RchiOBHm_Chr1g0381231

Cyclic nucleotide-gated ion channel 1-like

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
Physical Location & Seq
Reverse (-)
66654400 .. 66657017
2618 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ60443

Sequence Viewer

Length: 2001 bp
ATGGCTAACCCTGAAGTAGCTTTAGATGTACAGCACACGGAAGAAGAGAAATCGCAGAGATCGGTTACTGATGAAGGAGATACAAGAACAACTGGAGGAAACTCCGATTCGATCCACCCCCCCGGCTGGTTCTCCTTTAACAAAATATTCAATCTGAAAGGGAAGTTCCTTCCGATGTGGAACAACATGTTTGTAGCATCTTGTGTGTTTGCTGTCTCCTTTGATCCTCTGTTCTTCTACACTCCAGTCATAAACGAGAAGAAGAAGTGTGTATATTTTGACACAAGGTTGAAGGTCATAGCCCTTGTCTTAAGGTTACTCACAGATCACTTCTACATTGCGGACATTATTATGCGAATTTTGATTAGTATACTTAAAACCAAGTCATCCAAGGCTTCTGGGGTGACCACACAAGCGGAAGCTCCTAATTCGAAAGGGAAGAATGTTTTTGCAATAGCTAAGAGAGCTTGGGAGAAAGCTAATAGATCATACATCCTGATTGACATTTTAGCTATTCTTCCCATACCCCAGGTGGGAATGTTCGTTTTCTTTTCGAAAATGAAGGGTCCGGTATGTTCGAAAGAAAGGAGGCTTTTCGACATTCTTATTTTGCTCCAATTTGTCCCACGCGTTCTTCCTGTTTACTTATTGTGCAGAGAACGTAAGAAAACTCTTAATAAAGCAAGCATGTGGACTAAAGGTGTTTTCAATTTCTTTCTATACATCCTTGCAAGTCATGTACTCGGAGCTCTTTGGTACTTTTTTGCCATTCAACGAGAGATGGATTGTTGGCATTTTGTTTGCCAACGTCACAAGGGATGTCAACCTGGTGCCTTTAGTTGTAGGGAACCACGAAATAGATTGAGAACTATCCCATCGTTAGACAAAGAATGTCCGATAAACCTATCGGAAGAAATGAAAGGAAAGCCCTTTAATTTTGGTATATTTGCTGATGCGCTTGACTACGGCCTAGTGCAGTCGACTGATTTTCCTCAAAAATTCTTGAATTGTTTCTGGTGGGGGCTGCGAAATCTGAGCTCTCTTGGTCAAAACCTCCATACAAGTACCTATGCATGGGAAAACCTCTTTGCTGTGTTTATTTCCATTATAGGCTTGCTATTGTTTATATATCTCATCGGAAATTTGCAGACATATTTGCAGTTTGCAACTACAAGATCAGAGAAGATTAGACGGAAGATGAAAACGAAAAACTTAGAGGTTGATTTGTGGCTATCTAGAAAAGGACTGCCTAGCAATTTGAAGATAGTGATAATGCAATTCATACAACAAAAACTTGAACAGAACAATGATGTTCAAGTTGAGAACATCCTCTCTGTTCTTCCTTCAGCACATAGTAAATATATCTTGCGCTATCTTCGTTTGGCTACACTTAAGAAAGTGCCAATGCTTCAAACTATGGGGGTAAGACTGCTGAAAGCAATCTGTGAGCACCTCGAGCCGGTGGACTATCCTGAGGACAGTTGCATTATTCAAGAGGGAGAGCCACTCCATAAGATGATTTTCATCACACATGGCACAGTACATACCTACAAGACCAATGGTAAAGGTGGAAAAATTGGTTCCGAGTTTCTTGAGAAAGGGGACTTCTATGGATCAGAAGAGCTTCTCAATTGGGCATCAAAGTTTAGCTCTTACAAGGACTTACCAATCTCAACCAGAATGGTTAAGCCTGTCACTAAAGTCGAAGCCTTTGCACTGAGCACAGACGACTTGAAGAGTATAGCCATTAAGTACTGGTGGAATTTCACCAAGAAGAAGGATCTAGGGGATTTCGACCAGTCTCTGTTGGAGGAGTATGCAGTATCTTCCATAGAAAAAGAAATTCGTCGCCGCAGGCAAGGGAAAAAGAAGCATACAATAAGGTCTCTCAATAAGTTGGCTACTGATCAGGGTAGTGCTAGCCAGAAGTTGCAAAAGGTCATCAGTAAGGTCATGAGGGATCAGCTACCTTCACCAGTTGGTGCTCTAGGTGGCAGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

666

Amino Acids

76.43

Weight (kDa)

9.57

Isoelectric Point (pI)

42.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ion_trans PF00520 59 - 393 5.2e-11 Ion transport protein
cNMP_binding PF00027 488 - 544 2.1e-07 Cyclic nucleotide-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000017)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07351 FvH4_1g11800 FvH4_1g11800 FvH4_1g11800 FvH4_1g11800 FvH4_1g11800 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_4g14360 FvH4_6g13561 FvH4_6g13562 FvH4_6g13580 FvH4_6g13590 FvH4_6g13590 FvH4_6g13590 FvH4_6g13731 FvH4_6g13770 FvH4_6g13800 FvH4_6g13800 FvH4_6g13860 FvH4_6g13870 FvH4_6g13870 FvH4_6g13870 FvH4_6g13870 FvH4_6g13870 FvH4_6g13890 FvH4_6g33801 FvH4_7g13020 FvH4_7g13270 FvH4_7g13270 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g14580 FvH4_7g14580 FvH4_7g14580 FvH4_7g14600 FvH4_7g14600 FvH4_7g20030 FvH4_7g20510 FvH4_7g20510 FvH4_7g20510 FvH4_7g20670 FvH4_7g20670 FvH4_7g20670 FvH4_7g20670 FvH4_7g20690 FvH4_7g20690 FvH4_7g31930 FvH4_7g31930 FvH4_7g31940 FvH4_7g31940
malus_domestica MD01G1115700.v1.1 MD01G1115800.v1.1 MD01G1116600.v1.1 MD01G1116700.v1.1 MD01G1117000.v1.1 MD01G1225000.v1.1 MD02G1077900.v1.1 MD02G1078000.v1.1 MD02G1078200.v1.1 MD02G1078400.v1.1 MD02G1084300.v1.1 MD04G1004700.v1.1 MD04G1123100.v1.1 MD04G1123200.v1.1 MD04G1128000.v1.1 MD04G1128400.v1.1 MD05G1299700.v1.1 MD05G1300000.v1.1 MD07G1184000.v1.1 MD07G1292300.v1.1 MD08G1214800.v1.1
prunus_persica Prupe.1G205100_v2.0.a1 Prupe.1G205100_v2.0.a1 Prupe.1G205200_v2.0.a1 Prupe.2G222300_v2.0.a1 Prupe.2G223300_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223600_v2.0.a1 Prupe.2G223600_v2.0.a1 Prupe.2G223600_v2.0.a1 Prupe.2G223700_v2.0.a1 Prupe.2G223700_v2.0.a1 Prupe.2G223700_v2.0.a1 Prupe.2G223700_v2.0.a1 Prupe.2G223800_v2.0.a1 Prupe.2G223900_v2.0.a1 Prupe.2G224000_v2.0.a1 Prupe.5G162000_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G291000_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G210400_v2.0.a1 Prupe.7G210600_v2.0.a1 Prupe.7G210700_v2.0.a1 Prupe.7G210800_v2.0.a1 Prupe.7G210900_v2.0.a1 Prupe.8G097600_v2.0.a1 Prupe.8G097800_v2.0.a1 Prupe.8G097800_v2.0.a1
pyrus_communis pycom01g14430 pycom01g14440 pycom01g23130 pycom01g23160 pycom01g23330 pycom02g06210 pycom02g06220 pycom02g06250 pycom02g06270 pycom02g06710 pycom03g05360 pycom03g05380 pycom04g11470 pycom04g11480 pycom04g11520 pycom04g11560 pycom04g11600 pycom04g11610 pycom04g11650 pycom04g11660 pycom04g11670 pycom05g27790 pycom07g17630 pycom08g20960 pycom126g00020 pycom126g00030
rosa_chinensis RchiOBHm_Chr1g0318251 RchiOBHm_Chr1g0318731 RchiOBHm_Chr1g0339101 RchiOBHm_Chr1g0339111 RchiOBHm_Chr1g0347151 RchiOBHm_Chr1g0347161 RchiOBHm_Chr1g0347221 RchiOBHm_Chr1g0352401 RchiOBHm_Chr1g0352441 RchiOBHm_Chr1g0352461 RchiOBHm_Chr1g0356131 RchiOBHm_Chr1g0363991 RchiOBHm_Chr1g0364791 RchiOBHm_Chr1g0364801 RchiOBHm_Chr1g0364811 RchiOBHm_Chr1g0364851 RchiOBHm_Chr1g0364951 RchiOBHm_Chr1g0370821 RchiOBHm_Chr1g0381221 RchiOBHm_Chr1g0381231 RchiOBHm_Chr1g0381261 RchiOBHm_Chr1g0381271 RchiOBHm_Chr1g0381341 RchiOBHm_Chr1g0381351 RchiOBHm_Chr1g0381391 RchiOBHm_Chr1g0381801 RchiOBHm_Chr1g0381821 RchiOBHm_Chr2g0093241 RchiOBHm_Chr2g0116391 RchiOBHm_Chr3g0466441 RchiOBHm_Chr3g0466631 RchiOBHm_Chr3g0466651 RchiOBHm_Chr3g0496921 RchiOBHm_Chr4g0400441 RchiOBHm_Chr4g0400501 RchiOBHm_Chr4g0400511 RchiOBHm_Chr4g0400691 RchiOBHm_Chr4g0400701 RchiOBHm_Chr4g0404331 RchiOBHm_Chr5g0052101 RchiOBHm_Chr5g0052111 RchiOBHm_Chr5g0052171 RchiOBHm_Chr5g0052181 RchiOBHm_Chr6g0264161 RchiOBHm_Chr6g0265551 RchiOBHm_Chr7g0213571 RchiOBHm_Chr7g0213581
rosa_laevigata RLG00000002796 RLG00000003261 RLG00000007935 RLG00000007936 RLG00000009187 RLG00000014179 RLG00000016381 RLG00000018265 RLG00000024558 RLG00000024574 RLG00000026232 RLG00000026234 RLG00000026236 RLG00000026237 RLG00000027459 RLG00000027461 RLG00000027463 RLG00000027530 RLG00000028103 RLG00000028304 RLG00000028333 RLG00000029214 RLG00000029848 RLG00000029951 RLG00000030115 RLG00000030552 RLG00000033668 RLG00000034840 RLG00000034841 RLG00000034842 RLG00000035830
rosa_multiflora Rmu_sc0000654.1_g000004 Rmu_sc0000675.1_g000025 Rmu_sc0001075.1_g000002 Rmu_sc0001726.1_g000004 Rmu_sc0001772.1_g000061 Rmu_sc0001772.1_g000065 Rmu_sc0002067.1_g000002 Rmu_sc0002183.1_g000001 Rmu_sc0002183.1_g000006 Rmu_sc0002244.1_g000003 Rmu_sc0002313.1_g000004 Rmu_sc0002319.1_g000004 Rmu_sc0002539.1_g000085 Rmu_sc0002636.1_g000004 Rmu_sc0003229.1_g000007 Rmu_sc0003313.1_g000020 Rmu_sc0003546.1_g000007 Rmu_sc0003724.1_g000015 Rmu_sc0003936.1_g000029 Rmu_sc0004191.1_g000067 Rmu_sc0004525.1_g000012 Rmu_sc0005122.1_g000009 Rmu_sc0005255.1_g000040 Rmu_sc0005338.1_g000016 Rmu_sc0005584.1_g000008 Rmu_sc0006460.1_g000013 Rmu_sc0006872.1_g000011 Rmu_sc0006872.1_g000015 Rmu_sc0006872.1_g000016 Rmu_sc0006952.1_g000013 Rmu_sc0007342.1_g000005 Rmu_sc0007342.1_g000006 Rmu_sc0008418.1_g000003 Rmu_sc0008418.1_g000006 Rmu_sc0008636.1_g000007 Rmu_sc0008636.1_g000008 Rmu_sc0009205.1_g000014 Rmu_sc0009365.1_g000014 Rmu_sc0009917.1_g000002 Rmu_sc0019289.1_g000003 Rmu_ssc0000098.1_g000011 Rmu_ssc0000098.1_g000012 Rmu_ssc0000167.1_g000018 Rmu_ssc0000167.1_g000024 Rmu_ssc0000326.1_g000015
rosa_roxburghii Rroxscaffold_166G00440780 Rroxscaffold_176G00431500 Rroxscaffold_1G00015080 Rroxscaffold_1G00027880 Rroxscaffold_1G00027890 Rroxscaffold_1G00027920 Rroxscaffold_2G00127250 Rroxscaffold_2G00148380 Rroxscaffold_3G00219450 Rroxscaffold_3G00232170 Rroxscaffold_3G00232210 Rroxscaffold_3G00242230 Rroxscaffold_3G00242240 Rroxscaffold_3G00244790 Rroxscaffold_3G00245790 Rroxscaffold_4G00278400 Rroxscaffold_4G00278430 Rroxscaffold_4G00278670 Rroxscaffold_4G00278680 Rroxscaffold_4G00278690 Rroxscaffold_4G00278700 Rroxscaffold_4G00278720 Rroxscaffold_4G00291690 Rroxscaffold_4G00292070 Rroxscaffold_4G00292090 Rroxscaffold_4G00292770 Rroxscaffold_4G00302240 Rroxscaffold_4G00302860 Rroxscaffold_4G00311320 Rroxscaffold_4G00311330 Rroxscaffold_4G00320570 Rroxscaffold_4G00322050 Rroxscaffold_4G00329480 Rroxscaffold_4G00329730 Rroxscaffold_5G00345500 Rroxscaffold_5G00345510 Rroxscaffold_5G00360830 Rroxscaffold_5G00360840 Rroxscaffold_6G00393450 Rroxscaffold_6G00404030 Rroxscaffold_6G00414220 Rroxscaffold_6G00414230 Rroxscaffold_6G00414280 Rroxscaffold_6G00414290 Rroxscaffold_6G00414350 Rroxscaffold_6G00414470 Rroxscaffold_7G00202570 Rroxscaffold_7G00203460 Rroxscaffold_7G00203470
rosa_rugosa Rorug01G0020500 Rorug01G0020600 Rorug01G0020700 Rorug01G0143700.1 Rorug01G0225700 Rorug01G0228500 Rorug01G0228600 Rorug01G0228600 Rorug01G0228700 Rorug01G0228800 Rorug01G0228800 Rorug01G0229000 Rorug01G0229300 Rorug01G0229400 Rorug01G0229600 Rorug01G0229700 Rorug01G0232200 Rorug01G0232600 Rorug01G0232600 Rorug01G0311900 Rorug01G0311900 Rorug01G0318400 Rorug01G0318500 Rorug01G0318500 Rorug01G0318500 Rorug01G0427900 Rorug01G0427900 Rorug01G0428000 Rorug01G0428200 Rorug01G0428300 Rorug01G0428400 Rorug01G0431500 Rorug01G0431600 Rorug01G0431600 Rorug02G0033800 Rorug02G0206300 Rorug03G0081900 Rorug03G0083200 Rorug03G0083200 Rorug03G0083300 Rorug04G0025100 Rorug04G0025100 Rorug04G0025200 Rorug04G0025300 Rorug04G0058600 Rorug04G0058700 Rorug04G0058800 Rorug04G0098400 Rorug04G0098500 Rorug05G0274500 Rorug05G0274600 Rorug05G0274800 Rorug06G0008500 Rorug06G0009100 Rorug06G0018000
rosa_samantha Rh1AG031700 Rh1AG036100 Rh1AG089800 Rh1AG239800 Rh1AG239900 Rh1AG242000 Rh1AG242300 Rh1AG245600 Rh1AG262600 Rh1AG319700 Rh1AG319800 Rh1AG319900 Rh1AG327200 Rh1AG451100 Rh1AG451200 Rh1AG451300 Rh1AG451600 Rh1AG451700 Rh1BG027200 Rh1BG071600 Rh1BG090700 Rh1BG211000 Rh1BG213000 Rh1BG213500 Rh1BG282800 Rh1BG288400 Rh1BG408100 Rh1BG408200 Rh1BG408400 Rh1BG408700 Rh1CG026300 Rh1CG028300 Rh1CG224100 Rh1CG226000 Rh1CG226100 Rh1CG229300 Rh1CG229400 Rh1CG245900 Rh1CG299200 Rh1CG299400 Rh1CG299500 Rh1CG303300 Rh1CG305100 Rh1CG422500 Rh1CG422600 Rh1CG422700 Rh1CG422800 Rh1CG422900 Rh1CG423100 Rh1CG423300 Rh1CG423400 Rh1CG426300 Rh1CG426600 Rh1DG239300 Rh1DG239600 Rh1DG258300 Rh1DG314200 Rh1DG314300 Rh1DG314400 Rh1DG320000 Rh1DG439200 Rh1DG439400 Rh1DG439500 Rh1DG439700 Rh1DG440000 Rh1DG443800 Rh2AG261800 Rh2BG080900 Rh2CG083300 Rh2DG078900 Rh2DG270000 Rh2DG270100 Rh3AG128400 Rh3AG130100 Rh3AG130500 Rh3AG332500 Rh3AG332600 Rh3AG332800 Rh3BG149700 Rh3BG151500 Rh3CG151400 Rh3CG354500 Rh3CG366800 Rh3DG150500 Rh3DG152200 Rh4AG101400 Rh4AG102900 Rh4AG148300 Rh4AG148600 Rh4BG098000 Rh4CG111100 Rh4CG111300 Rh4CG155100 Rh4DG094800 Rh5AG213600 Rh5AG346900 Rh5AG347000 Rh5BG357500 Rh5BG357700 Rh5BG485400 Rh5CG383100 Rh5CG383200 Rh5CG383300 Rh5CG509900 Rh5DG373000 Rh5DG373200 Rh6BG054300 Rh6BG126300 Rh6CG125100 Rh6CG185300 Rh6DG177000 Rh7AG276100 Rh7AG276200 Rh7BG230500 Rh7BG270500 Rh7BG364000 Rh7CG250100 Rh7CG295200 Rh7CG295300 Rh7DG389700
rosa_wichuraiana Rw0G001190 Rw0G010680 Rw0G013360 Rw0G014310 Rw0G014890 Rw0G020310 Rw0G021350 Rw0G022510 Rw1G003360 Rw1G004330 Rw1G006930 Rw1G008310 Rw1G021090 Rw1G021150 Rw1G021210 Rw1G023200 Rw1G023210 Rw1G028340 Rw1G028350 Rw1G028990 Rw1G032510 Rw1G039370 Rw1G039400 Rw1G039410 Rw1G039420 Rw1G039430 Rw2G006700 Rw2G020550 Rw2G020580 Rw3G012130 Rw3G012300 Rw3G012310 Rw3G028220 Rw3G029230 Rw5G021600 Rw5G032790 Rw6G011240 Rw7G027670 Rw7G032780

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1986
AccB1I GGYRCC 1 cut(s) 830
AccI GTMKAC 2 cut(s) 370, 980
AccII CGCG 1 cut(s) 630
AciI CCGC 3 cut(s) 341, 416, 1852
AclWI GGATC 5 cut(s) 106, 218, 1621, 1788, 1968
AcsI RAATTY 5 cut(s) 357, 998, 1141, 1762, 1842
AcuI CTGAAG 2 cut(s) 33, 1329
AfaI GTAC 6 cut(s) 30, 741, 758, 1066, 1542, 1754
AfiI CCNNNNNNNGG 4 cut(s) 126, 533, 1074, 1459
AflII CTTAAG 2 cut(s) 310, 1391
AflIII ACRYGT 2 cut(s) 186, 628
AjnI CCWGG 2 cut(s) 528, 826
Alw21I GWGCWC 5 cut(s) 751, 1040, 1452, 1724, 1987
Alw26I GTCTC 3 cut(s) 220, 1806, 1890
AlwI GGATC 5 cut(s) 106, 218, 1621, 1788, 1968
AlwNI CAGNNNCTG 1 cut(s) 1804
Ama87I CYCGRG 1 cut(s) 1454
AoxI GGCC 1 cut(s) 967
ApeKI GCWGC 1 cut(s) 1024
ApoI RAATTY 5 cut(s) 357, 998, 1141, 1762, 1842
Asp700I GAANNNNTTC 2 cut(s) 1010, 1623
AspLEI GCGC 2 cut(s) 958, 1371
AspS9I GGNCC 1 cut(s) 566
AsuC2I CCSGG 1 cut(s) 123
AsuHPI GGTGA 3 cut(s) 415, 1759, 1965
AsuII TTCGAA 3 cut(s) 431, 554, 578
AsuNHI GCTAGC 1 cut(s) 1919
AvaI CYCGRG 1 cut(s) 1454
AvaII GGWCC 1 cut(s) 566
AxyI CCTNAGG 1 cut(s) 1473
BanI GGYRCC 1 cut(s) 830
BanII GRGCYC 2 cut(s) 751, 1040
Bbv12I GWGCWC 5 cut(s) 751, 1040, 1452, 1724, 1987
BbvI GCAGC 1 cut(s) 1011
BccI CCATC 2 cut(s) 775, 883
BceAI ACGGC 1 cut(s) 982
BcgI CGANNNNNNTGC 2 cut(s) 1694, 1728
BciT130I CCWGG 2 cut(s) 530, 828
BclI TGATCA 1 cut(s) 1906
BcnI CCSGG 1 cut(s) 123
BcoDI GTCTC 3 cut(s) 220, 1806, 1890
BfaI CTAG 6 cut(s) 971, 1236, 1251, 1784, 1920, 1988
BfrI CTTAAG 2 cut(s) 310, 1391
BfuAI ACCTGC 1 cut(s) 1986
BisI GCNGC 2 cut(s) 1025, 1852
BlsI GCNGC 2 cut(s) 1026, 1853
BmcAI AGTACT 1 cut(s) 1754
Bme1390I CCNGG 3 cut(s) 123, 530, 828
Bme18I GGWCC 1 cut(s) 566
BmeT110I CYCGRG 1 cut(s) 1454
BmgT120I GGNCC 1 cut(s) 566
BmiI GGNNCC 4 cut(s) 567, 832, 849, 1582
BmrFI CCNGG 3 cut(s) 123, 530, 828
BmsI GCATC 3 cut(s) 206, 943, 1646
BmtI GCTAGC 1 cut(s) 1923
BplI GAGNNNNNCTC 2 cut(s) 1491, 1523
BpmI CTGGAG 2 cut(s) 114, 228
Bpu14I TTCGAA 3 cut(s) 431, 554, 578
BpuEI CTTGAG 1 cut(s) 1613
BpuMI CCSGG 1 cut(s) 123
BsaBI GATNNNNATC 1 cut(s) 1523
BsaI GGTCTC 1 cut(s) 1890
BsaJI CCNNGG 3 cut(s) 121, 390, 528
BsaWI WCCGGW 1 cut(s) 568
Bsc4I CCNNNNNNNGG 4 cut(s) 126, 533, 1074, 1459
Bse118I RCCGGY 1 cut(s) 1459
Bse1I ACTGG 5 cut(s) 97, 245, 1760, 1798, 1976
Bse21I CCTNAGG 1 cut(s) 1473
Bse3DI GCAATG 1 cut(s) 336
Bse8I GATNNNNATC 1 cut(s) 1523
BseBI CCWGG 2 cut(s) 530, 828
BseDI CCNNGG 3 cut(s) 121, 390, 528
BseGI GGATG 5 cut(s) 386, 492, 723, 824, 1326
BseJI GATNNNNATC 1 cut(s) 1523
BseLI CCNNNNNNNGG 4 cut(s) 126, 533, 1074, 1459
BseMI GCAATG 1 cut(s) 336
BseMII CTCAG 3 cut(s) 1025, 1464, 1709
BseNI ACTGG 5 cut(s) 97, 245, 1760, 1798, 1976
BseRI GAGGAG 1 cut(s) 1826
BseXI GCAGC 1 cut(s) 1011
BsgI GTGCAG 2 cut(s) 673, 995
Bsh1236I CGCG 1 cut(s) 630
BshFI GGCC 1 cut(s) 969
BshNI GGYRCC 1 cut(s) 830
BsiHKAI GWGCWC 5 cut(s) 751, 1040, 1452, 1724, 1987
BsiHKCI CYCGRG 1 cut(s) 1454
BsiSI CCGG 3 cut(s) 123, 569, 1460
BslFI GGGAC 2 cut(s) 608, 1616
BslI CCNNNNNNNGG 4 cut(s) 126, 533, 1074, 1459
BsmAI GTCTC 3 cut(s) 220, 1806, 1890
BsmFI GGGAC 2 cut(s) 608, 1616
BsnI GGCC 1 cut(s) 969
Bso31I GGTCTC 1 cut(s) 1890
BsoBI CYCGRG 1 cut(s) 1454
Bsp119I TTCGAA 3 cut(s) 431, 554, 578
Bsp1286I GDGCHC 5 cut(s) 751, 1040, 1452, 1724, 1987
Bsp1407I TGTACA 1 cut(s) 28
BspACI CCGC 3 cut(s) 341, 416, 1852
BspANI GGCC 1 cut(s) 969
BspCNI CTCAG 3 cut(s) 1026, 1465, 1710
BspFNI CGCG 1 cut(s) 630
BspHI TCATGA 1 cut(s) 1953
BspLI GGNNCC 4 cut(s) 567, 832, 849, 1582
BspMI ACCTGC 1 cut(s) 1986
BspOI GCTAGC 1 cut(s) 1923
BspPI GGATC 5 cut(s) 106, 218, 1621, 1788, 1968
BspQI GCTCTTC 1 cut(s) 1614
BspT104I TTCGAA 3 cut(s) 431, 554, 578
BspT107I GGYRCC 1 cut(s) 830
BspTI CTTAAG 2 cut(s) 310, 1391
BspTNI GGTCTC 1 cut(s) 1890
BsrDI GCAATG 1 cut(s) 336
BsrFI RCCGGY 1 cut(s) 1459
BsrGI TGTACA 1 cut(s) 28
BsrI ACTGG 5 cut(s) 97, 245, 1760, 1798, 1976
BssAI RCCGGY 1 cut(s) 1459
BssECI CCNNGG 3 cut(s) 121, 390, 528
BssNAI GTATAC 1 cut(s) 371
BssT1I CCWWGG 1 cut(s) 390
Bst1107I GTATAC 1 cut(s) 371
Bst2UI CCWGG 2 cut(s) 530, 828
Bst4CI ACNGT 2 cut(s) 1481, 1540
Bst6I CTCTTC 3 cut(s) 39, 1614, 1730
BstAFI CTTAAG 2 cut(s) 310, 1391
BstAUI TGTACA 1 cut(s) 28
BstBI TTCGAA 3 cut(s) 431, 554, 578
BstC8I GCNNGC 4 cut(s) 685, 1115, 1856, 1921
BstDEI CTNAG 5 cut(s) 459, 1034, 1213, 1473, 1718
BstEII GGTNACC 1 cut(s) 403
BstF5I GGATG 5 cut(s) 386, 492, 723, 824, 1326
BstFNI CGCG 1 cut(s) 630
BstHHI GCGC 2 cut(s) 958, 1371
BstMAI GTCTC 3 cut(s) 220, 1806, 1890
BstMWI GCNNNNNNNGC 2 cut(s) 464, 1456
BstNI CCWGG 2 cut(s) 530, 828
BstNSI RCATGY 2 cut(s) 190, 691
BstPI GGTNACC 1 cut(s) 403
BstSCI CCNGG 3 cut(s) 121, 528, 826
BstUI CGCG 1 cut(s) 630
BstV1I GCAGC 1 cut(s) 1011
BstX2I RGATCY 1 cut(s) 1780
BstYI RGATCY 1 cut(s) 1780
BstZ17I GTATAC 1 cut(s) 371
Bsu36I CCTNAGG 1 cut(s) 1473
BsuRI GGCC 1 cut(s) 969
BtsCI GGATG 5 cut(s) 386, 492, 723, 824, 1326
BtsIMutI CAGTG 1 cut(s) 1715
BveI ACCTGC 1 cut(s) 1986
Cac8I GCNNGC 4 cut(s) 685, 1115, 1856, 1921
CaiI CAGNNNCTG 1 cut(s) 1804
CciI TCATGA 1 cut(s) 1953
CfoI GCGC 2 cut(s) 958, 1371
Cfr10I RCCGGY 1 cut(s) 1459
Cfr13I GGNCC 1 cut(s) 566
CsiI ACCWGGT 1 cut(s) 826
Csp6I GTAC 6 cut(s) 29, 740, 757, 1065, 1541, 1753
CviAII CATG 6 cut(s) 187, 688, 737, 1074, 1532, 1954
CviQI GTAC 6 cut(s) 29, 740, 757, 1065, 1541, 1753
DdeI CTNAG 5 cut(s) 459, 1034, 1213, 1473, 1718
Eam1104I CTCTTC 3 cut(s) 39, 1614, 1730
EarI CTCTTC 3 cut(s) 39, 1614, 1730
Ecl136II GAGCTC 2 cut(s) 749, 1038
Eco130I CCWWGG 1 cut(s) 390
Eco24I GRGCYC 2 cut(s) 751, 1040
Eco31I GGTCTC 1 cut(s) 1890
Eco47I GGWCC 1 cut(s) 566
Eco53kI GAGCTC 2 cut(s) 749, 1038
Eco57I CTGAAG 2 cut(s) 33, 1329
Eco81I CCTNAGG 1 cut(s) 1473
Eco88I CYCGRG 1 cut(s) 1454
Eco91I GGTNACC 1 cut(s) 403
EcoICRI GAGCTC 2 cut(s) 749, 1038
EcoO65I GGTNACC 1 cut(s) 403
EcoRII CCWGG 2 cut(s) 528, 826
EcoT14I CCWWGG 1 cut(s) 390
EcoT22I ATGCAT 1 cut(s) 1075
EcoT38I GRGCYC 2 cut(s) 751, 1040
ErhI CCWWGG 1 cut(s) 390
FaeI CATG 6 cut(s) 190, 691, 740, 1077, 1535, 1957
FaqI GGGAC 2 cut(s) 608, 1616
FatI CATG 6 cut(s) 186, 687, 736, 1073, 1531, 1953
FbaI TGATCA 1 cut(s) 1906
FblI GTMKAC 2 cut(s) 370, 980
Fnu4HI GCNGC 2 cut(s) 1025, 1852
FokI GGATG 5 cut(s) 373, 479, 710, 831, 1313
FriOI GRGCYC 2 cut(s) 751, 1040
Fsp4HI GCNGC 2 cut(s) 1025, 1852
FspBI CTAG 6 cut(s) 971, 1236, 1251, 1784, 1920, 1988
GlaI GCGC 2 cut(s) 957, 1370
GluI GCNGC 2 cut(s) 1025, 1852
GsuI CTGGAG 2 cut(s) 114, 228
HaeIII GGCC 1 cut(s) 969
HapII CCGG 3 cut(s) 123, 569, 1460
HhaI GCGC 2 cut(s) 958, 1371
Hin1II CATG 6 cut(s) 190, 691, 740, 1077, 1535, 1957
Hin6I GCGC 2 cut(s) 956, 1369
HinP1I GCGC 2 cut(s) 956, 1369
HincII GTYRAC 2 cut(s) 824, 981
HindII GTYRAC 2 cut(s) 824, 981
HinfI GANTC 1 cut(s) 107
HpaII CCGG 3 cut(s) 123, 569, 1460
HphI GGTGA 3 cut(s) 415, 1759, 1965
Hpy166II GTNNAC 6 cut(s) 371, 643, 693, 824, 981, 1465
Hpy188III TCNNGA 7 cut(s) 496, 1003, 1236, 1472, 1493, 1592, 1954
Hpy8I GTNNAC 6 cut(s) 371, 643, 693, 824, 981, 1465
Hpy99I CGWCG 1 cut(s) 1851
HpyAV CCTTC 7 cut(s) 68, 179, 286, 556, 1353, 1771, 1980
HpyCH4III ACNGT 2 cut(s) 1481, 1540
HpyCH4IV ACGT 2 cut(s) 661, 808
HpyF10VI GCNNNNNNNGC 2 cut(s) 464, 1456
HpyF3I CTNAG 5 cut(s) 459, 1034, 1213, 1473, 1718
HpySE526I ACGT 2 cut(s) 661, 808
Hsp92II CATG 6 cut(s) 190, 691, 740, 1077, 1535, 1957
HspAI GCGC 2 cut(s) 956, 1369
Ksp22I TGATCA 1 cut(s) 1906
LguI GCTCTTC 1 cut(s) 1614
LmnI GCTCC 3 cut(s) 427, 618, 746
Lsp1109I GCAGC 1 cut(s) 1011
LweI GCATC 3 cut(s) 206, 943, 1646
MabI ACCWGGT 1 cut(s) 826
MaeI CTAG 6 cut(s) 971, 1236, 1251, 1784, 1920, 1988
MaeII ACGT 2 cut(s) 661, 808
MaeIII GTNAC 5 cut(s) 64, 315, 403, 809, 1693
MfeI CAATTG 1 cut(s) 1630
MflI RGATCY 1 cut(s) 1780
MhlI GDGCHC 5 cut(s) 751, 1040, 1452, 1724, 1987
MluI ACGCGT 1 cut(s) 628
MmeI TCCRAC 1 cut(s) 1788
Mph1103I ATGCAT 1 cut(s) 1075
MroXI GAANNNNTTC 2 cut(s) 1010, 1623
MseI TTAA 8 cut(s) 138, 311, 375, 675, 933, 1392, 1686, 1749
MslI CAYNNNNRTG 1 cut(s) 350
MspCI CTTAAG 2 cut(s) 310, 1391
MspI CCGG 3 cut(s) 123, 569, 1460
MspR9I CCNGG 3 cut(s) 123, 530, 828
MunI CAATTG 1 cut(s) 1630
MvaI CCWGG 2 cut(s) 530, 828
MvnI CGCG 1 cut(s) 630
MwoI GCNNNNNNNGC 2 cut(s) 464, 1456
NciI CCSGG 1 cut(s) 123
NheI GCTAGC 1 cut(s) 1919
NlaIII CATG 6 cut(s) 190, 691, 740, 1077, 1535, 1957
NlaIV GGNNCC 4 cut(s) 567, 832, 849, 1582
NmuCI GTSAC 3 cut(s) 403, 809, 1693
NsiI ATGCAT 1 cut(s) 1075
NspI RCATGY 2 cut(s) 190, 691
NspV TTCGAA 3 cut(s) 431, 554, 578
PaeR7I CTCGAG 1 cut(s) 1454
PagI TCATGA 1 cut(s) 1953
PciI ACATGT 1 cut(s) 186
PciSI GCTCTTC 1 cut(s) 1614
PdmI GAANNNNTTC 2 cut(s) 1010, 1623
PfeI GAWTC 1 cut(s) 107
PkrI GCNGC 2 cut(s) 1026, 1853
PscI ACATGT 1 cut(s) 186
Psp124BI GAGCTC 2 cut(s) 751, 1040
Psp6I CCWGG 2 cut(s) 528, 826
PspEI GGTNACC 1 cut(s) 403
PspGI CCWGG 2 cut(s) 528, 826
PspN4I GGNNCC 4 cut(s) 567, 832, 849, 1582
PspPI GGNCC 1 cut(s) 566
PspXI VCTCGAGB 1 cut(s) 1454
PstNI CAGNNNCTG 1 cut(s) 1804
PsuI RGATCY 1 cut(s) 1780
RsaI GTAC 6 cut(s) 30, 741, 758, 1066, 1542, 1754
RsaNI GTAC 6 cut(s) 29, 740, 757, 1065, 1541, 1753
RseI CAYNNNNRTG 1 cut(s) 350
SacI GAGCTC 2 cut(s) 751, 1040
SalI GTCGAC 1 cut(s) 979
SapI GCTCTTC 1 cut(s) 1614
SaqAI TTAA 8 cut(s) 138, 311, 375, 675, 933, 1392, 1686, 1749
SatI GCNGC 2 cut(s) 1025, 1852
Sau96I GGNCC 1 cut(s) 566
ScaI AGTACT 1 cut(s) 1754
ScrFI CCNGG 3 cut(s) 123, 530, 828
SduI GDGCHC 5 cut(s) 751, 1040, 1452, 1724, 1987
SexAI ACCWGGT 1 cut(s) 826
SfaNI GCATC 3 cut(s) 206, 943, 1646
Sfr274I CTCGAG 1 cut(s) 1454
SfuI TTCGAA 3 cut(s) 431, 554, 578
SinI GGWCC 1 cut(s) 566
SlaI CTCGAG 1 cut(s) 1454
SmiMI CAYNNNNRTG 1 cut(s) 350
SmlI CTYRAG 4 cut(s) 310, 1391, 1454, 1592
SmoI CTYRAG 4 cut(s) 310, 1391, 1454, 1592
SsiI CCGC 3 cut(s) 341, 416, 1852
SspI AATATT 1 cut(s) 147
SspMI CTAG 6 cut(s) 971, 1236, 1251, 1784, 1920, 1988
SstI GAGCTC 2 cut(s) 751, 1040
StyD4I CCNGG 3 cut(s) 121, 528, 826
StyI CCWWGG 1 cut(s) 390
TaaI ACNGT 2 cut(s) 1481, 1540
TaiI ACGT 2 cut(s) 664, 811
TaqI TCGA 9 cut(s) 110, 431, 554, 578, 597, 980, 1455, 1704, 1794
TatI WGTACW 4 cut(s) 28, 739, 1540, 1752
TauI GCSGC 1 cut(s) 1854
TfiI GAWTC 1 cut(s) 107
Tru1I TTAA 8 cut(s) 138, 311, 375, 675, 933, 1392, 1686, 1749
Tru9I TTAA 8 cut(s) 138, 311, 375, 675, 933, 1392, 1686, 1749
TscAI CASTG 1 cut(s) 1722
TseFI GTSAC 3 cut(s) 403, 809, 1693
TseI GCWGC 1 cut(s) 1024
Tsp45I GTSAC 3 cut(s) 403, 809, 1693
TspDTI ATGAA 6 cut(s) 87, 575, 932, 1214, 1270, 1513
TspGWI ACGGA 2 cut(s) 53, 1207
TspRI CASTG 1 cut(s) 1722
Vha464I CTTAAG 2 cut(s) 310, 1391
VpaK11BI GGWCC 1 cut(s) 566
XapI RAATTY 5 cut(s) 357, 998, 1141, 1762, 1842
XbaI TCTAGA 1 cut(s) 1235
XceI RCATGY 2 cut(s) 190, 691
XcmI CCANNNNNNNNNTGG 1 cut(s) 529
XhoI CTCGAG 1 cut(s) 1454
XmiI GTMKAC 2 cut(s) 370, 980
XmnI GAANNNNTTC 2 cut(s) 1010, 1623
XspI CTAG 6 cut(s) 971, 1236, 1251, 1784, 1920, 1988
ZrmI AGTACT 1 cut(s) 1754
Zsp2I ATGCAT 1 cut(s) 1075
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.