Rw0G013360

Cyclic nucleotide-gated ion channel 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Contig00600
OG0000017
Physical Location & Seq
Reverse (-)
22173 .. 27356
5184 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw0G013360.1

Sequence Viewer

Length: 1605 bp
ATGGAGAAGAGCAACTCATCTAGGAACCCTATTGTCCCTGGATTCAATATGGTAGAGCATTGGACACAAGAGGCTGCAAAGGAGAAACCATTCCTTCAAGTATGGAAGAGGATATTTGCAGTATCATGTGTGTTTGCTGTCTTACTGGATCCTTTGTTTTTGTACATTCCTATAGTTAACGAGGATATGAAGTGTCTCAGATTGGAAAACAAGTTGATGAAAGCTGCTATCTTTTTGCGATCAATAACAGATCTCTTGTATATAGTAAACATTGTTTTTCAAATCTATATTGAAGACAAAGCTAAGAACTTTTGGGTCATGGGGAAATCATATTGTCAGTCACTCATCCCCAGGGGCGGAACTATGTTCAGGTCCAGCGGGGTAGTAATTTGCATTTTCTTTACAAAATTGAGAGGCTCAAAGTCAAGGATTTTTTTGAACTCTCTTATTCTCTTTCAATATCTACCACGGGTTTTTCGGATCTACCTATCGTTTGAAGAACTTAAGAACCGTATCCGCTCTGCATTGAAATTTTTTACCTTCATCCTTGCAAGCAATGTACTTGGAGCTCTTTGGTACTTTTTCTCTATTCAAAGAGAGATAAATTGTTGGCAATATGCCTGTCGAAGTGTAAAAGGGTGTAAACTCAATGCTTTTGACTGTGATGATCATGCATTCAGAAATATCACACTTATAAGTAATTTATGTCCTGTAAATCCACCCAACGTAACACTCTTTGATTTTGGTATATTTATTGATGCCGTCCAATCTGGTATGTTGAGATCAACAGATTTTCCCCAAAAGTTCTTGCACTGTTTCTGGTGGGGTCTCCGTAATCTAAGCTCTTTTGGCCAAAATCTCCAGACAAGTACCTATGCTTGGGAAGACCTCTTTGCAATTTTTATTTCTATCGGTGGCATGCTACTATTTTTAATATATCTGAATGGAATTCTGCAGACATATATGCAGTTGGAAACTACTAGATCAAAGCAGCAAAGGAAATTGATGAAAATGGAGAGGAAGAGAGGTCCAGAGATAGCATCATGGTTACATAACAATGGCATCCCTTTGAATATGAAGAAGATGATAATGACATGTGTACTACACGAACTTGAAGCAAATCAAGATGTCAATGTCGAGAATATCCTCTCTATTCTTCCCTTGGAATGTTTGAAGTTTATCAAGCGGCATCTATGCTTGAATACGCTAAAGAAAGTGCCAGTGCTTCAAGCTATGGATGAACAAGTGCTGACAGCAGTGTGTGATAGTCATCTTAAGCCAGTAATCTATAGTGAGAACAGCTATATTATTCGGGAGAGTGAGCCAATTGATAGGATGCTTTTCATCACGCAAGGCATAGTGCGCACCTACAAACCATGTCTCGAGAAAGGTGACATATACGGAGAAGAACTTCTAAATTGGGCTTTAAACAATGTCACCTCCTCTTCTGATGACTTGCCGATCTCAAACAGAATTGTTAAGTGCAGCACAAAAGTTGAAGCCTTTACTTTCATAGCCAGCGACTTGAAGAGCGTAGTTTCTGAATTCTGGACTGATGCTGTCGAGGAGAACTCTTACCCCACTGTTTCTGAACAATTGAACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
Ion_trans

Protein Analysis

534

Amino Acids

61.79

Weight (kDa)

8.73

Isoelectric Point (pI)

44.1

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000017)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07351 FvH4_1g11800 FvH4_1g11800 FvH4_1g11800 FvH4_1g11800 FvH4_1g11800 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_4g14360 FvH4_6g13561 FvH4_6g13562 FvH4_6g13580 FvH4_6g13590 FvH4_6g13590 FvH4_6g13590 FvH4_6g13731 FvH4_6g13770 FvH4_6g13800 FvH4_6g13800 FvH4_6g13860 FvH4_6g13870 FvH4_6g13870 FvH4_6g13870 FvH4_6g13870 FvH4_6g13870 FvH4_6g13890 FvH4_6g33801 FvH4_7g13020 FvH4_7g13270 FvH4_7g13270 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g14580 FvH4_7g14580 FvH4_7g14580 FvH4_7g14600 FvH4_7g14600 FvH4_7g20030 FvH4_7g20510 FvH4_7g20510 FvH4_7g20510 FvH4_7g20670 FvH4_7g20670 FvH4_7g20670 FvH4_7g20670 FvH4_7g20690 FvH4_7g20690 FvH4_7g31930 FvH4_7g31930 FvH4_7g31940 FvH4_7g31940
malus_domestica MD01G1115700.v1.1 MD01G1115800.v1.1 MD01G1116600.v1.1 MD01G1116700.v1.1 MD01G1117000.v1.1 MD01G1225000.v1.1 MD02G1077900.v1.1 MD02G1078000.v1.1 MD02G1078200.v1.1 MD02G1078400.v1.1 MD02G1084300.v1.1 MD04G1004700.v1.1 MD04G1123100.v1.1 MD04G1123200.v1.1 MD04G1128000.v1.1 MD04G1128400.v1.1 MD05G1299700.v1.1 MD05G1300000.v1.1 MD07G1184000.v1.1 MD07G1292300.v1.1 MD08G1214800.v1.1
prunus_persica Prupe.1G205100_v2.0.a1 Prupe.1G205100_v2.0.a1 Prupe.1G205200_v2.0.a1 Prupe.2G222300_v2.0.a1 Prupe.2G223300_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223600_v2.0.a1 Prupe.2G223600_v2.0.a1 Prupe.2G223600_v2.0.a1 Prupe.2G223700_v2.0.a1 Prupe.2G223700_v2.0.a1 Prupe.2G223700_v2.0.a1 Prupe.2G223700_v2.0.a1 Prupe.2G223800_v2.0.a1 Prupe.2G223900_v2.0.a1 Prupe.2G224000_v2.0.a1 Prupe.5G162000_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G291000_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G210400_v2.0.a1 Prupe.7G210600_v2.0.a1 Prupe.7G210700_v2.0.a1 Prupe.7G210800_v2.0.a1 Prupe.7G210900_v2.0.a1 Prupe.8G097600_v2.0.a1 Prupe.8G097800_v2.0.a1 Prupe.8G097800_v2.0.a1
pyrus_communis pycom01g14430 pycom01g14440 pycom01g23130 pycom01g23160 pycom01g23330 pycom02g06210 pycom02g06220 pycom02g06250 pycom02g06270 pycom02g06710 pycom03g05360 pycom03g05380 pycom04g11470 pycom04g11480 pycom04g11520 pycom04g11560 pycom04g11600 pycom04g11610 pycom04g11650 pycom04g11660 pycom04g11670 pycom05g27790 pycom07g17630 pycom08g20960 pycom126g00020 pycom126g00030
rosa_chinensis RchiOBHm_Chr1g0318251 RchiOBHm_Chr1g0318731 RchiOBHm_Chr1g0339101 RchiOBHm_Chr1g0339111 RchiOBHm_Chr1g0347151 RchiOBHm_Chr1g0347161 RchiOBHm_Chr1g0347221 RchiOBHm_Chr1g0352401 RchiOBHm_Chr1g0352441 RchiOBHm_Chr1g0352461 RchiOBHm_Chr1g0356131 RchiOBHm_Chr1g0363991 RchiOBHm_Chr1g0364791 RchiOBHm_Chr1g0364801 RchiOBHm_Chr1g0364811 RchiOBHm_Chr1g0364851 RchiOBHm_Chr1g0364951 RchiOBHm_Chr1g0370821 RchiOBHm_Chr1g0381221 RchiOBHm_Chr1g0381231 RchiOBHm_Chr1g0381261 RchiOBHm_Chr1g0381271 RchiOBHm_Chr1g0381341 RchiOBHm_Chr1g0381351 RchiOBHm_Chr1g0381391 RchiOBHm_Chr1g0381801 RchiOBHm_Chr1g0381821 RchiOBHm_Chr2g0093241 RchiOBHm_Chr2g0116391 RchiOBHm_Chr3g0466441 RchiOBHm_Chr3g0466631 RchiOBHm_Chr3g0466651 RchiOBHm_Chr3g0496921 RchiOBHm_Chr4g0400441 RchiOBHm_Chr4g0400501 RchiOBHm_Chr4g0400511 RchiOBHm_Chr4g0400691 RchiOBHm_Chr4g0400701 RchiOBHm_Chr4g0404331 RchiOBHm_Chr5g0052101 RchiOBHm_Chr5g0052111 RchiOBHm_Chr5g0052171 RchiOBHm_Chr5g0052181 RchiOBHm_Chr6g0264161 RchiOBHm_Chr6g0265551 RchiOBHm_Chr7g0213571 RchiOBHm_Chr7g0213581
rosa_laevigata RLG00000002796 RLG00000003261 RLG00000007935 RLG00000007936 RLG00000009187 RLG00000014179 RLG00000016381 RLG00000018265 RLG00000024558 RLG00000024574 RLG00000026232 RLG00000026234 RLG00000026236 RLG00000026237 RLG00000027459 RLG00000027461 RLG00000027463 RLG00000027530 RLG00000028103 RLG00000028304 RLG00000028333 RLG00000029214 RLG00000029848 RLG00000029951 RLG00000030115 RLG00000030552 RLG00000033668 RLG00000034840 RLG00000034841 RLG00000034842 RLG00000035830
rosa_multiflora Rmu_sc0000654.1_g000004 Rmu_sc0000675.1_g000025 Rmu_sc0001075.1_g000002 Rmu_sc0001726.1_g000004 Rmu_sc0001772.1_g000061 Rmu_sc0001772.1_g000065 Rmu_sc0002067.1_g000002 Rmu_sc0002183.1_g000001 Rmu_sc0002183.1_g000006 Rmu_sc0002244.1_g000003 Rmu_sc0002313.1_g000004 Rmu_sc0002319.1_g000004 Rmu_sc0002539.1_g000085 Rmu_sc0002636.1_g000004 Rmu_sc0003229.1_g000007 Rmu_sc0003313.1_g000020 Rmu_sc0003546.1_g000007 Rmu_sc0003724.1_g000015 Rmu_sc0003936.1_g000029 Rmu_sc0004191.1_g000067 Rmu_sc0004525.1_g000012 Rmu_sc0005122.1_g000009 Rmu_sc0005255.1_g000040 Rmu_sc0005338.1_g000016 Rmu_sc0005584.1_g000008 Rmu_sc0006460.1_g000013 Rmu_sc0006872.1_g000011 Rmu_sc0006872.1_g000015 Rmu_sc0006872.1_g000016 Rmu_sc0006952.1_g000013 Rmu_sc0007342.1_g000005 Rmu_sc0007342.1_g000006 Rmu_sc0008418.1_g000003 Rmu_sc0008418.1_g000006 Rmu_sc0008636.1_g000007 Rmu_sc0008636.1_g000008 Rmu_sc0009205.1_g000014 Rmu_sc0009365.1_g000014 Rmu_sc0009917.1_g000002 Rmu_sc0019289.1_g000003 Rmu_ssc0000098.1_g000011 Rmu_ssc0000098.1_g000012 Rmu_ssc0000167.1_g000018 Rmu_ssc0000167.1_g000024 Rmu_ssc0000326.1_g000015
rosa_roxburghii Rroxscaffold_166G00440780 Rroxscaffold_176G00431500 Rroxscaffold_1G00015080 Rroxscaffold_1G00027880 Rroxscaffold_1G00027890 Rroxscaffold_1G00027920 Rroxscaffold_2G00127250 Rroxscaffold_2G00148380 Rroxscaffold_3G00219450 Rroxscaffold_3G00232170 Rroxscaffold_3G00232210 Rroxscaffold_3G00242230 Rroxscaffold_3G00242240 Rroxscaffold_3G00244790 Rroxscaffold_3G00245790 Rroxscaffold_4G00278400 Rroxscaffold_4G00278430 Rroxscaffold_4G00278670 Rroxscaffold_4G00278680 Rroxscaffold_4G00278690 Rroxscaffold_4G00278700 Rroxscaffold_4G00278720 Rroxscaffold_4G00291690 Rroxscaffold_4G00292070 Rroxscaffold_4G00292090 Rroxscaffold_4G00292770 Rroxscaffold_4G00302240 Rroxscaffold_4G00302860 Rroxscaffold_4G00311320 Rroxscaffold_4G00311330 Rroxscaffold_4G00320570 Rroxscaffold_4G00322050 Rroxscaffold_4G00329480 Rroxscaffold_4G00329730 Rroxscaffold_5G00345500 Rroxscaffold_5G00345510 Rroxscaffold_5G00360830 Rroxscaffold_5G00360840 Rroxscaffold_6G00393450 Rroxscaffold_6G00404030 Rroxscaffold_6G00414220 Rroxscaffold_6G00414230 Rroxscaffold_6G00414280 Rroxscaffold_6G00414290 Rroxscaffold_6G00414350 Rroxscaffold_6G00414470 Rroxscaffold_7G00202570 Rroxscaffold_7G00203460 Rroxscaffold_7G00203470
rosa_rugosa Rorug01G0020500 Rorug01G0020600 Rorug01G0020700 Rorug01G0143700.1 Rorug01G0225700 Rorug01G0228500 Rorug01G0228600 Rorug01G0228600 Rorug01G0228700 Rorug01G0228800 Rorug01G0228800 Rorug01G0229000 Rorug01G0229300 Rorug01G0229400 Rorug01G0229600 Rorug01G0229700 Rorug01G0232200 Rorug01G0232600 Rorug01G0232600 Rorug01G0311900 Rorug01G0311900 Rorug01G0318400 Rorug01G0318500 Rorug01G0318500 Rorug01G0318500 Rorug01G0427900 Rorug01G0427900 Rorug01G0428000 Rorug01G0428200 Rorug01G0428300 Rorug01G0428400 Rorug01G0431500 Rorug01G0431600 Rorug01G0431600 Rorug02G0033800 Rorug02G0206300 Rorug03G0081900 Rorug03G0083200 Rorug03G0083200 Rorug03G0083300 Rorug04G0025100 Rorug04G0025100 Rorug04G0025200 Rorug04G0025300 Rorug04G0058600 Rorug04G0058700 Rorug04G0058800 Rorug04G0098400 Rorug04G0098500 Rorug05G0274500 Rorug05G0274600 Rorug05G0274800 Rorug06G0008500 Rorug06G0009100 Rorug06G0018000
rosa_samantha Rh1AG031700 Rh1AG036100 Rh1AG089800 Rh1AG239800 Rh1AG239900 Rh1AG242000 Rh1AG242300 Rh1AG245600 Rh1AG262600 Rh1AG319700 Rh1AG319800 Rh1AG319900 Rh1AG327200 Rh1AG451100 Rh1AG451200 Rh1AG451300 Rh1AG451600 Rh1AG451700 Rh1BG027200 Rh1BG071600 Rh1BG090700 Rh1BG211000 Rh1BG213000 Rh1BG213500 Rh1BG282800 Rh1BG288400 Rh1BG408100 Rh1BG408200 Rh1BG408400 Rh1BG408700 Rh1CG026300 Rh1CG028300 Rh1CG224100 Rh1CG226000 Rh1CG226100 Rh1CG229300 Rh1CG229400 Rh1CG245900 Rh1CG299200 Rh1CG299400 Rh1CG299500 Rh1CG303300 Rh1CG305100 Rh1CG422500 Rh1CG422600 Rh1CG422700 Rh1CG422800 Rh1CG422900 Rh1CG423100 Rh1CG423300 Rh1CG423400 Rh1CG426300 Rh1CG426600 Rh1DG239300 Rh1DG239600 Rh1DG258300 Rh1DG314200 Rh1DG314300 Rh1DG314400 Rh1DG320000 Rh1DG439200 Rh1DG439400 Rh1DG439500 Rh1DG439700 Rh1DG440000 Rh1DG443800 Rh2AG261800 Rh2BG080900 Rh2CG083300 Rh2DG078900 Rh2DG270000 Rh2DG270100 Rh3AG128400 Rh3AG130100 Rh3AG130500 Rh3AG332500 Rh3AG332600 Rh3AG332800 Rh3BG149700 Rh3BG151500 Rh3CG151400 Rh3CG354500 Rh3CG366800 Rh3DG150500 Rh3DG152200 Rh4AG101400 Rh4AG102900 Rh4AG148300 Rh4AG148600 Rh4BG098000 Rh4CG111100 Rh4CG111300 Rh4CG155100 Rh4DG094800 Rh5AG213600 Rh5AG346900 Rh5AG347000 Rh5BG357500 Rh5BG357700 Rh5BG485400 Rh5CG383100 Rh5CG383200 Rh5CG383300 Rh5CG509900 Rh5DG373000 Rh5DG373200 Rh6BG054300 Rh6BG126300 Rh6CG125100 Rh6CG185300 Rh6DG177000 Rh7AG276100 Rh7AG276200 Rh7BG230500 Rh7BG270500 Rh7BG364000 Rh7CG250100 Rh7CG295200 Rh7CG295300 Rh7DG389700
rosa_wichuraiana Rw0G001190 Rw0G010680 Rw0G013360 Rw0G014310 Rw0G014890 Rw0G020310 Rw0G021350 Rw0G022510 Rw1G003360 Rw1G004330 Rw1G006930 Rw1G008310 Rw1G021090 Rw1G021150 Rw1G021210 Rw1G023200 Rw1G023210 Rw1G028340 Rw1G028350 Rw1G028990 Rw1G032510 Rw1G039370 Rw1G039400 Rw1G039410 Rw1G039420 Rw1G039430 Rw2G006700 Rw2G020550 Rw2G020580 Rw3G012130 Rw3G012300 Rw3G012310 Rw3G028220 Rw3G029230 Rw5G021600 Rw5G032790 Rw6G011240 Rw7G027670 Rw7G032780

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 695
Acc16I TGCGCA 1 cut(s) 1364
AccBSI CCGCTC 1 cut(s) 519
AciI CCGC 4 cut(s) 357, 378, 517, 1186
AclWI GGATC 3 cut(s) 143, 156, 488
AcoI YGGCCR 1 cut(s) 850
AcsI RAATTY 3 cut(s) 530, 948, 1544
AfaI GTAC 5 cut(s) 164, 561, 578, 871, 1101
AfiI CCNNNNNNNGG 2 cut(s) 356, 879
AflII CTTAAG 2 cut(s) 503, 1274
AflIII ACRYGT 1 cut(s) 1094
AjnI CCWGG 2 cut(s) 37, 350
AluBI AGCT 6 cut(s) 224, 302, 569, 843, 1232, 1302
AluI AGCT 6 cut(s) 224, 302, 569, 843, 1232, 1302
Alw21I GWGCWC 1 cut(s) 571
Alw26I GTCTC 3 cut(s) 200, 833, 1385
AlwI GGATC 3 cut(s) 143, 156, 488
Ama87I CYCGRG 1 cut(s) 1382
AoxI GGCC 1 cut(s) 850
ApeKI GCWGC 4 cut(s) 74, 224, 991, 1485
ApoI RAATTY 3 cut(s) 530, 948, 1544
Asp700I GAANNNNTTC 2 cut(s) 89, 1410
AspLEI GCGC 1 cut(s) 1365
AspS9I GGNCC 2 cut(s) 372, 1028
AsuHPI GGTGA 2 cut(s) 1403, 1429
AvaI CYCGRG 1 cut(s) 1382
AvaII GGWCC 2 cut(s) 372, 1028
BalI TGGCCA 1 cut(s) 852
BamHI GGATCC 1 cut(s) 148
BanII GRGCYC 1 cut(s) 571
BbsI GAAGAC 2 cut(s) 300, 891
Bbv12I GWGCWC 1 cut(s) 571
BbvI GCAGC 4 cut(s) 61, 211, 1003, 1497
BceAI ACGGC 1 cut(s) 746
BciT130I CCWGG 2 cut(s) 39, 352
BciVI GTATCC 1 cut(s) 524
BclI TGATCA 1 cut(s) 667
BcoDI GTCTC 3 cut(s) 200, 833, 1385
BfaI CTAG 3 cut(s) 21, 981, 1603
BfmI CTRYAG 3 cut(s) 171, 953, 1288
BfrI CTTAAG 2 cut(s) 503, 1274
BfuI GTATCC 1 cut(s) 524
BglII AGATCT 1 cut(s) 250
BisI GCNGC 5 cut(s) 75, 225, 992, 1187, 1486
BlsI GCNGC 5 cut(s) 76, 226, 993, 1188, 1487
Bme1390I CCNGG 2 cut(s) 39, 352
Bme18I GGWCC 2 cut(s) 372, 1028
BmeT110I CYCGRG 1 cut(s) 1382
BmgT120I GGNCC 2 cut(s) 372, 1028
BmiI GGNNCC 2 cut(s) 26, 150
BmrFI CCNGG 2 cut(s) 39, 352
BmsI GCATC 6 cut(s) 748, 1049, 1071, 1198, 1326, 1546
BpiI GAAGAC 2 cut(s) 300, 891
BplI GAGNNNNNCTC 2 cut(s) 1556, 1588
BpmI CTGGAG 1 cut(s) 845
BsaBI GATNNNNATC 1 cut(s) 1269
BsaI GGTCTC 1 cut(s) 833
BsaJI CCNNGG 5 cut(s) 37, 350, 351, 467, 1161
Bsc4I CCNNNNNNNGG 2 cut(s) 356, 879
Bse1I ACTGG 3 cut(s) 150, 1220, 1280
Bse3DI GCAATG 1 cut(s) 562
Bse8I GATNNNNATC 1 cut(s) 1269
BseBI CCWGG 2 cut(s) 39, 352
BseDI CCNNGG 5 cut(s) 37, 350, 351, 467, 1161
BseGI GGATG 5 cut(s) 345, 543, 1062, 1243, 1341
BseJI GATNNNNATC 1 cut(s) 1269
BseLI CCNNNNNNNGG 2 cut(s) 356, 879
BseMI GCAATG 1 cut(s) 562
BseMII CTCAG 1 cut(s) 211
BseNI ACTGG 3 cut(s) 150, 1220, 1280
BseRI GAGGAG 2 cut(s) 1432, 1580
BseXI GCAGC 4 cut(s) 61, 211, 1003, 1497
BsgI GTGCAG 1 cut(s) 1504
BshFI GGCC 1 cut(s) 852
BsiHKAI GWGCWC 1 cut(s) 571
BsiHKCI CYCGRG 1 cut(s) 1382
BslFI GGGAC 1 cut(s) 20
BslI CCNNNNNNNGG 2 cut(s) 356, 879
BsmAI GTCTC 3 cut(s) 200, 833, 1385
BsmFI GGGAC 1 cut(s) 20
BsmI GAATGC 1 cut(s) 674
BsnI GGCC 1 cut(s) 852
Bso31I GGTCTC 1 cut(s) 833
BsoBI CYCGRG 1 cut(s) 1382
Bsp1286I GDGCHC 1 cut(s) 571
Bsp1407I TGTACA 1 cut(s) 162
Bsp143I GATC 8 cut(s) 148, 239, 250, 480, 667, 782, 983, 1461
BspACI CCGC 4 cut(s) 357, 378, 517, 1186
BspANI GGCC 1 cut(s) 852
BspCNI CTCAG 1 cut(s) 210
BspLI GGNNCC 2 cut(s) 26, 150
BspMAI CTGCAG 1 cut(s) 957
BspPI GGATC 3 cut(s) 143, 156, 488
BspQI GCTCTTC 2 cut(s) 2, 1523
BspTI CTTAAG 2 cut(s) 503, 1274
BspTNI GGTCTC 1 cut(s) 833
BsrBI CCGCTC 1 cut(s) 519
BsrDI GCAATG 1 cut(s) 562
BsrGI TGTACA 1 cut(s) 162
BsrI ACTGG 3 cut(s) 150, 1220, 1280
BssECI CCNNGG 5 cut(s) 37, 350, 351, 467, 1161
BssMI GATC 8 cut(s) 148, 239, 250, 480, 667, 782, 983, 1461
BssT1I CCWWGG 1 cut(s) 1161
Bst2UI CCWGG 2 cut(s) 39, 352
Bst4CI ACNGT 4 cut(s) 512, 662, 815, 1585
Bst6I CTCTTC 5 cut(s) 2, 101, 1016, 1450, 1523
BstAFI CTTAAG 2 cut(s) 503, 1274
BstAUI TGTACA 1 cut(s) 162
BstC8I GCNNGC 3 cut(s) 553, 920, 1519
BstDEI CTNAG 3 cut(s) 197, 303, 839
BstDSI CCRYGG 1 cut(s) 467
BstF5I GGATG 5 cut(s) 345, 543, 1062, 1243, 1341
BstHHI GCGC 1 cut(s) 1365
BstKTI GATC 8 cut(s) 151, 242, 253, 483, 670, 785, 986, 1464
BstMAI GTCTC 3 cut(s) 200, 833, 1385
BstMBI GATC 8 cut(s) 148, 239, 250, 480, 667, 782, 983, 1461
BstMWI GCNNNNNNNGC 2 cut(s) 849, 1362
BstNI CCWGG 2 cut(s) 39, 352
BstNSI RCATGY 2 cut(s) 922, 1098
BstSCI CCNGG 2 cut(s) 37, 350
BstSFI CTRYAG 3 cut(s) 171, 953, 1288
BstV1I GCAGC 4 cut(s) 61, 211, 1003, 1497
BstV2I GAAGAC 2 cut(s) 300, 891
BstX2I RGATCY 3 cut(s) 148, 250, 480
BstYI RGATCY 3 cut(s) 148, 250, 480
BsuI GTATCC 1 cut(s) 524
BsuRI GGCC 1 cut(s) 852
BtgI CCRYGG 1 cut(s) 467
BtsCI GGATG 5 cut(s) 345, 543, 1062, 1243, 1341
BtsI GCAGTG 1 cut(s) 1263
BtsIMutI CAGTG 4 cut(s) 811, 1227, 1263, 1581
Cac8I GCNNGC 3 cut(s) 553, 920, 1519
CfoI GCGC 1 cut(s) 1365
Cfr13I GGNCC 2 cut(s) 372, 1028
Csp6I GTAC 5 cut(s) 163, 560, 577, 870, 1100
CviAII CATG 7 cut(s) 126, 319, 671, 919, 1044, 1095, 1377
CviQI GTAC 5 cut(s) 163, 560, 577, 870, 1100
DdeI CTNAG 3 cut(s) 197, 303, 839
DpnI GATC 8 cut(s) 150, 241, 252, 482, 669, 784, 985, 1463
DpnII GATC 8 cut(s) 148, 239, 250, 480, 667, 782, 983, 1461
DraI TTTAAA 1 cut(s) 1428
EaeI YGGCCR 1 cut(s) 850
Eam1104I CTCTTC 5 cut(s) 2, 101, 1016, 1450, 1523
EarI CTCTTC 5 cut(s) 2, 101, 1016, 1450, 1523
EciI GGCGGA 1 cut(s) 372
Ecl136II GAGCTC 1 cut(s) 569
Eco130I CCWWGG 1 cut(s) 1161
Eco24I GRGCYC 1 cut(s) 571
Eco31I GGTCTC 1 cut(s) 833
Eco47I GGWCC 2 cut(s) 372, 1028
Eco53kI GAGCTC 1 cut(s) 569
Eco88I CYCGRG 1 cut(s) 1382
EcoICRI GAGCTC 1 cut(s) 569
EcoRI GAATTC 2 cut(s) 948, 1544
EcoRII CCWGG 2 cut(s) 37, 350
EcoT14I CCWWGG 1 cut(s) 1161
EcoT22I ATGCAT 1 cut(s) 676
EcoT38I GRGCYC 1 cut(s) 571
ErhI CCWWGG 1 cut(s) 1161
FaeI CATG 7 cut(s) 129, 322, 674, 922, 1047, 1098, 1380
FaqI GGGAC 1 cut(s) 20
FatI CATG 7 cut(s) 125, 318, 670, 918, 1043, 1094, 1376
FauI CCCGC 1 cut(s) 371
FbaI TGATCA 1 cut(s) 667
Fnu4HI GCNGC 5 cut(s) 75, 225, 992, 1187, 1486
FokI GGATG 5 cut(s) 332, 530, 1049, 1250, 1348
FriOI GRGCYC 1 cut(s) 571
Fsp4HI GCNGC 5 cut(s) 75, 225, 992, 1187, 1486
FspAI RTGCGCAY 1 cut(s) 1364
FspBI CTAG 3 cut(s) 21, 981, 1603
FspI TGCGCA 1 cut(s) 1364
GlaI GCGC 1 cut(s) 1364
GluI GCNGC 5 cut(s) 75, 225, 992, 1187, 1486
GsuI CTGGAG 1 cut(s) 845
HaeIII GGCC 1 cut(s) 852
HhaI GCGC 1 cut(s) 1365
Hin1II CATG 7 cut(s) 129, 322, 674, 922, 1047, 1098, 1380
Hin6I GCGC 1 cut(s) 1363
HinP1I GCGC 1 cut(s) 1363
HincII GTYRAC 1 cut(s) 178
HindII GTYRAC 1 cut(s) 178
HinfI GANTC 1 cut(s) 42
HpaI GTTAAC 1 cut(s) 178
HphI GGTGA 2 cut(s) 1403, 1429
Hpy166II GTNNAC 4 cut(s) 178, 268, 644, 1100
Hpy188I TCNGA 7 cut(s) 200, 480, 680, 942, 1450, 1543, 1591
Hpy188III TCNNGA 8 cut(s) 862, 1031, 1124, 1138, 1313, 1382, 1384, 1549
Hpy8I GTNNAC 4 cut(s) 178, 268, 644, 1100
HpyAV CCTTC 2 cut(s) 104, 550
HpyCH4III ACNGT 4 cut(s) 512, 662, 815, 1585
HpyCH4IV ACGT 1 cut(s) 726
HpyF10VI GCNNNNNNNGC 2 cut(s) 849, 1362
HpyF3I CTNAG 3 cut(s) 197, 303, 839
HpySE526I ACGT 1 cut(s) 726
Hsp92II CATG 7 cut(s) 129, 322, 674, 922, 1047, 1098, 1380
HspAI GCGC 1 cut(s) 1363
Ksp22I TGATCA 1 cut(s) 667
KspAI GTTAAC 1 cut(s) 178
Kzo9I GATC 8 cut(s) 148, 239, 250, 480, 667, 782, 983, 1461
LguI GCTCTTC 2 cut(s) 2, 1523
LmnI GCTCC 1 cut(s) 566
Lsp1109I GCAGC 4 cut(s) 61, 211, 1003, 1497
LweI GCATC 6 cut(s) 748, 1049, 1071, 1198, 1326, 1546
MaeI CTAG 3 cut(s) 21, 981, 1603
MaeII ACGT 1 cut(s) 726
MaeIII GTNAC 5 cut(s) 339, 727, 1047, 1391, 1435
MalI GATC 8 cut(s) 150, 241, 252, 482, 669, 784, 985, 1463
MbiI CCGCTC 1 cut(s) 519
MboI GATC 8 cut(s) 148, 239, 250, 480, 667, 782, 983, 1461
MfeI CAATTG 2 cut(s) 1326, 1595
MflI RGATCY 3 cut(s) 148, 250, 480
MhlI GDGCHC 1 cut(s) 571
MlsI TGGCCA 1 cut(s) 852
MluNI TGGCCA 1 cut(s) 852
MmeI TCCRAC 1 cut(s) 951
Mox20I TGGCCA 1 cut(s) 852
Mph1103I ATGCAT 1 cut(s) 676
MroXI GAANNNNTTC 2 cut(s) 89, 1410
MscI TGGCCA 1 cut(s) 852
MseI TTAA 6 cut(s) 177, 504, 932, 1275, 1427, 1479
MslI CAYNNNNRTG 1 cut(s) 1056
Msp20I TGGCCA 1 cut(s) 852
MspA1I CMGCKG 1 cut(s) 378
MspCI CTTAAG 2 cut(s) 503, 1274
MspR9I CCNGG 2 cut(s) 39, 352
MunI CAATTG 2 cut(s) 1326, 1595
Mva1269I GAATGC 1 cut(s) 674
MvaI CCWGG 2 cut(s) 39, 352
MwoI GCNNNNNNNGC 2 cut(s) 849, 1362
NdeII GATC 8 cut(s) 148, 239, 250, 480, 667, 782, 983, 1461
NlaIII CATG 7 cut(s) 129, 322, 674, 922, 1047, 1098, 1380
NlaIV GGNNCC 2 cut(s) 26, 150
NmuCI GTSAC 3 cut(s) 339, 1391, 1435
NsbI TGCGCA 1 cut(s) 1364
NsiI ATGCAT 1 cut(s) 676
NspI RCATGY 2 cut(s) 922, 1098
PaeI GCATGC 1 cut(s) 922
PaeR7I CTCGAG 1 cut(s) 1382
PasI CCCWGGG 1 cut(s) 351
PciI ACATGT 1 cut(s) 1094
PciSI GCTCTTC 2 cut(s) 2, 1523
PctI GAATGC 1 cut(s) 674
PdmI GAANNNNTTC 2 cut(s) 89, 1410
PfeI GAWTC 1 cut(s) 42
PkrI GCNGC 5 cut(s) 76, 226, 993, 1188, 1487
PscI ACATGT 1 cut(s) 1094
PsiI TTATAA 1 cut(s) 695
Psp124BI GAGCTC 1 cut(s) 571
Psp6I CCWGG 2 cut(s) 37, 350
PspGI CCWGG 2 cut(s) 37, 350
PspN4I GGNNCC 2 cut(s) 26, 150
PspPI GGNCC 2 cut(s) 372, 1028
PstI CTGCAG 1 cut(s) 957
PsuI RGATCY 3 cut(s) 148, 250, 480
RsaI GTAC 5 cut(s) 164, 561, 578, 871, 1101
RsaNI GTAC 5 cut(s) 163, 560, 577, 870, 1100
RseI CAYNNNNRTG 1 cut(s) 1056
SacI GAGCTC 1 cut(s) 571
SapI GCTCTTC 2 cut(s) 2, 1523
SaqAI TTAA 6 cut(s) 177, 504, 932, 1275, 1427, 1479
SatI GCNGC 5 cut(s) 75, 225, 992, 1187, 1486
Sau3AI GATC 8 cut(s) 148, 239, 250, 480, 667, 782, 983, 1461
Sau96I GGNCC 2 cut(s) 372, 1028
ScrFI CCNGG 2 cut(s) 39, 352
SduI GDGCHC 1 cut(s) 571
SfaNI GCATC 6 cut(s) 748, 1049, 1071, 1198, 1326, 1546
SfcI CTRYAG 3 cut(s) 171, 953, 1288
Sfr274I CTCGAG 1 cut(s) 1382
SinI GGWCC 2 cut(s) 372, 1028
SlaI CTCGAG 1 cut(s) 1382
SmiMI CAYNNNNRTG 1 cut(s) 1056
SmlI CTYRAG 3 cut(s) 503, 1274, 1382
SmoI CTYRAG 3 cut(s) 503, 1274, 1382
SphI GCATGC 1 cut(s) 922
SsiI CCGC 4 cut(s) 357, 378, 517, 1186
SspMI CTAG 3 cut(s) 21, 981, 1603
SstI GAGCTC 1 cut(s) 571
StyD4I CCNGG 2 cut(s) 37, 350
StyI CCWWGG 1 cut(s) 1161
TaaI ACNGT 4 cut(s) 512, 662, 815, 1585
TaiI ACGT 1 cut(s) 729
TaqI TCGA 4 cut(s) 625, 1137, 1383, 1563
TatI WGTACW 3 cut(s) 162, 559, 1099
TauI GCSGC 1 cut(s) 1189
TfiI GAWTC 1 cut(s) 42
Tru1I TTAA 6 cut(s) 177, 504, 932, 1275, 1427, 1479
Tru9I TTAA 6 cut(s) 177, 504, 932, 1275, 1427, 1479
TscAI CASTG 4 cut(s) 818, 1227, 1263, 1588
TseFI GTSAC 3 cut(s) 339, 1391, 1435
TseI GCWGC 4 cut(s) 74, 224, 991, 1485
Tsp45I GTSAC 3 cut(s) 339, 1391, 1435
TspDTI ATGAA 8 cut(s) 203, 233, 532, 1022, 1091, 1254, 1333, 1501
TspGWI ACGGA 2 cut(s) 821, 1416
TspRI CASTG 4 cut(s) 818, 1227, 1263, 1588
Vha464I CTTAAG 2 cut(s) 503, 1274
VpaK11BI GGWCC 2 cut(s) 372, 1028
XapI RAATTY 3 cut(s) 530, 948, 1544
XceI RCATGY 2 cut(s) 922, 1098
XhoI CTCGAG 1 cut(s) 1382
XmnI GAANNNNTTC 2 cut(s) 89, 1410
XspI CTAG 3 cut(s) 21, 981, 1603
Zsp2I ATGCAT 1 cut(s) 676
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.