Cyclic nucleotide-gated ion channel 1-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| cNMP_binding | PF00027 | 501 - 593 | 4.4e-08 | Cyclic nucleotide-binding domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 1147 |
| AccBSI | CCGCTC | 2 cut(s) | 133, 1599 |
| AccII | CGCG | 1 cut(s) | 1615 |
| AciI | CCGC | 5 cut(s) | 35, 133, 242, 466, 1597 |
| AclI | AACGTT | 1 cut(s) | 764 |
| AclWI | GGATC | 5 cut(s) | 314, 327, 478, 583, 1487 |
| AcoI | YGGCCR | 1 cut(s) | 141 |
| AcsI | RAATTY | 2 cut(s) | 109, 1027 |
| AcuI | CTGAAG | 2 cut(s) | 23, 941 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 373, 1071, 1534, 1660, 1703 |
| AflIII | ACRYGT | 1 cut(s) | 1138 |
| AgsI | TTSAA | 6 cut(s) | 120, 128, 724, 1332, 1345, 1471 |
| AjnI | CCWGG | 4 cut(s) | 103, 1441, 1566, 1749 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1187, 1219 |
| AluBI | AGCT | 9 cut(s) | 43, 398, 488, 570, 1163, 1376, 1518, 1648, 1659 |
| AluI | AGCT | 9 cut(s) | 43, 398, 488, 570, 1163, 1376, 1518, 1648, 1659 |
| Alw21I | GWGCWC | 2 cut(s) | 572, 694 |
| Alw26I | GTCTC | 7 cut(s) | 282, 350, 1406, 1623, 1782, 1820, 1857 |
| AlwI | GGATC | 5 cut(s) | 314, 327, 478, 583, 1487 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1670 |
| AoxI | GGCC | 3 cut(s) | 141, 1018, 1719 |
| ApeKI | GCWGC | 5 cut(s) | 395, 920, 1664, 1754, 1820 |
| ApoI | RAATTY | 2 cut(s) | 109, 1027 |
| AseI | ATTAAT | 1 cut(s) | 1871 |
| AspS9I | GGNCC | 3 cut(s) | 1018, 1179, 1720 |
| AsuHPI | GGTGA | 5 cut(s) | 86, 258, 1555, 1652, 1804 |
| AvaII | GGWCC | 1 cut(s) | 1179 |
| AxyI | CCTNAGG | 2 cut(s) | 477, 1509 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 668, 701, 969, 1002 |
| BalI | TGGCCA | 1 cut(s) | 143 |
| BamHI | GGATCC | 1 cut(s) | 319 |
| BanII | GRGCYC | 1 cut(s) | 572 |
| BauI | CACGAG | 1 cut(s) | 1012 |
| BbsI | GAAGAC | 2 cut(s) | 1305, 1320 |
| Bbv12I | GWGCWC | 2 cut(s) | 572, 694 |
| BbvI | GCAGC | 5 cut(s) | 407, 932, 1676, 1741, 1832 |
| BccI | CCATC | 4 cut(s) | 64, 1065, 1397, 1443 |
| BceAI | ACGGC | 1 cut(s) | 1768 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 1662, 1696, 1724, 1758 |
| BciT130I | CCWGG | 4 cut(s) | 105, 1443, 1568, 1751 |
| BciVI | GTATCC | 1 cut(s) | 702 |
| BcoDI | GTCTC | 7 cut(s) | 282, 350, 1406, 1623, 1782, 1820, 1857 |
| BfaI | CTAG | 3 cut(s) | 297, 758, 1373 |
| BfmI | CTRYAG | 1 cut(s) | 646 |
| BfuAI | ACCTGC | 1 cut(s) | 1147 |
| BfuI | GTATCC | 1 cut(s) | 702 |
| BglII | AGATCT | 3 cut(s) | 421, 1306, 1476 |
| BisI | GCNGC | 5 cut(s) | 396, 921, 1665, 1755, 1821 |
| BlsI | GCNGC | 5 cut(s) | 397, 922, 1666, 1756, 1822 |
| BmcAI | AGTACT | 4 cut(s) | 63, 847, 1428, 1711 |
| Bme1390I | CCNGG | 4 cut(s) | 105, 1443, 1568, 1751 |
| Bme18I | GGWCC | 1 cut(s) | 1179 |
| BmgT120I | GGNCC | 3 cut(s) | 1018, 1179, 1720 |
| BmiI | GGNNCC | 5 cut(s) | 321, 1019, 1181, 1209, 1539 |
| BmrFI | CCNGG | 4 cut(s) | 105, 1443, 1568, 1751 |
| BmsI | GCATC | 3 cut(s) | 504, 824, 847 |
| BpiI | GAAGAC | 2 cut(s) | 1305, 1320 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1416, 1448 |
| BpmI | CTGGAG | 2 cut(s) | 86, 1337 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1655 |
| BpuEI | CTTGAG | 2 cut(s) | 1565, 1640 |
| BsaI | GGTCTC | 1 cut(s) | 1820 |
| BsaJI | CCNNGG | 5 cut(s) | 1132, 1441, 1566, 1567, 1830 |
| BsaWI | WCCGGW | 1 cut(s) | 268 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 158, 188, 347, 377, 1310, 1340 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 373, 1071, 1534, 1660, 1703 |
| Bse1I | ACTGG | 5 cut(s) | 69, 321, 747, 1059, 1496 |
| Bse21I | CCTNAGG | 2 cut(s) | 477, 1509 |
| Bse3DI | GCAATG | 3 cut(s) | 881, 1572, 1810 |
| BseBI | CCWGG | 4 cut(s) | 105, 1443, 1568, 1751 |
| BseDI | CCNNGG | 5 cut(s) | 1132, 1441, 1566, 1567, 1830 |
| BseGI | GGATG | 4 cut(s) | 277, 738, 839, 1076 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 373, 1071, 1534, 1660, 1703 |
| BseMI | GCAATG | 3 cut(s) | 881, 1572, 1810 |
| BseMII | CTCAG | 2 cut(s) | 1716, 1793 |
| BseNI | ACTGG | 5 cut(s) | 69, 321, 747, 1059, 1496 |
| BseRI | GAGGAG | 2 cut(s) | 368, 580 |
| BseXI | GCAGC | 5 cut(s) | 407, 932, 1676, 1741, 1832 |
| BseYI | CCCAGC | 3 cut(s) | 238, 488, 1659 |
| BsgI | GTGCAG | 1 cut(s) | 1163 |
| Bsh1236I | CGCG | 1 cut(s) | 1615 |
| BshFI | GGCC | 3 cut(s) | 143, 1020, 1721 |
| BsiHKAI | GWGCWC | 2 cut(s) | 572, 694 |
| BsiSI | CCGG | 1 cut(s) | 269 |
| BslFI | GGGAC | 2 cut(s) | 946, 1165 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 373, 1071, 1534, 1660, 1703 |
| BsmAI | GTCTC | 7 cut(s) | 282, 350, 1406, 1623, 1782, 1820, 1857 |
| BsmFI | GGGAC | 2 cut(s) | 946, 1165 |
| BsmI | GAATGC | 1 cut(s) | 922 |
| BsnI | GGCC | 3 cut(s) | 143, 1020, 1721 |
| Bso31I | GGTCTC | 1 cut(s) | 1820 |
| Bsp1286I | GDGCHC | 2 cut(s) | 572, 694 |
| Bsp1407I | TGTACA | 3 cut(s) | 198, 221, 333 |
| Bsp143I | GATC | 8 cut(s) | 319, 421, 470, 575, 1306, 1476, 1492, 1500 |
| BspACI | CCGC | 5 cut(s) | 35, 133, 242, 466, 1597 |
| BspANI | GGCC | 3 cut(s) | 143, 1020, 1721 |
| BspCNI | CTCAG | 2 cut(s) | 1715, 1792 |
| BspFNI | CGCG | 1 cut(s) | 1615 |
| BspLI | GGNNCC | 5 cut(s) | 321, 1019, 1181, 1209, 1539 |
| BspMI | ACCTGC | 1 cut(s) | 1147 |
| BspPI | GGATC | 5 cut(s) | 314, 327, 478, 583, 1487 |
| BspQI | GCTCTTC | 3 cut(s) | 123, 960, 1638 |
| BspTNI | GGTCTC | 1 cut(s) | 1820 |
| BsrBI | CCGCTC | 2 cut(s) | 133, 1599 |
| BsrDI | GCAATG | 3 cut(s) | 881, 1572, 1810 |
| BsrGI | TGTACA | 3 cut(s) | 198, 221, 333 |
| BsrI | ACTGG | 5 cut(s) | 69, 321, 747, 1059, 1496 |
| BssECI | CCNNGG | 5 cut(s) | 1132, 1441, 1566, 1567, 1830 |
| BssMI | GATC | 8 cut(s) | 319, 421, 470, 575, 1306, 1476, 1492, 1500 |
| BssSI | CACGAG | 1 cut(s) | 1012 |
| BssT1I | CCWWGG | 2 cut(s) | 1132, 1830 |
| Bst2BI | CACGAG | 1 cut(s) | 1012 |
| Bst2UI | CCWGG | 4 cut(s) | 105, 1443, 1568, 1751 |
| Bst4CI | ACNGT | 4 cut(s) | 226, 803, 1640, 1714 |
| Bst6I | CTCTTC | 4 cut(s) | 123, 960, 1409, 1638 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1670 |
| BstAUI | TGTACA | 3 cut(s) | 198, 221, 333 |
| BstC8I | GCNNGC | 4 cut(s) | 35, 817, 898, 1165 |
| BstDEI | CTNAG | 8 cut(s) | 360, 450, 477, 544, 1509, 1655, 1702, 1779 |
| BstEII | GGTNACC | 1 cut(s) | 1810 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1701 |
| BstF5I | GGATG | 4 cut(s) | 277, 738, 839, 1076 |
| BstFNI | CGCG | 1 cut(s) | 1615 |
| BstKTI | GATC | 8 cut(s) | 322, 424, 473, 578, 1309, 1479, 1495, 1503 |
| BstMAI | GTCTC | 7 cut(s) | 282, 350, 1406, 1623, 1782, 1820, 1857 |
| BstMBI | GATC | 8 cut(s) | 319, 421, 470, 575, 1306, 1476, 1492, 1500 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 11, 1670, 1751 |
| BstNI | CCWGG | 4 cut(s) | 105, 1443, 1568, 1751 |
| BstNSI | RCATGY | 2 cut(s) | 190, 1142 |
| BstPI | GGTNACC | 1 cut(s) | 1810 |
| BstSCI | CCNGG | 4 cut(s) | 103, 1441, 1566, 1749 |
| BstSFI | CTRYAG | 1 cut(s) | 646 |
| BstUI | CGCG | 1 cut(s) | 1615 |
| BstV1I | GCAGC | 5 cut(s) | 407, 932, 1676, 1741, 1832 |
| BstV2I | GAAGAC | 2 cut(s) | 1305, 1320 |
| BstX2I | RGATCY | 6 cut(s) | 319, 421, 470, 575, 1306, 1476 |
| BstYI | RGATCY | 6 cut(s) | 319, 421, 470, 575, 1306, 1476 |
| Bsu36I | CCTNAGG | 2 cut(s) | 477, 1509 |
| BsuI | GTATCC | 1 cut(s) | 702 |
| BsuRI | GGCC | 3 cut(s) | 143, 1020, 1721 |
| BtgZI | GCGATG | 2 cut(s) | 481, 1421 |
| BtsCI | GGATG | 4 cut(s) | 277, 738, 839, 1076 |
| BtsIMutI | CAGTG | 3 cut(s) | 231, 1503, 1590 |
| BveI | ACCTGC | 1 cut(s) | 1147 |
| Cac8I | GCNNGC | 4 cut(s) | 35, 817, 898, 1165 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1670 |
| Cfr13I | GGNCC | 3 cut(s) | 1018, 1179, 1720 |
| CseI | GACGC | 1 cut(s) | 1604 |
| CviAII | CATG | 9 cut(s) | 92, 187, 370, 965, 1139, 1225, 1349, 1453, 1817 |
| DdeI | CTNAG | 8 cut(s) | 360, 450, 477, 544, 1509, 1655, 1702, 1779 |
| DpnI | GATC | 8 cut(s) | 321, 423, 472, 577, 1308, 1478, 1494, 1502 |
| DpnII | GATC | 8 cut(s) | 319, 421, 470, 575, 1306, 1476, 1492, 1500 |
| EaeI | YGGCCR | 1 cut(s) | 141 |
| Eam1104I | CTCTTC | 4 cut(s) | 123, 960, 1409, 1638 |
| EarI | CTCTTC | 4 cut(s) | 123, 960, 1409, 1638 |
| Ecl136II | GAGCTC | 1 cut(s) | 570 |
| Eco130I | CCWWGG | 2 cut(s) | 1132, 1830 |
| Eco24I | GRGCYC | 1 cut(s) | 572 |
| Eco31I | GGTCTC | 1 cut(s) | 1820 |
| Eco47I | GGWCC | 1 cut(s) | 1179 |
| Eco53kI | GAGCTC | 1 cut(s) | 570 |
| Eco57I | CTGAAG | 2 cut(s) | 23, 941 |
| Eco81I | CCTNAGG | 2 cut(s) | 477, 1509 |
| Eco91I | GGTNACC | 1 cut(s) | 1810 |
| EcoICRI | GAGCTC | 1 cut(s) | 570 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1701 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1018, 1179 |
| EcoO65I | GGTNACC | 1 cut(s) | 1810 |
| EcoRII | CCWGG | 4 cut(s) | 103, 1441, 1566, 1749 |
| EcoT14I | CCWWGG | 2 cut(s) | 1132, 1830 |
| EcoT38I | GRGCYC | 1 cut(s) | 572 |
| ErhI | CCWWGG | 2 cut(s) | 1132, 1830 |
| FaeI | CATG | 9 cut(s) | 95, 190, 373, 968, 1142, 1228, 1352, 1456, 1820 |
| FaqI | GGGAC | 2 cut(s) | 946, 1165 |
| FatI | CATG | 9 cut(s) | 91, 186, 369, 964, 1138, 1224, 1348, 1452, 1816 |
| FauI | CCCGC | 2 cut(s) | 42, 459 |
| Fnu4HI | GCNGC | 5 cut(s) | 396, 921, 1665, 1755, 1821 |
| FokI | GGATG | 4 cut(s) | 284, 725, 846, 1083 |
| FriOI | GRGCYC | 1 cut(s) | 572 |
| Fsp4HI | GCNGC | 5 cut(s) | 396, 921, 1665, 1755, 1821 |
| FspBI | CTAG | 3 cut(s) | 297, 758, 1373 |
| GluI | GCNGC | 5 cut(s) | 396, 921, 1665, 1755, 1821 |
| GsaI | CCCAGC | 3 cut(s) | 242, 492, 1663 |
| GsuI | CTGGAG | 2 cut(s) | 86, 1337 |
| HaeIII | GGCC | 3 cut(s) | 143, 1020, 1721 |
| HapII | CCGG | 1 cut(s) | 269 |
| HgaI | GACGC | 1 cut(s) | 1604 |
| Hin1II | CATG | 9 cut(s) | 95, 190, 373, 968, 1142, 1228, 1352, 1456, 1820 |
| HincII | GTYRAC | 1 cut(s) | 978 |
| HindII | GTYRAC | 1 cut(s) | 978 |
| HinfI | GANTC | 7 cut(s) | 50, 161, 275, 411, 661, 974, 1220 |
| HpaII | CCGG | 1 cut(s) | 269 |
| HphI | GGTGA | 5 cut(s) | 86, 258, 1555, 1652, 1804 |
| Hpy166II | GTNNAC | 2 cut(s) | 978, 1587 |
| Hpy188I | TCNGA | 7 cut(s) | 166, 558, 872, 1174, 1234, 1394, 1690 |
| Hpy188III | TCNNGA | 4 cut(s) | 573, 1316, 1544, 1619 |
| Hpy8I | GTNNAC | 2 cut(s) | 978, 1587 |
| Hpy99I | CGWCG | 1 cut(s) | 1789 |
| HpyAV | CCTTC | 3 cut(s) | 563, 1351, 1465 |
| HpyCH4III | ACNGT | 4 cut(s) | 226, 803, 1640, 1714 |
| HpyCH4IV | ACGT | 4 cut(s) | 507, 764, 984, 1882 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 11, 1670, 1751 |
| HpyF3I | CTNAG | 8 cut(s) | 360, 450, 477, 544, 1509, 1655, 1702, 1779 |
| HpySE526I | ACGT | 4 cut(s) | 507, 764, 984, 1882 |
| Hsp92II | CATG | 9 cut(s) | 95, 190, 373, 968, 1142, 1228, 1352, 1456, 1820 |
| Kzo9I | GATC | 8 cut(s) | 319, 421, 470, 575, 1306, 1476, 1492, 1500 |
| LguI | GCTCTTC | 3 cut(s) | 123, 960, 1638 |
| LmnI | GCTCC | 4 cut(s) | 492, 567, 697, 1537 |
| Lsp1109I | GCAGC | 5 cut(s) | 407, 932, 1676, 1741, 1832 |
| LweI | GCATC | 3 cut(s) | 504, 824, 847 |
| MaeI | CTAG | 3 cut(s) | 297, 758, 1373 |
| MaeII | ACGT | 4 cut(s) | 507, 764, 984, 1882 |
| MaeIII | GTNAC | 6 cut(s) | 246, 312, 415, 824, 877, 1810 |
| MalI | GATC | 8 cut(s) | 321, 423, 472, 577, 1308, 1478, 1494, 1502 |
| MbiI | CCGCTC | 2 cut(s) | 133, 1599 |
| MboI | GATC | 8 cut(s) | 319, 421, 470, 575, 1306, 1476, 1492, 1500 |
| MfeI | CAATTG | 1 cut(s) | 1856 |
| MflI | RGATCY | 6 cut(s) | 319, 421, 470, 575, 1306, 1476 |
| MhlI | GDGCHC | 2 cut(s) | 572, 694 |
| MlsI | TGGCCA | 1 cut(s) | 143 |
| MluCI | AATT | 7 cut(s) | 28, 109, 281, 1027, 1332, 1379, 1856 |
| MluNI | TGGCCA | 1 cut(s) | 143 |
| MlyI | GAGTC | 2 cut(s) | 284, 983 |
| MmeI | TCCRAC | 4 cut(s) | 354, 811, 1071, 1713 |
| Mox20I | TGGCCA | 1 cut(s) | 143 |
| MscI | TGGCCA | 1 cut(s) | 143 |
| MseI | TTAA | 8 cut(s) | 45, 150, 207, 456, 666, 1382, 1418, 1871 |
| MslI | CAYNNNNRTG | 3 cut(s) | 308, 855, 1728 |
| Msp20I | TGGCCA | 1 cut(s) | 143 |
| MspA1I | CMGCKG | 1 cut(s) | 242 |
| MspI | CCGG | 1 cut(s) | 269 |
| MspR9I | CCNGG | 4 cut(s) | 105, 1443, 1568, 1751 |
| MunI | CAATTG | 1 cut(s) | 1856 |
| Mva1269I | GAATGC | 1 cut(s) | 922 |
| MvaI | CCWGG | 4 cut(s) | 105, 1443, 1568, 1751 |
| MvnI | CGCG | 1 cut(s) | 1615 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 11, 1670, 1751 |
| NdeII | GATC | 8 cut(s) | 319, 421, 470, 575, 1306, 1476, 1492, 1500 |
| NlaIII | CATG | 9 cut(s) | 95, 190, 373, 968, 1142, 1228, 1352, 1456, 1820 |
| NlaIV | GGNNCC | 5 cut(s) | 321, 1019, 1181, 1209, 1539 |
| NmuCI | GTSAC | 3 cut(s) | 415, 824, 1810 |
| NspI | RCATGY | 2 cut(s) | 190, 1142 |
| PasI | CCCWGGG | 1 cut(s) | 1567 |
| PciI | ACATGT | 1 cut(s) | 1138 |
| PciSI | GCTCTTC | 3 cut(s) | 123, 960, 1638 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 504 |
| PctI | GAATGC | 1 cut(s) | 922 |
| PfeI | GAWTC | 5 cut(s) | 50, 161, 411, 661, 1220 |
| PflFI | GACNNNGTC | 2 cut(s) | 509, 1398 |
| PkrI | GCNGC | 5 cut(s) | 397, 922, 1666, 1756, 1822 |
| PleI | GAGTC | 2 cut(s) | 283, 982 |
| PpsI | GAGTC | 2 cut(s) | 283, 982 |
| PpuMI | RGGWCCY | 1 cut(s) | 1179 |
| PscI | ACATGT | 1 cut(s) | 1138 |
| PshBI | ATTAAT | 1 cut(s) | 1871 |
| Psp124BI | GAGCTC | 1 cut(s) | 572 |
| Psp1406I | AACGTT | 1 cut(s) | 764 |
| Psp5II | RGGWCCY | 1 cut(s) | 1179 |
| Psp6I | CCWGG | 4 cut(s) | 103, 1441, 1566, 1749 |
| PspEI | GGTNACC | 1 cut(s) | 1810 |
| PspFI | CCCAGC | 3 cut(s) | 238, 488, 1659 |
| PspGI | CCWGG | 4 cut(s) | 103, 1441, 1566, 1749 |
| PspN4I | GGNNCC | 5 cut(s) | 321, 1019, 1181, 1209, 1539 |
| PspPI | GGNCC | 3 cut(s) | 1018, 1179, 1720 |
| PspPPI | RGGWCCY | 1 cut(s) | 1179 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1670 |
| PsuI | RGATCY | 6 cut(s) | 319, 421, 470, 575, 1306, 1476 |
| PsyI | GACNNNGTC | 2 cut(s) | 509, 1398 |
| RseI | CAYNNNNRTG | 3 cut(s) | 308, 855, 1728 |
| SacI | GAGCTC | 1 cut(s) | 572 |
| SapI | GCTCTTC | 3 cut(s) | 123, 960, 1638 |
| SaqAI | TTAA | 8 cut(s) | 45, 150, 207, 456, 666, 1382, 1418, 1871 |
| SatI | GCNGC | 5 cut(s) | 396, 921, 1665, 1755, 1821 |
| Sau3AI | GATC | 8 cut(s) | 319, 421, 470, 575, 1306, 1476, 1492, 1500 |
| Sau96I | GGNCC | 3 cut(s) | 1018, 1179, 1720 |
| ScaI | AGTACT | 4 cut(s) | 63, 847, 1428, 1711 |
| SchI | GAGTC | 2 cut(s) | 284, 983 |
| ScrFI | CCNGG | 4 cut(s) | 105, 1443, 1568, 1751 |
| SduI | GDGCHC | 2 cut(s) | 572, 694 |
| SfaNI | GCATC | 3 cut(s) | 504, 824, 847 |
| SfcI | CTRYAG | 1 cut(s) | 646 |
| SinI | GGWCC | 1 cut(s) | 1179 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 308, 855, 1728 |
| SmlI | CTYRAG | 2 cut(s) | 1580, 1619 |
| SmoI | CTYRAG | 2 cut(s) | 1580, 1619 |
| Sse9I | AATT | 7 cut(s) | 28, 109, 281, 1027, 1332, 1379, 1856 |
| SsiI | CCGC | 5 cut(s) | 35, 133, 242, 466, 1597 |
| SspI | AATATT | 2 cut(s) | 727, 1796 |
| SspMI | CTAG | 3 cut(s) | 297, 758, 1373 |
| SstI | GAGCTC | 1 cut(s) | 572 |
| StyD4I | CCNGG | 4 cut(s) | 103, 1441, 1566, 1749 |
| StyI | CCWWGG | 2 cut(s) | 1132, 1830 |
| TaaI | ACNGT | 4 cut(s) | 226, 803, 1640, 1714 |
| TaiI | ACGT | 4 cut(s) | 510, 767, 987, 1885 |
| TaqI | TCGA | 5 cut(s) | 113, 183, 686, 1734, 1787 |
| TasI | AATT | 7 cut(s) | 28, 109, 281, 1027, 1332, 1379, 1856 |
| TatI | WGTACW | 9 cut(s) | 61, 198, 221, 333, 754, 845, 1426, 1584, 1709 |
| TfiI | GAWTC | 5 cut(s) | 50, 161, 411, 661, 1220 |
| Tru1I | TTAA | 8 cut(s) | 45, 150, 207, 456, 666, 1382, 1418, 1871 |
| Tru9I | TTAA | 8 cut(s) | 45, 150, 207, 456, 666, 1382, 1418, 1871 |
| TscAI | CASTG | 3 cut(s) | 231, 1503, 1597 |
| TseFI | GTSAC | 3 cut(s) | 415, 824, 1810 |
| TseI | GCWGC | 5 cut(s) | 395, 920, 1664, 1754, 1820 |
| Tsp45I | GTSAC | 3 cut(s) | 415, 824, 1810 |
| TspDTI | ATGAA | 7 cut(s) | 277, 292, 452, 605, 1365, 1469, 1549 |
| TspRI | CASTG | 3 cut(s) | 231, 1503, 1597 |
| Tth111I | GACNNNGTC | 2 cut(s) | 509, 1398 |
| VpaK11BI | GGWCC | 1 cut(s) | 1179 |
| VspI | ATTAAT | 1 cut(s) | 1871 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1701 |
| XapI | RAATTY | 2 cut(s) | 109, 1027 |
| XceI | RCATGY | 2 cut(s) | 190, 1142 |
| XspI | CTAG | 3 cut(s) | 297, 758, 1373 |
| ZrmI | AGTACT | 4 cut(s) | 63, 847, 1428, 1711 |