Cyclic nucleotide-gated ion channel 1-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 1460 |
| AccB1I | GGYRCC | 1 cut(s) | 1460 |
| AccI | GTMKAC | 1 cut(s) | 1041 |
| AciI | CCGC | 3 cut(s) | 331, 433, 552 |
| AclWI | GGATC | 6 cut(s) | 185, 198, 776, 856, 1068, 1450 |
| AcsI | RAATTY | 5 cut(s) | 5, 713, 856, 1223, 1314 |
| AcuI | CTGAAG | 1 cut(s) | 1440 |
| AcvI | CACGTG | 1 cut(s) | 1018 |
| AdeI | CACNNNGTG | 1 cut(s) | 234 |
| AfaI | GTAC | 8 cut(s) | 483, 529, 556, 608, 644, 721, 1416, 1462 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 62, 1180 |
| AflIII | ACRYGT | 1 cut(s) | 1162 |
| AleI | CACNNNNGTG | 1 cut(s) | 1139 |
| AluBI | AGCT | 7 cut(s) | 269, 568, 1356, 1507, 1610, 1624, 1667 |
| AluI | AGCT | 7 cut(s) | 269, 568, 1356, 1507, 1610, 1624, 1667 |
| Alw26I | GTCTC | 2 cut(s) | 242, 1636 |
| AlwI | GGATC | 6 cut(s) | 185, 198, 776, 856, 1068, 1450 |
| AoxI | GGCC | 3 cut(s) | 322, 337, 1093 |
| ApaI | GGGCCC | 1 cut(s) | 341 |
| ApeKI | GCWGC | 2 cut(s) | 137, 874 |
| ApoI | RAATTY | 5 cut(s) | 5, 713, 856, 1223, 1314 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1578, 1610 |
| AseI | ATTAAT | 1 cut(s) | 1065 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 324 |
| Asp718I | GGTACC | 1 cut(s) | 1460 |
| AspS9I | GGNCC | 3 cut(s) | 337, 338, 543 |
| AsuHPI | GGTGA | 5 cut(s) | 155, 460, 941, 1411, 1651 |
| AvaII | GGWCC | 1 cut(s) | 543 |
| BaeGI | GKGCMC | 3 cut(s) | 110, 341, 776 |
| BamHI | GGATCC | 1 cut(s) | 190 |
| BanI | GGYRCC | 1 cut(s) | 1460 |
| BanII | GRGCYC | 2 cut(s) | 341, 440 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1340, 1372 |
| BauI | CACGAG | 2 cut(s) | 239, 498 |
| BbrPI | CACGTG | 1 cut(s) | 1018 |
| BbsI | GAAGAC | 2 cut(s) | 458, 1185 |
| BbvI | GCAGC | 2 cut(s) | 124, 861 |
| BccI | CCATC | 5 cut(s) | 175, 662, 942, 1114, 1472 |
| BceAI | ACGGC | 1 cut(s) | 35 |
| BciVI | GTATCC | 1 cut(s) | 554 |
| BcoDI | GTCTC | 2 cut(s) | 242, 1636 |
| BfaI | CTAG | 2 cut(s) | 305, 1208 |
| BfmI | CTRYAG | 3 cut(s) | 25, 777, 1342 |
| BfuI | GTATCC | 1 cut(s) | 554 |
| BglII | AGATCT | 1 cut(s) | 292 |
| BisI | GCNGC | 2 cut(s) | 138, 875 |
| BlsI | GCNGC | 2 cut(s) | 139, 876 |
| BmcAI | AGTACT | 1 cut(s) | 721 |
| Bme18I | GGWCC | 1 cut(s) | 543 |
| BmgT120I | GGNCC | 3 cut(s) | 337, 338, 543 |
| BmiI | GGNNCC | 6 cut(s) | 15, 192, 339, 439, 1377, 1462 |
| BmsI | GCATC | 2 cut(s) | 420, 814 |
| BpiI | GAAGAC | 2 cut(s) | 458, 1185 |
| BpuEI | CTTGAG | 2 cut(s) | 1250, 1349 |
| BsaAI | YACGTR | 2 cut(s) | 531, 1018 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1110 |
| BsaJI | CCNNGG | 3 cut(s) | 17, 925, 1276 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 635, 665, 1175, 1205 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 62, 1180 |
| Bse1I | ACTGG | 3 cut(s) | 95, 152, 936 |
| Bse3DI | GCAATG | 1 cut(s) | 1417 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1110 |
| BseDI | CCNNGG | 3 cut(s) | 17, 925, 1276 |
| BseGI | GGATG | 6 cut(s) | 52, 654, 713, 953, 1125, 1464 |
| BseJI | GATNNNNATC | 1 cut(s) | 1110 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 62, 1180 |
| BseMI | GCAATG | 1 cut(s) | 1417 |
| BseNI | ACTGG | 3 cut(s) | 95, 152, 936 |
| BseSI | GKGCMC | 3 cut(s) | 110, 341, 776 |
| BseXI | GCAGC | 2 cut(s) | 124, 861 |
| BsgI | GTGCAG | 2 cut(s) | 544, 1040 |
| BshFI | GGCC | 3 cut(s) | 324, 339, 1095 |
| BshNI | GGYRCC | 1 cut(s) | 1460 |
| BsiSI | CCGG | 1 cut(s) | 837 |
| BslFI | GGGAC | 2 cut(s) | 239, 1561 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 62, 1180 |
| BsmAI | GTCTC | 2 cut(s) | 242, 1636 |
| BsmFI | GGGAC | 2 cut(s) | 239, 1561 |
| BsmI | GAATGC | 1 cut(s) | 840 |
| BsnI | GGCC | 3 cut(s) | 324, 339, 1095 |
| Bsp120I | GGGCCC | 1 cut(s) | 337 |
| Bsp1286I | GDGCHC | 4 cut(s) | 110, 341, 440, 776 |
| Bsp19I | CCATGG | 1 cut(s) | 1276 |
| BspACI | CCGC | 3 cut(s) | 331, 433, 552 |
| BspANI | GGCC | 3 cut(s) | 324, 339, 1095 |
| BspLI | GGNNCC | 6 cut(s) | 15, 192, 339, 439, 1377, 1462 |
| BspPI | GGATC | 6 cut(s) | 185, 198, 776, 856, 1068, 1450 |
| BspQI | GCTCTTC | 1 cut(s) | 1518 |
| BspT107I | GGYRCC | 1 cut(s) | 1460 |
| BsrDI | GCAATG | 1 cut(s) | 1417 |
| BsrI | ACTGG | 3 cut(s) | 95, 152, 936 |
| BssECI | CCNNGG | 3 cut(s) | 17, 925, 1276 |
| BssSI | CACGAG | 2 cut(s) | 239, 498 |
| BssT1I | CCWWGG | 2 cut(s) | 925, 1276 |
| Bst2BI | CACGAG | 2 cut(s) | 239, 498 |
| Bst4CI | ACNGT | 6 cut(s) | 124, 357, 522, 996, 1570, 1615 |
| Bst6I | CTCTTC | 2 cut(s) | 1256, 1518 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 493 |
| BstBAI | YACGTR | 2 cut(s) | 531, 1018 |
| BstC8I | GCNNGC | 5 cut(s) | 366, 381, 619, 691, 989 |
| BstDEI | CTNAG | 3 cut(s) | 348, 412, 905 |
| BstDSI | CCRYGG | 2 cut(s) | 17, 1276 |
| BstEII | GGTNACC | 1 cut(s) | 503 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 60 |
| BstF5I | GGATG | 6 cut(s) | 52, 654, 713, 953, 1125, 1464 |
| BstMAI | GTCTC | 2 cut(s) | 242, 1636 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 493, 1330, 1607 |
| BstNSI | RCATGY | 1 cut(s) | 689 |
| BstPI | GGTNACC | 1 cut(s) | 503 |
| BstSFI | CTRYAG | 3 cut(s) | 25, 777, 1342 |
| BstSLI | GKGCMC | 3 cut(s) | 110, 341, 776 |
| BstV1I | GCAGC | 2 cut(s) | 124, 861 |
| BstV2I | GAAGAC | 2 cut(s) | 458, 1185 |
| BstX2I | RGATCY | 3 cut(s) | 190, 292, 781 |
| BstYI | RGATCY | 3 cut(s) | 190, 292, 781 |
| BsuI | GTATCC | 1 cut(s) | 554 |
| BsuRI | GGCC | 3 cut(s) | 324, 339, 1095 |
| BtgI | CCRYGG | 2 cut(s) | 17, 1276 |
| BtgZI | GCGATG | 1 cut(s) | 892 |
| BtsCI | GGATG | 6 cut(s) | 52, 654, 713, 953, 1125, 1464 |
| BtsIMutI | CAGTG | 3 cut(s) | 102, 120, 943 |
| Cac8I | GCNNGC | 5 cut(s) | 366, 381, 619, 691, 989 |
| Cfr13I | GGNCC | 3 cut(s) | 337, 338, 543 |
| CseI | GACGC | 2 cut(s) | 1251, 1313 |
| Csp6I | GTAC | 8 cut(s) | 482, 528, 555, 607, 643, 720, 1415, 1461 |
| CviAII | CATG | 9 cut(s) | 540, 686, 726, 1085, 1115, 1255, 1277, 1404, 1472 |
| CviQI | GTAC | 8 cut(s) | 482, 528, 555, 607, 643, 720, 1415, 1461 |
| DdeI | CTNAG | 3 cut(s) | 348, 412, 905 |
| DraIII | CACNNNGTG | 1 cut(s) | 234 |
| Eam1104I | CTCTTC | 2 cut(s) | 1256, 1518 |
| EarI | CTCTTC | 2 cut(s) | 1256, 1518 |
| EciI | GGCGGA | 1 cut(s) | 346 |
| Eco130I | CCWWGG | 2 cut(s) | 925, 1276 |
| Eco147I | AGGCCT | 1 cut(s) | 324 |
| Eco24I | GRGCYC | 2 cut(s) | 341, 440 |
| Eco47I | GGWCC | 1 cut(s) | 543 |
| Eco57I | CTGAAG | 1 cut(s) | 1440 |
| Eco72I | CACGTG | 1 cut(s) | 1018 |
| Eco91I | GGTNACC | 1 cut(s) | 503 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 60 |
| EcoO109I | RGGNCCY | 2 cut(s) | 337, 338 |
| EcoO65I | GGTNACC | 1 cut(s) | 503 |
| EcoT14I | CCWWGG | 2 cut(s) | 925, 1276 |
| EcoT38I | GRGCYC | 2 cut(s) | 341, 440 |
| ErhI | CCWWGG | 2 cut(s) | 925, 1276 |
| FaeI | CATG | 9 cut(s) | 543, 689, 729, 1088, 1118, 1258, 1280, 1407, 1475 |
| FaqI | GGGAC | 2 cut(s) | 239, 1561 |
| FatI | CATG | 9 cut(s) | 539, 685, 725, 1084, 1114, 1254, 1276, 1403, 1471 |
| FauI | CCCGC | 1 cut(s) | 426 |
| FauNDI | CATATG | 1 cut(s) | 943 |
| FblI | GTMKAC | 1 cut(s) | 1041 |
| Fnu4HI | GCNGC | 2 cut(s) | 138, 875 |
| FokI | GGATG | 6 cut(s) | 39, 641, 720, 960, 1132, 1451 |
| FriOI | GRGCYC | 2 cut(s) | 341, 440 |
| Fsp4HI | GCNGC | 2 cut(s) | 138, 875 |
| FspBI | CTAG | 2 cut(s) | 305, 1208 |
| GluI | GCNGC | 2 cut(s) | 138, 875 |
| HaeIII | GGCC | 3 cut(s) | 324, 339, 1095 |
| HapII | CCGG | 1 cut(s) | 837 |
| HgaI | GACGC | 2 cut(s) | 1251, 1313 |
| Hin1II | CATG | 9 cut(s) | 543, 689, 729, 1088, 1118, 1258, 1280, 1407, 1475 |
| HincII | GTYRAC | 1 cut(s) | 1168 |
| HindII | GTYRAC | 1 cut(s) | 1168 |
| HindIII | AAGCTT | 1 cut(s) | 566 |
| HinfI | GANTC | 2 cut(s) | 39, 1111 |
| HpaII | CCGG | 1 cut(s) | 837 |
| HphI | GGTGA | 5 cut(s) | 155, 460, 941, 1411, 1651 |
| Hpy166II | GTNNAC | 2 cut(s) | 1042, 1168 |
| Hpy188I | TCNGA | 6 cut(s) | 38, 426, 632, 1102, 1241, 1546 |
| Hpy188III | TCNNGA | 4 cut(s) | 821, 1267, 1328, 1367 |
| Hpy8I | GTNNAC | 2 cut(s) | 1042, 1168 |
| HpyAV | CCTTC | 6 cut(s) | 314, 328, 335, 454, 1030, 1342 |
| HpyCH4III | ACNGT | 6 cut(s) | 124, 357, 522, 996, 1570, 1615 |
| HpyCH4IV | ACGT | 3 cut(s) | 530, 1017, 1164 |
| HpyCH4V | TGCA | 7 cut(s) | 487, 525, 693, 941, 1021, 1033, 1234 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 493, 1330, 1607 |
| HpyF3I | CTNAG | 3 cut(s) | 348, 412, 905 |
| HpySE526I | ACGT | 3 cut(s) | 530, 1017, 1164 |
| Hsp92II | CATG | 9 cut(s) | 543, 689, 729, 1088, 1118, 1258, 1280, 1407, 1475 |
| KpnI | GGTACC | 1 cut(s) | 1464 |
| LguI | GCTCTTC | 1 cut(s) | 1518 |
| LmnI | GCTCC | 5 cut(s) | 19, 214, 443, 632, 1375 |
| Lsp1109I | GCAGC | 2 cut(s) | 124, 861 |
| LweI | GCATC | 2 cut(s) | 420, 814 |
| MaeI | CTAG | 2 cut(s) | 305, 1208 |
| MaeII | ACGT | 3 cut(s) | 530, 1017, 1164 |
| MaeIII | GTNAC | 4 cut(s) | 403, 503, 1013, 1399 |
| MfeI | CAATTG | 1 cut(s) | 369 |
| MflI | RGATCY | 3 cut(s) | 190, 292, 781 |
| MhlI | GDGCHC | 4 cut(s) | 110, 341, 440, 776 |
| MmeI | TCCRAC | 4 cut(s) | 465, 682, 1492, 1569 |
| MnlI | CCTC | 5 cut(s) | 204, 481, 494, 521, 1363 |
| MroXI | GAANNNNTTC | 1 cut(s) | 324 |
| MseI | TTAA | 6 cut(s) | 215, 584, 1053, 1065, 1284, 1690 |
| MslI | CAYNNNNRTG | 5 cut(s) | 868, 946, 1089, 1139, 1476 |
| MspI | CCGG | 1 cut(s) | 837 |
| MunI | CAATTG | 1 cut(s) | 369 |
| Mva1269I | GAATGC | 1 cut(s) | 840 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 493, 1330, 1607 |
| NcoI | CCATGG | 1 cut(s) | 1276 |
| NdeI | CATATG | 1 cut(s) | 943 |
| NlaIII | CATG | 9 cut(s) | 543, 689, 729, 1088, 1118, 1258, 1280, 1407, 1475 |
| NlaIV | GGNNCC | 6 cut(s) | 15, 192, 339, 439, 1377, 1462 |
| NmuCI | GTSAC | 2 cut(s) | 1013, 1399 |
| NspI | RCATGY | 1 cut(s) | 689 |
| OliI | CACNNNNGTG | 1 cut(s) | 1139 |
| PceI | AGGCCT | 1 cut(s) | 324 |
| PciSI | GCTCTTC | 1 cut(s) | 1518 |
| PctI | GAATGC | 1 cut(s) | 840 |
| PdmI | GAANNNNTTC | 1 cut(s) | 324 |
| PfeI | GAWTC | 2 cut(s) | 39, 1111 |
| PkrI | GCNGC | 2 cut(s) | 139, 876 |
| PmaCI | CACGTG | 1 cut(s) | 1018 |
| PmlI | CACGTG | 1 cut(s) | 1018 |
| Ppu21I | YACGTR | 2 cut(s) | 531, 1018 |
| PshBI | ATTAAT | 1 cut(s) | 1065 |
| PspCI | CACGTG | 1 cut(s) | 1018 |
| PspEI | GGTNACC | 1 cut(s) | 503 |
| PspN4I | GGNNCC | 6 cut(s) | 15, 192, 339, 439, 1377, 1462 |
| PspOMI | GGGCCC | 1 cut(s) | 337 |
| PspPI | GGNCC | 3 cut(s) | 337, 338, 543 |
| PsuI | RGATCY | 3 cut(s) | 190, 292, 781 |
| RsaI | GTAC | 8 cut(s) | 483, 529, 556, 608, 644, 721, 1416, 1462 |
| RsaNI | GTAC | 8 cut(s) | 482, 528, 555, 607, 643, 720, 1415, 1461 |
| RseI | CAYNNNNRTG | 5 cut(s) | 868, 946, 1089, 1139, 1476 |
| SapI | GCTCTTC | 1 cut(s) | 1518 |
| SaqAI | TTAA | 6 cut(s) | 215, 584, 1053, 1065, 1284, 1690 |
| SatI | GCNGC | 2 cut(s) | 138, 875 |
| Sau96I | GGNCC | 3 cut(s) | 337, 338, 543 |
| ScaI | AGTACT | 1 cut(s) | 721 |
| SduI | GDGCHC | 4 cut(s) | 110, 341, 440, 776 |
| SfaNI | GCATC | 2 cut(s) | 420, 814 |
| SfcI | CTRYAG | 3 cut(s) | 25, 777, 1342 |
| SinI | GGWCC | 1 cut(s) | 543 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 868, 946, 1089, 1139, 1476 |
| SmlI | CTYRAG | 2 cut(s) | 1265, 1328 |
| SmoI | CTYRAG | 2 cut(s) | 1265, 1328 |
| SseBI | AGGCCT | 1 cut(s) | 324 |
| SsiI | CCGC | 3 cut(s) | 331, 433, 552 |
| SspMI | CTAG | 2 cut(s) | 305, 1208 |
| StuI | AGGCCT | 1 cut(s) | 324 |
| StyI | CCWWGG | 2 cut(s) | 925, 1276 |
| TaaI | ACNGT | 6 cut(s) | 124, 357, 522, 996, 1570, 1615 |
| TaiI | ACGT | 3 cut(s) | 533, 1020, 1167 |
| TaqI | TCGA | 6 cut(s) | 126, 280, 804, 851, 977, 1366 |
| TatI | WGTACW | 3 cut(s) | 481, 719, 1414 |
| TfiI | GAWTC | 2 cut(s) | 39, 1111 |
| Tru1I | TTAA | 6 cut(s) | 215, 584, 1053, 1065, 1284, 1690 |
| Tru9I | TTAA | 6 cut(s) | 215, 584, 1053, 1065, 1284, 1690 |
| TscAI | CASTG | 3 cut(s) | 102, 127, 943 |
| TseFI | GTSAC | 2 cut(s) | 1013, 1399 |
| TseI | GCWGC | 2 cut(s) | 137, 874 |
| Tsp45I | GTSAC | 2 cut(s) | 1013, 1399 |
| TspDTI | ATGAA | 9 cut(s) | 17, 67, 103, 287, 473, 714, 1101, 1243, 1692 |
| TspGWI | ACGGA | 1 cut(s) | 1310 |
| TspRI | CASTG | 3 cut(s) | 102, 127, 943 |
| VpaK11BI | GGWCC | 1 cut(s) | 543 |
| VspI | ATTAAT | 1 cut(s) | 1065 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 60 |
| XapI | RAATTY | 5 cut(s) | 5, 713, 856, 1223, 1314 |
| XceI | RCATGY | 1 cut(s) | 689 |
| XmiI | GTMKAC | 1 cut(s) | 1041 |
| XmnI | GAANNNNTTC | 1 cut(s) | 324 |
| XspI | CTAG | 2 cut(s) | 305, 1208 |
| ZrmI | AGTACT | 1 cut(s) | 721 |