RLG00000003261

Cyclic nucleotide-gated ion channel 1-like

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
Physical Location & Seq
Forward (+)
46266980 .. 46271331
4352 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000003261

Sequence Viewer

Length: 1908 bp
ATGAATCTGAGAGTTGTCAAAACTATTTTGGAACATTGGGTTGATCAAGGACCTGCCAGAGAAAAAGGATATGAGGAAAGGAATCATAGGATAAAGGAAATCCTTGACCCGCAGGGATCATTCCTACCAATGTGGAATAGGATATTTGCACTGTTCTGTGTGTTTGCTGTGTTACTAGATCCTTTGTTCTTTTACATTCCTATCATTCATGCTGATCTGAAGTGCCTCGGATTTGATACAAGAATGAAGAAAATAGCTCTTGTTTCAAGATCCGTCACAGATTTCTTTTACATGGTGGATATTATACTTCAAATTTGCACTCGACTTTATGCTGGAAGATATAAGGCTTCCTGGATATCAACATTGGACCTGGTAATTGTACCTACCAATGGTAAAGAATCGGCTGCGGAAGCTTTATCATTCGCTAAGAGGAACTCGCTGTTCTACATTCTTATAGACATCATTGCTCTTCTTCCCCTCCCACAGGCGGTGATTTTCATTTTCTTTCCAAAACTAATCAGGAGCTCAGAATCTATGATTACAAGGATAATTCTGAACTGTTGTGTTTTATTACAATATGTTCCACGTATTCTTCGCATCTACCTACCGGGTGATGTCCTTACCATAGATGCTAGAAGTGGAATATGGATTAAAGGTGTATTCGACTTTTTTCCTTTCATCCTTGCTGGTCATGTATTTGGGGCTATGTGGTACTTTTTTGCTGTTCAACGAGAAGCAACTTGTTGGGAAAAAGCTTGTCAAAGTAAAAATGGATGTCAACCTATAAGTTTTGATTGTGATAGCAATGAGTTCAGAAATATTACACTTTTGAACGACTTATGCCCTATAAATCCACAAAATGCTACGCTCTTTGATTTCGGTATATTTCTTGATGCTATTCAGTCTGGTATGTTGGAGTCAACCGACTTCCCACAAAAATTGTTCCAGTGCTTTTGGTGGGGTTTACGAAATTTGAGAATTTCAGTTTGCATTGCCAAGATGATATGTATAGTTGACATTATACATAGCTTGATAATAATTAAATCTAATACATATGTACAGCTGGAAGCAAAAAGATTAGAGCTGCTTAAACTGAAAAAGAAGATGCAAAAGATAAATCCTGAGATAGATTTGTGGTTACATAAGAACGGCCTCTCTAATGATGAAAAGGGAAATCAGAGTCTAAATCATCTGAAAAAGCTGATCATGAAAAACGTACAGCAAAACCTTGAAGAAAACAAACATGTTGAGGTGGAGAATATCCTTTCTATTCTTCCCTTCAGCAACAGAATGTATATCATGCGGCATCTCCGTTTGAATTCGTTAAAGAAAGTGTCAATGTTTAAAGATATTGACGAGGGTGCATTAAAAGTAATTTCTCAATACCTTAAGCGAGTAATCTATGCTCCGGACACCTATATTATTCGAGAAGGAGAACCACTTGACAAGATGCTCTTCATCACACAAGGCACGGTATGGACCTACATAACAAGTAATGGACGTTATGGTCCCTCGAATACCACGTCCCTTGGCAAAGGTGATGTTTATGGAGCAAAACTTCTATTAGATTGGGCATTCAAAGATGAGTTCTCCCTTCCTGAGTTACCCATTTCACCTGCTATTGTCAAGTCCCAAACGAAAGTGGAAGGATTTATCATCAGGGCCAACGACTTGAAGTATGTTGTGTCTAAACCACAAATTTGGTGGCATTTTAAAGAGATGCTGATCCCTTCTTCTGAGTTGGAGGTGGTGTGTCGTCTCAAGGCAACTAGTTGCTTACAAGCAGCTTGGCGCCAATACCAATCAAGGGTTAGGGGGAAAAGGCTAGCGGATGGGAAAATTTCTTTGGACCATATAGTCACTTGTCAAAACAGAGAGTTGAATTCTGTTCTTGCCCCTTGTTGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

636

Amino Acids

73.19

Weight (kDa)

9.05

Isoelectric Point (pI)

37.59

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000017)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07351 FvH4_1g11800 FvH4_1g11800 FvH4_1g11800 FvH4_1g11800 FvH4_1g11800 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_4g14360 FvH4_6g13561 FvH4_6g13562 FvH4_6g13580 FvH4_6g13590 FvH4_6g13590 FvH4_6g13590 FvH4_6g13731 FvH4_6g13770 FvH4_6g13800 FvH4_6g13800 FvH4_6g13860 FvH4_6g13870 FvH4_6g13870 FvH4_6g13870 FvH4_6g13870 FvH4_6g13870 FvH4_6g13890 FvH4_6g33801 FvH4_7g13020 FvH4_7g13270 FvH4_7g13270 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g14580 FvH4_7g14580 FvH4_7g14580 FvH4_7g14600 FvH4_7g14600 FvH4_7g20030 FvH4_7g20510 FvH4_7g20510 FvH4_7g20510 FvH4_7g20670 FvH4_7g20670 FvH4_7g20670 FvH4_7g20670 FvH4_7g20690 FvH4_7g20690 FvH4_7g31930 FvH4_7g31930 FvH4_7g31940 FvH4_7g31940
malus_domestica MD01G1115700.v1.1 MD01G1115800.v1.1 MD01G1116600.v1.1 MD01G1116700.v1.1 MD01G1117000.v1.1 MD01G1225000.v1.1 MD02G1077900.v1.1 MD02G1078000.v1.1 MD02G1078200.v1.1 MD02G1078400.v1.1 MD02G1084300.v1.1 MD04G1004700.v1.1 MD04G1123100.v1.1 MD04G1123200.v1.1 MD04G1128000.v1.1 MD04G1128400.v1.1 MD05G1299700.v1.1 MD05G1300000.v1.1 MD07G1184000.v1.1 MD07G1292300.v1.1 MD08G1214800.v1.1
prunus_persica Prupe.1G205100_v2.0.a1 Prupe.1G205100_v2.0.a1 Prupe.1G205200_v2.0.a1 Prupe.2G222300_v2.0.a1 Prupe.2G223300_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223600_v2.0.a1 Prupe.2G223600_v2.0.a1 Prupe.2G223600_v2.0.a1 Prupe.2G223700_v2.0.a1 Prupe.2G223700_v2.0.a1 Prupe.2G223700_v2.0.a1 Prupe.2G223700_v2.0.a1 Prupe.2G223800_v2.0.a1 Prupe.2G223900_v2.0.a1 Prupe.2G224000_v2.0.a1 Prupe.5G162000_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G291000_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G210400_v2.0.a1 Prupe.7G210600_v2.0.a1 Prupe.7G210700_v2.0.a1 Prupe.7G210800_v2.0.a1 Prupe.7G210900_v2.0.a1 Prupe.8G097600_v2.0.a1 Prupe.8G097800_v2.0.a1 Prupe.8G097800_v2.0.a1
pyrus_communis pycom01g14430 pycom01g14440 pycom01g23130 pycom01g23160 pycom01g23330 pycom02g06210 pycom02g06220 pycom02g06250 pycom02g06270 pycom02g06710 pycom03g05360 pycom03g05380 pycom04g11470 pycom04g11480 pycom04g11520 pycom04g11560 pycom04g11600 pycom04g11610 pycom04g11650 pycom04g11660 pycom04g11670 pycom05g27790 pycom07g17630 pycom08g20960 pycom126g00020 pycom126g00030
rosa_chinensis RchiOBHm_Chr1g0318251 RchiOBHm_Chr1g0318731 RchiOBHm_Chr1g0339101 RchiOBHm_Chr1g0339111 RchiOBHm_Chr1g0347151 RchiOBHm_Chr1g0347161 RchiOBHm_Chr1g0347221 RchiOBHm_Chr1g0352401 RchiOBHm_Chr1g0352441 RchiOBHm_Chr1g0352461 RchiOBHm_Chr1g0356131 RchiOBHm_Chr1g0363991 RchiOBHm_Chr1g0364791 RchiOBHm_Chr1g0364801 RchiOBHm_Chr1g0364811 RchiOBHm_Chr1g0364851 RchiOBHm_Chr1g0364951 RchiOBHm_Chr1g0370821 RchiOBHm_Chr1g0381221 RchiOBHm_Chr1g0381231 RchiOBHm_Chr1g0381261 RchiOBHm_Chr1g0381271 RchiOBHm_Chr1g0381341 RchiOBHm_Chr1g0381351 RchiOBHm_Chr1g0381391 RchiOBHm_Chr1g0381801 RchiOBHm_Chr1g0381821 RchiOBHm_Chr2g0093241 RchiOBHm_Chr2g0116391 RchiOBHm_Chr3g0466441 RchiOBHm_Chr3g0466631 RchiOBHm_Chr3g0466651 RchiOBHm_Chr3g0496921 RchiOBHm_Chr4g0400441 RchiOBHm_Chr4g0400501 RchiOBHm_Chr4g0400511 RchiOBHm_Chr4g0400691 RchiOBHm_Chr4g0400701 RchiOBHm_Chr4g0404331 RchiOBHm_Chr5g0052101 RchiOBHm_Chr5g0052111 RchiOBHm_Chr5g0052171 RchiOBHm_Chr5g0052181 RchiOBHm_Chr6g0264161 RchiOBHm_Chr6g0265551 RchiOBHm_Chr7g0213571 RchiOBHm_Chr7g0213581
rosa_laevigata RLG00000002796 RLG00000003261 RLG00000007935 RLG00000007936 RLG00000009187 RLG00000014179 RLG00000016381 RLG00000018265 RLG00000024558 RLG00000024574 RLG00000026232 RLG00000026234 RLG00000026236 RLG00000026237 RLG00000027459 RLG00000027461 RLG00000027463 RLG00000027530 RLG00000028103 RLG00000028304 RLG00000028333 RLG00000029214 RLG00000029848 RLG00000029951 RLG00000030115 RLG00000030552 RLG00000033668 RLG00000034840 RLG00000034841 RLG00000034842 RLG00000035830
rosa_multiflora Rmu_sc0000654.1_g000004 Rmu_sc0000675.1_g000025 Rmu_sc0001075.1_g000002 Rmu_sc0001726.1_g000004 Rmu_sc0001772.1_g000061 Rmu_sc0001772.1_g000065 Rmu_sc0002067.1_g000002 Rmu_sc0002183.1_g000001 Rmu_sc0002183.1_g000006 Rmu_sc0002244.1_g000003 Rmu_sc0002313.1_g000004 Rmu_sc0002319.1_g000004 Rmu_sc0002539.1_g000085 Rmu_sc0002636.1_g000004 Rmu_sc0003229.1_g000007 Rmu_sc0003313.1_g000020 Rmu_sc0003546.1_g000007 Rmu_sc0003724.1_g000015 Rmu_sc0003936.1_g000029 Rmu_sc0004191.1_g000067 Rmu_sc0004525.1_g000012 Rmu_sc0005122.1_g000009 Rmu_sc0005255.1_g000040 Rmu_sc0005338.1_g000016 Rmu_sc0005584.1_g000008 Rmu_sc0006460.1_g000013 Rmu_sc0006872.1_g000011 Rmu_sc0006872.1_g000015 Rmu_sc0006872.1_g000016 Rmu_sc0006952.1_g000013 Rmu_sc0007342.1_g000005 Rmu_sc0007342.1_g000006 Rmu_sc0008418.1_g000003 Rmu_sc0008418.1_g000006 Rmu_sc0008636.1_g000007 Rmu_sc0008636.1_g000008 Rmu_sc0009205.1_g000014 Rmu_sc0009365.1_g000014 Rmu_sc0009917.1_g000002 Rmu_sc0019289.1_g000003 Rmu_ssc0000098.1_g000011 Rmu_ssc0000098.1_g000012 Rmu_ssc0000167.1_g000018 Rmu_ssc0000167.1_g000024 Rmu_ssc0000326.1_g000015
rosa_roxburghii Rroxscaffold_166G00440780 Rroxscaffold_176G00431500 Rroxscaffold_1G00015080 Rroxscaffold_1G00027880 Rroxscaffold_1G00027890 Rroxscaffold_1G00027920 Rroxscaffold_2G00127250 Rroxscaffold_2G00148380 Rroxscaffold_3G00219450 Rroxscaffold_3G00232170 Rroxscaffold_3G00232210 Rroxscaffold_3G00242230 Rroxscaffold_3G00242240 Rroxscaffold_3G00244790 Rroxscaffold_3G00245790 Rroxscaffold_4G00278400 Rroxscaffold_4G00278430 Rroxscaffold_4G00278670 Rroxscaffold_4G00278680 Rroxscaffold_4G00278690 Rroxscaffold_4G00278700 Rroxscaffold_4G00278720 Rroxscaffold_4G00291690 Rroxscaffold_4G00292070 Rroxscaffold_4G00292090 Rroxscaffold_4G00292770 Rroxscaffold_4G00302240 Rroxscaffold_4G00302860 Rroxscaffold_4G00311320 Rroxscaffold_4G00311330 Rroxscaffold_4G00320570 Rroxscaffold_4G00322050 Rroxscaffold_4G00329480 Rroxscaffold_4G00329730 Rroxscaffold_5G00345500 Rroxscaffold_5G00345510 Rroxscaffold_5G00360830 Rroxscaffold_5G00360840 Rroxscaffold_6G00393450 Rroxscaffold_6G00404030 Rroxscaffold_6G00414220 Rroxscaffold_6G00414230 Rroxscaffold_6G00414280 Rroxscaffold_6G00414290 Rroxscaffold_6G00414350 Rroxscaffold_6G00414470 Rroxscaffold_7G00202570 Rroxscaffold_7G00203460 Rroxscaffold_7G00203470
rosa_rugosa Rorug01G0020500 Rorug01G0020600 Rorug01G0020700 Rorug01G0143700.1 Rorug01G0225700 Rorug01G0228500 Rorug01G0228600 Rorug01G0228600 Rorug01G0228700 Rorug01G0228800 Rorug01G0228800 Rorug01G0229000 Rorug01G0229300 Rorug01G0229400 Rorug01G0229600 Rorug01G0229700 Rorug01G0232200 Rorug01G0232600 Rorug01G0232600 Rorug01G0311900 Rorug01G0311900 Rorug01G0318400 Rorug01G0318500 Rorug01G0318500 Rorug01G0318500 Rorug01G0427900 Rorug01G0427900 Rorug01G0428000 Rorug01G0428200 Rorug01G0428300 Rorug01G0428400 Rorug01G0431500 Rorug01G0431600 Rorug01G0431600 Rorug02G0033800 Rorug02G0206300 Rorug03G0081900 Rorug03G0083200 Rorug03G0083200 Rorug03G0083300 Rorug04G0025100 Rorug04G0025100 Rorug04G0025200 Rorug04G0025300 Rorug04G0058600 Rorug04G0058700 Rorug04G0058800 Rorug04G0098400 Rorug04G0098500 Rorug05G0274500 Rorug05G0274600 Rorug05G0274800 Rorug06G0008500 Rorug06G0009100 Rorug06G0018000
rosa_samantha Rh1AG031700 Rh1AG036100 Rh1AG089800 Rh1AG239800 Rh1AG239900 Rh1AG242000 Rh1AG242300 Rh1AG245600 Rh1AG262600 Rh1AG319700 Rh1AG319800 Rh1AG319900 Rh1AG327200 Rh1AG451100 Rh1AG451200 Rh1AG451300 Rh1AG451600 Rh1AG451700 Rh1BG027200 Rh1BG071600 Rh1BG090700 Rh1BG211000 Rh1BG213000 Rh1BG213500 Rh1BG282800 Rh1BG288400 Rh1BG408100 Rh1BG408200 Rh1BG408400 Rh1BG408700 Rh1CG026300 Rh1CG028300 Rh1CG224100 Rh1CG226000 Rh1CG226100 Rh1CG229300 Rh1CG229400 Rh1CG245900 Rh1CG299200 Rh1CG299400 Rh1CG299500 Rh1CG303300 Rh1CG305100 Rh1CG422500 Rh1CG422600 Rh1CG422700 Rh1CG422800 Rh1CG422900 Rh1CG423100 Rh1CG423300 Rh1CG423400 Rh1CG426300 Rh1CG426600 Rh1DG239300 Rh1DG239600 Rh1DG258300 Rh1DG314200 Rh1DG314300 Rh1DG314400 Rh1DG320000 Rh1DG439200 Rh1DG439400 Rh1DG439500 Rh1DG439700 Rh1DG440000 Rh1DG443800 Rh2AG261800 Rh2BG080900 Rh2CG083300 Rh2DG078900 Rh2DG270000 Rh2DG270100 Rh3AG128400 Rh3AG130100 Rh3AG130500 Rh3AG332500 Rh3AG332600 Rh3AG332800 Rh3BG149700 Rh3BG151500 Rh3CG151400 Rh3CG354500 Rh3CG366800 Rh3DG150500 Rh3DG152200 Rh4AG101400 Rh4AG102900 Rh4AG148300 Rh4AG148600 Rh4BG098000 Rh4CG111100 Rh4CG111300 Rh4CG155100 Rh4DG094800 Rh5AG213600 Rh5AG346900 Rh5AG347000 Rh5BG357500 Rh5BG357700 Rh5BG485400 Rh5CG383100 Rh5CG383200 Rh5CG383300 Rh5CG509900 Rh5DG373000 Rh5DG373200 Rh6BG054300 Rh6BG126300 Rh6CG125100 Rh6CG185300 Rh6DG177000 Rh7AG276100 Rh7AG276200 Rh7BG230500 Rh7BG270500 Rh7BG364000 Rh7CG250100 Rh7CG295200 Rh7CG295300 Rh7DG389700
rosa_wichuraiana Rw0G001190 Rw0G010680 Rw0G013360 Rw0G014310 Rw0G014890 Rw0G020310 Rw0G021350 Rw0G022510 Rw1G003360 Rw1G004330 Rw1G006930 Rw1G008310 Rw1G021090 Rw1G021150 Rw1G021210 Rw1G023200 Rw1G023210 Rw1G028340 Rw1G028350 Rw1G028990 Rw1G032510 Rw1G039370 Rw1G039400 Rw1G039410 Rw1G039420 Rw1G039430 Rw2G006700 Rw2G020550 Rw2G020580 Rw3G012130 Rw3G012300 Rw3G012310 Rw3G028220 Rw3G029230 Rw5G021600 Rw5G032790 Rw6G011240 Rw7G027670 Rw7G032780

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1624
AasI GACNNNNNNGTC 2 cut(s) 1506, 1856
Acc36I ACCTGC 2 cut(s) 61, 1624
AccB1I GGYRCC 1 cut(s) 1791
AccIII TCCGGA 1 cut(s) 1408
AciI CCGC 5 cut(s) 110, 407, 488, 1303, 1829
AclWI GGATC 4 cut(s) 124, 173, 264, 1720
AcsI RAATTY 7 cut(s) 312, 970, 978, 1318, 1698, 1839, 1882
AcuI CTGAAG 2 cut(s) 239, 1264
AcyI GRCGYC 1 cut(s) 1792
AfaI GTAC 4 cut(s) 381, 713, 1059, 1218
AfiI CCNNNNNNNGG 4 cut(s) 389, 484, 487, 1807
AflII CTTAAG 1 cut(s) 1388
AflIII ACRYGT 1 cut(s) 1243
AgsI TTSAA 9 cut(s) 267, 311, 728, 832, 1232, 1318, 1579, 1675, 1882
AhlI ACTAGT 1 cut(s) 1769
AjiI CACGTC 1 cut(s) 1524
AjnI CCWGG 2 cut(s) 350, 369
AjuI GAANNNNNNNTTGG 2 cut(s) 1829, 1861
AluBI AGCT 9 cut(s) 257, 413, 525, 755, 1029, 1063, 1084, 1201, 1787
AluI AGCT 9 cut(s) 257, 413, 525, 755, 1029, 1063, 1084, 1201, 1787
Alw21I GWGCWC 1 cut(s) 527
Alw26I GTCTC 1 cut(s) 1763
AlwI GGATC 4 cut(s) 124, 173, 264, 1720
Aor13HI TCCGGA 1 cut(s) 1408
AoxI GGCC 2 cut(s) 1150, 1662
ApeKI GCWGC 3 cut(s) 404, 1084, 1784
ApoI RAATTY 7 cut(s) 312, 970, 978, 1318, 1698, 1839, 1882
ArsI GACNNNNNNTTYG 2 cut(s) 1508, 1540
AspLEI GCGC 1 cut(s) 1794
AspS9I GGNCC 6 cut(s) 50, 367, 1479, 1508, 1662, 1849
AsuC2I CCSGG 1 cut(s) 609
AsuHPI GGTGA 4 cut(s) 502, 623, 1550, 1605
AsuNHI GCTAGC 1 cut(s) 1825
AvaII GGWCC 5 cut(s) 50, 367, 1479, 1508, 1849
BanI GGYRCC 1 cut(s) 1791
BanII GRGCYC 1 cut(s) 527
Bbv12I GWGCWC 1 cut(s) 527
BbvI GCAGC 3 cut(s) 391, 1071, 1796
BccI CCATC 1 cut(s) 1826
BceAI ACGGC 1 cut(s) 1165
BciT130I CCWGG 2 cut(s) 352, 371
BclI TGATCA 2 cut(s) 43, 1203
BcnI CCSGG 1 cut(s) 609
BcoDI GTCTC 1 cut(s) 1763
BcuI ACTAGT 1 cut(s) 1769
BfaI CTAG 4 cut(s) 176, 633, 1770, 1826
BfoI RGCGCY 1 cut(s) 1795
BfrI CTTAAG 1 cut(s) 1388
BfuAI ACCTGC 2 cut(s) 61, 1624
BisI GCNGC 4 cut(s) 405, 1085, 1304, 1785
BlsI GCNGC 4 cut(s) 406, 1086, 1305, 1786
Bme1390I CCNGG 3 cut(s) 352, 371, 609
Bme18I GGWCC 5 cut(s) 50, 367, 1479, 1508, 1849
BmgBI CACGTC 1 cut(s) 1524
BmgT120I GGNCC 6 cut(s) 50, 367, 1479, 1508, 1662, 1849
BmiI GGNNCC 2 cut(s) 1510, 1793
BmrFI CCNGG 3 cut(s) 352, 371, 609
BmsI GCATC 7 cut(s) 606, 619, 883, 1095, 1315, 1440, 1710
BmtI GCTAGC 1 cut(s) 1829
BpuEI CTTGAG 1 cut(s) 1745
BpuMI CCSGG 1 cut(s) 609
BsaAI YACGTR 1 cut(s) 587
BsaBI GATNNNNATC 1 cut(s) 1724
BsaHI GRCGYC 1 cut(s) 1792
BsaJI CCNNGG 2 cut(s) 226, 1528
BsaWI WCCGGW 1 cut(s) 1408
BsaXI ACNNNNNCTCC 2 cut(s) 1736, 1766
Bsc4I CCNNNNNNNGG 4 cut(s) 389, 484, 487, 1807
Bse1I ACTGG 1 cut(s) 946
Bse3DI GCAATG 3 cut(s) 462, 811, 990
Bse8I GATNNNNATC 1 cut(s) 1724
BseAI TCCGGA 1 cut(s) 1408
BseBI CCWGG 2 cut(s) 352, 371
BseDI CCNNGG 2 cut(s) 226, 1528
BseGI GGATG 3 cut(s) 678, 779, 1837
BseJI GATNNNNATC 1 cut(s) 1724
BseLI CCNNNNNNNGG 4 cut(s) 389, 484, 487, 1807
BseMI GCAATG 3 cut(s) 462, 811, 990
BseMII CTCAG 4 cut(s) 540, 1113, 1590, 1728
BseNI ACTGG 1 cut(s) 946
BseXI GCAGC 3 cut(s) 391, 1071, 1796
BshFI GGCC 2 cut(s) 1152, 1664
BshNI GGYRCC 1 cut(s) 1791
BsiHKAI GWGCWC 1 cut(s) 527
BsiSI CCGG 2 cut(s) 608, 1409
BslFI GGGAC 3 cut(s) 1494, 1510, 1615
BslI CCNNNNNNNGG 4 cut(s) 389, 484, 487, 1807
BsmAI GTCTC 1 cut(s) 1763
BsmBI CGTCTC 1 cut(s) 1763
BsmFI GGGAC 3 cut(s) 1494, 1510, 1615
BsmI GAATGC 1 cut(s) 1574
BsnI GGCC 2 cut(s) 1152, 1664
Bsp1286I GDGCHC 1 cut(s) 527
Bsp13I TCCGGA 1 cut(s) 1408
Bsp1407I TGTACA 1 cut(s) 1057
Bsp143I GATC 7 cut(s) 43, 116, 178, 214, 269, 1203, 1725
BspACI CCGC 5 cut(s) 110, 407, 488, 1303, 1829
BspANI GGCC 2 cut(s) 1152, 1664
BspCNI CTCAG 4 cut(s) 539, 1114, 1591, 1729
BspEI TCCGGA 1 cut(s) 1408
BspHI TCATGA 1 cut(s) 1206
BspLI GGNNCC 2 cut(s) 1510, 1793
BspMI ACCTGC 2 cut(s) 61, 1624
BspOI GCTAGC 1 cut(s) 1829
BspPI GGATC 4 cut(s) 124, 173, 264, 1720
BspQI GCTCTTC 2 cut(s) 474, 1460
BspT107I GGYRCC 1 cut(s) 1791
BspTI CTTAAG 1 cut(s) 1388
BsrDI GCAATG 3 cut(s) 462, 811, 990
BsrGI TGTACA 1 cut(s) 1057
BsrI ACTGG 1 cut(s) 946
BssECI CCNNGG 2 cut(s) 226, 1528
BssMI GATC 7 cut(s) 43, 116, 178, 214, 269, 1203, 1725
BssNI GRCGYC 1 cut(s) 1792
BssT1I CCWWGG 1 cut(s) 1528
Bst2UI CCWGG 2 cut(s) 352, 371
Bst4CI ACNGT 3 cut(s) 153, 560, 1474
Bst6I CTCTTC 2 cut(s) 474, 1460
BstACI GRCGYC 1 cut(s) 1792
BstAFI CTTAAG 1 cut(s) 1388
BstAUI TGTACA 1 cut(s) 1057
BstBAI YACGTR 1 cut(s) 587
BstC8I GCNNGC 1 cut(s) 1827
BstDEI CTNAG 6 cut(s) 8, 426, 526, 1122, 1599, 1737
BstENI CCTNNNNNAGG 1 cut(s) 482
BstF5I GGATG 3 cut(s) 678, 779, 1837
BstH2I RGCGCY 1 cut(s) 1795
BstHHI GCGC 1 cut(s) 1794
BstKTI GATC 7 cut(s) 46, 119, 181, 217, 272, 1206, 1728
BstMAI GTCTC 1 cut(s) 1763
BstMBI GATC 7 cut(s) 43, 116, 178, 214, 269, 1203, 1725
BstMWI GCNNNNNNNGC 1 cut(s) 410
BstNI CCWGG 2 cut(s) 352, 371
BstNSI RCATGY 1 cut(s) 1247
BstSCI CCNGG 3 cut(s) 350, 369, 607
BstV1I GCAGC 3 cut(s) 391, 1071, 1796
BstX2I RGATCY 2 cut(s) 178, 269
BstXI CCANNNNNNTGG 1 cut(s) 1701
BstYI RGATCY 2 cut(s) 178, 269
BsuRI GGCC 2 cut(s) 1152, 1664
BtrI CACGTC 1 cut(s) 1524
BtsCI GGATG 3 cut(s) 678, 779, 1837
BtsIMutI CAGTG 2 cut(s) 149, 953
BveI ACCTGC 2 cut(s) 61, 1624
Cac8I GCNNGC 1 cut(s) 1827
CciI TCATGA 1 cut(s) 1206
CfoI GCGC 1 cut(s) 1794
Cfr13I GGNCC 6 cut(s) 50, 367, 1479, 1508, 1662, 1849
CsiI ACCWGGT 1 cut(s) 369
Csp6I GTAC 4 cut(s) 380, 712, 1058, 1217
CspCI CAANNNNNGTGG 6 cut(s) 921, 956, 1510, 1545, 1685, 1720
CviAII CATG 6 cut(s) 209, 292, 692, 1207, 1244, 1300
CviQI GTAC 4 cut(s) 380, 712, 1058, 1217
DdeI CTNAG 6 cut(s) 8, 426, 526, 1122, 1599, 1737
DinI GGCGCC 1 cut(s) 1793
DpnI GATC 7 cut(s) 45, 118, 180, 216, 271, 1205, 1727
DpnII GATC 7 cut(s) 43, 116, 178, 214, 269, 1203, 1725
DraI TTTAAA 2 cut(s) 1345, 1714
DrdI GACNNNNNNGTC 2 cut(s) 1506, 1856
DseDI GACNNNNNNGTC 2 cut(s) 1506, 1856
Eam1104I CTCTTC 2 cut(s) 474, 1460
EarI CTCTTC 2 cut(s) 474, 1460
Ecl136II GAGCTC 1 cut(s) 525
Eco130I CCWWGG 1 cut(s) 1528
Eco24I GRGCYC 1 cut(s) 527
Eco32I GATATC 1 cut(s) 357
Eco47I GGWCC 5 cut(s) 50, 367, 1479, 1508, 1849
Eco53kI GAGCTC 1 cut(s) 525
Eco57I CTGAAG 2 cut(s) 239, 1264
EcoICRI GAGCTC 1 cut(s) 525
EcoNI CCTNNNNNAGG 1 cut(s) 482
EcoO109I RGGNCCY 1 cut(s) 50
EcoRI GAATTC 2 cut(s) 1318, 1882
EcoRII CCWGG 2 cut(s) 350, 369
EcoRV GATATC 1 cut(s) 357
EcoT14I CCWWGG 1 cut(s) 1528
EcoT38I GRGCYC 1 cut(s) 527
EgeI GGCGCC 1 cut(s) 1793
EheI GGCGCC 1 cut(s) 1793
ErhI CCWWGG 1 cut(s) 1528
Esp3I CGTCTC 1 cut(s) 1763
FaeI CATG 6 cut(s) 212, 295, 695, 1210, 1247, 1303
FalI AAGNNNNNCTT 2 cut(s) 1439, 1471
FaqI GGGAC 3 cut(s) 1494, 1510, 1615
FatI CATG 6 cut(s) 208, 291, 691, 1206, 1243, 1299
FauI CCCGC 1 cut(s) 117
FauNDI CATATG 1 cut(s) 1054
FbaI TGATCA 2 cut(s) 43, 1203
Fnu4HI GCNGC 4 cut(s) 405, 1085, 1304, 1785
FokI GGATG 3 cut(s) 665, 786, 1844
FriOI GRGCYC 1 cut(s) 527
Fsp4HI GCNGC 4 cut(s) 405, 1085, 1304, 1785
FspBI CTAG 4 cut(s) 176, 633, 1770, 1826
GlaI GCGC 1 cut(s) 1793
GluI GCNGC 4 cut(s) 405, 1085, 1304, 1785
HaeII RGCGCY 1 cut(s) 1795
HaeIII GGCC 2 cut(s) 1152, 1664
HapII CCGG 2 cut(s) 608, 1409
HhaI GCGC 1 cut(s) 1794
Hin1I GRCGYC 1 cut(s) 1792
Hin1II CATG 6 cut(s) 212, 295, 695, 1210, 1247, 1303
Hin6I GCGC 1 cut(s) 1792
HinP1I GCGC 1 cut(s) 1792
HincII GTYRAC 3 cut(s) 779, 921, 1015
HindII GTYRAC 3 cut(s) 779, 921, 1015
HindIII AAGCTT 2 cut(s) 411, 753
HinfI GANTC 6 cut(s) 4, 82, 398, 530, 917, 1180
HpaII CCGG 2 cut(s) 608, 1409
HphI GGTGA 4 cut(s) 502, 623, 1550, 1605
Hpy166II GTNNAC 4 cut(s) 779, 921, 965, 1015
Hpy188I TCNGA 9 cut(s) 9, 219, 230, 529, 555, 815, 1179, 1194, 1738
Hpy188III TCNNGA 8 cut(s) 267, 520, 890, 1121, 1207, 1409, 1427, 1598
Hpy8I GTNNAC 4 cut(s) 779, 921, 965, 1015
HpyAV CCTTC 5 cut(s) 1288, 1424, 1604, 1640, 1740
HpyCH4III ACNGT 3 cut(s) 153, 560, 1474
HpyCH4IV ACGT 4 cut(s) 586, 1215, 1501, 1523
HpyCH4V TGCA 5 cut(s) 149, 318, 990, 1108, 1364
HpyF10VI GCNNNNNNNGC 1 cut(s) 410
HpyF3I CTNAG 6 cut(s) 8, 426, 526, 1122, 1599, 1737
HpySE526I ACGT 4 cut(s) 586, 1215, 1501, 1523
Hsp92I GRCGYC 1 cut(s) 1792
Hsp92II CATG 6 cut(s) 212, 295, 695, 1210, 1247, 1303
HspAI GCGC 1 cut(s) 1792
KasI GGCGCC 1 cut(s) 1791
Kpn2I TCCGGA 1 cut(s) 1408
Ksp22I TGATCA 2 cut(s) 43, 1203
Kzo9I GATC 7 cut(s) 43, 116, 178, 214, 269, 1203, 1725
LguI GCTCTTC 2 cut(s) 474, 1460
LmnI GCTCC 3 cut(s) 522, 1411, 1550
Lsp1109I GCAGC 3 cut(s) 391, 1071, 1796
LweI GCATC 7 cut(s) 606, 619, 883, 1095, 1315, 1440, 1710
MabI ACCWGGT 1 cut(s) 369
MaeI CTAG 4 cut(s) 176, 633, 1770, 1826
MaeII ACGT 4 cut(s) 586, 1215, 1501, 1523
MaeIII GTNAC 5 cut(s) 171, 274, 1137, 1602, 1858
MalI GATC 7 cut(s) 45, 118, 180, 216, 271, 1205, 1727
MboI GATC 7 cut(s) 43, 116, 178, 214, 269, 1203, 1725
MflI RGATCY 2 cut(s) 178, 269
MhlI GDGCHC 1 cut(s) 527
Mly113I GGCGCC 1 cut(s) 1792
MlyI GAGTC 2 cut(s) 926, 1189
MmeI TCCRAC 2 cut(s) 894, 1722
MnlI CCTC 9 cut(s) 67, 236, 423, 488, 1163, 1243, 1351, 1522, 1738
MroI TCCGGA 1 cut(s) 1408
MseI TTAA 8 cut(s) 651, 1041, 1089, 1325, 1344, 1367, 1389, 1713
MspA1I CMGCKG 1 cut(s) 1063
MspCI CTTAAG 1 cut(s) 1388
MspI CCGG 2 cut(s) 608, 1409
MspR9I CCNGG 3 cut(s) 352, 371, 609
Mva1269I GAATGC 1 cut(s) 1574
MvaI CCWGG 2 cut(s) 352, 371
MwoI GCNNNNNNNGC 1 cut(s) 410
NarI GGCGCC 1 cut(s) 1792
NciI CCSGG 1 cut(s) 609
NdeI CATATG 1 cut(s) 1054
NdeII GATC 7 cut(s) 43, 116, 178, 214, 269, 1203, 1725
NheI GCTAGC 1 cut(s) 1825
NlaIII CATG 6 cut(s) 212, 295, 695, 1210, 1247, 1303
NlaIV GGNNCC 2 cut(s) 1510, 1793
NmuCI GTSAC 2 cut(s) 274, 1858
NspI RCATGY 1 cut(s) 1247
PagI TCATGA 1 cut(s) 1206
PaqCI CACCTGC 1 cut(s) 1624
PciI ACATGT 1 cut(s) 1243
PciSI GCTCTTC 2 cut(s) 474, 1460
PcsI WCGNNNNNNNCGW 1 cut(s) 1520
PctI GAATGC 1 cut(s) 1574
PfeI GAWTC 4 cut(s) 4, 82, 398, 530
PfoI TCCNGGA 1 cut(s) 350
PkrI GCNGC 4 cut(s) 406, 1086, 1305, 1786
PleI GAGTC 2 cut(s) 925, 1188
PluTI GGCGCC 1 cut(s) 1795
PpsI GAGTC 2 cut(s) 925, 1188
Ppu21I YACGTR 1 cut(s) 587
PpuMI RGGWCCY 1 cut(s) 50
PscI ACATGT 1 cut(s) 1243
Psp124BI GAGCTC 1 cut(s) 527
Psp5II RGGWCCY 1 cut(s) 50
Psp6I CCWGG 2 cut(s) 350, 369
PspGI CCWGG 2 cut(s) 350, 369
PspN4I GGNNCC 2 cut(s) 1510, 1793
PspPI GGNCC 6 cut(s) 50, 367, 1479, 1508, 1662, 1849
PspPPI RGGWCCY 1 cut(s) 50
PsuI RGATCY 2 cut(s) 178, 269
PvuII CAGCTG 1 cut(s) 1063
RsaI GTAC 4 cut(s) 381, 713, 1059, 1218
RsaNI GTAC 4 cut(s) 380, 712, 1058, 1217
SacI GAGCTC 1 cut(s) 527
SapI GCTCTTC 2 cut(s) 474, 1460
SaqAI TTAA 8 cut(s) 651, 1041, 1089, 1325, 1344, 1367, 1389, 1713
SatI GCNGC 4 cut(s) 405, 1085, 1304, 1785
Sau3AI GATC 7 cut(s) 43, 116, 178, 214, 269, 1203, 1725
Sau96I GGNCC 6 cut(s) 50, 367, 1479, 1508, 1662, 1849
SchI GAGTC 2 cut(s) 926, 1189
ScrFI CCNGG 3 cut(s) 352, 371, 609
SduI GDGCHC 1 cut(s) 527
SexAI ACCWGGT 1 cut(s) 369
SfaNI GCATC 7 cut(s) 606, 619, 883, 1095, 1315, 1440, 1710
SfoI GGCGCC 1 cut(s) 1793
SinI GGWCC 5 cut(s) 50, 367, 1479, 1508, 1849
SmlI CTYRAG 2 cut(s) 1388, 1760
SmoI CTYRAG 2 cut(s) 1388, 1760
SpeI ACTAGT 1 cut(s) 1769
SsiI CCGC 5 cut(s) 110, 407, 488, 1303, 1829
SspDI GGCGCC 1 cut(s) 1791
SspI AATATT 1 cut(s) 820
SspMI CTAG 4 cut(s) 176, 633, 1770, 1826
SstI GAGCTC 1 cut(s) 527
StyD4I CCNGG 3 cut(s) 350, 369, 607
StyI CCWWGG 1 cut(s) 1528
TaaI ACNGT 3 cut(s) 153, 560, 1474
TaiI ACGT 4 cut(s) 589, 1218, 1504, 1526
TaqI TCGA 4 cut(s) 322, 663, 1426, 1514
TatI WGTACW 1 cut(s) 1057
TauI GCSGC 1 cut(s) 1306
TfiI GAWTC 4 cut(s) 4, 82, 398, 530
Tru1I TTAA 8 cut(s) 651, 1041, 1089, 1325, 1344, 1367, 1389, 1713
Tru9I TTAA 8 cut(s) 651, 1041, 1089, 1325, 1344, 1367, 1389, 1713
TscAI CASTG 2 cut(s) 156, 953
TseFI GTSAC 2 cut(s) 274, 1858
TseI GCWGC 3 cut(s) 404, 1084, 1784
Tsp45I GTSAC 2 cut(s) 274, 1858
TspDTI ATGAA 8 cut(s) 17, 197, 260, 487, 667, 1179, 1223, 1447
TspGWI ACGGA 2 cut(s) 262, 1301
TspRI CASTG 2 cut(s) 156, 953
Vha464I CTTAAG 1 cut(s) 1388
VpaK11BI GGWCC 5 cut(s) 50, 367, 1479, 1508, 1849
XagI CCTNNNNNAGG 1 cut(s) 482
XapI RAATTY 7 cut(s) 312, 970, 978, 1318, 1698, 1839, 1882
XceI RCATGY 1 cut(s) 1247
XcmI CCANNNNNNNNNTGG 1 cut(s) 1701
XspI CTAG 4 cut(s) 176, 633, 1770, 1826
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.