Cyclic nucleotide-gated ion channel 1-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Ion_trans | PF00520 | 23 - 349 | 4.8e-10 | Ion transport protein |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 948 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 960 |
| AciI | CCGC | 3 cut(s) | 581, 878, 977 |
| AclWI | GGATC | 2 cut(s) | 41, 113 |
| AcsI | RAATTY | 4 cut(s) | 58, 871, 884, 1027 |
| AfaI | GTAC | 2 cut(s) | 639, 952 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 172, 294, 459, 960, 976 |
| AflIII | ACRYGT | 2 cut(s) | 351, 1089 |
| AgsI | TTSAA | 4 cut(s) | 34, 187, 515, 607 |
| AjiI | CACGTC | 1 cut(s) | 354 |
| AluBI | AGCT | 7 cut(s) | 260, 368, 410, 444, 465, 647, 683 |
| AluI | AGCT | 7 cut(s) | 260, 368, 410, 444, 465, 647, 683 |
| Alw21I | GWGCWC | 1 cut(s) | 467 |
| Alw26I | GTCTC | 1 cut(s) | 671 |
| AlwI | GGATC | 2 cut(s) | 41, 113 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 940 |
| Ama87I | CYCGRG | 1 cut(s) | 326 |
| AoxI | GGCC | 2 cut(s) | 907, 1070 |
| ApeKI | GCWGC | 1 cut(s) | 943 |
| ApoI | RAATTY | 4 cut(s) | 58, 871, 884, 1027 |
| AspS9I | GGNCC | 2 cut(s) | 907, 1070 |
| AvaI | CYCGRG | 1 cut(s) | 326 |
| AxyI | CCTNAGG | 1 cut(s) | 1074 |
| BanII | GRGCYC | 1 cut(s) | 467 |
| BbsI | GAAGAC | 1 cut(s) | 159 |
| Bbv12I | GWGCWC | 1 cut(s) | 467 |
| BbvI | GCAGC | 1 cut(s) | 955 |
| BccI | CCATC | 1 cut(s) | 229 |
| BceAI | ACGGC | 2 cut(s) | 285, 751 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 192, 226 |
| BcoDI | GTCTC | 1 cut(s) | 671 |
| BfaI | CTAG | 3 cut(s) | 494, 626, 860 |
| BfmI | CTRYAG | 2 cut(s) | 141, 941 |
| BfuAI | ACCTGC | 1 cut(s) | 948 |
| BglII | AGATCT | 1 cut(s) | 470 |
| BisI | GCNGC | 1 cut(s) | 944 |
| BlsI | GCNGC | 1 cut(s) | 945 |
| BmeT110I | CYCGRG | 1 cut(s) | 326 |
| BmgBI | CACGTC | 1 cut(s) | 354 |
| BmgT120I | GGNCC | 2 cut(s) | 907, 1070 |
| BmiI | GGNNCC | 1 cut(s) | 908 |
| BmrI | ACTGGG | 1 cut(s) | 942 |
| BmsI | GCATC | 2 cut(s) | 212, 829 |
| BmuI | ACTGGG | 1 cut(s) | 942 |
| BpiI | GAAGAC | 1 cut(s) | 159 |
| BpuEI | CTTGAG | 2 cut(s) | 289, 451 |
| BsaAI | YACGTR | 1 cut(s) | 637 |
| BsaJI | CCNNGG | 1 cut(s) | 524 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 172, 294, 459, 960, 976 |
| Bse1I | ACTGG | 2 cut(s) | 68, 948 |
| Bse21I | CCTNAGG | 1 cut(s) | 1074 |
| BseDI | CCNNGG | 1 cut(s) | 524 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 172, 294, 459, 960, 976 |
| BseMII | CTCAG | 2 cut(s) | 181, 934 |
| BseNI | ACTGG | 2 cut(s) | 68, 948 |
| BseRI | GAGGAG | 1 cut(s) | 475 |
| BseXI | GCAGC | 1 cut(s) | 955 |
| BshFI | GGCC | 2 cut(s) | 909, 1072 |
| BsiHKAI | GWGCWC | 1 cut(s) | 467 |
| BsiHKCI | CYCGRG | 1 cut(s) | 326 |
| BslFI | GGGAC | 1 cut(s) | 1093 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 172, 294, 459, 960, 976 |
| BsmAI | GTCTC | 1 cut(s) | 671 |
| BsmFI | GGGAC | 1 cut(s) | 1093 |
| BsnI | GGCC | 2 cut(s) | 909, 1072 |
| BsoBI | CYCGRG | 1 cut(s) | 326 |
| Bsp1286I | GDGCHC | 1 cut(s) | 467 |
| Bsp143I | GATC | 7 cut(s) | 46, 118, 209, 220, 383, 470, 745 |
| BspACI | CCGC | 3 cut(s) | 581, 878, 977 |
| BspANI | GGCC | 2 cut(s) | 909, 1072 |
| BspCNI | CTCAG | 2 cut(s) | 180, 933 |
| BspLI | GGNNCC | 1 cut(s) | 908 |
| BspMAI | CTGCAG | 1 cut(s) | 945 |
| BspMI | ACCTGC | 1 cut(s) | 948 |
| BspPI | GGATC | 2 cut(s) | 41, 113 |
| BsrI | ACTGG | 2 cut(s) | 68, 948 |
| BssECI | CCNNGG | 1 cut(s) | 524 |
| BssMI | GATC | 7 cut(s) | 46, 118, 209, 220, 383, 470, 745 |
| Bst4CI | ACNGT | 1 cut(s) | 704 |
| BstBAI | YACGTR | 1 cut(s) | 637 |
| BstC8I | GCNNGC | 6 cut(s) | 101, 105, 583, 857, 911, 1001 |
| BstDEI | CTNAG | 3 cut(s) | 167, 920, 1074 |
| BstDSI | CCRYGG | 1 cut(s) | 524 |
| BstKTI | GATC | 7 cut(s) | 49, 121, 212, 223, 386, 473, 748 |
| BstMAI | GTCTC | 1 cut(s) | 671 |
| BstMBI | GATC | 7 cut(s) | 46, 118, 209, 220, 383, 470, 745 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 735 |
| BstNSI | RCATGY | 3 cut(s) | 99, 859, 1093 |
| BstSFI | CTRYAG | 2 cut(s) | 141, 941 |
| BstV1I | GCAGC | 1 cut(s) | 955 |
| BstV2I | GAAGAC | 1 cut(s) | 159 |
| BstX2I | RGATCY | 1 cut(s) | 470 |
| BstYI | RGATCY | 1 cut(s) | 470 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1074 |
| BsuRI | GGCC | 2 cut(s) | 909, 1072 |
| BtgI | CCRYGG | 1 cut(s) | 524 |
| BtrI | CACGTC | 1 cut(s) | 354 |
| BveI | ACCTGC | 1 cut(s) | 948 |
| Cac8I | GCNNGC | 6 cut(s) | 101, 105, 583, 857, 911, 1001 |
| CaiI | CAGNNNCTG | 1 cut(s) | 940 |
| Cfr13I | GGNCC | 2 cut(s) | 907, 1070 |
| Csp6I | GTAC | 2 cut(s) | 638, 951 |
| CviAII | CATG | 6 cut(s) | 96, 157, 232, 725, 856, 1090 |
| CviQI | GTAC | 2 cut(s) | 638, 951 |
| DdeI | CTNAG | 3 cut(s) | 167, 920, 1074 |
| DpnI | GATC | 7 cut(s) | 48, 120, 211, 222, 385, 472, 747 |
| DpnII | GATC | 7 cut(s) | 46, 118, 209, 220, 383, 470, 745 |
| DraI | TTTAAA | 1 cut(s) | 249 |
| Ecl136II | GAGCTC | 1 cut(s) | 465 |
| Eco24I | GRGCYC | 1 cut(s) | 467 |
| Eco53kI | GAGCTC | 1 cut(s) | 465 |
| Eco81I | CCTNAGG | 1 cut(s) | 1074 |
| Eco88I | CYCGRG | 1 cut(s) | 326 |
| EcoICRI | GAGCTC | 1 cut(s) | 465 |
| EcoO109I | RGGNCCY | 2 cut(s) | 907, 1070 |
| EcoT38I | GRGCYC | 1 cut(s) | 467 |
| FaeI | CATG | 6 cut(s) | 99, 160, 235, 728, 859, 1093 |
| FaqI | GGGAC | 1 cut(s) | 1093 |
| FatI | CATG | 6 cut(s) | 95, 156, 231, 724, 855, 1089 |
| FauI | CCCGC | 1 cut(s) | 574 |
| Fnu4HI | GCNGC | 1 cut(s) | 944 |
| FriOI | GRGCYC | 1 cut(s) | 467 |
| Fsp4HI | GCNGC | 1 cut(s) | 944 |
| FspBI | CTAG | 3 cut(s) | 494, 626, 860 |
| GluI | GCNGC | 1 cut(s) | 944 |
| HaeIII | GGCC | 2 cut(s) | 909, 1072 |
| Hin1II | CATG | 6 cut(s) | 99, 160, 235, 728, 859, 1093 |
| HincII | GTYRAC | 1 cut(s) | 867 |
| HindII | GTYRAC | 1 cut(s) | 867 |
| HinfI | GANTC | 3 cut(s) | 299, 497, 568 |
| Hpy166II | GTNNAC | 3 cut(s) | 216, 400, 867 |
| Hpy188I | TCNGA | 4 cut(s) | 383, 478, 644, 936 |
| Hpy188III | TCNNGA | 6 cut(s) | 24, 34, 50, 207, 468, 759 |
| Hpy8I | GTNNAC | 3 cut(s) | 216, 400, 867 |
| HpyAV | CCTTC | 3 cut(s) | 47, 74, 181 |
| HpyCH4III | ACNGT | 1 cut(s) | 704 |
| HpyCH4IV | ACGT | 2 cut(s) | 353, 636 |
| HpyCH4V | TGCA | 4 cut(s) | 203, 943, 1033, 1045 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 735 |
| HpyF3I | CTNAG | 3 cut(s) | 167, 920, 1074 |
| HpySE526I | ACGT | 2 cut(s) | 353, 636 |
| Hsp92II | CATG | 6 cut(s) | 99, 160, 235, 728, 859, 1093 |
| Kzo9I | GATC | 7 cut(s) | 46, 118, 209, 220, 383, 470, 745 |
| LmnI | GCTCC | 2 cut(s) | 462, 644 |
| Lsp1109I | GCAGC | 1 cut(s) | 955 |
| LweI | GCATC | 2 cut(s) | 212, 829 |
| MaeI | CTAG | 3 cut(s) | 494, 626, 860 |
| MaeII | ACGT | 2 cut(s) | 353, 636 |
| MaeIII | GTNAC | 4 cut(s) | 91, 632, 731, 766 |
| MalI | GATC | 7 cut(s) | 48, 120, 211, 222, 385, 472, 747 |
| MboI | GATC | 7 cut(s) | 46, 118, 209, 220, 383, 470, 745 |
| MboII | GAAGA | 5 cut(s) | 121, 164, 407, 465, 524 |
| MfeI | CAATTG | 1 cut(s) | 192 |
| MflI | RGATCY | 1 cut(s) | 470 |
| MhlI | GDGCHC | 1 cut(s) | 467 |
| MluCI | AATT | 9 cut(s) | 39, 58, 192, 435, 607, 871, 884, 891, 1027 |
| MlyI | GAGTC | 1 cut(s) | 491 |
| MnlI | CCTC | 4 cut(s) | 176, 313, 453, 980 |
| MseI | TTAA | 4 cut(s) | 248, 594, 671, 890 |
| MslI | CAYNNNNRTG | 2 cut(s) | 356, 395 |
| MunI | CAATTG | 1 cut(s) | 192 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 735 |
| NdeII | GATC | 7 cut(s) | 46, 118, 209, 220, 383, 470, 745 |
| NlaIII | CATG | 6 cut(s) | 99, 160, 235, 728, 859, 1093 |
| NlaIV | GGNNCC | 1 cut(s) | 908 |
| NmuCI | GTSAC | 1 cut(s) | 632 |
| NspI | RCATGY | 3 cut(s) | 99, 859, 1093 |
| PaeI | GCATGC | 1 cut(s) | 859 |
| PaeR7I | CTCGAG | 1 cut(s) | 326 |
| PciI | ACATGT | 1 cut(s) | 1089 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 379 |
| PfeI | GAWTC | 2 cut(s) | 299, 568 |
| PflFI | GACNNNGTC | 1 cut(s) | 786 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 960 |
| PkrI | GCNGC | 1 cut(s) | 945 |
| PleI | GAGTC | 1 cut(s) | 491 |
| PpsI | GAGTC | 1 cut(s) | 491 |
| Ppu21I | YACGTR | 1 cut(s) | 637 |
| PscI | ACATGT | 1 cut(s) | 1089 |
| Psp124BI | GAGCTC | 1 cut(s) | 467 |
| PspN4I | GGNNCC | 1 cut(s) | 908 |
| PspPI | GGNCC | 2 cut(s) | 907, 1070 |
| PspXI | VCTCGAGB | 1 cut(s) | 326 |
| PstI | CTGCAG | 1 cut(s) | 945 |
| PstNI | CAGNNNCTG | 1 cut(s) | 940 |
| PsuI | RGATCY | 1 cut(s) | 470 |
| PsyI | GACNNNGTC | 1 cut(s) | 786 |
| RsaI | GTAC | 2 cut(s) | 639, 952 |
| RsaNI | GTAC | 2 cut(s) | 638, 951 |
| RseI | CAYNNNNRTG | 2 cut(s) | 356, 395 |
| SacI | GAGCTC | 1 cut(s) | 467 |
| SaqAI | TTAA | 4 cut(s) | 248, 594, 671, 890 |
| SatI | GCNGC | 1 cut(s) | 944 |
| Sau3AI | GATC | 7 cut(s) | 46, 118, 209, 220, 383, 470, 745 |
| Sau96I | GGNCC | 2 cut(s) | 907, 1070 |
| SchI | GAGTC | 1 cut(s) | 491 |
| SduI | GDGCHC | 1 cut(s) | 467 |
| SfaNI | GCATC | 2 cut(s) | 212, 829 |
| SfcI | CTRYAG | 2 cut(s) | 141, 941 |
| Sfr274I | CTCGAG | 1 cut(s) | 326 |
| SlaI | CTCGAG | 1 cut(s) | 326 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 356, 395 |
| SmlI | CTYRAG | 3 cut(s) | 304, 326, 466 |
| SmoI | CTYRAG | 3 cut(s) | 304, 326, 466 |
| SphI | GCATGC | 1 cut(s) | 859 |
| Sse9I | AATT | 9 cut(s) | 39, 58, 192, 435, 607, 871, 884, 891, 1027 |
| SsiI | CCGC | 3 cut(s) | 581, 878, 977 |
| SspMI | CTAG | 3 cut(s) | 494, 626, 860 |
| SstI | GAGCTC | 1 cut(s) | 467 |
| TaaI | ACNGT | 1 cut(s) | 704 |
| TaiI | ACGT | 2 cut(s) | 356, 639 |
| TaqI | TCGA | 3 cut(s) | 117, 327, 819 |
| TasI | AATT | 9 cut(s) | 39, 58, 192, 435, 607, 871, 884, 891, 1027 |
| TfiI | GAWTC | 2 cut(s) | 299, 568 |
| Tru1I | TTAA | 4 cut(s) | 248, 594, 671, 890 |
| Tru9I | TTAA | 4 cut(s) | 248, 594, 671, 890 |
| TseFI | GTSAC | 1 cut(s) | 632 |
| TseI | GCWGC | 1 cut(s) | 943 |
| Tsp45I | GTSAC | 1 cut(s) | 632 |
| TspDTI | ATGAA | 4 cut(s) | 165, 173, 570, 735 |
| TspGWI | ACGGA | 1 cut(s) | 388 |
| Tth111I | GACNNNGTC | 1 cut(s) | 786 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 960 |
| XapI | RAATTY | 4 cut(s) | 58, 871, 884, 1027 |
| XceI | RCATGY | 3 cut(s) | 99, 859, 1093 |
| XhoI | CTCGAG | 1 cut(s) | 326 |
| XspI | CTAG | 3 cut(s) | 494, 626, 860 |