rroxscaffold_4G00278400 Rroxscaffold_4G00278430 Rroxscaffold_4G00278670 Rroxscaffold_4G00278680 Rroxscaffold_4G00278690 Rroxscaffold_4G00278700 Rroxscaffold_4G00278720 Rroxscaffold_4G00291690 Rroxscaffold_4G00292070 Rroxscaffold_4G00292090 Rroxscaffold_4G00292770 Rroxscaffold_4G00302240 Rroxscaffold_4G00302860 Rroxscaffold_4G00311320 Rroxscaffold_4G00311330 Rroxscaffold_4G00320570 Rroxscaffold_4G00322050 Rroxscaffold_4G00329480 Rroxscaffold_4G00329730 Rroxscaffold_5G00345500 Rroxscaffold_5G00345510 Rroxscaffold_5G00360830 Rroxscaffold_5G00360840 Rroxscaffold_6G00393450 Rroxscaffold_6G00404030 Rroxscaffold_6G00414220 Rroxscaffold_6G00414230 Rroxscaffold_6G00414280 Rroxscaffold_6G00414290 Rroxscaffold_6G00414350 Rroxscaffold_6G00414470 Rroxscaffold_7G00202570 Rroxscaffold_7G00203460 Rroxscaffold_7G00203470
rosa_rugosa Rorug01G0020500 Rorug01G0020600 Rorug01G0020700 Rorug01G0143700.1 Rorug01G0225700 Rorug01G0228500 Rorug01G0228600 Rorug01G0228600 Rorug01G0228700 Rorug01G0228800 Rorug01G0228800 Rorug01G0229000 Rorug01G0229300 Rorug01G0229400 Rorug01G0229600 Rorug01G0229700 Rorug01G0232200 Rorug01G0232600 Rorug01G0232600 Rorug01G0311900 Rorug01G0311900 Rorug01G0318400 Rorug01G0318500 Rorug01G0318500 Rorug01G0318500 Rorug01G0427900 Rorug01G0427900 Rorug01G0428000 Rorug01G0428200 Rorug01G0428300 Rorug01G0428400 Rorug01G0431500 Rorug01G0431600 Rorug01G0431600 Rorug02G0033800 Rorug02G0206300 Rorug03G0081900 Rorug03G0083200 Rorug03G0083200 Rorug03G0083300 Rorug04G0025100 Rorug04G0025100 Rorug04G0025200 Rorug04G0025300 Rorug04G0058600 Rorug04G0058700 Rorug04G0058800 Rorug04G0098400 Rorug04G0098500 Rorug05G0274500 Rorug05G0274600 Rorug05G0274800 Rorug06G0008500 Rorug06G0009100 Rorug06G0018000
rosa_samantha Rh1AG031700 Rh1AG036100 Rh1AG089800 Rh1AG239800 Rh1AG239900 Rh1AG242000 Rh1AG242300 Rh1AG245600 Rh1AG262600 Rh1AG319700 Rh1AG319800 Rh1AG319900 Rh1AG327200 Rh1AG451100 Rh1AG451200 Rh1AG451300 Rh1AG451600 Rh1AG451700 Rh1BG027200 Rh1BG071600 Rh1BG090700 Rh1BG211000 Rh1BG213000 Rh1BG213500 Rh1BG282800 Rh1BG288400 Rh1BG408100 Rh1BG408200 Rh1BG408400 Rh1BG408700 Rh1CG026300 Rh1CG028300 Rh1CG224100 Rh1CG226000 Rh1CG226100 Rh1CG229300 Rh1CG229400 Rh1CG245900 Rh1CG299200 Rh1CG299400 Rh1CG299500 Rh1CG303300 Rh1CG305100 Rh1CG422500 Rh1CG422600 Rh1CG422700 Rh1CG422800 Rh1CG422900 Rh1CG423100 Rh1CG423300 Rh1CG423400 Rh1CG426300 Rh1CG426600 Rh1DG239300 Rh1DG239600 Rh1DG258300 Rh1DG314200 Rh1DG314300 Rh1DG314400 Rh1DG320000 Rh1DG439200 Rh1DG439400 Rh1DG439500 Rh1DG439700 Rh1DG440000 Rh1DG443800 Rh2AG261800 Rh2BG080900 Rh2CG083300 Rh2DG078900 Rh2DG270000 Rh2DG270100 Rh3AG128400 Rh3AG130100 Rh3AG130500 Rh3AG332500 Rh3AG332600 Rh3AG332800 Rh3BG149700 Rh3BG151500 Rh3CG151400 Rh3CG354500 Rh3CG366800 Rh3DG150500 Rh3DG152200 Rh4AG101400 Rh4AG102900 Rh4AG148300 Rh4AG148600 Rh4BG098000 Rh4CG111100 Rh4CG111300 Rh4CG155100 Rh4DG094800 Rh5AG213600 Rh5AG346900 Rh5AG347000 Rh5BG357500 Rh5BG357700 Rh5BG485400 Rh5CG383100 Rh5CG383200 Rh5CG383300 Rh5CG509900 Rh5DG373000 Rh5DG373200 Rh6BG054300 Rh6BG126300 Rh6CG125100 Rh6CG185300 Rh6DG177000 Rh7AG276100 Rh7AG276200 Rh7BG230500 Rh7BG270500 Rh7BG364000 Rh7CG250100 Rh7CG295200 Rh7CG295300 Rh7DG389700
rosa_wichuraiana Rw0G001190 Rw0G010680 Rw0G013360 Rw0G014310 Rw0G014890 Rw0G020310 Rw0G021350 Rw0G022510 Rw1G003360 Rw1G004330 Rw1G006930 Rw1G008310 Rw1G021090 Rw1G021150 Rw1G021210 Rw1G023200 Rw1G023210 Rw1G028340 Rw1G028350 Rw1G028990 Rw1G032510 Rw1G039370 Rw1G039400 Rw1G039410 Rw1G039420 Rw1G039430 Rw2G006700 Rw2G020550 Rw2G020580 Rw3G012130 Rw3G012300 Rw3G012310 Rw3G028220 Rw3G029230 Rw5G021600 Rw5G032790 Rw6G011240 Rw7G027670 Rw7G032780

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 2232
Acc16I TGCGCA 1 cut(s) 2501
AccB1I GGYRCC 1 cut(s) 557
AccB7I CCANNNNNTGG 1 cut(s) 600
AccBSI CCGCTC 1 cut(s) 164
AccI GTMKAC 1 cut(s) 2081
AciI CCGC 6 cut(s) 162, 314, 1757, 1805, 2057, 2255
AclWI GGATC 5 cut(s) 80, 93, 784, 1185, 1966
AcoI YGGCCR 3 cut(s) 591, 1469, 2403
AcsI RAATTY 7 cut(s) 219, 239, 829, 940, 1269, 2358, 2504
AcuI CTGAAG 2 cut(s) 839, 1166
AcyI GRCGYC 1 cut(s) 2229
AfaI GTAC 9 cut(s) 533, 552, 643, 967, 1113, 1204, 1728, 1769, 1895
AfiI CCNNNNNNNGG 2 cut(s) 600, 2294
AhdI GACNNNNNGTC 1 cut(s) 301
AhlI ACTAGT 1 cut(s) 638
AjiI CACGTC 1 cut(s) 1433
AjnI CCWGG 2 cut(s) 2250, 2310
AjuI GAANNNNNNNTTGG 2 cut(s) 1130, 1162
AleI CACNNNNGTG 1 cut(s) 488
AloI GAACNNNNNNTCC 2 cut(s) 1694, 1726
AluBI AGCT 9 cut(s) 1559, 1796, 1950, 2024, 2036, 2238, 2260, 2282, 2488
AluI AGCT 9 cut(s) 1559, 1796, 1950, 2024, 2036, 2238, 2260, 2282, 2488
Alw21I GWGCWC 2 cut(s) 1923, 2032
Alw26I GTCTC 4 cut(s) 518, 1028, 1557, 2393
AlwI GGATC 5 cut(s) 80, 93, 784, 1185, 1966
AoxI GGCC 4 cut(s) 591, 1469, 2403, 2459
ApeKI GCWGC 7 cut(s) 890, 1417, 1793, 1937, 1940, 1947, 2213
ApoI RAATTY 7 cut(s) 219, 239, 829, 940, 1269, 2358, 2504
ArsI GACNNNNNNTTYG 4 cut(s) 8, 40, 2180, 2212
Asp700I GAANNNNTTC 1 cut(s) 1458
AspLEI GCGC 3 cut(s) 985, 1290, 2502
AsuHPI GGTGA 7 cut(s) 3, 653, 889, 1340, 1852, 1962, 2237
BaeGI GKGCMC 1 cut(s) 1233
BalI TGGCCA 2 cut(s) 593, 1471
BamHI GGATCC 1 cut(s) 85
BanI GGYRCC 1 cut(s) 557
BarI GAAGNNNNNNTAC 2 cut(s) 1446, 1478
BbsI GAAGAC 1 cut(s) 2315
Bbv12I GWGCWC 2 cut(s) 1923, 2032
BbvI GCAGC 7 cut(s) 902, 1429, 1805, 1949, 1952, 1959, 2225
BccI CCATC 7 cut(s) 379, 863, 867, 1382, 1648, 1680, 2360
BceAI ACGGC 3 cut(s) 390, 2418, 2465
BcgI CGANNNNNNTGC 2 cut(s) 1409, 1443
BciT130I CCWGG 2 cut(s) 2252, 2312
BciVI GTATCC 2 cut(s) 1381, 2174
BclI TGATCA 2 cut(s) 658, 2104
BcoDI GTCTC 4 cut(s) 518, 1028, 1557, 2393
BcuI ACTAGT 1 cut(s) 638
BfaI CTAG 5 cut(s) 639, 861, 1215, 1560, 2033
BfmI CTRYAG 1 cut(s) 2233
BfuI GTATCC 2 cut(s) 1381, 2174
BglII AGATCT 2 cut(s) 365, 2419
BisI GCNGC 9 cut(s) 162, 891, 1418, 1794, 1806, 1938, 1941, 1948, 2214
BlsI GCNGC 9 cut(s) 163, 892, 1419, 1795, 1807, 1939, 1942, 1949, 2215
BmcAI AGTACT 1 cut(s) 643
Bme1390I CCNGG 2 cut(s) 2252, 2312
BmeRI GACNNNNNGTC 1 cut(s) 301
BmgBI CACGTC 1 cut(s) 1433
BmiI GGNNCC 3 cut(s) 87, 559, 1866
BmrFI CCNGG 2 cut(s) 2252, 2312
BmrI ACTGGG 1 cut(s) 2529
BmsI GCATC 6 cut(s) 68, 447, 1071, 1335, 1611, 1718
BmuI ACTGGG 1 cut(s) 2529
BpiI GAAGAC 1 cut(s) 2315
BpmI CTGGAG 2 cut(s) 507, 2046
Bpu10I CCTNAGC 1 cut(s) 1521
BpuEI CTTGAG 5 cut(s) 382, 1304, 1670, 1988, 2510
BsaBI GATNNNNATC 2 cut(s) 389, 1963
BsaHI GRCGYC 1 cut(s) 2229
BsaI GGTCTC 1 cut(s) 518
BsaJI CCNNGG 7 cut(s) 425, 1173, 1503, 2176, 2310, 2466, 2481
Bsc4I CCNNNNNNNGG 2 cut(s) 600, 2294
Bse1I ACTGG 5 cut(s) 44, 490, 713, 1887, 2535
Bse8I GATNNNNATC 2 cut(s) 389, 1963
BseBI CCWGG 2 cut(s) 2252, 2312
BseDI CCNNGG 7 cut(s) 425, 1173, 1503, 2176, 2310, 2466, 2481
BseJI GATNNNNATC 2 cut(s) 389, 1963
BseLI CCNNNNNNNGG 2 cut(s) 600, 2294
BseMII CTCAG 2 cut(s) 1832, 2388
BseNI ACTGG 5 cut(s) 44, 490, 713, 1887, 2535
BseSI GKGCMC 1 cut(s) 1233
BseXI GCAGC 7 cut(s) 902, 1429, 1805, 1949, 1952, 1959, 2225
BsgI GTGCAG 2 cut(s) 1455, 2232
BshFI GGCC 4 cut(s) 593, 1471, 2405, 2461
BshNI GGYRCC 1 cut(s) 557
BsiHKAI GWGCWC 2 cut(s) 1923, 2032
BslFI GGGAC 1 cut(s) 834
BslI CCNNNNNNNGG 2 cut(s) 600, 2294
BsmAI GTCTC 4 cut(s) 518, 1028, 1557, 2393
BsmBI CGTCTC 2 cut(s) 1028, 2393
BsmFI GGGAC 1 cut(s) 834
BsmI GAATGC 1 cut(s) 1144
BsnI GGCC 4 cut(s) 593, 1471, 2405, 2461
Bso31I GGTCTC 1 cut(s) 518
Bsp1286I GDGCHC 3 cut(s) 1233, 1923, 2032
Bsp1407I TGTACA 1 cut(s) 531
Bsp19I CCATGG 1 cut(s) 2466
BspACI CCGC 6 cut(s) 162, 314, 1757, 1805, 2057, 2255
BspANI GGCC 4 cut(s) 593, 1471, 2405, 2461
BspCNI CTCAG 2 cut(s) 1831, 2389
BspHI TCATGA 1 cut(s) 393
BspLI GGNNCC 3 cut(s) 87, 559, 1866
BspPI GGATC 5 cut(s) 80, 93, 784, 1185, 1966
BspQI GCTCTTC 2 cut(s) 171, 2295
BspT107I GGYRCC 1 cut(s) 557
BspTNI GGTCTC 1 cut(s) 518
BsrBI CCGCTC 1 cut(s) 164
BsrGI TGTACA 1 cut(s) 531
BsrI ACTGG 5 cut(s) 44, 490, 713, 1887, 2535
BssECI CCNNGG 7 cut(s) 425, 1173, 1503, 2176, 2310, 2466, 2481
BssNI GRCGYC 1 cut(s) 2229
BssT1I CCWWGG 4 cut(s) 1173, 1503, 2176, 2466
Bst2UI CCWGG 2 cut(s) 2252, 2312
Bst4CI ACNGT 5 cut(s) 754, 1750, 2139, 2210, 2568
Bst6I CTCTTC 3 cut(s) 171, 2295, 2334
BstACI GRCGYC 1 cut(s) 2229
BstAPI GCANNNNNTGC 1 cut(s) 421
BstAUI TGTACA 1 cut(s) 531
BstC8I GCNNGC 3 cut(s) 1076, 1945, 2280
BstDEI CTNAG 4 cut(s) 1521, 1818, 1849, 2397
BstDSI CCRYGG 3 cut(s) 425, 2466, 2481
BstENI CCTNNNNNAGG 1 cut(s) 2292
BstHHI GCGC 3 cut(s) 985, 1290, 2502
BstMAI GTCTC 4 cut(s) 518, 1028, 1557, 2393
BstMWI GCNNNNNNNGC 5 cut(s) 421, 1237, 1802, 1811, 2423
BstNI CCWGG 2 cut(s) 2252, 2312
BstNSI RCATGY 2 cut(s) 615, 958
BstSCI CCNGG 2 cut(s) 2250, 2310
BstSFI CTRYAG 1 cut(s) 2233
BstSLI GKGCMC 1 cut(s) 1233
BstV1I GCAGC 7 cut(s) 902, 1429, 1805, 1949, 1952, 1959, 2225
BstV2I GAAGAC 1 cut(s) 2315
BstX2I RGATCY 4 cut(s) 85, 365, 1177, 2419
BstXI CCANNNNNNTGG 1 cut(s) 2413
BstYI RGATCY 4 cut(s) 85, 365, 1177, 2419
BsuI GTATCC 2 cut(s) 1381, 2174
BsuRI GGCC 4 cut(s) 593, 1471, 2405, 2461
BtgI CCRYGG 3 cut(s) 425, 2466, 2481
BtrI CACGTC 1 cut(s) 1433
BtsI GCAGTG 1 cut(s) 2112
BtsIMutI CAGTG 7 cut(s) 183, 483, 720, 1755, 1880, 2112, 2144
Cac8I GCNNGC 3 cut(s) 1076, 1945, 2280
CciI TCATGA 1 cut(s) 393
CfoI GCGC 3 cut(s) 985, 1290, 2502
CseI GACGC 1 cut(s) 2001
Csp6I GTAC 9 cut(s) 532, 551, 642, 966, 1112, 1203, 1727, 1768, 1894
CviQI GTAC 9 cut(s) 532, 551, 642, 966, 1112, 1203, 1727, 1768, 1894
DdeI CTNAG 4 cut(s) 1521, 1818, 1849, 2397
DraI TTTAAA 1 cut(s) 2172
DriI GACNNNNNGTC 1 cut(s) 301
EaeI YGGCCR 3 cut(s) 591, 1469, 2403
Eam1104I CTCTTC 3 cut(s) 171, 2295, 2334
Eam1105I GACNNNNNGTC 1 cut(s) 301
EarI CTCTTC 3 cut(s) 171, 2295, 2334
EciI GGCGGA 2 cut(s) 2046, 2270
Eco130I CCWWGG 4 cut(s) 1173, 1503, 2176, 2466
Eco147I AGGCCT 1 cut(s) 2461
Eco31I GGTCTC 1 cut(s) 518
Eco32I GATATC 1 cut(s) 124
Eco57I CTGAAG 2 cut(s) 839, 1166
EcoNI CCTNNNNNAGG 1 cut(s) 2292
EcoRII CCWGG 2 cut(s) 2250, 2310
EcoRV GATATC 1 cut(s) 124
EcoT14I CCWWGG 4 cut(s) 1173, 1503, 2176, 2466
EcoT22I ATGCAT 2 cut(s) 613, 1711
ErhI CCWWGG 4 cut(s) 1173, 1503, 2176, 2466
Esp3I CGTCTC 2 cut(s) 1028, 2393
FaqI GGGAC 1 cut(s) 834
FbaI TGATCA 2 cut(s) 658, 2104
FblI GTMKAC 1 cut(s) 2081
Fnu4HI GCNGC 9 cut(s) 162, 891, 1418, 1794, 1806, 1938, 1941, 1948, 2214
Fsp4HI GCNGC 9 cut(s) 162, 891, 1418, 1794, 1806, 1938, 1941, 1948, 2214
FspBI CTAG 5 cut(s) 639, 861, 1215, 1560, 2033
FspI TGCGCA 1 cut(s) 2501
GlaI GCGC 3 cut(s) 984, 1289, 2501
GluI GCNGC 9 cut(s) 162, 891, 1418, 1794, 1806, 1938, 1941, 1948, 2214
GsuI CTGGAG 2 cut(s) 507, 2046
HaeIII GGCC 4 cut(s) 593, 1471, 2405, 2461
HgaI GACGC 1 cut(s) 2001
HhaI GCGC 3 cut(s) 985, 1290, 2502
Hin1I GRCGYC 1 cut(s) 2229
Hin6I GCGC 3 cut(s) 983, 1288, 2500
HinP1I GCGC 3 cut(s) 983, 1288, 2500
HincII GTYRAC 2 cut(s) 1581, 2082
HindII GTYRAC 2 cut(s) 1581, 2082
HinfI GANTC 9 cut(s) 23, 469, 734, 1222, 1514, 1683, 2001, 2159, 2353
HpaI GTTAAC 1 cut(s) 1581
HphI GGTGA 7 cut(s) 3, 653, 889, 1340, 1852, 1962, 2237
Hpy166II GTNNAC 7 cut(s) 718, 897, 1331, 1360, 1581, 1770, 2082
Hpy188I TCNGA 6 cut(s) 142, 232, 1821, 2017, 2164, 2398
Hpy188III TCNNGA 7 cut(s) 174, 394, 1283, 1490, 2005, 2156, 2363
Hpy8I GTNNAC 7 cut(s) 718, 897, 1331, 1360, 1581, 1770, 2082
Hpy99I CGWCG 2 cut(s) 1434, 1695
HpyAV CCTTC 5 cut(s) 109, 767, 1102, 1949, 2472
HpyCH4III ACNGT 5 cut(s) 754, 1750, 2139, 2210, 2568
HpyCH4IV ACGT 3 cut(s) 1432, 1497, 2229
HpyF10VI GCNNNNNNNGC 5 cut(s) 421, 1237, 1802, 1811, 2423
HpyF3I CTNAG 4 cut(s) 1521, 1818, 1849, 2397
HpySE526I ACGT 3 cut(s) 1432, 1497, 2229
Hsp92I GRCGYC 1 cut(s) 2229
HspAI GCGC 3 cut(s) 983, 1288, 2500
Ksp22I TGATCA 2 cut(s) 658, 2104
KspAI GTTAAC 1 cut(s) 1581
LguI GCTCTTC 2 cut(s) 171, 2295
LmnI GCTCC 4 cut(s) 2027, 2257, 2470, 2485
Lsp1109I GCAGC 7 cut(s) 902, 1429, 1805, 1949, 1952, 1959, 2225
LweI GCATC 6 cut(s) 68, 447, 1071, 1335, 1611, 1718
MaeI CTAG 5 cut(s) 639, 861, 1215, 1560, 2033
MaeII ACGT 3 cut(s) 1432, 1497, 2229
MaeIII GTNAC 5 cut(s) 490, 632, 1498, 1968, 2225
MbiI CCGCTC 1 cut(s) 164
MflI RGATCY 4 cut(s) 85, 365, 1177, 2419
MhlI GDGCHC 3 cut(s) 1233, 1923, 2032
MlsI TGGCCA 2 cut(s) 593, 1471
MluNI TGGCCA 2 cut(s) 593, 1471
MlyI GAGTC 4 cut(s) 32, 463, 1523, 1995
Mox20I TGGCCA 2 cut(s) 593, 1471
Mph1103I ATGCAT 2 cut(s) 613, 1711
MroXI GAANNNNTTC 1 cut(s) 1458
MscI TGGCCA 2 cut(s) 593, 1471
MseI TTAA 7 cut(s) 261, 462, 507, 1194, 1580, 2171, 2438
MslI CAYNNNNRTG 5 cut(s) 107, 488, 1788, 1833, 1835
Msp20I TGGCCA 2 cut(s) 593, 1471
MspA1I CMGCKG 1 cut(s) 2024
MspR9I CCNGG 2 cut(s) 2252, 2312
Mva1269I GAATGC 1 cut(s) 1144
MvaI CCWGG 2 cut(s) 2252, 2312
MwoI GCNNNNNNNGC 5 cut(s) 421, 1237, 1802, 1811, 2423
NcoI CCATGG 1 cut(s) 2466
NlaIV GGNNCC 3 cut(s) 87, 559, 1866
NmuCI GTSAC 4 cut(s) 490, 632, 1968, 2225
NsbI TGCGCA 1 cut(s) 2501
NsiI ATGCAT 2 cut(s) 613, 1711
NspI RCATGY 2 cut(s) 615, 958
OliI CACNNNNGTG 1 cut(s) 488
PagI TCATGA 1 cut(s) 393
PceI AGGCCT 1 cut(s) 2461
PciSI GCTCTTC 2 cut(s) 171, 2295
PcsI WCGNNNNNNNCGW 1 cut(s) 1429
PctI GAATGC 1 cut(s) 1144
PdmI GAANNNNTTC 1 cut(s) 1458
PfeI GAWTC 5 cut(s) 734, 1222, 1683, 2159, 2353
PflMI CCANNNNNTGG 1 cut(s) 600
PkrI GCNGC 9 cut(s) 163, 892, 1419, 1795, 1807, 1939, 1942, 1949, 2215
PleI GAGTC 4 cut(s) 31, 463, 1522, 1995
PpsI GAGTC 4 cut(s) 31, 463, 1522, 1995
Psp6I CCWGG 2 cut(s) 2250, 2310
PspGI CCWGG 2 cut(s) 2250, 2310
PspN4I GGNNCC 3 cut(s) 87, 559, 1866
PsuI RGATCY 4 cut(s) 85, 365, 1177, 2419
PvuII CAGCTG 1 cut(s) 2024
RsaI GTAC 9 cut(s) 533, 552, 643, 967, 1113, 1204, 1728, 1769, 1895
RsaNI GTAC 9 cut(s) 532, 551, 642, 966, 1112, 1203, 1727, 1768, 1894
RseI CAYNNNNRTG 5 cut(s) 107, 488, 1788, 1833, 1835
SalI GTCGAC 1 cut(s) 2080
SapI GCTCTTC 2 cut(s) 171, 2295
SaqAI TTAA 7 cut(s) 261, 462, 507, 1194, 1580, 2171, 2438
SatI GCNGC 9 cut(s) 162, 891, 1418, 1794, 1806, 1938, 1941, 1948, 2214
ScaI AGTACT 1 cut(s) 643
SchI GAGTC 4 cut(s) 32, 463, 1523, 1995
ScrFI CCNGG 2 cut(s) 2252, 2312
SduI GDGCHC 3 cut(s) 1233, 1923, 2032
SfaNI GCATC 6 cut(s) 68, 447, 1071, 1335, 1611, 1718
SfcI CTRYAG 1 cut(s) 2233
SmiMI CAYNNNNRTG 5 cut(s) 107, 488, 1788, 1833, 1835
SmlI CTYRAG 5 cut(s) 361, 1283, 1649, 2003, 2489
SmoI CTYRAG 5 cut(s) 361, 1283, 1649, 2003, 2489
SpeI ACTAGT 1 cut(s) 638
SseBI AGGCCT 1 cut(s) 2461
SsiI CCGC 6 cut(s) 162, 314, 1757, 1805, 2057, 2255
SspI AATATT 2 cut(s) 679, 2379
SspMI CTAG 5 cut(s) 639, 861, 1215, 1560, 2033
StuI AGGCCT 1 cut(s) 2461
StyD4I CCNGG 2 cut(s) 2250, 2310
StyI CCWWGG 4 cut(s) 1173, 1503, 2176, 2466
TaaI ACNGT 5 cut(s) 754, 1750, 2139, 2210, 2568
TaiI ACGT 3 cut(s) 1435, 1500, 2232
TaqI TCGA 2 cut(s) 1429, 2081
TatI WGTACW 5 cut(s) 531, 550, 641, 1767, 1893
TauI GCSGC 2 cut(s) 164, 1808
TfiI GAWTC 5 cut(s) 734, 1222, 1683, 2159, 2353
Tru1I TTAA 7 cut(s) 261, 462, 507, 1194, 1580, 2171, 2438
Tru9I TTAA 7 cut(s) 261, 462, 507, 1194, 1580, 2171, 2438
TscAI CASTG 7 cut(s) 190, 490, 720, 1755, 1887, 2119, 2144
TseFI GTSAC 4 cut(s) 490, 632, 1968, 2225
TseI GCWGC 7 cut(s) 890, 1417, 1793, 1937, 1940, 1947, 2213
Tsp45I GTSAC 4 cut(s) 490, 632, 1968, 2225
TspGWI ACGGA 3 cut(s) 1052, 1266, 1377
TspRI CASTG 7 cut(s) 190, 490, 720, 1755, 1887, 2119, 2144
Van91I CCANNNNNTGG 1 cut(s) 600
XagI CCTNNNNNAGG 1 cut(s) 2292
XapI RAATTY 7 cut(s) 219, 239, 829, 940, 1269, 2358, 2504
XceI RCATGY 2 cut(s) 615, 958
XmiI GTMKAC 1 cut(s) 2081
XmnI GAANNNNTTC 1 cut(s) 1458
XspI CTAG 5 cut(s) 639, 861, 1215, 1560, 2033
ZraI GACGTC 1 cut(s) 2230
ZrmI AGTACT 1 cut(s) 643
Zsp2I ATGCAT 2 cut(s) 613, 1711
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.