FvH4_7g31930

Cyclic nucleotide-gated ion channel 1-like

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
Physical Location & Seq
Reverse (-)
23023302 .. 23026274
2973 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g31930.t1

Sequence Viewer

Length: 2046 bp
ATGGCCAACCCTGAAGTAGCTGTAAATGTAGAGCACTTGGAAGAAGAGAAAACTCAGAGATCGGTTGTTGATGAACATAGCGAGTTAGAGACTACTGCAACGGCAGAATCTGTCCCAAAAGATGGAGGAGATACAAAAGAAGCTAGAAGCTGCAGGTTATCCTTCAATACAATTTTCAATCGAAATGGGAACTTCCTTCCTATGTGGAACAACGTATTTGTAGTATCTTGTGTGTTTACTGTCTCCTTTGATCCTTTGTTCTTCTACATTCCGATCATTAACGAGAAGAAGAAGTGTCTATATTTTGACACAAGGTTGAAGACCGTAGCCCTCGTCTTACGGTTACTCACAGATCACTTCTACATTGCGGACATTATTATGCGAATTTTGACCAGTATACGTCAAACCAAGTTATCAAAGGCTTCTGGGGTGATGAAAGCACAATCGGAATCTCCTGATTTGAAAGGGAAGACATCAGTTGGTGATGTTTTTGAAATAGCTAAGAGGGCTTGGGCGAAAACTAATAGATCATACGTCCTGATTGACATTTTAGCTATTCTTCCCATACCCCAGGTGGCAATGTTCATTTTCTTTTCGAAAATGGAGGGTCCGGGATGGTCAAAAGAAAGAAGGCTTTTCGACACTCTTATTATATTCCAATTTGTCCCACGAGTTCTTCCCGTTTACTTATTGTGCAGAGAACGCGAGAGAACTCTTAACAAAGCAAGCATGTGGACTAAAGGTGTTTTCAATTTCTTCCTGCACATCCTTGCAAGTCATGTACTCGGAGCTCTTTGGTACTTCTTTGCCATTCAACGAGAGGTGGATTGTTGGCATATGCATTCTGGTTGGCAACACCACAATAGATGCCAACTTAGTACCTATAGTTCTAGCGCAGGACAAGATGGATTGAGAAATATCCCATTGTTAGACATAAAATGTCCGATAAACCTGCCGGAAGAAAAGAAAGGAAAGCCCTTTGATTTTGGTATATTTGCTGATGCACTTGACTCCGGCCTAGTGCAGACTACTGATTTTCCTGAAAAATTCTTGAATTGTTTCTGGTGGGGGCGGCAAAATCTGAGCTCTCTGGGTCAAAACCTCCATACAAGCACCTATGCATGGGAAAACCTCTTTGCTGTGTTTATTTCGATCATAGGCTTGCTATTGTTTATATATCTCATCGGAAATTTGCAGACATACTTGCAGTTTGCGACTACAAGATCAGAGAAGCTCAGACGAAAGATGAAAACGAAAAATTTAGAGGTTGATTTGTGGCTATCAAGAAAAGGCCTGCCTAGCAATTTGAAGGTAGTGATAATGCAAATCATACAACAAAAACTTGAACAGAACAAAGATGTTCAAGTTGAGGACACCCTTTCTGTTCTTCCTTCAGCACATAGTAAATATATCAGGCGCTATCTTAGTTTGGCTACACTCAAGAAAGTGCCAATGCTTCAAACTATGGTGGTAAGAATGCTAAAAGCAATCTGTGAACACCTTACGCCGGTGGACCATCCAGAGGACAGTTACATTATCCGAGAGGGGAAGCAACTCCATCAGATGATTTTCATCACACATGGTACTGTACAGACCTACAAGACCAATGGTAAAGGTGGAAAAATTGGTTCCAAGTTTCTTGAGAAAGGGGACTACTATGGAGCAGAAGAACTTCTCAAATGGGCATCCAATTTCAGCGGTCACCAGGACTTACCAATCTCAACGAGAATGGTTAAGCCTGTCACTAAAGTTGAAGCATTTTCACTGAGTAAGGACGACTTGAAGAGTGTAGCCATCAAGTACTGGTGGAATTTCACCAAGAACAAGGATCCGAAGGATTTCGACCAGTCTGTGTTGGAGGAGTTTGCAGTATCTTCCATAGAAAAAGAAATCCGTCGCCGCAGGCAAGTGAAGAAGAAGCATACAATAAGGTCTCTTCATAAGTTGGATACTCAGGGTAGTGCTAGCCAGAAGTTGCAGAAGGTTATCAGTAGGGTCATGAAGGATCAGTTGCCTTCACCTGTTGGTGCTCTAGATGGCAGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

682

Amino Acids

78.3

Weight (kDa)

9.44

Isoelectric Point (pI)

40.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ion_trans PF00520 68 - 409 3.9e-10 Ion transport protein
cNMP_binding PF00027 507 - 596 2e-06 Cyclic nucleotide-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000017)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07351 FvH4_1g11800 FvH4_1g11800 FvH4_1g11800 FvH4_1g11800 FvH4_1g11800 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_4g14360 FvH4_6g13561 FvH4_6g13562 FvH4_6g13580 FvH4_6g13590 FvH4_6g13590 FvH4_6g13590 FvH4_6g13731 FvH4_6g13770 FvH4_6g13800 FvH4_6g13800 FvH4_6g13860 FvH4_6g13870 FvH4_6g13870 FvH4_6g13870 FvH4_6g13870 FvH4_6g13870 FvH4_6g13890 FvH4_6g33801 FvH4_7g13020 FvH4_7g13270 FvH4_7g13270 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g14580 FvH4_7g14580 FvH4_7g14580 FvH4_7g14600 FvH4_7g14600 FvH4_7g20030 FvH4_7g20510 FvH4_7g20510 FvH4_7g20510 FvH4_7g20670 FvH4_7g20670 FvH4_7g20670 FvH4_7g20670 FvH4_7g20690 FvH4_7g20690 FvH4_7g31930 FvH4_7g31930 FvH4_7g31940 FvH4_7g31940
malus_domestica MD01G1115700.v1.1 MD01G1115800.v1.1 MD01G1116600.v1.1 MD01G1116700.v1.1 MD01G1117000.v1.1 MD01G1225000.v1.1 MD02G1077900.v1.1 MD02G1078000.v1.1 MD02G1078200.v1.1 MD02G1078400.v1.1 MD02G1084300.v1.1 MD04G1004700.v1.1 MD04G1123100.v1.1 MD04G1123200.v1.1 MD04G1128000.v1.1 MD04G1128400.v1.1 MD05G1299700.v1.1 MD05G1300000.v1.1 MD07G1184000.v1.1 MD07G1292300.v1.1 MD08G1214800.v1.1
prunus_persica Prupe.1G205100_v2.0.a1 Prupe.1G205100_v2.0.a1 Prupe.1G205200_v2.0.a1 Prupe.2G222300_v2.0.a1 Prupe.2G223300_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223600_v2.0.a1 Prupe.2G223600_v2.0.a1 Prupe.2G223600_v2.0.a1 Prupe.2G223700_v2.0.a1 Prupe.2G223700_v2.0.a1 Prupe.2G223700_v2.0.a1 Prupe.2G223700_v2.0.a1 Prupe.2G223800_v2.0.a1 Prupe.2G223900_v2.0.a1 Prupe.2G224000_v2.0.a1 Prupe.5G162000_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G291000_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G210400_v2.0.a1 Prupe.7G210600_v2.0.a1 Prupe.7G210700_v2.0.a1 Prupe.7G210800_v2.0.a1 Prupe.7G210900_v2.0.a1 Prupe.8G097600_v2.0.a1 Prupe.8G097800_v2.0.a1 Prupe.8G097800_v2.0.a1
pyrus_communis pycom01g14430 pycom01g14440 pycom01g23130 pycom01g23160 pycom01g23330 pycom02g06210 pycom02g06220 pycom02g06250 pycom02g06270 pycom02g06710 pycom03g05360 pycom03g05380 pycom04g11470 pycom04g11480 pycom04g11520 pycom04g11560 pycom04g11600 pycom04g11610 pycom04g11650 pycom04g11660 pycom04g11670 pycom05g27790 pycom07g17630 pycom08g20960 pycom126g00020 pycom126g00030
rosa_chinensis RchiOBHm_Chr1g0318251 RchiOBHm_Chr1g0318731 RchiOBHm_Chr1g0339101 RchiOBHm_Chr1g0339111 RchiOBHm_Chr1g0347151 RchiOBHm_Chr1g0347161 RchiOBHm_Chr1g0347221 RchiOBHm_Chr1g0352401 RchiOBHm_Chr1g0352441 RchiOBHm_Chr1g0352461 RchiOBHm_Chr1g0356131 RchiOBHm_Chr1g0363991 RchiOBHm_Chr1g0364791 RchiOBHm_Chr1g0364801 RchiOBHm_Chr1g0364811 RchiOBHm_Chr1g0364851 RchiOBHm_Chr1g0364951 RchiOBHm_Chr1g0370821 RchiOBHm_Chr1g0381221 RchiOBHm_Chr1g0381231 RchiOBHm_Chr1g0381261 RchiOBHm_Chr1g0381271 RchiOBHm_Chr1g0381341 RchiOBHm_Chr1g0381351 RchiOBHm_Chr1g0381391 RchiOBHm_Chr1g0381801 RchiOBHm_Chr1g0381821 RchiOBHm_Chr2g0093241 RchiOBHm_Chr2g0116391 RchiOBHm_Chr3g0466441 RchiOBHm_Chr3g0466631 RchiOBHm_Chr3g0466651 RchiOBHm_Chr3g0496921 RchiOBHm_Chr4g0400441 RchiOBHm_Chr4g0400501 RchiOBHm_Chr4g0400511 RchiOBHm_Chr4g0400691 RchiOBHm_Chr4g0400701 RchiOBHm_Chr4g0404331 RchiOBHm_Chr5g0052101 RchiOBHm_Chr5g0052111 RchiOBHm_Chr5g0052171 RchiOBHm_Chr5g0052181 RchiOBHm_Chr6g0264161 RchiOBHm_Chr6g0265551 RchiOBHm_Chr7g0213571 RchiOBHm_Chr7g0213581
rosa_laevigata RLG00000002796 RLG00000003261 RLG00000007935 RLG00000007936 RLG00000009187 RLG00000014179 RLG00000016381 RLG00000018265 RLG00000024558 RLG00000024574 RLG00000026232 RLG00000026234 RLG00000026236 RLG00000026237 RLG00000027459 RLG00000027461 RLG00000027463 RLG00000027530 RLG00000028103 RLG00000028304 RLG00000028333 RLG00000029214 RLG00000029848 RLG00000029951 RLG00000030115 RLG00000030552 RLG00000033668 RLG00000034840 RLG00000034841 RLG00000034842 RLG00000035830
rosa_multiflora Rmu_sc0000654.1_g000004 Rmu_sc0000675.1_g000025 Rmu_sc0001075.1_g000002 Rmu_sc0001726.1_g000004 Rmu_sc0001772.1_g000061 Rmu_sc0001772.1_g000065 Rmu_sc0002067.1_g000002 Rmu_sc0002183.1_g000001 Rmu_sc0002183.1_g000006 Rmu_sc0002244.1_g000003 Rmu_sc0002313.1_g000004 Rmu_sc0002319.1_g000004 Rmu_sc0002539.1_g000085 Rmu_sc0002636.1_g000004 Rmu_sc0003229.1_g000007 Rmu_sc0003313.1_g000020 Rmu_sc0003546.1_g000007 Rmu_sc0003724.1_g000015 Rmu_sc0003936.1_g000029 Rmu_sc0004191.1_g000067 Rmu_sc0004525.1_g000012 Rmu_sc0005122.1_g000009 Rmu_sc0005255.1_g000040 Rmu_sc0005338.1_g000016 Rmu_sc0005584.1_g000008 Rmu_sc0006460.1_g000013 Rmu_sc0006872.1_g000011 Rmu_sc0006872.1_g000015 Rmu_sc0006872.1_g000016 Rmu_sc0006952.1_g000013 Rmu_sc0007342.1_g000005 Rmu_sc0007342.1_g000006 Rmu_sc0008418.1_g000003 Rmu_sc0008418.1_g000006 Rmu_sc0008636.1_g000007 Rmu_sc0008636.1_g000008 Rmu_sc0009205.1_g000014 Rmu_sc0009365.1_g000014 Rmu_sc0009917.1_g000002 Rmu_sc0019289.1_g000003 Rmu_ssc0000098.1_g000011 Rmu_ssc0000098.1_g000012 Rmu_ssc0000167.1_g000018 Rmu_ssc0000167.1_g000024 Rmu_ssc0000326.1_g000015
rosa_roxburghii Rroxscaffold_166G00440780 Rroxscaffold_176G00431500 Rroxscaffold_1G00015080 Rroxscaffold_1G00027880 Rroxscaffold_1G00027890 Rroxscaffold_1G00027920 Rroxscaffold_2G00127250 Rroxscaffold_2G00148380 Rroxscaffold_3G00219450 Rroxscaffold_3G00232170 Rroxscaffold_3G00232210 Rroxscaffold_3G00242230 Rroxscaffold_3G00242240 Rroxscaffold_3G00244790 Rroxscaffold_3G00245790 Rroxscaffold_4G00278400 Rroxscaffold_4G00278430 Rroxscaffold_4G00278670 Rroxscaffold_4G00278680 Rroxscaffold_4G00278690 Rroxscaffold_4G00278700 Rroxscaffold_4G00278720 Rroxscaffold_4G00291690 Rroxscaffold_4G00292070 Rroxscaffold_4G00292090 Rroxscaffold_4G00292770 Rroxscaffold_4G00302240 Rroxscaffold_4G00302860 Rroxscaffold_4G00311320 Rroxscaffold_4G00311330 Rroxscaffold_4G00320570 Rroxscaffold_4G00322050 Rroxscaffold_4G00329480 Rroxscaffold_4G00329730 Rroxscaffold_5G00345500 Rroxscaffold_5G00345510 Rroxscaffold_5G00360830 Rroxscaffold_5G00360840 Rroxscaffold_6G00393450 Rroxscaffold_6G00404030 Rroxscaffold_6G00414220 Rroxscaffold_6G00414230 Rroxscaffold_6G00414280 Rroxscaffold_6G00414290 Rroxscaffold_6G00414350 Rroxscaffold_6G00414470 Rroxscaffold_7G00202570 Rroxscaffold_7G00203460 Rroxscaffold_7G00203470
rosa_rugosa Rorug01G0020500 Rorug01G0020600 Rorug01G0020700 Rorug01G0143700.1 Rorug01G0225700 Rorug01G0228500 Rorug01G0228600 Rorug01G0228600 Rorug01G0228700 Rorug01G0228800 Rorug01G0228800 Rorug01G0229000 Rorug01G0229300 Rorug01G0229400 Rorug01G0229600 Rorug01G0229700 Rorug01G0232200 Rorug01G0232600 Rorug01G0232600 Rorug01G0311900 Rorug01G0311900 Rorug01G0318400 Rorug01G0318500 Rorug01G0318500 Rorug01G0318500 Rorug01G0427900 Rorug01G0427900 Rorug01G0428000 Rorug01G0428200 Rorug01G0428300 Rorug01G0428400 Rorug01G0431500 Rorug01G0431600 Rorug01G0431600 Rorug02G0033800 Rorug02G0206300 Rorug03G0081900 Rorug03G0083200 Rorug03G0083200 Rorug03G0083300 Rorug04G0025100 Rorug04G0025100 Rorug04G0025200 Rorug04G0025300 Rorug04G0058600 Rorug04G0058700 Rorug04G0058800 Rorug04G0098400 Rorug04G0098500 Rorug05G0274500 Rorug05G0274600 Rorug05G0274800 Rorug06G0008500 Rorug06G0009100 Rorug06G0018000
rosa_samantha Rh1AG031700 Rh1AG036100 Rh1AG089800 Rh1AG239800 Rh1AG239900 Rh1AG242000 Rh1AG242300 Rh1AG245600 Rh1AG262600 Rh1AG319700 Rh1AG319800 Rh1AG319900 Rh1AG327200 Rh1AG451100 Rh1AG451200 Rh1AG451300 Rh1AG451600 Rh1AG451700 Rh1BG027200 Rh1BG071600 Rh1BG090700 Rh1BG211000 Rh1BG213000 Rh1BG213500 Rh1BG282800 Rh1BG288400 Rh1BG408100 Rh1BG408200 Rh1BG408400 Rh1BG408700 Rh1CG026300 Rh1CG028300 Rh1CG224100 Rh1CG226000 Rh1CG226100 Rh1CG229300 Rh1CG229400 Rh1CG245900 Rh1CG299200 Rh1CG299400 Rh1CG299500 Rh1CG303300 Rh1CG305100 Rh1CG422500 Rh1CG422600 Rh1CG422700 Rh1CG422800 Rh1CG422900 Rh1CG423100 Rh1CG423300 Rh1CG423400 Rh1CG426300 Rh1CG426600 Rh1DG239300 Rh1DG239600 Rh1DG258300 Rh1DG314200 Rh1DG314300 Rh1DG314400 Rh1DG320000 Rh1DG439200 Rh1DG439400 Rh1DG439500 Rh1DG439700 Rh1DG440000 Rh1DG443800 Rh2AG261800 Rh2BG080900 Rh2CG083300 Rh2DG078900 Rh2DG270000 Rh2DG270100 Rh3AG128400 Rh3AG130100 Rh3AG130500 Rh3AG332500 Rh3AG332600 Rh3AG332800 Rh3BG149700 Rh3BG151500 Rh3CG151400 Rh3CG354500 Rh3CG366800 Rh3DG150500 Rh3DG152200 Rh4AG101400 Rh4AG102900 Rh4AG148300 Rh4AG148600 Rh4BG098000 Rh4CG111100 Rh4CG111300 Rh4CG155100 Rh4DG094800 Rh5AG213600 Rh5AG346900 Rh5AG347000 Rh5BG357500 Rh5BG357700 Rh5BG485400 Rh5CG383100 Rh5CG383200 Rh5CG383300 Rh5CG509900 Rh5DG373000 Rh5DG373200 Rh6BG054300 Rh6BG126300 Rh6CG125100 Rh6CG185300 Rh6DG177000 Rh7AG276100 Rh7AG276200 Rh7BG230500 Rh7BG270500 Rh7BG364000 Rh7CG250100 Rh7CG295200 Rh7CG295300 Rh7DG389700
rosa_wichuraiana Rw0G001190 Rw0G010680 Rw0G013360 Rw0G014310 Rw0G014890 Rw0G020310 Rw0G021350 Rw0G022510 Rw1G003360 Rw1G004330 Rw1G006930 Rw1G008310 Rw1G021090 Rw1G021150 Rw1G021210 Rw1G023200 Rw1G023210 Rw1G028340 Rw1G028350 Rw1G028990 Rw1G032510 Rw1G039370 Rw1G039400 Rw1G039410 Rw1G039420 Rw1G039430 Rw2G006700 Rw2G020550 Rw2G020580 Rw3G012130 Rw3G012300 Rw3G012310 Rw3G028220 Rw3G029230 Rw5G021600 Rw5G032790 Rw6G011240 Rw7G027670 Rw7G032780

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 3 cut(s) 144, 960, 2031
AccB7I CCANNNNNTGG 1 cut(s) 122
AccI GTMKAC 1 cut(s) 397
AccII CGCG 1 cut(s) 705
AciI CCGC 4 cut(s) 368, 1072, 1698, 1900
AclWI GGATC 4 cut(s) 245, 1823, 1836, 2013
AcoI YGGCCR 1 cut(s) 3
AcsI RAATTY 5 cut(s) 384, 1046, 1189, 1258, 1810
AcuI CTGAAG 2 cut(s) 33, 1377
AfaI GTAC 6 cut(s) 783, 800, 880, 1585, 1590, 1802
AfiI CCNNNNNNNGG 4 cut(s) 122, 1122, 1507, 1522
AjnI CCWGG 2 cut(s) 570, 1704
AluBI AGCT 8 cut(s) 20, 143, 150, 500, 554, 791, 1086, 1234
AluI AGCT 8 cut(s) 20, 143, 150, 500, 554, 791, 1086, 1234
Alw21I GWGCWC 4 cut(s) 36, 793, 1088, 2032
Alw26I GTCTC 3 cut(s) 83, 247, 1938
AlwI GGATC 4 cut(s) 245, 1823, 1836, 2013
AlwNI CAGNNNCTG 1 cut(s) 110
AoxI GGCC 3 cut(s) 3, 1015, 1291
ApeKI GCWGC 1 cut(s) 150
ApoI RAATTY 5 cut(s) 384, 1046, 1189, 1258, 1810
Asp700I GAANNNNTTC 3 cut(s) 1058, 1671, 1838
AspLEI GCGC 2 cut(s) 896, 1419
AspS9I GGNCC 2 cut(s) 608, 1513
AsuC2I CCSGG 1 cut(s) 612
AsuHPI GGTGA 5 cut(s) 442, 494, 1694, 1807, 2010
AsuII TTCGAA 1 cut(s) 596
AsuNHI GCTAGC 1 cut(s) 1964
AvaII GGWCC 2 cut(s) 608, 1513
BalI TGGCCA 1 cut(s) 5
BamHI GGATCC 1 cut(s) 1828
BanII GRGCYC 2 cut(s) 793, 1088
BauI CACGAG 1 cut(s) 669
BbsI GAAGAC 2 cut(s) 326, 476
Bbv12I GWGCWC 4 cut(s) 36, 793, 1088, 2032
BbvI GCAGC 1 cut(s) 137
BccI CCATC 7 cut(s) 116, 609, 899, 1524, 1566, 1802, 2030
BceAI ACGGC 1 cut(s) 117
BcgI CGANNNNNNTGC 2 cut(s) 934, 968
BciT130I CCWGG 2 cut(s) 572, 1706
BciVI GTATCC 1 cut(s) 1942
BcnI CCSGG 1 cut(s) 612
BcoDI GTCTC 3 cut(s) 83, 247, 1938
BfaI CTAG 6 cut(s) 144, 891, 1019, 1299, 1965, 2033
BfmI CTRYAG 2 cut(s) 151, 883
BfoI RGCGCY 1 cut(s) 1420
BfuAI ACCTGC 3 cut(s) 144, 960, 2031
BfuI GTATCC 1 cut(s) 1942
BisI GCNGC 3 cut(s) 151, 1073, 1900
BlsI GCNGC 3 cut(s) 152, 1074, 1901
BmcAI AGTACT 1 cut(s) 1802
Bme1390I CCNGG 3 cut(s) 572, 612, 1706
Bme18I GGWCC 2 cut(s) 608, 1513
BmgT120I GGNCC 2 cut(s) 608, 1513
BmiI GGNNCC 3 cut(s) 609, 1630, 1830
BmrFI CCNGG 3 cut(s) 572, 612, 1706
BmsI GCATC 3 cut(s) 857, 991, 1694
BmtI GCTAGC 1 cut(s) 1968
BpiI GAAGAC 2 cut(s) 326, 476
Bpu14I TTCGAA 1 cut(s) 596
BpuEI CTTGAG 2 cut(s) 1424, 1661
BpuMI CCSGG 1 cut(s) 612
BsaBI GATNNNNATC 1 cut(s) 1571
BsaI GGTCTC 1 cut(s) 1938
BsaJI CCNNGG 1 cut(s) 570
Bsc4I CCNNNNNNNGG 4 cut(s) 122, 1122, 1507, 1522
Bse118I RCCGGY 1 cut(s) 1507
Bse1I ACTGG 3 cut(s) 393, 1808, 1846
Bse3DI GCAATG 2 cut(s) 363, 585
Bse8I GATNNNNATC 1 cut(s) 1571
BseBI CCWGG 2 cut(s) 572, 1706
BseDI CCNNGG 1 cut(s) 570
BseGI GGATG 4 cut(s) 620, 765, 1516, 1685
BseJI GATNNNNATC 1 cut(s) 1571
BseLI CCNNNNNNNGG 4 cut(s) 122, 1122, 1507, 1522
BseMI GCAATG 2 cut(s) 363, 585
BseMII CTCAG 5 cut(s) 68, 1073, 1249, 1757, 1967
BseNI ACTGG 3 cut(s) 393, 1808, 1846
BseRI GAGGAG 2 cut(s) 141, 1874
BseXI GCAGC 1 cut(s) 137
BsgI GTGCAG 3 cut(s) 715, 746, 1043
Bsh1236I CGCG 1 cut(s) 705
BshFI GGCC 3 cut(s) 5, 1017, 1293
BsiHKAI GWGCWC 4 cut(s) 36, 793, 1088, 2032
BsiSI CCGG 4 cut(s) 611, 956, 1014, 1508
BslFI GGGAC 3 cut(s) 98, 650, 1664
BslI CCNNNNNNNGG 4 cut(s) 122, 1122, 1507, 1522
BsmAI GTCTC 3 cut(s) 83, 247, 1938
BsmFI GGGAC 3 cut(s) 98, 650, 1664
BsmI GAATGC 2 cut(s) 841, 1482
BsnI GGCC 3 cut(s) 5, 1017, 1293
Bso31I GGTCTC 1 cut(s) 1938
Bsp119I TTCGAA 1 cut(s) 596
Bsp1286I GDGCHC 4 cut(s) 36, 793, 1088, 2032
Bsp1407I TGTACA 1 cut(s) 1588
Bsp143I GATC 9 cut(s) 59, 250, 273, 352, 527, 1152, 1223, 1828, 2005
BspACI CCGC 4 cut(s) 368, 1072, 1698, 1900
BspANI GGCC 3 cut(s) 5, 1017, 1293
BspCNI CTCAG 5 cut(s) 67, 1074, 1248, 1758, 1966
BspFNI CGCG 1 cut(s) 705
BspHI TCATGA 1 cut(s) 1998
BspLI GGNNCC 3 cut(s) 609, 1630, 1830
BspMAI CTGCAG 1 cut(s) 155
BspMI ACCTGC 3 cut(s) 144, 960, 2031
BspOI GCTAGC 1 cut(s) 1968
BspPI GGATC 4 cut(s) 245, 1823, 1836, 2013
BspT104I TTCGAA 1 cut(s) 596
BspTNI GGTCTC 1 cut(s) 1938
BsrDI GCAATG 2 cut(s) 363, 585
BsrFI RCCGGY 1 cut(s) 1507
BsrGI TGTACA 1 cut(s) 1588
BsrI ACTGG 3 cut(s) 393, 1808, 1846
BssAI RCCGGY 1 cut(s) 1507
BssECI CCNNGG 1 cut(s) 570
BssMI GATC 9 cut(s) 59, 250, 273, 352, 527, 1152, 1223, 1828, 2005
BssNAI GTATAC 1 cut(s) 398
BssSI CACGAG 1 cut(s) 669
Bst1107I GTATAC 1 cut(s) 398
Bst2BI CACGAG 1 cut(s) 669
Bst2UI CCWGG 2 cut(s) 572, 1706
Bst4CI ACNGT 5 cut(s) 241, 325, 342, 1529, 1588
Bst6I CTCTTC 3 cut(s) 39, 1778, 1941
BstAUI TGTACA 1 cut(s) 1588
BstBI TTCGAA 1 cut(s) 596
BstC8I GCNNGC 5 cut(s) 727, 1163, 1295, 1904, 1966
BstDEI CTNAG 8 cut(s) 54, 501, 875, 1082, 1235, 1424, 1766, 1953
BstEII GGTNACC 1 cut(s) 1700
BstF5I GGATG 4 cut(s) 620, 765, 1516, 1685
BstFNI CGCG 1 cut(s) 705
BstH2I RGCGCY 1 cut(s) 1420
BstHHI GCGC 2 cut(s) 896, 1419
BstKTI GATC 9 cut(s) 62, 253, 276, 355, 530, 1155, 1226, 1831, 2008
BstMAI GTCTC 3 cut(s) 83, 247, 1938
BstMBI GATC 9 cut(s) 59, 250, 273, 352, 527, 1152, 1223, 1828, 2005
BstMWI GCNNNNNNNGC 3 cut(s) 506, 702, 1299
BstNI CCWGG 2 cut(s) 572, 1706
BstNSI RCATGY 1 cut(s) 733
BstPI GGTNACC 1 cut(s) 1700
BstSCI CCNGG 3 cut(s) 570, 610, 1704
BstSFI CTRYAG 2 cut(s) 151, 883
BstUI CGCG 1 cut(s) 705
BstV1I GCAGC 1 cut(s) 137
BstV2I GAAGAC 2 cut(s) 326, 476
BstX2I RGATCY 1 cut(s) 1828
BstYI RGATCY 1 cut(s) 1828
BstZ17I GTATAC 1 cut(s) 398
BsuI GTATCC 1 cut(s) 1942
BsuRI GGCC 3 cut(s) 5, 1017, 1293
BtsCI GGATG 4 cut(s) 620, 765, 1516, 1685
BtsIMutI CAGTG 1 cut(s) 1763
BveI ACCTGC 3 cut(s) 144, 960, 2031
Cac8I GCNNGC 5 cut(s) 727, 1163, 1295, 1904, 1966
CaiI CAGNNNCTG 1 cut(s) 110
CciI TCATGA 1 cut(s) 1998
CfoI GCGC 2 cut(s) 896, 1419
Cfr10I RCCGGY 1 cut(s) 1507
Cfr13I GGNCC 2 cut(s) 608, 1513
Csp6I GTAC 6 cut(s) 782, 799, 879, 1584, 1589, 1801
CviAII CATG 5 cut(s) 730, 779, 1122, 1580, 1999
CviQI GTAC 6 cut(s) 782, 799, 879, 1584, 1589, 1801
DdeI CTNAG 8 cut(s) 54, 501, 875, 1082, 1235, 1424, 1766, 1953
DpnI GATC 9 cut(s) 61, 252, 275, 354, 529, 1154, 1225, 1830, 2007
DpnII GATC 9 cut(s) 59, 250, 273, 352, 527, 1152, 1223, 1828, 2005
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 3 cut(s) 39, 1778, 1941
EarI CTCTTC 3 cut(s) 39, 1778, 1941
Ecl136II GAGCTC 2 cut(s) 791, 1086
Eco147I AGGCCT 1 cut(s) 1293
Eco24I GRGCYC 2 cut(s) 793, 1088
Eco31I GGTCTC 1 cut(s) 1938
Eco47I GGWCC 2 cut(s) 608, 1513
Eco53kI GAGCTC 2 cut(s) 791, 1086
Eco57I CTGAAG 2 cut(s) 33, 1377
Eco91I GGTNACC 1 cut(s) 1700
EcoICRI GAGCTC 2 cut(s) 791, 1086
EcoO65I GGTNACC 1 cut(s) 1700
EcoRII CCWGG 2 cut(s) 570, 1704
EcoT22I ATGCAT 2 cut(s) 843, 1123
EcoT38I GRGCYC 2 cut(s) 793, 1088
FaeI CATG 5 cut(s) 733, 782, 1125, 1583, 2002
FalI AAGNNNNNCTT 2 cut(s) 1763, 1795
FaqI GGGAC 3 cut(s) 98, 650, 1664
FatI CATG 5 cut(s) 729, 778, 1121, 1579, 1998
FauNDI CATATG 1 cut(s) 837
FblI GTMKAC 1 cut(s) 397
Fnu4HI GCNGC 3 cut(s) 151, 1073, 1900
FokI GGATG 4 cut(s) 627, 752, 1503, 1672
FriOI GRGCYC 2 cut(s) 793, 1088
Fsp4HI GCNGC 3 cut(s) 151, 1073, 1900
FspBI CTAG 6 cut(s) 144, 891, 1019, 1299, 1965, 2033
GlaI GCGC 2 cut(s) 895, 1418
GluI GCNGC 3 cut(s) 151, 1073, 1900
HaeII RGCGCY 1 cut(s) 1420
HaeIII GGCC 3 cut(s) 5, 1017, 1293
HapII CCGG 4 cut(s) 611, 956, 1014, 1508
HhaI GCGC 2 cut(s) 896, 1419
Hin1II CATG 5 cut(s) 733, 782, 1125, 1583, 2002
Hin6I GCGC 2 cut(s) 894, 1417
HinP1I GCGC 2 cut(s) 894, 1417
HinfI GANTC 3 cut(s) 107, 449, 1010
HpaII CCGG 4 cut(s) 611, 956, 1014, 1508
HphI GGTGA 5 cut(s) 442, 494, 1694, 1807, 2010
Hpy166II GTNNAC 6 cut(s) 237, 398, 685, 735, 1496, 1513
Hpy8I GTNNAC 6 cut(s) 237, 398, 685, 735, 1496, 1513
Hpy99I CGWCG 1 cut(s) 1899
HpyAV CCTTC 9 cut(s) 172, 206, 624, 1303, 1401, 1828, 1975, 1996, 2025
HpyCH4III ACNGT 5 cut(s) 241, 325, 342, 1529, 1588
HpyCH4IV ACGT 3 cut(s) 213, 400, 534
HpyF10VI GCNNNNNNNGC 3 cut(s) 506, 702, 1299
HpyF3I CTNAG 8 cut(s) 54, 501, 875, 1082, 1235, 1424, 1766, 1953
HpySE526I ACGT 3 cut(s) 213, 400, 534
Hsp92II CATG 5 cut(s) 733, 782, 1125, 1583, 2002
HspAI GCGC 2 cut(s) 894, 1417
Kzo9I GATC 9 cut(s) 59, 250, 273, 352, 527, 1152, 1223, 1828, 2005
LmnI GCTCC 2 cut(s) 788, 1661
Lsp1109I GCAGC 1 cut(s) 137
LweI GCATC 3 cut(s) 857, 991, 1694
MaeI CTAG 6 cut(s) 144, 891, 1019, 1299, 1965, 2033
MaeII ACGT 3 cut(s) 213, 400, 534
MaeIII GTNAC 4 cut(s) 342, 1529, 1700, 1741
MalI GATC 9 cut(s) 61, 252, 275, 354, 529, 1154, 1225, 1830, 2007
MboI GATC 9 cut(s) 59, 250, 273, 352, 527, 1152, 1223, 1828, 2005
MflI RGATCY 1 cut(s) 1828
MhlI GDGCHC 4 cut(s) 36, 793, 1088, 2032
MlsI TGGCCA 1 cut(s) 5
MluNI TGGCCA 1 cut(s) 5
MlyI GAGTC 1 cut(s) 1004
MmeI TCCRAC 2 cut(s) 1836, 1926
Mox20I TGGCCA 1 cut(s) 5
Mph1103I ATGCAT 2 cut(s) 843, 1123
MroXI GAANNNNTTC 3 cut(s) 1058, 1671, 1838
MscI TGGCCA 1 cut(s) 5
MseI TTAA 3 cut(s) 279, 717, 1734
MslI CAYNNNNRTG 1 cut(s) 377
Msp20I TGGCCA 1 cut(s) 5
MspA1I CMGCKG 1 cut(s) 1698
MspI CCGG 4 cut(s) 611, 956, 1014, 1508
MspR9I CCNGG 3 cut(s) 572, 612, 1706
Mva1269I GAATGC 2 cut(s) 841, 1482
MvaI CCWGG 2 cut(s) 572, 1706
MvnI CGCG 1 cut(s) 705
MwoI GCNNNNNNNGC 3 cut(s) 506, 702, 1299
NciI CCSGG 1 cut(s) 612
NdeI CATATG 1 cut(s) 837
NdeII GATC 9 cut(s) 59, 250, 273, 352, 527, 1152, 1223, 1828, 2005
NheI GCTAGC 1 cut(s) 1964
NlaIII CATG 5 cut(s) 733, 782, 1125, 1583, 2002
NlaIV GGNNCC 3 cut(s) 609, 1630, 1830
NmuCI GTSAC 2 cut(s) 1700, 1741
NsiI ATGCAT 2 cut(s) 843, 1123
NspI RCATGY 1 cut(s) 733
NspV TTCGAA 1 cut(s) 596
PagI TCATGA 1 cut(s) 1998
PceI AGGCCT 1 cut(s) 1293
PctI GAATGC 2 cut(s) 841, 1482
PdmI GAANNNNTTC 3 cut(s) 1058, 1671, 1838
PfeI GAWTC 2 cut(s) 107, 449
PflMI CCANNNNNTGG 1 cut(s) 122
PfoI TCCNGGA 1 cut(s) 610
PkrI GCNGC 3 cut(s) 152, 1074, 1901
PleI GAGTC 1 cut(s) 1004
PpsI GAGTC 1 cut(s) 1004
Psp124BI GAGCTC 2 cut(s) 793, 1088
Psp6I CCWGG 2 cut(s) 570, 1704
PspEI GGTNACC 1 cut(s) 1700
PspGI CCWGG 2 cut(s) 570, 1704
PspN4I GGNNCC 3 cut(s) 609, 1630, 1830
PspPI GGNCC 2 cut(s) 608, 1513
PsrI GAACNNNNNNTAC 2 cut(s) 871, 903
PstI CTGCAG 1 cut(s) 155
PstNI CAGNNNCTG 1 cut(s) 110
PsuI RGATCY 1 cut(s) 1828
RsaI GTAC 6 cut(s) 783, 800, 880, 1585, 1590, 1802
RsaNI GTAC 6 cut(s) 782, 799, 879, 1584, 1589, 1801
RseI CAYNNNNRTG 1 cut(s) 377
SacI GAGCTC 2 cut(s) 793, 1088
SaqAI TTAA 3 cut(s) 279, 717, 1734
SatI GCNGC 3 cut(s) 151, 1073, 1900
Sau3AI GATC 9 cut(s) 59, 250, 273, 352, 527, 1152, 1223, 1828, 2005
Sau96I GGNCC 2 cut(s) 608, 1513
ScaI AGTACT 1 cut(s) 1802
SchI GAGTC 1 cut(s) 1004
ScrFI CCNGG 3 cut(s) 572, 612, 1706
SduI GDGCHC 4 cut(s) 36, 793, 1088, 2032
SfaNI GCATC 3 cut(s) 857, 991, 1694
SfcI CTRYAG 2 cut(s) 151, 883
SfuI TTCGAA 1 cut(s) 596
SgrAI CRCCGGYG 1 cut(s) 1507
SinI GGWCC 2 cut(s) 608, 1513
SmiMI CAYNNNNRTG 1 cut(s) 377
SmlI CTYRAG 2 cut(s) 1439, 1640
SmoI CTYRAG 2 cut(s) 1439, 1640
SseBI AGGCCT 1 cut(s) 1293
SsiI CCGC 4 cut(s) 368, 1072, 1698, 1900
SspMI CTAG 6 cut(s) 144, 891, 1019, 1299, 1965, 2033
SstI GAGCTC 2 cut(s) 793, 1088
StuI AGGCCT 1 cut(s) 1293
StyD4I CCNGG 3 cut(s) 570, 610, 1704
TaaI ACNGT 5 cut(s) 241, 325, 342, 1529, 1588
TaiI ACGT 3 cut(s) 216, 403, 537
TaqI TCGA 5 cut(s) 181, 596, 639, 1151, 1842
TatI WGTACW 3 cut(s) 781, 1588, 1800
TauI GCSGC 2 cut(s) 1075, 1902
TfiI GAWTC 2 cut(s) 107, 449
Tru1I TTAA 3 cut(s) 279, 717, 1734
Tru9I TTAA 3 cut(s) 279, 717, 1734
TscAI CASTG 1 cut(s) 1770
TseFI GTSAC 2 cut(s) 1700, 1741
TseI GCWGC 1 cut(s) 150
Tsp45I GTSAC 2 cut(s) 1700, 1741
TspDTI ATGAA 7 cut(s) 87, 449, 574, 1262, 1561, 1928, 2015
TspGWI ACGGA 1 cut(s) 1883
TspRI CASTG 1 cut(s) 1770
Van91I CCANNNNNTGG 1 cut(s) 122
VpaK11BI GGWCC 2 cut(s) 608, 1513
XapI RAATTY 5 cut(s) 384, 1046, 1189, 1258, 1810
XbaI TCTAGA 1 cut(s) 2032
XceI RCATGY 1 cut(s) 733
XcmI CCANNNNNNNNNTGG 1 cut(s) 571
XmiI GTMKAC 1 cut(s) 397
XmnI GAANNNNTTC 3 cut(s) 1058, 1671, 1838
XspI CTAG 6 cut(s) 144, 891, 1019, 1299, 1965, 2033
ZrmI AGTACT 1 cut(s) 1802
Zsp2I ATGCAT 2 cut(s) 843, 1123
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.