MD01G1117000.v1.1

Cyclic nucleotide-gated ion channel 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr01
OG0000017
Physical Location & Seq
Forward (+)
23077665 .. 23088875
11211 bp
Loading structure...
UTR
Exon/CDS
Intron
MD01G1117000.v1.1.491

Sequence Viewer

Length: 3852 bp
ATGCCGCCTGAAGATAAATTAAGTTGCATCTGGAGAAAAAATCATACTGAAGTGTCTTTCTATCGAAAGTACTGGTGGAATAATATATTCATTGCATCGTGCTTGTGTTCCCTTTTTGTGGATCCATTATTCCTCTACGTTCCTATTCTTAAGGATGATTTCAAGTGCCTTATGTTAGACCCAAAGTTGAAGATAATCGTTCTTCTTTTAAGATCACTCACAGATTTTTTCTATTTAATGGACATTATTATTCGAATTTATAGATCTGATTCGGGTTCAATCGTGAACCGCGGACAACACCGGATGGATTTTAGTTTTGTACTGAAATCTTGTGTCCCAAGAATAGTCAAGACAATATGGGCGTCAAATGATATCATAATTGACATTGTAGCTCTTCTTCCTTTTCCACAGGTGGCAGTTTTTATTTTCTTCTCAAAAATGTGTGACTTGAGATCTTTGACTCCAATAAGGATGGTTCTTACGAACGTTTTTGCTGTGTTGCAATATGTGCCACGAGTTCTTCGCATCTACCTCTCATCTAATGAACTTAAAAAGAATCTTGAAAAAGATGTTACAAAGACTCCCATATGGATTAAAGGTGTACTCAATTTCTGTATGTACACTATTGCTAGTCATGTAATCGGAGCTTTGTGGTATTTTTTTGCTATTCAACGAATGATGATTTGTTGGCATTTTGCATGTCGAAAAGATGATGGATGTGATAACAGAATTTTTGGTTGTCATGATCACCATGCATTTAGAAATACCACAATTCTAAATGATTTATGTCCTGTCAATGTCAGTGTCAATTCATCAGACACAATGCTCTTCGATTTTGGTATATTTGCTACTGTGCTTCAATATGGTATTGTAGGATCAACCAATTATTTCAAAAAGCTCTTGAACTGTTTCTGGTGGGGTTTACGAAATTTAAGTTCCCTTGGTTCAAATCTTCAGCCCAGTGCAGATGGATGGGAGAACCTGTATACGATTTTTATTTCTATAACTGGCTTGCTCCTGTTTTTATATCTGATTGGAAATTTGCAGACATATATGCAACTTGAGTCTACAAGAACAGAGAATCACATGCAATTGAGACAGAAGATGAAAGGAAAAGATGACGAAATAGAATTGTGGTTATTCAAAAAGGGCATTCCCACCAGGTTGATTAAGGATTTCAAGTTGCAGATTTTGGAAAAGGTAAAACAAGCAGCTCAAGAGGATACGGATACTAATTTGGATAATATTCTCCCTCTTCTTCCTTCGGAAGTTCAAAGCCACATAAAAGAGCCTTTTGACAAGTTGAAGCAAGTGCCAATGCTTCGAGAGATAGATGAAGATGTGTTGAAAATAATCTGTCAGGAACTCGAGCCCGTGAGGTATACTGAGAACGACGATATTATTCAAAAGGATAAACCACTTGCCAAGATTCTCTTCATTGTAGACGGAGATGTATCCATTGAAGAGGGATCTTCTGATGATTCAAAACGAGGTGCAGGACAATTATGTGGAGAAGAACTTCTACGTTGGCCATTCTACTCTTACTTCCCTGACAAAACACCGTTGGCAACTAAATCTGTCAAGGCAATTGGTGTTGTTGAAGCCCTTGCTCTCAACGCACAGGACTTGCAAAGTAAATATGATCAATCAGACATTGCAATAAAAGAGACGTCTAGACAAAGAGGAATGATGAAAAAGGAGATGGAAACAAATATAGATGGGTTGATACATAGAAAAGAAATTCCTGAATGGTTTAATCAAAGTGTAAAGTCACGGATCATGGAAAAAATAGAAGAACAAGTTCAAAATAATGCTCTTTATTGGGATAAGCTTGATTGGGATTGGGATCATCTCGTTTCTCATCTTCCCCTGGATTTTCAAAACGAGATCAAAAGGTGTATGGCATTGACTAAGTTGAAGAAGGTGCCAATGCTTCGACGGATAGATGAAGATGTGTTGAAAATAATCTGTCAGAAACTCGAGCCTGTGAGGTATACTGATAACAACTTGATTATTCAAAAGGGTGAACAACTGGACAAGATGGTCTACATTGAAGACGGATTTGTATCCATTGAAGAGAGATCTTCTAATAATTTGAGACTAGGTGCAGGGGAATTCTGTGGACAAGAACTTCTACGTTGGCCTTTCTCCACTGACTTCCCTAACAGAAAACCGTTGGCAACTGAATCTGTCAAGGCAATTGGTGTTGTTGAAGCCCTTGCTCTCAACGCACAGGACTTGCTAAGTATGTATCTTGAGTCAAACATTAAAGGAAAAGAGGAGCCTAGACACAGAAGAATGATGAAAGAGGAGATTGAGCGAAATATAGATGGATTGATACGTAGAAATGGGATTCCTGAAAGGTTAAATCATAATGTAAAGTCACGGATCATGGAAAATGTAGAAGAAAATTTTCAACAATATGATCATTATTGGGATTTGCTCGATTGGGATCACCTCGTTCCTGGTCTTCCCTTGGATTTTCAAAAAGAGATCATAAGTTACATGCCATTGACAAAGTTGAAGCAGATGCCAGCATTCCAGTACATGAATGATGAAGTGATGAAAGAAATTTGTAGCCATCTTCGGCCCATGAAGTATAATCGTACCGATAACATTATTGATAAGGGTAACCCAATTCAAATGTTGTTGATTGTGGAAGGAAGCATAGGCCAAGAAGGTTGGGTAAAAGATGCAGGAGAAATCTATGGAGAAGAACTTCTGGTTTGGCCATTCTCGACCTCTTTCCCTAACAAAGTACCTACAGCAGCTGAGTCTCCTTTTGTAAGTACGGATGTTGTTGAAGCCCTTGTTCTGACGGCCAGTGACATGGAGAGTGTAGCCACTAAATTCCGGAAACATTTCATAAAAAATTACGGCAAATTCGTACGCATGGAGAGTGCATTCCCTTACGACTATTCTGAAGGGGATATTAAGAAGGCCACAACAAACTACACGTGTTTGAACAATCCAAATGAAGGAGGCTATGGAACAGTCTACCACCCAGAATTAAATGGAAGATCTGTTGCCATAAAAACGTGCAACAGTACTACTGGTGACCCGTTCATCCAGAGTCAACGTCTGGTTCATGAGGCATTTGTTCTTTCTCAAATCGATCACGAAAATGTGGAGAAGCTGTTAGGTTGTTGTTTAGAGACAACATGGCCTATAATGGTTTATGACCGCACCAATGCTTTGACTTTTGTTGAGCACTTTCACAGAAACAAATCAAAACTCTCGTTGGAATCACGAATGACGATAGCAGCGGAAACTGCAGGAGCTCTAGCACACATGCACTCCAGCTCAGTCATACACCGAGATGTGAAGACAGCGAATATATTAATAGATCATACAACTCACACTGTACAAGTTACCGGTTTTGGAGCTTCACGATTGCTTGATGAAGATGAAGGTGAAATGGAAGATCGAGTGTCAACTTTGCCAAGGACATTGGGATACTTAGACCCCGAGTATCTTGAATCACACATGCTAACAAAGAAGAGCGACGTCTATAGCTTCGGAGTTGTTCTAGTGGAGCTACTAACACGTCAAGAGTCAGTTTCTTCTAACGGGTCTGAAACATCCCTAGCAAACGACTTTGTTCGTTCAGTGCATGAGGATCGCTTGGGCCAAATTCTCGATGGTGAAATAAACACAGACAAGTTTAGTTATGAGATGGCCAAAAAAGTGAGCGAGCTTGCCGTGACATGTTTGAGGTCAAGGGGAGAGGAAAGGCCTTCCATGGAAAAAGTAGCTGAGGAGCTTGAGGGAGTAGTGCAAGCTATTATGAACAGGGTAGAGCATTCTACGGTGGACGATAATATATCTTCCGCTTCTAGAACTTCCGAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
Ion_trans Pkinase Pkinase_Tyr cNMP_binding

Protein Analysis

1284

Amino Acids

147.71

Weight (kDa)

5.65

Isoelectric Point (pI)

44.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ion_trans PF00520 24 - 358 4e-08 Ion transport protein
Pkinase PF00069 993 - 1253 8e-38 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 993 - 1255 5.5e-37 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000017)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07351 FvH4_1g11800 FvH4_1g11800 FvH4_1g11800 FvH4_1g11800 FvH4_1g11800 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_4g14360 FvH4_6g13561 FvH4_6g13562 FvH4_6g13580 FvH4_6g13590 FvH4_6g13590 FvH4_6g13590 FvH4_6g13731 FvH4_6g13770 FvH4_6g13800 FvH4_6g13800 FvH4_6g13860 FvH4_6g13870 FvH4_6g13870 FvH4_6g13870 FvH4_6g13870 FvH4_6g13870 FvH4_6g13890 FvH4_6g33801 FvH4_7g13020 FvH4_7g13270 FvH4_7g13270 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g14580 FvH4_7g14580 FvH4_7g14580 FvH4_7g14600 FvH4_7g14600 FvH4_7g20030 FvH4_7g20510 FvH4_7g20510 FvH4_7g20510 FvH4_7g20670 FvH4_7g20670 FvH4_7g20670 FvH4_7g20670 FvH4_7g20690 FvH4_7g20690 FvH4_7g31930 FvH4_7g31930 FvH4_7g31940 FvH4_7g31940
malus_domestica MD01G1115700.v1.1 MD01G1115800.v1.1 MD01G1116600.v1.1 MD01G1116700.v1.1 MD01G1117000.v1.1 MD01G1225000.v1.1 MD02G1077900.v1.1 MD02G1078000.v1.1 MD02G1078200.v1.1 MD02G1078400.v1.1 MD02G1084300.v1.1 MD04G1004700.v1.1 MD04G1123100.v1.1 MD04G1123200.v1.1 MD04G1128000.v1.1 MD04G1128400.v1.1 MD05G1299700.v1.1 MD05G1300000.v1.1 MD07G1184000.v1.1 MD07G1292300.v1.1 MD08G1214800.v1.1
prunus_persica Prupe.1G205100_v2.0.a1 Prupe.1G205100_v2.0.a1 Prupe.1G205200_v2.0.a1 Prupe.2G222300_v2.0.a1 Prupe.2G223300_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223600_v2.0.a1 Prupe.2G223600_v2.0.a1 Prupe.2G223600_v2.0.a1 Prupe.2G223700_v2.0.a1 Prupe.2G223700_v2.0.a1 Prupe.2G223700_v2.0.a1 Prupe.2G223700_v2.0.a1 Prupe.2G223800_v2.0.a1 Prupe.2G223900_v2.0.a1 Prupe.2G224000_v2.0.a1 Prupe.5G162000_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G291000_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G210400_v2.0.a1 Prupe.7G210600_v2.0.a1 Prupe.7G210700_v2.0.a1 Prupe.7G210800_v2.0.a1 Prupe.7G210900_v2.0.a1 Prupe.8G097600_v2.0.a1 Prupe.8G097800_v2.0.a1 Prupe.8G097800_v2.0.a1
pyrus_communis pycom01g14430 pycom01g14440 pycom01g23130 pycom01g23160 pycom01g23330 pycom02g06210 pycom02g06220 pycom02g06250 pycom02g06270 pycom02g06710 pycom03g05360 pycom03g05380 pycom04g11470 pycom04g11480 pycom04g11520 pycom04g11560 pycom04g11600 pycom04g11610 pycom04g11650 pycom04g11660 pycom04g11670 pycom05g27790 pycom07g17630 pycom08g20960 pycom126g00020 pycom126g00030
rosa_chinensis RchiOBHm_Chr1g0318251 RchiOBHm_Chr1g0318731 RchiOBHm_Chr1g0339101 RchiOBHm_Chr1g0339111 RchiOBHm_Chr1g0347151 RchiOBHm_Chr1g0347161 RchiOBHm_Chr1g0347221 RchiOBHm_Chr1g0352401 RchiOBHm_Chr1g0352441 RchiOBHm_Chr1g0352461 RchiOBHm_Chr1g0356131 RchiOBHm_Chr1g0363991 RchiOBHm_Chr1g0364791 RchiOBHm_Chr1g0364801 RchiOBHm_Chr1g0364811 RchiOBHm_Chr1g0364851 RchiOBHm_Chr1g0364951 RchiOBHm_Chr1g0370821 RchiOBHm_Chr1g0381221 RchiOBHm_Chr1g0381231 RchiOBHm_Chr1g0381261 RchiOBHm_Chr1g0381271 RchiOBHm_Chr1g0381341 RchiOBHm_Chr1g0381351 RchiOBHm_Chr1g0381391 RchiOBHm_Chr1g0381801 RchiOBHm_Chr1g0381821 RchiOBHm_Chr2g0093241 RchiOBHm_Chr2g0116391 RchiOBHm_Chr3g0466441 RchiOBHm_Chr3g0466631 RchiOBHm_Chr3g0466651 RchiOBHm_Chr3g0496921 RchiOBHm_Chr4g0400441 RchiOBHm_Chr4g0400501 RchiOBHm_Chr4g0400511 RchiOBHm_Chr4g0400691 RchiOBHm_Chr4g0400701 RchiOBHm_Chr4g0404331 RchiOBHm_Chr5g0052101 RchiOBHm_Chr5g0052111 RchiOBHm_Chr5g0052171 RchiOBHm_Chr5g0052181 RchiOBHm_Chr6g0264161 RchiOBHm_Chr6g0265551 RchiOBHm_Chr7g0213571 RchiOBHm_Chr7g0213581
rosa_laevigata RLG00000002796 RLG00000003261 RLG00000007935 RLG00000007936 RLG00000009187 RLG00000014179 RLG00000016381 RLG00000018265 RLG00000024558 RLG00000024574 RLG00000026232 RLG00000026234 RLG00000026236 RLG00000026237 RLG00000027459 RLG00000027461 RLG00000027463 RLG00000027530 RLG00000028103 RLG00000028304 RLG00000028333 RLG00000029214 RLG00000029848 RLG00000029951 RLG00000030115 RLG00000030552 RLG00000033668 RLG00000034840 RLG00000034841 RLG00000034842 RLG00000035830
rosa_multiflora Rmu_sc0000654.1_g000004 Rmu_sc0000675.1_g000025 Rmu_sc0001075.1_g000002 Rmu_sc0001726.1_g000004 Rmu_sc0001772.1_g000061 Rmu_sc0001772.1_g000065 Rmu_sc0002067.1_g000002 Rmu_sc0002183.1_g000001 Rmu_sc0002183.1_g000006 Rmu_sc0002244.1_g000003 Rmu_sc0002313.1_g000004 Rmu_sc0002319.1_g000004 Rmu_sc0002539.1_g000085 Rmu_sc0002636.1_g000004 Rmu_sc0003229.1_g000007 Rmu_sc0003313.1_g000020 Rmu_sc0003546.1_g000007 Rmu_sc0003724.1_g000015 Rmu_sc0003936.1_g000029 Rmu_sc0004191.1_g000067 Rmu_sc0004525.1_g000012 Rmu_sc0005122.1_g000009 Rmu_sc0005255.1_g000040 Rmu_sc0005338.1_g000016 Rmu_sc0005584.1_g000008 Rmu_sc0006460.1_g000013 Rmu_sc0006872.1_g000011 Rmu_sc0006872.1_g000015 Rmu_sc0006872.1_g000016 Rmu_sc0006952.1_g000013 Rmu_sc0007342.1_g000005 Rmu_sc0007342.1_g000006 Rmu_sc0008418.1_g000003 Rmu_sc0008418.1_g000006 Rmu_sc0008636.1_g000007 Rmu_sc0008636.1_g000008 Rmu_sc0009205.1_g000014 Rmu_sc0009365.1_g000014 Rmu_sc0009917.1_g000002 Rmu_sc0019289.1_g000003 Rmu_ssc0000098.1_g000011 Rmu_ssc0000098.1_g000012 Rmu_ssc0000167.1_g000018 Rmu_ssc0000167.1_g000024 Rmu_ssc0000326.1_g000015
rosa_roxburghii Rroxscaffold_166G00440780 Rroxscaffold_176G00431500 Rroxscaffold_1G00015080 Rroxscaffold_1G00027880 Rroxscaffold_1G00027890 Rroxscaffold_1G00027920 Rroxscaffold_2G00127250 Rroxscaffold_2G00148380 Rroxscaffold_3G00219450 Rroxscaffold_3G00232170 Rroxscaffold_3G00232210 Rroxscaffold_3G00242230 Rroxscaffold_3G00242240 Rroxscaffold_3G00244790 Rroxscaffold_3G00245790 Rroxscaffold_4G00278400 Rroxscaffold_4G00278430 Rroxscaffold_4G00278670 Rroxscaffold_4G00278680 Rroxscaffold_4G00278690 Rroxscaffold_4G00278700 Rroxscaffold_4G00278720 Rroxscaffold_4G00291690 Rroxscaffold_4G00292070 Rroxscaffold_4G00292090 Rroxscaffold_4G00292770 Rroxscaffold_4G00302240 Rroxscaffold_4G00302860 Rroxscaffold_4G00311320 Rroxscaffold_4G00311330 Rroxscaffold_4G00320570 Rroxscaffold_4G00322050 Rroxscaffold_4G00329480 Rroxscaffold_4G00329730 Rroxscaffold_5G00345500 Rroxscaffold_5G00345510 Rroxscaffold_5G00360830 Rroxscaffold_5G00360840 Rroxscaffold_6G00393450 Rroxscaffold_6G00404030 Rroxscaffold_6G00414220 Rroxscaffold_6G00414230 Rroxscaffold_6G00414280 Rroxscaffold_6G00414290 Rroxscaffold_6G00414350 Rroxscaffold_6G00414470 Rroxscaffold_7G00202570 Rroxscaffold_7G00203460 Rroxscaffold_7G00203470
rosa_rugosa Rorug01G0020500 Rorug01G0020600 Rorug01G0020700 Rorug01G0143700.1 Rorug01G0225700 Rorug01G0228500 Rorug01G0228600 Rorug01G0228600 Rorug01G0228700 Rorug01G0228800 Rorug01G0228800 Rorug01G0229000 Rorug01G0229300 Rorug01G0229400 Rorug01G0229600 Rorug01G0229700 Rorug01G0232200 Rorug01G0232600 Rorug01G0232600 Rorug01G0311900 Rorug01G0311900 Rorug01G0318400 Rorug01G0318500 Rorug01G0318500 Rorug01G0318500 Rorug01G0427900 Rorug01G0427900 Rorug01G0428000 Rorug01G0428200 Rorug01G0428300 Rorug01G0428400 Rorug01G0431500 Rorug01G0431600 Rorug01G0431600 Rorug02G0033800 Rorug02G0206300 Rorug03G0081900 Rorug03G0083200 Rorug03G0083200 Rorug03G0083300 Rorug04G0025100 Rorug04G0025100 Rorug04G0025200 Rorug04G0025300 Rorug04G0058600 Rorug04G0058700 Rorug04G0058800 Rorug04G0098400 Rorug04G0098500 Rorug05G0274500 Rorug05G0274600 Rorug05G0274800 Rorug06G0008500 Rorug06G0009100 Rorug06G0018000
rosa_samantha Rh1AG031700 Rh1AG036100 Rh1AG089800 Rh1AG239800 Rh1AG239900 Rh1AG242000 Rh1AG242300 Rh1AG245600 Rh1AG262600 Rh1AG319700 Rh1AG319800 Rh1AG319900 Rh1AG327200 Rh1AG451100 Rh1AG451200 Rh1AG451300 Rh1AG451600 Rh1AG451700 Rh1BG027200 Rh1BG071600 Rh1BG090700 Rh1BG211000 Rh1BG213000 Rh1BG213500 Rh1BG282800 Rh1BG288400 Rh1BG408100 Rh1BG408200 Rh1BG408400 Rh1BG408700 Rh1CG026300 Rh1CG028300 Rh1CG224100 Rh1CG226000 Rh1CG226100 Rh1CG229300 Rh1CG229400 Rh1CG245900 Rh1CG299200 Rh1CG299400 Rh1CG299500 Rh1CG303300 Rh1CG305100 Rh1CG422500 Rh1CG422600 Rh1CG422700 Rh1CG422800 Rh1CG422900 Rh1CG423100 Rh1CG423300 Rh1CG423400 Rh1CG426300 Rh1CG426600 Rh1DG239300 Rh1DG239600 Rh1DG258300 Rh1DG314200 Rh1DG314300 Rh1DG314400 Rh1DG320000 Rh1DG439200 Rh1DG439400 Rh1DG439500 Rh1DG439700 Rh1DG440000 Rh1DG443800 Rh2AG261800 Rh2BG080900 Rh2CG083300 Rh2DG078900 Rh2DG270000 Rh2DG270100 Rh3AG128400 Rh3AG130100 Rh3AG130500 Rh3AG332500 Rh3AG332600 Rh3AG332800 Rh3BG149700 Rh3BG151500 Rh3CG151400 Rh3CG354500 Rh3CG366800 Rh3DG150500 Rh3DG152200 Rh4AG101400 Rh4AG102900 Rh4AG148300 Rh4AG148600 Rh4BG098000 Rh4CG111100 Rh4CG111300 Rh4CG155100 Rh4DG094800 Rh5AG213600 Rh5AG346900 Rh5AG347000 Rh5BG357500 Rh5BG357700 Rh5BG485400 Rh5CG383100 Rh5CG383200 Rh5CG383300 Rh5CG509900 Rh5DG373000 Rh5DG373200 Rh6BG054300 Rh6BG126300 Rh6CG125100 Rh6CG185300 Rh6DG177000 Rh7AG276100 Rh7AG276200 Rh7BG230500 Rh7BG270500 Rh7BG364000 Rh7CG250100 Rh7CG295200 Rh7CG295300 Rh7DG389700
rosa_wichuraiana Rw0G001190 Rw0G010680 Rw0G013360 Rw0G014310 Rw0G014890 Rw0G020310 Rw0G021350 Rw0G022510 Rw1G003360 Rw1G004330 Rw1G006930 Rw1G008310 Rw1G021090 Rw1G021150 Rw1G021210 Rw1G023200 Rw1G023210 Rw1G028340 Rw1G028350 Rw1G028990 Rw1G032510 Rw1G039370 Rw1G039400 Rw1G039410 Rw1G039420 Rw1G039430 Rw2G006700 Rw2G020550 Rw2G020580 Rw3G012130 Rw3G012300 Rw3G012310 Rw3G028220 Rw3G029230 Rw5G021600 Rw5G032790 Rw6G011240 Rw7G027670 Rw7G032780

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 2042
AatII GACGTC 2 cut(s) 1673, 3510
AccB1I GGYRCC 1 cut(s) 1924
AccI GTMKAC 7 cut(s) 986, 1067, 1382, 1443, 1994, 2046, 2997
AccII CGCG 1 cut(s) 291
AccIII TCCGGA 1 cut(s) 2853
AciI CCGC 6 cut(s) 5, 289, 291, 3184, 3266, 3831
AclI AACGTT 1 cut(s) 486
AclWI GGATC 9 cut(s) 116, 129, 883, 1477, 1784, 1854, 2396, 2460, 3627
AcoI YGGCCR 4 cut(s) 1529, 2729, 2820, 3678
AcuI CTGAAG 4 cut(s) 30, 69, 938, 2943
AcvI CACGTG 1 cut(s) 2958
AcyI GRCGYC 3 cut(s) 362, 1670, 3507
AfiI CCNNNNNNNGG 2 cut(s) 118, 2978
AflII CTTAAG 1 cut(s) 149
AflIII ACRYGT 4 cut(s) 2955, 2957, 3545, 3707
AgeI ACCGGT 1 cut(s) 3374
AjiI CACGTC 1 cut(s) 3548
AjnI CCWGG 3 cut(s) 1160, 1869, 2464
AjuI GAANNNNNNNTTGG 2 cut(s) 1418, 1450
Alw21I GWGCWC 2 cut(s) 3213, 3283
Alw26I GTCTC 5 cut(s) 1090, 1661, 2092, 2781, 3149
AlwI GGATC 9 cut(s) 116, 129, 883, 1477, 1784, 1854, 2396, 2460, 3627
AlwNI CAGNNNCTG 1 cut(s) 2771
Ama87I CYCGRG 3 cut(s) 1367, 1979, 3467
Aor13HI TCCGGA 1 cut(s) 2853
ApeKI GCWGC 3 cut(s) 1211, 2768, 3263
AseI ATTAAT 1 cut(s) 3341
AsiGI ACCGGT 1 cut(s) 3374
Asp700I GAANNNNTTC 6 cut(s) 908, 1518, 1800, 2412, 2718, 2861
AspS9I GGNCC 2 cut(s) 2589, 3628
AsuHPI GGTGA 6 cut(s) 740, 2036, 2447, 3068, 3425, 3656
AsuII TTCGAA 1 cut(s) 253
AvaI CYCGRG 3 cut(s) 1367, 1979, 3467
BalI TGGCCA 3 cut(s) 1531, 2731, 3680
BamHI GGATCC 1 cut(s) 121
BanI GGYRCC 1 cut(s) 1924
BanII GRGCYC 2 cut(s) 1374, 3283
BarI GAAGNNNNNNTAC 4 cut(s) 381, 413, 1506, 1538
BauI CACGAG 1 cut(s) 513
BbrPI CACGTG 1 cut(s) 2958
BbsI GAAGAC 3 cut(s) 2061, 2462, 3332
Bbv12I GWGCWC 2 cut(s) 3213, 3283
BbvCI CCTCAGC 1 cut(s) 3756
BbvI GCAGC 3 cut(s) 1223, 2780, 3275
BceAI ACGGC 3 cut(s) 2835, 2893, 3686
BcgI CGANNNNNNTGC 2 cut(s) 3602, 3636
BciT130I CCWGG 3 cut(s) 1162, 1871, 2466
BciVI GTATCC 5 cut(s) 1216, 1222, 1465, 2077, 3449
BclI TGATCA 3 cut(s) 745, 1642, 2425
BcoDI GTCTC 5 cut(s) 1090, 1661, 2092, 2781, 3149
BfaI CTAG 8 cut(s) 630, 1674, 2102, 2286, 3284, 3530, 3587, 3837
BfmI CTRYAG 3 cut(s) 2763, 3273, 3511
BfrI CTTAAG 1 cut(s) 149
BfuI GTATCC 5 cut(s) 1216, 1222, 1465, 2077, 3449
BglII AGATCT 4 cut(s) 263, 452, 2081, 3020
BisI GCNGC 4 cut(s) 5, 1212, 2769, 3264
BlsI GCNGC 4 cut(s) 6, 1213, 2770, 3265
BmcAI AGTACT 2 cut(s) 71, 3049
Bme1390I CCNGG 3 cut(s) 1162, 1871, 2466
BmeT110I CYCGRG 3 cut(s) 1367, 1979, 3467
BmgBI CACGTC 1 cut(s) 3548
BmgT120I GGNCC 2 cut(s) 2589, 3628
BmiI GGNNCC 3 cut(s) 123, 1926, 2283
BmrFI CCNGG 3 cut(s) 1162, 1871, 2466
BmrI ACTGGG 1 cut(s) 954
BmsI GCATC 5 cut(s) 36, 104, 534, 2520, 2683
BmuI ACTGGG 1 cut(s) 954
BpiI GAAGAC 3 cut(s) 2061, 2462, 3332
BpmI CTGGAG 2 cut(s) 52, 3283
Bpu10I CCTNAGC 1 cut(s) 3756
Bpu14I TTCGAA 1 cut(s) 253
BpuEI CTTGAG 5 cut(s) 469, 1082, 1200, 2276, 3785
Bsa29I ATCGAT 1 cut(s) 3114
BsaAI YACGTR 2 cut(s) 2342, 2958
BsaBI GATNNNNATC 3 cut(s) 1845, 2065, 2451
BsaHI GRCGYC 3 cut(s) 362, 1670, 3507
BsaJI CCNNGG 6 cut(s) 289, 940, 1869, 2475, 3443, 3741
BsaWI WCCGGW 3 cut(s) 300, 2853, 3374
BsaXI ACNNNNNCTCC 8 cut(s) 565, 595, 968, 998, 3122, 3152, 3281, 3311
Bsc4I CCNNNNNNNGG 2 cut(s) 118, 2978
Bse118I RCCGGY 1 cut(s) 3374
Bse1I ACTGG 7 cut(s) 77, 960, 1012, 2037, 2542, 2823, 3058
Bse3DI GCAATG 2 cut(s) 90, 1653
Bse8I GATNNNNATC 3 cut(s) 1845, 2065, 2451
BseAI TCCGGA 1 cut(s) 2853
BseBI CCWGG 3 cut(s) 1162, 1871, 2466
BseCI ATCGAT 1 cut(s) 3114
BseDI CCNNGG 6 cut(s) 289, 940, 1869, 2475, 3443, 3741
BseGI GGATG 8 cut(s) 160, 309, 477, 722, 977, 2800, 3066, 3581
BseJI GATNNNNATC 3 cut(s) 1845, 2065, 2451
BseLI CCNNNNNNNGG 2 cut(s) 118, 2978
BseMI GCAATG 2 cut(s) 90, 1653
BseMII CTCAG 4 cut(s) 1377, 2763, 3318, 3747
BseNI ACTGG 7 cut(s) 77, 960, 1012, 2037, 2542, 2823, 3058
BseRI GAGGAG 3 cut(s) 2294, 2324, 3773
BseXI GCAGC 3 cut(s) 1223, 2780, 3275
BsgI GTGCAG 3 cut(s) 984, 1515, 2127
Bsh1236I CGCG 1 cut(s) 291
BshNI GGYRCC 1 cut(s) 1924
BshTI ACCGGT 1 cut(s) 3374
BshVI ATCGAT 1 cut(s) 3114
BsiHKAI GWGCWC 2 cut(s) 3213, 3283
BsiHKCI CYCGRG 3 cut(s) 1367, 1979, 3467
BsiSI CCGG 3 cut(s) 301, 2854, 3375
BsiWI CGTACG 1 cut(s) 2887
BslFI GGGAC 1 cut(s) 320
BslI CCNNNNNNNGG 2 cut(s) 118, 2978
BsmAI GTCTC 5 cut(s) 1090, 1661, 2092, 2781, 3149
BsmBI CGTCTC 1 cut(s) 1661
BsmFI GGGAC 1 cut(s) 320
BsmI GAATGC 4 cut(s) 1152, 2537, 2903, 3802
BsoBI CYCGRG 3 cut(s) 1367, 1979, 3467
Bsp119I TTCGAA 1 cut(s) 253
Bsp1286I GDGCHC 3 cut(s) 1374, 3213, 3283
Bsp13I TCCGGA 1 cut(s) 2853
Bsp1407I TGTACA 2 cut(s) 618, 3364
Bsp19I CCATGG 1 cut(s) 3741
BspACI CCGC 6 cut(s) 5, 289, 291, 3184, 3266, 3831
BspCNI CTCAG 4 cut(s) 1378, 2764, 3317, 3748
BspDI ATCGAT 1 cut(s) 3114
BspEI TCCGGA 1 cut(s) 2853
BspFNI CGCG 1 cut(s) 291
BspHI TCATGA 2 cut(s) 742, 3088
BspLI GGNNCC 3 cut(s) 123, 1926, 2283
BspMAI CTGCAG 1 cut(s) 3277
BspPI GGATC 9 cut(s) 116, 129, 883, 1477, 1784, 1854, 2396, 2460, 3627
BspQI GCTCTTC 3 cut(s) 399, 833, 3494
BspT104I TTCGAA 1 cut(s) 253
BspT107I GGYRCC 1 cut(s) 1924
BspTI CTTAAG 1 cut(s) 149
BsrDI GCAATG 2 cut(s) 90, 1653
BsrFI RCCGGY 1 cut(s) 3374
BsrGI TGTACA 2 cut(s) 618, 3364
BsrI ACTGG 7 cut(s) 77, 960, 1012, 2037, 2542, 2823, 3058
BssAI RCCGGY 1 cut(s) 3374
BssECI CCNNGG 6 cut(s) 289, 940, 1869, 2475, 3443, 3741
BssNAI GTATAC 3 cut(s) 987, 1383, 1995
BssNI GRCGYC 3 cut(s) 362, 1670, 3507
BssSI CACGAG 1 cut(s) 513
BssT1I CCWWGG 4 cut(s) 940, 2475, 3443, 3741
Bst1107I GTATAC 3 cut(s) 987, 1383, 1995
Bst2BI CACGAG 1 cut(s) 513
Bst2UI CCWGG 3 cut(s) 1162, 1871, 2466
Bst4CI ACNGT 8 cut(s) 853, 908, 1563, 2175, 2995, 3047, 3364, 3811
Bst6I CTCTTC 7 cut(s) 399, 833, 1260, 1439, 1458, 2070, 3494
BstACI GRCGYC 3 cut(s) 362, 1670, 3507
BstAFI CTTAAG 1 cut(s) 149
BstAPI GCANNNNNTGC 1 cut(s) 508
BstAUI TGTACA 2 cut(s) 618, 3364
BstBAI YACGTR 2 cut(s) 2342, 2958
BstBI TTCGAA 1 cut(s) 253
BstC8I GCNNGC 5 cut(s) 1013, 2535, 3695, 3699, 3780
BstDEI CTNAG 7 cut(s) 1386, 1911, 2243, 2772, 3304, 3460, 3756
BstDSI CCRYGG 2 cut(s) 289, 3741
BstEII GGTNACC 2 cut(s) 2630, 3056
BstF5I GGATG 8 cut(s) 160, 309, 477, 722, 977, 2800, 3066, 3581
BstFNI CGCG 1 cut(s) 291
BstMAI GTCTC 5 cut(s) 1090, 1661, 2092, 2781, 3149
BstMWI GCNNNNNNNGC 4 cut(s) 508, 1616, 2228, 3272
BstNI CCWGG 3 cut(s) 1162, 1871, 2466
BstNSI RCATGY 6 cut(s) 702, 1090, 2509, 3295, 3490, 3711
BstPI GGTNACC 2 cut(s) 2630, 3056
BstSCI CCNGG 3 cut(s) 1160, 1869, 2464
BstSFI CTRYAG 3 cut(s) 2763, 3273, 3511
BstSNI TACGTA 1 cut(s) 2342
BstUI CGCG 1 cut(s) 291
BstV1I GCAGC 3 cut(s) 1223, 2780, 3275
BstV2I GAAGAC 3 cut(s) 2061, 2462, 3332
BstX2I RGATCY 6 cut(s) 121, 263, 452, 1469, 2081, 3020
BstXI CCANNNNNNTGG 1 cut(s) 2830
BstYI RGATCY 6 cut(s) 121, 263, 452, 1469, 2081, 3020
BstZ17I GTATAC 3 cut(s) 987, 1383, 1995
Bsu15I ATCGAT 1 cut(s) 3114
BsuI GTATCC 5 cut(s) 1216, 1222, 1465, 2077, 3449
BsuTUI ATCGAT 1 cut(s) 3114
BtgI CCRYGG 2 cut(s) 289, 3741
BtrI CACGTC 1 cut(s) 3548
BtsCI GGATG 8 cut(s) 160, 309, 477, 722, 977, 2800, 3066, 3581
BtsIMutI CAGTG 6 cut(s) 808, 967, 2151, 2830, 3360, 3615
Cac8I GCNNGC 5 cut(s) 1013, 2535, 3695, 3699, 3780
CaiI CAGNNNCTG 1 cut(s) 2771
CciI TCATGA 2 cut(s) 742, 3088
Cfr10I RCCGGY 1 cut(s) 3374
Cfr13I GGNCC 2 cut(s) 2589, 3628
Cfr42I CCGCGG 1 cut(s) 292
ClaI ATCGAT 1 cut(s) 3114
CseI GACGC 1 cut(s) 351
CsiI ACCWGGT 1 cut(s) 1160
CspAI ACCGGT 1 cut(s) 3374
DdeI CTNAG 7 cut(s) 1386, 1911, 2243, 2772, 3304, 3460, 3756
DrdI GACNNNNNNGTC 1 cut(s) 2042
DseDI GACNNNNNNGTC 1 cut(s) 2042
EaeI YGGCCR 4 cut(s) 1529, 2729, 2820, 3678
Eam1104I CTCTTC 7 cut(s) 399, 833, 1260, 1439, 1458, 2070, 3494
EarI CTCTTC 7 cut(s) 399, 833, 1260, 1439, 1458, 2070, 3494
Ecl136II GAGCTC 1 cut(s) 3281
Eco105I TACGTA 1 cut(s) 2342
Eco130I CCWWGG 4 cut(s) 940, 2475, 3443, 3741
Eco147I AGGCCT 1 cut(s) 3736
Eco24I GRGCYC 2 cut(s) 1374, 3283
Eco32I GATATC 1 cut(s) 373
Eco53kI GAGCTC 1 cut(s) 3281
Eco57I CTGAAG 4 cut(s) 30, 69, 938, 2943
Eco72I CACGTG 1 cut(s) 2958
Eco88I CYCGRG 3 cut(s) 1367, 1979, 3467
Eco91I GGTNACC 2 cut(s) 2630, 3056
EcoICRI GAGCTC 1 cut(s) 3281
EcoO65I GGTNACC 2 cut(s) 2630, 3056
EcoRI GAATTC 1 cut(s) 2114
EcoRII CCWGG 3 cut(s) 1160, 1869, 2464
EcoRV GATATC 1 cut(s) 373
EcoT14I CCWWGG 4 cut(s) 940, 2475, 3443, 3741
EcoT22I ATGCAT 1 cut(s) 757
EcoT38I GRGCYC 2 cut(s) 1374, 3283
ErhI CCWWGG 4 cut(s) 940, 2475, 3443, 3741
Esp3I CGTCTC 1 cut(s) 1661
FalI AAGNNNNNCTT 2 cut(s) 1418, 1450
FaqI GGGAC 1 cut(s) 320
FauNDI CATATG 1 cut(s) 587
FbaI TGATCA 3 cut(s) 745, 1642, 2425
FblI GTMKAC 7 cut(s) 986, 1067, 1382, 1443, 1994, 2046, 2997
Fnu4HI GCNGC 4 cut(s) 5, 1212, 2769, 3264
FokI GGATG 8 cut(s) 167, 316, 484, 729, 984, 2807, 3053, 3568
FriOI GRGCYC 2 cut(s) 1374, 3283
Fsp4HI GCNGC 4 cut(s) 5, 1212, 2769, 3264
FspBI CTAG 8 cut(s) 630, 1674, 2102, 2286, 3284, 3530, 3587, 3837
GluI GCNGC 4 cut(s) 5, 1212, 2769, 3264
GsuI CTGGAG 2 cut(s) 52, 3283
HapII CCGG 3 cut(s) 301, 2854, 3375
HgaI GACGC 1 cut(s) 351
Hin1I GRCGYC 3 cut(s) 362, 1670, 3507
HincII GTYRAC 2 cut(s) 3077, 3435
HindII GTYRAC 2 cut(s) 3077, 3435
HindIII AAGCTT 1 cut(s) 1829
HpaII CCGG 3 cut(s) 301, 2854, 3375
HphI GGTGA 6 cut(s) 740, 2036, 2447, 3068, 3425, 3656
Hpy99I CGWCG 3 cut(s) 1397, 1941, 3509
HpyAV CCTTC 9 cut(s) 1272, 1915, 2654, 2672, 2918, 2932, 2972, 3404, 3747
HpyCH4III ACNGT 8 cut(s) 853, 908, 1563, 2175, 2995, 3047, 3364, 3811
HpyF10VI GCNNNNNNNGC 4 cut(s) 508, 1616, 2228, 3272
HpyF3I CTNAG 7 cut(s) 1386, 1911, 2243, 2772, 3304, 3460, 3756
Hsp92I GRCGYC 3 cut(s) 362, 1670, 3507
Kpn2I TCCGGA 1 cut(s) 2853
Ksp22I TGATCA 3 cut(s) 745, 1642, 2425
KspI CCGCGG 1 cut(s) 292
LguI GCTCTTC 3 cut(s) 399, 833, 3494
LmnI GCTCC 7 cut(s) 644, 1020, 2281, 3278, 3383, 3535, 3760
Lsp1109I GCAGC 3 cut(s) 1223, 2780, 3275
LweI GCATC 5 cut(s) 36, 104, 534, 2520, 2683
MabI ACCWGGT 1 cut(s) 1160
MaeI CTAG 8 cut(s) 630, 1674, 2102, 2286, 3284, 3530, 3587, 3837
MfeI CAATTG 3 cut(s) 1091, 1587, 2199
MflI RGATCY 6 cut(s) 121, 263, 452, 1469, 2081, 3020
MhlI GDGCHC 3 cut(s) 1374, 3213, 3283
MlsI TGGCCA 3 cut(s) 1531, 2731, 3680
MluNI TGGCCA 3 cut(s) 1531, 2731, 3680
MlyI GAGTC 7 cut(s) 454, 574, 1073, 2267, 2783, 3082, 3563
MmeI TCCRAC 1 cut(s) 3222
Mox20I TGGCCA 3 cut(s) 1531, 2731, 3680
Mph1103I ATGCAT 1 cut(s) 757
MroI TCCGGA 1 cut(s) 2853
MroXI GAANNNNTTC 6 cut(s) 908, 1518, 1800, 2412, 2718, 2861
MscI TGGCCA 3 cut(s) 1531, 2731, 3680
MslI CAYNNNNRTG 2 cut(s) 3123, 3318
Msp20I TGGCCA 3 cut(s) 1531, 2731, 3680
MspA1I CMGCKG 3 cut(s) 291, 2771, 3266
MspCI CTTAAG 1 cut(s) 149
MspI CCGG 3 cut(s) 301, 2854, 3375
MspR9I CCNGG 3 cut(s) 1162, 1871, 2466
MunI CAATTG 3 cut(s) 1091, 1587, 2199
Mva1269I GAATGC 4 cut(s) 1152, 2537, 2903, 3802
MvaI CCWGG 3 cut(s) 1162, 1871, 2466
MvnI CGCG 1 cut(s) 291
MwoI GCNNNNNNNGC 4 cut(s) 508, 1616, 2228, 3272
NcoI CCATGG 1 cut(s) 3741
NdeI CATATG 1 cut(s) 587
NlaIV GGNNCC 3 cut(s) 123, 1926, 2283
NmuCI GTSAC 6 cut(s) 443, 1770, 2382, 2825, 3056, 3703
NsiI ATGCAT 1 cut(s) 757
NspI RCATGY 6 cut(s) 702, 1090, 2509, 3295, 3490, 3711
NspV TTCGAA 1 cut(s) 253
PaeR7I CTCGAG 2 cut(s) 1367, 1979
PagI TCATGA 2 cut(s) 742, 3088
PceI AGGCCT 1 cut(s) 3736
PciI ACATGT 1 cut(s) 3707
PciSI GCTCTTC 3 cut(s) 399, 833, 3494
PcsI WCGNNNNNNNCGW 1 cut(s) 2883
PctI GAATGC 4 cut(s) 1152, 2537, 2903, 3802
PdmI GAANNNNTTC 6 cut(s) 908, 1518, 1800, 2412, 2718, 2861
PfeI GAWTC 9 cut(s) 269, 556, 1081, 1429, 1481, 2186, 2353, 3245, 3479
Pfl23II CGTACG 1 cut(s) 2887
PinAI ACCGGT 1 cut(s) 3374
PkrI GCNGC 4 cut(s) 6, 1213, 2770, 3265
PleI GAGTC 7 cut(s) 454, 574, 1072, 2266, 2782, 3081, 3562
PmaCI CACGTG 1 cut(s) 2958
PmlI CACGTG 1 cut(s) 2958
PpsI GAGTC 7 cut(s) 454, 574, 1072, 2266, 2782, 3081, 3562
Ppu21I YACGTR 2 cut(s) 2342, 2958
PscI ACATGT 1 cut(s) 3707
PshBI ATTAAT 1 cut(s) 3341
Psp124BI GAGCTC 1 cut(s) 3283
Psp1406I AACGTT 1 cut(s) 486
Psp6I CCWGG 3 cut(s) 1160, 1869, 2464
PspCI CACGTG 1 cut(s) 2958
PspEI GGTNACC 2 cut(s) 2630, 3056
PspGI CCWGG 3 cut(s) 1160, 1869, 2464
PspLI CGTACG 1 cut(s) 2887
PspN4I GGNNCC 3 cut(s) 123, 1926, 2283
PspPI GGNCC 2 cut(s) 2589, 3628
PspXI VCTCGAGB 2 cut(s) 1367, 1979
PstI CTGCAG 1 cut(s) 3277
PstNI CAGNNNCTG 1 cut(s) 2771
PsuI RGATCY 6 cut(s) 121, 263, 452, 1469, 2081, 3020
PvuII CAGCTG 1 cut(s) 2771
RseI CAYNNNNRTG 2 cut(s) 3123, 3318
SacI GAGCTC 1 cut(s) 3283
SacII CCGCGG 1 cut(s) 292
SapI GCTCTTC 3 cut(s) 399, 833, 3494
SatI GCNGC 4 cut(s) 5, 1212, 2769, 3264
Sau96I GGNCC 2 cut(s) 2589, 3628
ScaI AGTACT 2 cut(s) 71, 3049
SchI GAGTC 7 cut(s) 454, 574, 1073, 2267, 2783, 3082, 3563
ScrFI CCNGG 3 cut(s) 1162, 1871, 2466
SduI GDGCHC 3 cut(s) 1374, 3213, 3283
SexAI ACCWGGT 1 cut(s) 1160
SfaNI GCATC 5 cut(s) 36, 104, 534, 2520, 2683
SfcI CTRYAG 3 cut(s) 2763, 3273, 3511
Sfr274I CTCGAG 2 cut(s) 1367, 1979
Sfr303I CCGCGG 1 cut(s) 292
SfuI TTCGAA 1 cut(s) 253
SgrBI CCGCGG 1 cut(s) 292
SlaI CTCGAG 2 cut(s) 1367, 1979
SmiMI CAYNNNNRTG 2 cut(s) 3123, 3318
SmlI CTYRAG 8 cut(s) 149, 448, 1061, 1215, 1367, 1979, 2255, 3764
SmoI CTYRAG 8 cut(s) 149, 448, 1061, 1215, 1367, 1979, 2255, 3764
SnaBI TACGTA 1 cut(s) 2342
SseBI AGGCCT 1 cut(s) 3736
SsiI CCGC 6 cut(s) 5, 289, 291, 3184, 3266, 3831
SspI AATATT 1 cut(s) 1246
SspMI CTAG 8 cut(s) 630, 1674, 2102, 2286, 3284, 3530, 3587, 3837
SstI GAGCTC 1 cut(s) 3283
StuI AGGCCT 1 cut(s) 3736
StyD4I CCNGG 3 cut(s) 1160, 1869, 2464
StyI CCWWGG 4 cut(s) 940, 2475, 3443, 3741
TaaI ACNGT 8 cut(s) 853, 908, 1563, 2175, 2995, 3047, 3364, 3811
TatI WGTACW 7 cut(s) 69, 319, 601, 618, 2544, 3047, 3364
TauI GCSGC 1 cut(s) 7
TfiI GAWTC 9 cut(s) 269, 556, 1081, 1429, 1481, 2186, 2353, 3245, 3479
TscAI CASTG 6 cut(s) 808, 967, 2158, 2830, 3367, 3615
TseFI GTSAC 6 cut(s) 443, 1770, 2382, 2825, 3056, 3703
TseI GCWGC 3 cut(s) 1211, 2768, 3263
Tsp45I GTSAC 6 cut(s) 443, 1770, 2382, 2825, 3056, 3703
TspGWI ACGGA 7 cut(s) 1241, 1461, 1789, 1954, 2073, 2401, 2807
TspRI CASTG 6 cut(s) 808, 967, 2158, 2830, 3367, 3615
Vha464I CTTAAG 1 cut(s) 149
VspI ATTAAT 1 cut(s) 3341
XbaI TCTAGA 2 cut(s) 1673, 3836
XceI RCATGY 6 cut(s) 702, 1090, 2509, 3295, 3490, 3711
XcmI CCANNNNNNNNNTGG 1 cut(s) 3638
XhoI CTCGAG 2 cut(s) 1367, 1979
XmiI GTMKAC 7 cut(s) 986, 1067, 1382, 1443, 1994, 2046, 2997
XmnI GAANNNNTTC 6 cut(s) 908, 1518, 1800, 2412, 2718, 2861
XspI CTAG 8 cut(s) 630, 1674, 2102, 2286, 3284, 3530, 3587, 3837
ZraI GACGTC 2 cut(s) 1671, 3508
ZrmI AGTACT 2 cut(s) 71, 3049
Zsp2I ATGCAT 1 cut(s) 757
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.