Rorug01G0228600

Cyclic nucleotide-gated ion channel 1-like

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
Physical Location & Seq
Forward (+)
32945603 .. 32950052
4450 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0228600.1

Sequence Viewer

Length: 2991 bp
ATGGCTGAAGGTGTTGTTACTGTTGTGGCTGAAGGGATCAAGCCCCTGGGAGATTTCATCATTCAGCAAGCGAAGTTCTTGAGTGGAGTCAGCTATCAAGTTGAGCTTGCACAAGTTGAACTTCACTTGATCCGGGGCTTTCTCAGAGATGCAGATGCAAGACAAGGAGACGAAGAAGTAGTACGCATTTGGGTTAAACTGATTAGAGATGCTGCTTATGACTTGGAGGATATCATTGAATCTTTTGCCTTGAAAGTAGCTTCCAGGAGGAGAGGAGGTACTGTCAAGATTGCTCTCAAAAGGTTTGCCAGCATCTTTAATGAAGGAGTTAATCGATACAAGATTGGGTCCGAAATTGAGGATATTATAACCAAACTTTCTCATCTGAGGTCGAGTTTGCTGAGTTATAATATCAGGCAAATAAGTGGGGGTGAAGGTGTCGCTTCTTCTTTTAAGAGGCAAAGAGACCGGCGGCTAACTTACGCTCATGAAGTTGAAAGTCATACTGTTGGCTTAGAGGAAAACACAGATATATTGGTTAAGGAGTTGGTGGGAGAAGGAAAGCGTCACCGTGTTGTTTCTATTTGGGGGATGGGCGGCTCCGGAAAAACCACTCTTGCAAAACAAGTTTTTCGTCAAAATGAGGTGAAACGTCATTTTGATTGTTTCGCTTGGATTTGTATATCTCAACAATGTGAAGGCAGAGATGTCTTCGAAGAAATTTTAATTAAACTCACTTCCCCAACAATAGAGAAAAGGAAAGAAATTTCCAAAATGAAAAAGGATGAAATAGCAATGGAGGTCTGTAGTATCCAACTAGAAAAGAGATGTCTGGTGGTCCTTGATGACATATGGACTCAAGAGGCTTGGCATTCGATAAAAGCTGGATTCCCAATCAATGAGGAAACAGAGAGCCGAATATTACTCACTACTCGCAAGAAAGAAGTAGCCTCACTTGCATCCAAAAATGATAATCTCCACCAACCTCGACCACTAGATGACAACCAAAGCTGGGAACTGTTTGAAAATATAGCGGAATGTGGAAGCGATAAAACAGACTTGGAAATTTATGCAAAGAAGAGAGAATTAGGAAAGAAGATGCTTGTACATTGTTCAGGTTTACCATTAGCCATCAGTGTGCTTGCTGGTCTTCTTAGTAGACGAGAGACGGTTGATGAGTGGGATACGGTACTTAGAAATGTTGATGTATACATAATGAGAGGCACAAATGTCCTTGAAAGAGAAAAGACAGGTCAGGGGTGTGGTGTTTCAGGTGTCTTGGCATTGAGTTATGATGACTTACCATCTCACTTAAAACTATGCTTTTTGTATTTAGCCCAATTTCCTGAGGATCATGAGATACGGGTAAAAAGACTTGCTCAATTATGGATTGCAGAAGGGTTTATAACTTCAACGTCAGAAATGCATGTTTCAGTGGAAAGTTTGGAAGAAATGTCATATAGTTGCTTAGTTGAATTGGTGGAGAGATCTATGGTTCAAGTTGTAGAATATGGTTTAAGTGGGAAGGTGAAAACTTGCCGTCTCCATGATTTTATGAGAGACTTGTGCTTGCGAAAGGCAGAAGAGGAGAATTTTTTCCGAATTATTAACTTTTCTGCGGGACTGGTATCTAAGACAGCCCTAATTGGCAAGGTTCGAAGACTTGCCCTCTATTTGGACGAAGATGTGAAATATGATTTCAGTATAGATGGAAGAGATGAGCACATTAGGTCTCTATTATACTTTACCCCAAAAGGGTTTGACCAAAAGTGGAACAAAAAAGTAATGCGATCAGTATTCAATGACTTCAAATTGCTTAGAGTTCTGAAGTTTGAAAAAATAGAGAGAGAATTTCAGTTACCGAAAACGATTGGGAATCTAGTCCACTTGAGGTTTCTGAGTCTGAAGCATAGTGCATATAGTGGGTTGCCATCATCTGTATCTAATCTAGTACTTTTGCAAACTCTAGATCTGCGGTATAATTATTATTTATATGAAGGATCTTGTTTTGGTCGGGAGAGGGCAACCAGAATCAGAAATGTGTTTTGGAATATGGAGCAACTGAGGCACTTATATTTACCTTGGCGTCACTATATAAGTGAACAGAAACTCTCATTTGCAAGGCTGTGCAATTTGCAGACGTTGGGTGATCTTCCAATTGAGAAATGTGAGTTAAATGATCTTGTTCAGTTAAGCAATCTGAAGAAAATATCCATAATCGTATCACAGCCTAGTCACTTGGAAAAGTTCAAGAACATGTTGATATCGAGAAGTATAACATATGAGCATCTTCGATCGCTATCTTTGAAGCTAAACCGAGATGATAATGAGGATATAGCAAGAGATATAGTGTTAAGGTGTCCTTATTTATACAAACTGCGACTGCTTGGGAAAATGACGGAGTTTCCAAAAGAGCTCCTGGGCTATCCAAAACTCACCAAGATAACGCTGGTTAGTACAGAACTGAGATGTGACCAGATAGATATAGTGAAGATGCTGCCCAAGTTAAGGGTGCTTTACCTGGGTAGTGATGCTTTCAAATCAAAAACAATGGTTTTCTCCCCAGGAGGCTTTCCTCATCTGGAATTTCTTACACTAAGTGCTTTGTTTATGTTGAACGAGTGGAGGGTGGAGAAAGAAGCCATGCCTAGTCTTCAGAGATTGCATATTGAATGGTGCCTACAATTATGGGAAGTTCCAGATGGGCTTCAACATATTACTACCCTCAAGGAATTAACAATCAACGTGATGACCAGTAGATTCTGCAGTAGGGTTAGGGAAGGAGGAGAGGATTTCTACAAAATTAAACATGTACCTTCTATTATAATCACAAATATTCAACCCGACTACAAGAAAGACAAGGAGCCAGAAATGGAGGAAGCAGCAGGTGCGTGTCGAGTAGTTGCTAATGACTCTGAGAAATCAACTGTGGACGCTCCTCTGCCCCCTGAAGAAAAAACAGAGGAAATACAAGCTGCATCCACTCCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

996

Amino Acids

114.56

Weight (kDa)

7.74

Isoelectric Point (pI)

47.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 13 - 91 4.2e-19 Rx N-terminal domain
NB-ARC PF00931 175 - 345 1.9e-42 NB-ARC domain
WHD_DRP PF23559 448 - 523 6.6e-18 Disease resistance protein Winged helix domain
LRR_14 PF23598 593 - 919 5.4e-32 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000017)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07351 FvH4_1g11800 FvH4_1g11800 FvH4_1g11800 FvH4_1g11800 FvH4_1g11800 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_4g14360 FvH4_6g13561 FvH4_6g13562 FvH4_6g13580 FvH4_6g13590 FvH4_6g13590 FvH4_6g13590 FvH4_6g13731 FvH4_6g13770 FvH4_6g13800 FvH4_6g13800 FvH4_6g13860 FvH4_6g13870 FvH4_6g13870 FvH4_6g13870 FvH4_6g13870 FvH4_6g13870 FvH4_6g13890 FvH4_6g33801 FvH4_7g13020 FvH4_7g13270 FvH4_7g13270 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g14580 FvH4_7g14580 FvH4_7g14580 FvH4_7g14600 FvH4_7g14600 FvH4_7g20030 FvH4_7g20510 FvH4_7g20510 FvH4_7g20510 FvH4_7g20670 FvH4_7g20670 FvH4_7g20670 FvH4_7g20670 FvH4_7g20690 FvH4_7g20690 FvH4_7g31930 FvH4_7g31930 FvH4_7g31940 FvH4_7g31940
malus_domestica MD01G1115700.v1.1 MD01G1115800.v1.1 MD01G1116600.v1.1 MD01G1116700.v1.1 MD01G1117000.v1.1 MD01G1225000.v1.1 MD02G1077900.v1.1 MD02G1078000.v1.1 MD02G1078200.v1.1 MD02G1078400.v1.1 MD02G1084300.v1.1 MD04G1004700.v1.1 MD04G1123100.v1.1 MD04G1123200.v1.1 MD04G1128000.v1.1 MD04G1128400.v1.1 MD05G1299700.v1.1 MD05G1300000.v1.1 MD07G1184000.v1.1 MD07G1292300.v1.1 MD08G1214800.v1.1
prunus_persica Prupe.1G205100_v2.0.a1 Prupe.1G205100_v2.0.a1 Prupe.1G205200_v2.0.a1 Prupe.2G222300_v2.0.a1 Prupe.2G223300_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223600_v2.0.a1 Prupe.2G223600_v2.0.a1 Prupe.2G223600_v2.0.a1 Prupe.2G223700_v2.0.a1 Prupe.2G223700_v2.0.a1 Prupe.2G223700_v2.0.a1 Prupe.2G223700_v2.0.a1 Prupe.2G223800_v2.0.a1 Prupe.2G223900_v2.0.a1 Prupe.2G224000_v2.0.a1 Prupe.5G162000_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G291000_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G210400_v2.0.a1 Prupe.7G210600_v2.0.a1 Prupe.7G210700_v2.0.a1 Prupe.7G210800_v2.0.a1 Prupe.7G210900_v2.0.a1 Prupe.8G097600_v2.0.a1 Prupe.8G097800_v2.0.a1 Prupe.8G097800_v2.0.a1
pyrus_communis pycom01g14430 pycom01g14440 pycom01g23130 pycom01g23160 pycom01g23330 pycom02g06210 pycom02g06220 pycom02g06250 pycom02g06270 pycom02g06710 pycom03g05360 pycom03g05380 pycom04g11470 pycom04g11480 pycom04g11520 pycom04g11560 pycom04g11600 pycom04g11610 pycom04g11650 pycom04g11660 pycom04g11670 pycom05g27790 pycom07g17630 pycom08g20960 pycom126g00020 pycom126g00030
rosa_chinensis RchiOBHm_Chr1g0318251 RchiOBHm_Chr1g0318731 RchiOBHm_Chr1g0339101 RchiOBHm_Chr1g0339111 RchiOBHm_Chr1g0347151 RchiOBHm_Chr1g0347161 RchiOBHm_Chr1g0347221 RchiOBHm_Chr1g0352401 RchiOBHm_Chr1g0352441 RchiOBHm_Chr1g0352461 RchiOBHm_Chr1g0356131 RchiOBHm_Chr1g0363991 RchiOBHm_Chr1g0364791 RchiOBHm_Chr1g0364801 RchiOBHm_Chr1g0364811 RchiOBHm_Chr1g0364851 RchiOBHm_Chr1g0364951 RchiOBHm_Chr1g0370821 RchiOBHm_Chr1g0381221 RchiOBHm_Chr1g0381231 RchiOBHm_Chr1g0381261 RchiOBHm_Chr1g0381271 RchiOBHm_Chr1g0381341 RchiOBHm_Chr1g0381351 RchiOBHm_Chr1g0381391 RchiOBHm_Chr1g0381801 RchiOBHm_Chr1g0381821 RchiOBHm_Chr2g0093241 RchiOBHm_Chr2g0116391 RchiOBHm_Chr3g0466441 RchiOBHm_Chr3g0466631 RchiOBHm_Chr3g0466651 RchiOBHm_Chr3g0496921 RchiOBHm_Chr4g0400441 RchiOBHm_Chr4g0400501 RchiOBHm_Chr4g0400511 RchiOBHm_Chr4g0400691 RchiOBHm_Chr4g0400701 RchiOBHm_Chr4g0404331 RchiOBHm_Chr5g0052101 RchiOBHm_Chr5g0052111 RchiOBHm_Chr5g0052171 RchiOBHm_Chr5g0052181 RchiOBHm_Chr6g0264161 RchiOBHm_Chr6g0265551 RchiOBHm_Chr7g0213571 RchiOBHm_Chr7g0213581
rosa_laevigata RLG00000002796 RLG00000003261 RLG00000007935 RLG00000007936 RLG00000009187 RLG00000014179 RLG00000016381 RLG00000018265 RLG00000024558 RLG00000024574 RLG00000026232 RLG00000026234 RLG00000026236 RLG00000026237 RLG00000027459 RLG00000027461 RLG00000027463 RLG00000027530 RLG00000028103 RLG00000028304 RLG00000028333 RLG00000029214 RLG00000029848 RLG00000029951 RLG00000030115 RLG00000030552 RLG00000033668 RLG00000034840 RLG00000034841 RLG00000034842 RLG00000035830
rosa_multiflora Rmu_sc0000654.1_g000004 Rmu_sc0000675.1_g000025 Rmu_sc0001075.1_g000002 Rmu_sc0001726.1_g000004 Rmu_sc0001772.1_g000061 Rmu_sc0001772.1_g000065 Rmu_sc0002067.1_g000002 Rmu_sc0002183.1_g000001 Rmu_sc0002183.1_g000006 Rmu_sc0002244.1_g000003 Rmu_sc0002313.1_g000004 Rmu_sc0002319.1_g000004 Rmu_sc0002539.1_g000085 Rmu_sc0002636.1_g000004 Rmu_sc0003229.1_g000007 Rmu_sc0003313.1_g000020 Rmu_sc0003546.1_g000007 Rmu_sc0003724.1_g000015 Rmu_sc0003936.1_g000029 Rmu_sc0004191.1_g000067 Rmu_sc0004525.1_g000012 Rmu_sc0005122.1_g000009 Rmu_sc0005255.1_g000040 Rmu_sc0005338.1_g000016 Rmu_sc0005584.1_g000008 Rmu_sc0006460.1_g000013 Rmu_sc0006872.1_g000011 Rmu_sc0006872.1_g000015 Rmu_sc0006872.1_g000016 Rmu_sc0006952.1_g000013 Rmu_sc0007342.1_g000005 Rmu_sc0007342.1_g000006 Rmu_sc0008418.1_g000003 Rmu_sc0008418.1_g000006 Rmu_sc0008636.1_g000007 Rmu_sc0008636.1_g000008 Rmu_sc0009205.1_g000014 Rmu_sc0009365.1_g000014 Rmu_sc0009917.1_g000002 Rmu_sc0019289.1_g000003 Rmu_ssc0000098.1_g000011 Rmu_ssc0000098.1_g000012 Rmu_ssc0000167.1_g000018 Rmu_ssc0000167.1_g000024 Rmu_ssc0000326.1_g000015
rosa_roxburghii Rroxscaffold_166G00440780 Rroxscaffold_176G00431500 Rroxscaffold_1G00015080 Rroxscaffold_1G00027880 Rroxscaffold_1G00027890 Rroxscaffold_1G00027920 Rroxscaffold_2G00127250 Rroxscaffold_2G00148380 Rroxscaffold_3G00219450 Rroxscaffold_3G00232170 Rroxscaffold_3G00232210 Rroxscaffold_3G00242230 Rroxscaffold_3G00242240 Rroxscaffold_3G00244790 Rroxscaffold_3G00245790 Rroxscaffold_4G00278400 Rroxscaffold_4G00278430 Rroxscaffold_4G00278670 Rroxscaffold_4G00278680 Rroxscaffold_4G00278690 Rroxscaffold_4G00278700 Rroxscaffold_4G00278720 Rroxscaffold_4G00291690 Rroxscaffold_4G00292070 Rroxscaffold_4G00292090 Rroxscaffold_4G00292770 Rroxscaffold_4G00302240 Rroxscaffold_4G00302860 Rroxscaffold_4G00311320 Rroxscaffold_4G00311330 Rroxscaffold_4G00320570 Rroxscaffold_4G00322050 Rroxscaffold_4G00329480 Rroxscaffold_4G00329730 Rroxscaffold_5G00345500 Rroxscaffold_5G00345510 Rroxscaffold_5G00360830 Rroxscaffold_5G00360840 Rroxscaffold_6G00393450 Rroxscaffold_6G00404030 Rroxscaffold_6G00414220 Rroxscaffold_6G00414230 Rroxscaffold_6G00414280 Rroxscaffold_6G00414290 Rroxscaffold_6G00414350 Rroxscaffold_6G00414470 Rroxscaffold_7G00202570 Rroxscaffold_7G00203460 Rroxscaffold_7G00203470
rosa_rugosa Rorug01G0020500 Rorug01G0020600 Rorug01G0020700 Rorug01G0143700.1 Rorug01G0225700 Rorug01G0228500 Rorug01G0228600 Rorug01G0228600 Rorug01G0228700 Rorug01G0228800 Rorug01G0228800 Rorug01G0229000 Rorug01G0229300 Rorug01G0229400 Rorug01G0229600 Rorug01G0229700 Rorug01G0232200 Rorug01G0232600 Rorug01G0232600 Rorug01G0311900 Rorug01G0311900 Rorug01G0318400 Rorug01G0318500 Rorug01G0318500 Rorug01G0318500 Rorug01G0427900 Rorug01G0427900 Rorug01G0428000 Rorug01G0428200 Rorug01G0428300 Rorug01G0428400 Rorug01G0431500 Rorug01G0431600 Rorug01G0431600 Rorug02G0033800 Rorug02G0206300 Rorug03G0081900 Rorug03G0083200 Rorug03G0083200 Rorug03G0083300 Rorug04G0025100 Rorug04G0025100 Rorug04G0025200 Rorug04G0025300 Rorug04G0058600 Rorug04G0058700 Rorug04G0058800 Rorug04G0098400 Rorug04G0098500 Rorug05G0274500 Rorug05G0274600 Rorug05G0274800 Rorug06G0008500 Rorug06G0009100 Rorug06G0018000
rosa_samantha Rh1AG031700 Rh1AG036100 Rh1AG089800 Rh1AG239800 Rh1AG239900 Rh1AG242000 Rh1AG242300 Rh1AG245600 Rh1AG262600 Rh1AG319700 Rh1AG319800 Rh1AG319900 Rh1AG327200 Rh1AG451100 Rh1AG451200 Rh1AG451300 Rh1AG451600 Rh1AG451700 Rh1BG027200 Rh1BG071600 Rh1BG090700 Rh1BG211000 Rh1BG213000 Rh1BG213500 Rh1BG282800 Rh1BG288400 Rh1BG408100 Rh1BG408200 Rh1BG408400 Rh1BG408700 Rh1CG026300 Rh1CG028300 Rh1CG224100 Rh1CG226000 Rh1CG226100 Rh1CG229300 Rh1CG229400 Rh1CG245900 Rh1CG299200 Rh1CG299400 Rh1CG299500 Rh1CG303300 Rh1CG305100 Rh1CG422500 Rh1CG422600 Rh1CG422700 Rh1CG422800 Rh1CG422900 Rh1CG423100 Rh1CG423300 Rh1CG423400 Rh1CG426300 Rh1CG426600 Rh1DG239300 Rh1DG239600 Rh1DG258300 Rh1DG314200 Rh1DG314300 Rh1DG314400 Rh1DG320000 Rh1DG439200 Rh1DG439400 Rh1DG439500 Rh1DG439700 Rh1DG440000 Rh1DG443800 Rh2AG261800 Rh2BG080900 Rh2CG083300 Rh2DG078900 Rh2DG270000 Rh2DG270100 Rh3AG128400 Rh3AG130100 Rh3AG130500 Rh3AG332500 Rh3AG332600 Rh3AG332800 Rh3BG149700 Rh3BG151500 Rh3CG151400 Rh3CG354500 Rh3CG366800 Rh3DG150500 Rh3DG152200 Rh4AG101400 Rh4AG102900 Rh4AG148300 Rh4AG148600 Rh4BG098000 Rh4CG111100 Rh4CG111300 Rh4CG155100 Rh4DG094800 Rh5AG213600 Rh5AG346900 Rh5AG347000 Rh5BG357500 Rh5BG357700 Rh5BG485400 Rh5CG383100 Rh5CG383200 Rh5CG383300 Rh5CG509900 Rh5DG373000 Rh5DG373200 Rh6BG054300 Rh6BG126300 Rh6CG125100 Rh6CG185300 Rh6DG177000 Rh7AG276100 Rh7AG276200 Rh7BG230500 Rh7BG270500 Rh7BG364000 Rh7CG250100 Rh7CG295200 Rh7CG295300 Rh7DG389700
rosa_wichuraiana Rw0G001190 Rw0G010680 Rw0G013360 Rw0G014310 Rw0G014890 Rw0G020310 Rw0G021350 Rw0G022510 Rw1G003360 Rw1G004330 Rw1G006930 Rw1G008310 Rw1G021090 Rw1G021150 Rw1G021210 Rw1G023200 Rw1G023210 Rw1G028340 Rw1G028350 Rw1G028990 Rw1G032510 Rw1G039370 Rw1G039400 Rw1G039410 Rw1G039420 Rw1G039430 Rw2G006700 Rw2G020550 Rw2G020580 Rw3G012130 Rw3G012300 Rw3G012310 Rw3G028220 Rw3G029230 Rw5G021600 Rw5G032790 Rw6G011240 Rw7G027670 Rw7G032780

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 4 cut(s) 368, 408, 1406, 2825
AarI CACCTGC 1 cut(s) 2876
Acc36I ACCTGC 1 cut(s) 2876
AccB1I GGYRCC 1 cut(s) 2676
AccI GTMKAC 2 cut(s) 1159, 1209
AccIII TCCGGA 1 cut(s) 602
AciI CCGC 5 cut(s) 472, 597, 1034, 1619, 1975
AclWI GGATC 4 cut(s) 44, 124, 1359, 2008
AcsI RAATTY 6 cut(s) 720, 765, 1065, 1591, 1850, 2585
AcuI CTGAAG 7 cut(s) 27, 51, 1847, 1925, 2222, 2639, 2970
AcyI GRCGYC 1 cut(s) 2086
AdeI CACNNNGTG 1 cut(s) 2600
AfaI GTAC 7 cut(s) 183, 280, 1107, 1191, 1953, 2458, 2814
AfiI CCNNNNNNNGG 4 cut(s) 1012, 1675, 1755, 2508
AflIII ACRYGT 2 cut(s) 2256, 2809
AjnI CCWGG 5 cut(s) 45, 263, 2418, 2520, 2563
AjuI GAANNNNNNNTTGG 2 cut(s) 2029, 2061
AluBI AGCT 8 cut(s) 93, 106, 260, 884, 1011, 2311, 2416, 2975
AluI AGCT 8 cut(s) 93, 106, 260, 884, 1011, 2311, 2416, 2975
Alw21I GWGCWC 2 cut(s) 1725, 2418
Alw26I GTCTC 6 cut(s) 162, 459, 1160, 1547, 1554, 1737
AlwI GGATC 4 cut(s) 44, 124, 1359, 2008
Aor13HI TCCGGA 1 cut(s) 602
ApeKI GCWGC 4 cut(s) 212, 2497, 2882, 2975
ApoI RAATTY 6 cut(s) 720, 765, 1065, 1591, 1850, 2585
Asp700I GAANNNNTTC 1 cut(s) 1595
AspS9I GGNCC 2 cut(s) 348, 838
AsuC2I CCSGG 1 cut(s) 134
AsuHPI GGTGA 6 cut(s) 443, 560, 658, 1540, 2159, 2428
AsuII TTCGAA 2 cut(s) 714, 1657
AvaII GGWCC 2 cut(s) 348, 838
AxyI CCTNAGG 1 cut(s) 1347
BanI GGYRCC 1 cut(s) 2676
BanII GRGCYC 1 cut(s) 2418
BarI GAAGNNNNNNTAC 2 cut(s) 165, 197
BbsI GAAGAC 4 cut(s) 703, 1142, 1666, 2645
Bbv12I GWGCWC 2 cut(s) 1725, 2418
BbvI GCAGC 4 cut(s) 199, 2484, 2894, 2962
BccI CCATC 6 cut(s) 586, 1139, 1312, 1703, 1939, 2696
BceAI ACGGC 1 cut(s) 1524
BciT130I CCWGG 5 cut(s) 47, 265, 2420, 2522, 2565
BciVI GTATCC 2 cut(s) 821, 1177
BcnI CCSGG 1 cut(s) 134
BcoDI GTCTC 6 cut(s) 162, 459, 1160, 1547, 1554, 1737
BfaI CTAG 7 cut(s) 818, 995, 1880, 1949, 1967, 2232, 2649
BfmI CTRYAG 2 cut(s) 805, 2764
BfuAI ACCTGC 1 cut(s) 2876
BfuI GTATCC 2 cut(s) 821, 1177
BglII AGATCT 2 cut(s) 1487, 1969
BisI GCNGC 6 cut(s) 213, 473, 598, 2498, 2883, 2976
BlsI GCNGC 6 cut(s) 214, 474, 599, 2499, 2884, 2977
BmcAI AGTACT 1 cut(s) 1953
Bme1390I CCNGG 6 cut(s) 47, 134, 265, 2420, 2522, 2565
Bme18I GGWCC 2 cut(s) 348, 838
BmgT120I GGNCC 2 cut(s) 348, 838
BmiI GGNNCC 4 cut(s) 349, 601, 2678, 2865
BmrFI CCNGG 6 cut(s) 47, 134, 265, 2420, 2522, 2565
BpiI GAAGAC 4 cut(s) 703, 1142, 1666, 2645
Bpu14I TTCGAA 2 cut(s) 714, 1657
BpuEI CTTGAG 4 cut(s) 100, 843, 1909, 2711
BpuMI CCSGG 1 cut(s) 134
Bsa29I ATCGAT 1 cut(s) 334
BsaBI GATNNNNATC 1 cut(s) 2299
BsaHI GRCGYC 1 cut(s) 2086
BsaI GGTCTC 2 cut(s) 459, 1737
BsaJI CCNNGG 7 cut(s) 45, 46, 133, 2081, 2419, 2521, 2563
BsaWI WCCGGW 1 cut(s) 602
BsaXI ACNNNNNCTCC 4 cut(s) 262, 267, 292, 297
Bsc4I CCNNNNNNNGG 4 cut(s) 1012, 1675, 1755, 2508
Bse118I RCCGGY 1 cut(s) 468
Bse1I ACTGG 2 cut(s) 1629, 2754
Bse21I CCTNAGG 1 cut(s) 1347
Bse3DI GCAATG 1 cut(s) 801
Bse8I GATNNNNATC 1 cut(s) 2299
BseAI TCCGGA 1 cut(s) 602
BseBI CCWGG 5 cut(s) 47, 265, 2420, 2522, 2565
BseCI ATCGAT 1 cut(s) 334
BseDI CCNNGG 7 cut(s) 45, 46, 133, 2081, 2419, 2521, 2563
BseGI GGATG 4 cut(s) 597, 790, 959, 2978
BseJI GATNNNNATC 1 cut(s) 2299
BseLI CCNNNNNNNGG 4 cut(s) 1012, 1675, 1755, 2508
BseMI GCAATG 1 cut(s) 801
BseMII CTCAG 8 cut(s) 157, 377, 392, 1338, 1889, 2054, 2456, 2907
BseNI ACTGG 2 cut(s) 1629, 2754
BseRI GAGGAG 5 cut(s) 283, 288, 1601, 2799, 2928
BseXI GCAGC 4 cut(s) 199, 2484, 2894, 2962
BseYI CCCAGC 1 cut(s) 1011
Bsh1285I CGRYCG 1 cut(s) 2297
BshNI GGYRCC 1 cut(s) 2676
BshVI ATCGAT 1 cut(s) 334
BsiEI CGRYCG 1 cut(s) 2297
BsiHKAI GWGCWC 2 cut(s) 1725, 2418
BsiSI CCGG 3 cut(s) 133, 469, 603
BslFI GGGAC 1 cut(s) 1635
BslI CCNNNNNNNGG 4 cut(s) 1012, 1675, 1755, 2508
BsmAI GTCTC 6 cut(s) 162, 459, 1160, 1547, 1554, 1737
BsmBI CGTCTC 3 cut(s) 162, 1160, 1547
BsmFI GGGAC 1 cut(s) 1635
BsmI GAATGC 1 cut(s) 871
Bso31I GGTCTC 2 cut(s) 459, 1737
Bsp119I TTCGAA 2 cut(s) 714, 1657
Bsp1286I GDGCHC 2 cut(s) 1725, 2418
Bsp13I TCCGGA 1 cut(s) 602
Bsp1407I TGTACA 1 cut(s) 1105
BspACI CCGC 5 cut(s) 472, 597, 1034, 1619, 1975
BspCNI CTCAG 8 cut(s) 156, 378, 393, 1339, 1890, 2055, 2457, 2908
BspDI ATCGAT 1 cut(s) 334
BspEI TCCGGA 1 cut(s) 602
BspHI TCATGA 2 cut(s) 487, 1354
BspLI GGNNCC 4 cut(s) 349, 601, 2678, 2865
BspMAI CTGCAG 1 cut(s) 2768
BspMI ACCTGC 1 cut(s) 2876
BspPI GGATC 4 cut(s) 44, 124, 1359, 2008
BspT104I TTCGAA 2 cut(s) 714, 1657
BspT107I GGYRCC 1 cut(s) 2676
BspTNI GGTCTC 2 cut(s) 459, 1737
BsrDI GCAATG 1 cut(s) 801
BsrFI RCCGGY 1 cut(s) 468
BsrGI TGTACA 1 cut(s) 1105
BsrI ACTGG 2 cut(s) 1629, 2754
BssAI RCCGGY 1 cut(s) 468
BssECI CCNNGG 7 cut(s) 45, 46, 133, 2081, 2419, 2521, 2563
BssNAI GTATAC 1 cut(s) 1210
BssNI GRCGYC 1 cut(s) 2086
BssT1I CCWWGG 1 cut(s) 2081
Bst1107I GTATAC 1 cut(s) 1210
Bst2UI CCWGG 5 cut(s) 47, 265, 2420, 2522, 2565
Bst4CI ACNGT 8 cut(s) 22, 283, 508, 572, 1020, 1171, 1189, 2929
Bst6I CTCTTC 3 cut(s) 1073, 1578, 1708
BstACI GRCGYC 1 cut(s) 2086
BstAPI GCANNNNNTGC 1 cut(s) 2888
BstAUI TGTACA 1 cut(s) 1105
BstBI TTCGAA 2 cut(s) 714, 1657
BstC8I GCNNGC 5 cut(s) 69, 108, 310, 1143, 1571
BstF5I GGATG 4 cut(s) 597, 790, 959, 2978
BstMAI GTCTC 6 cut(s) 162, 459, 1160, 1547, 1554, 1737
BstMCI CGRYCG 1 cut(s) 2297
BstMWI GCNNNNNNNGC 3 cut(s) 956, 2065, 2888
BstNI CCWGG 5 cut(s) 47, 265, 2420, 2522, 2565
BstNSI RCATGY 3 cut(s) 1430, 2260, 2813
BstSCI CCNGG 6 cut(s) 45, 132, 263, 2418, 2520, 2563
BstSFI CTRYAG 2 cut(s) 805, 2764
BstV1I GCAGC 4 cut(s) 199, 2484, 2894, 2962
BstV2I GAAGAC 4 cut(s) 703, 1142, 1666, 2645
BstX2I RGATCY 3 cut(s) 1487, 1969, 2000
BstYI RGATCY 3 cut(s) 1487, 1969, 2000
BstZ17I GTATAC 1 cut(s) 1210
Bsu15I ATCGAT 1 cut(s) 334
Bsu36I CCTNAGG 1 cut(s) 1347
BsuI GTATCC 2 cut(s) 821, 1177
BsuTUI ATCGAT 1 cut(s) 334
BtsCI GGATG 4 cut(s) 597, 790, 959, 2978
BtsIMutI CAGTG 2 cut(s) 1141, 1440
BveI ACCTGC 1 cut(s) 2876
Cac8I GCNNGC 5 cut(s) 69, 108, 310, 1143, 1571
CciI TCATGA 2 cut(s) 487, 1354
Cfr10I RCCGGY 1 cut(s) 468
Cfr13I GGNCC 2 cut(s) 348, 838
ClaI ATCGAT 1 cut(s) 334
CseI GACGC 3 cut(s) 554, 2075, 2942
Csp6I GTAC 7 cut(s) 182, 279, 1106, 1190, 1952, 2457, 2813
CviAII CATG 7 cut(s) 488, 1355, 1427, 1547, 2257, 2644, 2810
CviQI GTAC 7 cut(s) 182, 279, 1106, 1190, 1952, 2457, 2813
DraIII CACNNNGTG 1 cut(s) 2600
Eam1104I CTCTTC 3 cut(s) 1073, 1578, 1708
EarI CTCTTC 3 cut(s) 1073, 1578, 1708
Ecl136II GAGCTC 1 cut(s) 2416
Eco130I CCWWGG 1 cut(s) 2081
Eco24I GRGCYC 1 cut(s) 2418
Eco31I GGTCTC 2 cut(s) 459, 1737
Eco32I GATATC 2 cut(s) 232, 2265
Eco47I GGWCC 2 cut(s) 348, 838
Eco53kI GAGCTC 1 cut(s) 2416
Eco57I CTGAAG 7 cut(s) 27, 51, 1847, 1925, 2222, 2639, 2970
Eco81I CCTNAGG 1 cut(s) 1347
EcoICRI GAGCTC 1 cut(s) 2416
EcoRII CCWGG 5 cut(s) 45, 263, 2418, 2520, 2563
EcoRV GATATC 2 cut(s) 232, 2265
EcoT14I CCWWGG 1 cut(s) 2081
EcoT22I ATGCAT 1 cut(s) 1428
EcoT38I GRGCYC 1 cut(s) 2418
ErhI CCWWGG 1 cut(s) 2081
Esp3I CGTCTC 3 cut(s) 162, 1160, 1547
FaeI CATG 7 cut(s) 491, 1358, 1430, 1550, 2260, 2647, 2813
FalI AAGNNNNNCTT 6 cut(s) 90, 122, 105, 137, 2347, 2379
FaqI GGGAC 1 cut(s) 1635
FatI CATG 7 cut(s) 487, 1354, 1426, 1546, 2256, 2643, 2809
FauI CCCGC 1 cut(s) 1612
FauNDI CATATG 2 cut(s) 851, 2281
FblI GTMKAC 2 cut(s) 1159, 1209
Fnu4HI GCNGC 6 cut(s) 213, 473, 598, 2498, 2883, 2976
FokI GGATG 4 cut(s) 604, 797, 946, 2965
FriOI GRGCYC 1 cut(s) 2418
Fsp4HI GCNGC 6 cut(s) 213, 473, 598, 2498, 2883, 2976
FspBI CTAG 7 cut(s) 818, 995, 1880, 1949, 1967, 2232, 2649
GluI GCNGC 6 cut(s) 213, 473, 598, 2498, 2883, 2976
GsaI CCCAGC 1 cut(s) 1015
HapII CCGG 3 cut(s) 133, 469, 603
HgaI GACGC 3 cut(s) 554, 2075, 2942
Hin1I GRCGYC 1 cut(s) 2086
Hin1II CATG 7 cut(s) 491, 1358, 1430, 1550, 2260, 2647, 2813
HinfI GANTC 9 cut(s) 87, 239, 856, 888, 1876, 1900, 2031, 2760, 2912
HpaII CCGG 3 cut(s) 133, 469, 603
HphI GGTGA 6 cut(s) 443, 560, 658, 1540, 2159, 2428
Hpy166II GTNNAC 6 cut(s) 1121, 1160, 1210, 1885, 2102, 2932
Hpy8I GTNNAC 6 cut(s) 1121, 1160, 1210, 1885, 2102, 2932
HpyCH4III ACNGT 8 cut(s) 22, 283, 508, 572, 1020, 1171, 1189, 2929
HpyCH4IV ACGT 4 cut(s) 652, 1415, 2141, 2745
HpyF10VI GCNNNNNNNGC 3 cut(s) 956, 2065, 2888
HpySE526I ACGT 4 cut(s) 652, 1415, 2141, 2745
Hsp92I GRCGYC 1 cut(s) 2086
Hsp92II CATG 7 cut(s) 491, 1358, 1430, 1550, 2260, 2647, 2813
Kpn2I TCCGGA 1 cut(s) 602
LmnI GCTCC 5 cut(s) 605, 2056, 2421, 2863, 2941
Lsp1109I GCAGC 4 cut(s) 199, 2484, 2894, 2962
MaeI CTAG 7 cut(s) 818, 995, 1880, 1949, 1967, 2232, 2649
MaeII ACGT 4 cut(s) 652, 1415, 2141, 2745
MaeIII GTNAC 6 cut(s) 16, 566, 1857, 2087, 2234, 2471
MfeI CAATTG 1 cut(s) 2157
MflI RGATCY 3 cut(s) 1487, 1969, 2000
MhlI GDGCHC 2 cut(s) 1725, 2418
MlyI GAGTC 4 cut(s) 96, 850, 1909, 2906
MmeI TCCRAC 1 cut(s) 838
Mph1103I ATGCAT 1 cut(s) 1428
MroI TCCGGA 1 cut(s) 602
MroXI GAANNNNTTC 1 cut(s) 1595
MslI CAYNNNNRTG 1 cut(s) 1136
MspI CCGG 3 cut(s) 133, 469, 603
MspR9I CCNGG 6 cut(s) 47, 134, 265, 2420, 2522, 2565
MunI CAATTG 1 cut(s) 2157
Mva1269I GAATGC 1 cut(s) 871
MvaI CCWGG 5 cut(s) 47, 265, 2420, 2522, 2565
MwoI GCNNNNNNNGC 3 cut(s) 956, 2065, 2888
NciI CCSGG 1 cut(s) 134
NdeI CATATG 2 cut(s) 851, 2281
NlaIII CATG 7 cut(s) 491, 1358, 1430, 1550, 2260, 2647, 2813
NlaIV GGNNCC 4 cut(s) 349, 601, 2678, 2865
NmuCI GTSAC 4 cut(s) 566, 2087, 2234, 2471
NsiI ATGCAT 1 cut(s) 1428
NspI RCATGY 3 cut(s) 1430, 2260, 2813
NspV TTCGAA 2 cut(s) 714, 1657
PacI TTAATTAA 1 cut(s) 729
PagI TCATGA 2 cut(s) 487, 1354
PaqCI CACCTGC 1 cut(s) 2876
PasI CCCWGGG 1 cut(s) 46
PciI ACATGT 2 cut(s) 2256, 2809
PctI GAATGC 1 cut(s) 871
PdmI GAANNNNTTC 1 cut(s) 1595
PfeI GAWTC 5 cut(s) 239, 888, 1876, 2031, 2760
PfoI TCCNGGA 1 cut(s) 263
PkrI GCNGC 6 cut(s) 214, 474, 599, 2499, 2884, 2977
Ple19I CGATCG 1 cut(s) 2297
PleI GAGTC 4 cut(s) 95, 850, 1908, 2906
PpsI GAGTC 4 cut(s) 95, 850, 1908, 2906
PscI ACATGT 2 cut(s) 2256, 2809
PsiI TTATAA 4 cut(s) 368, 408, 1406, 2825
Psp124BI GAGCTC 1 cut(s) 2418
Psp6I CCWGG 5 cut(s) 45, 263, 2418, 2520, 2563
PspFI CCCAGC 1 cut(s) 1011
PspGI CCWGG 5 cut(s) 45, 263, 2418, 2520, 2563
PspN4I GGNNCC 4 cut(s) 349, 601, 2678, 2865
PspPI GGNCC 2 cut(s) 348, 838
PstI CTGCAG 1 cut(s) 2768
PsuI RGATCY 3 cut(s) 1487, 1969, 2000
PvuI CGATCG 1 cut(s) 2297
RsaI GTAC 7 cut(s) 183, 280, 1107, 1191, 1953, 2458, 2814
RsaNI GTAC 7 cut(s) 182, 279, 1106, 1190, 1952, 2457, 2813
RseI CAYNNNNRTG 1 cut(s) 1136
SacI GAGCTC 1 cut(s) 2418
SatI GCNGC 6 cut(s) 213, 473, 598, 2498, 2883, 2976
Sau96I GGNCC 2 cut(s) 348, 838
ScaI AGTACT 1 cut(s) 1953
SchI GAGTC 4 cut(s) 96, 850, 1909, 2906
ScrFI CCNGG 6 cut(s) 47, 134, 265, 2420, 2522, 2565
SduI GDGCHC 2 cut(s) 1725, 2418
SfcI CTRYAG 2 cut(s) 805, 2764
SfuI TTCGAA 2 cut(s) 714, 1657
SinI GGWCC 2 cut(s) 348, 838
SmiMI CAYNNNNRTG 1 cut(s) 1136
SmlI CTYRAG 4 cut(s) 79, 858, 1888, 2726
SmoI CTYRAG 4 cut(s) 79, 858, 1888, 2726
SsiI CCGC 5 cut(s) 472, 597, 1034, 1619, 1975
SspI AATATT 2 cut(s) 921, 2836
SspMI CTAG 7 cut(s) 818, 995, 1880, 1949, 1967, 2232, 2649
SstI GAGCTC 1 cut(s) 2418
StyD4I CCNGG 6 cut(s) 45, 132, 263, 2418, 2520, 2563
StyI CCWWGG 1 cut(s) 2081
TaaI ACNGT 8 cut(s) 22, 283, 508, 572, 1020, 1171, 1189, 2929
TaiI ACGT 4 cut(s) 655, 1418, 2144, 2748
TaqI TCGA 9 cut(s) 334, 392, 714, 875, 988, 1657, 2267, 2293, 2896
TatI WGTACW 3 cut(s) 1105, 1951, 2456
TauI GCSGC 2 cut(s) 475, 600
TfiI GAWTC 5 cut(s) 239, 888, 1876, 2031, 2760
TscAI CASTG 2 cut(s) 1141, 1440
TseFI GTSAC 4 cut(s) 566, 2087, 2234, 2471
TseI GCWGC 4 cut(s) 212, 2497, 2882, 2975
Tsp45I GTSAC 4 cut(s) 566, 2087, 2234, 2471
TspDTI ATGAA 6 cut(s) 46, 336, 504, 791, 801, 2010
TspGWI ACGGA 1 cut(s) 2414
TspRI CASTG 2 cut(s) 1141, 1440
VpaK11BI GGWCC 2 cut(s) 348, 838
XapI RAATTY 6 cut(s) 720, 765, 1065, 1591, 1850, 2585
XbaI TCTAGA 1 cut(s) 1966
XceI RCATGY 3 cut(s) 1430, 2260, 2813
XcmI CCANNNNNNNNNTGG 1 cut(s) 2446
XmiI GTMKAC 2 cut(s) 1159, 1209
XmnI GAANNNNTTC 1 cut(s) 1595
XspI CTAG 7 cut(s) 818, 995, 1880, 1949, 1967, 2232, 2649
ZrmI AGTACT 1 cut(s) 1953
Zsp2I ATGCAT 1 cut(s) 1428
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.