RLG00000026237

Cyclic nucleotide-gated ion channel 1-like

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
Physical Location & Seq
Forward (+)
1458379 .. 1470718
12340 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000026237

Sequence Viewer

Length: 1665 bp
ATGCGAATTTTTATTATTATACCTGAAGCCAAGTCATCCAAGGCTTCTGAGGTGACGAAAACACAAGCGGAAGCTCATAATTCGAAAGGGAAAATATCAGTTGAGGATATTTTGAAAATAACTAAGAGGGCTTGGGCGAAAGCTAGTAGATCATACATCCTGATTGACATTTTAGCTATTCTTCCCATACCCCAGGTAGGAATGTTCGTTTTCTTTTCGAAAATGAAGGGTCCGGTATTTTCGAAAGAAAGGAGGCTTTTCGACATTCTTATTTTGCTCCAATTTGTCCCTCGCGTTCTTCCCGTTTACTTATTATGCAGAGAACGTAAGAAAACCCTTAACAAAGCAAGCGTGTGGACAAAAGGTGTTTTCAATTTCTTTCTATACATCCTTGCAAGTCATGTAATCGGAGCTCTTTGGTACTTTTTTGCCATTCAACGAGAGATGGATTGTTGGCATTATGTTTGCCAACGTCACAAGGAATGTCAACCTAGTACCTTTAGATGTAATGAACGGCGAGATAGATTGAGAACTATCACATTGTTAGACAAACAATGTCCGATAAACCTACTGGAAGAAATGAAAGGAAAGCCCTTTAATTTTGGTATATTTGCTGATGCGCTTGATTCCGGCCTAGTGCAGTCGACTGATTTTCCTCAAAAACTCTTGAACTGTTTCTGGTGGGGGCTGCGAAATCTGAGCTCTCTTGGTCAAAACCTCCATACAAGTACCTATGCATGGGAAAACCTCTTTGCTGTGTTTATTTCCATTATAGGCTTGCTATTGTTTATATATCTCATCGGAAATTTGCAGACATATTTGCAGTTTGCAACTACAAGATCAGAGAAGCTTAGACGGAAGATGAAAACAAAAAAATTAGAGGTTGATTTGTGGCTATCTAGAAAAGGACTGCCTAGCAATTTGAAGGAAGTGATCGTGCCTATCATCGAGAAAAAACTTGATCAGAACAAAGATGTTCAAGTTGAGCACATCCTCTCTGTTCTTCCTTCAGCACATAGAAAATATATCTTGCGCTATCTTGGTCTGGCTACACTCAAGAAAGTGCCAATGCTTCAAACTATGGAGGTAAGACTGCTGAAAGCAATCTGTAAGCACCTCAAGCCGATGGACTATGCTGAGGACAGTTGCATTATTCAAGAGGGAGAGCAACTCCGTAAGATGATTTTCATCACACATGGCACTGTACAGACCTACAAGAGAAATGGTAAAGGTGGAAAAATTGGTTCCAGGTTTCTTGAGAAAGGGGACTTCTATGGATCAGACGAGCTTCTCAATTGGGCATCAAAGTTTAGCTCTTTCAACGACTTACCAATCTCGACCAGAATGGTTAAGCCTGTCACGAAAGTCGAAGTCTTTGAGCTGAGCGTGGAAGACTTGAAGAGTGTAGCCAGTGAGTATTGGTGGAATTTCACCAAGAACAAGGATCCAAAGGATTTCGACCAGTCTGTGTTGGAGGAGTTTGCAAGATCTTCCATAGAAAAAGAAATCCATCGCCGCAGGCAAGCGAAAAAGAAGCGTACAATAAGTTCTCTCAATAAGTTGGCTACTAGTCAGGGTAGTGCTAGCAATAAGTGGCAACGGCTCATCAGCAAGGTCACGAGGGATCAGATACCTTCACCAGTTGGTGCTCTAGATGGCAAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

555

Amino Acids

64.11

Weight (kDa)

9.8

Isoelectric Point (pI)

47.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ion_trans PF00520 50 - 281 1.7e-10 Ion transport protein
cNMP_binding PF00027 377 - 468 4.7e-07 Cyclic nucleotide-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000017)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07351 FvH4_1g11800 FvH4_1g11800 FvH4_1g11800 FvH4_1g11800 FvH4_1g11800 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_4g14360 FvH4_6g13561 FvH4_6g13562 FvH4_6g13580 FvH4_6g13590 FvH4_6g13590 FvH4_6g13590 FvH4_6g13731 FvH4_6g13770 FvH4_6g13800 FvH4_6g13800 FvH4_6g13860 FvH4_6g13870 FvH4_6g13870 FvH4_6g13870 FvH4_6g13870 FvH4_6g13870 FvH4_6g13890 FvH4_6g33801 FvH4_7g13020 FvH4_7g13270 FvH4_7g13270 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g14580 FvH4_7g14580 FvH4_7g14580 FvH4_7g14600 FvH4_7g14600 FvH4_7g20030 FvH4_7g20510 FvH4_7g20510 FvH4_7g20510 FvH4_7g20670 FvH4_7g20670 FvH4_7g20670 FvH4_7g20670 FvH4_7g20690 FvH4_7g20690 FvH4_7g31930 FvH4_7g31930 FvH4_7g31940 FvH4_7g31940
malus_domestica MD01G1115700.v1.1 MD01G1115800.v1.1 MD01G1116600.v1.1 MD01G1116700.v1.1 MD01G1117000.v1.1 MD01G1225000.v1.1 MD02G1077900.v1.1 MD02G1078000.v1.1 MD02G1078200.v1.1 MD02G1078400.v1.1 MD02G1084300.v1.1 MD04G1004700.v1.1 MD04G1123100.v1.1 MD04G1123200.v1.1 MD04G1128000.v1.1 MD04G1128400.v1.1 MD05G1299700.v1.1 MD05G1300000.v1.1 MD07G1184000.v1.1 MD07G1292300.v1.1 MD08G1214800.v1.1
prunus_persica Prupe.1G205100_v2.0.a1 Prupe.1G205100_v2.0.a1 Prupe.1G205200_v2.0.a1 Prupe.2G222300_v2.0.a1 Prupe.2G223300_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223600_v2.0.a1 Prupe.2G223600_v2.0.a1 Prupe.2G223600_v2.0.a1 Prupe.2G223700_v2.0.a1 Prupe.2G223700_v2.0.a1 Prupe.2G223700_v2.0.a1 Prupe.2G223700_v2.0.a1 Prupe.2G223800_v2.0.a1 Prupe.2G223900_v2.0.a1 Prupe.2G224000_v2.0.a1 Prupe.5G162000_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G291000_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G210400_v2.0.a1 Prupe.7G210600_v2.0.a1 Prupe.7G210700_v2.0.a1 Prupe.7G210800_v2.0.a1 Prupe.7G210900_v2.0.a1 Prupe.8G097600_v2.0.a1 Prupe.8G097800_v2.0.a1 Prupe.8G097800_v2.0.a1
pyrus_communis pycom01g14430 pycom01g14440 pycom01g23130 pycom01g23160 pycom01g23330 pycom02g06210 pycom02g06220 pycom02g06250 pycom02g06270 pycom02g06710 pycom03g05360 pycom03g05380 pycom04g11470 pycom04g11480 pycom04g11520 pycom04g11560 pycom04g11600 pycom04g11610 pycom04g11650 pycom04g11660 pycom04g11670 pycom05g27790 pycom07g17630 pycom08g20960 pycom126g00020 pycom126g00030
rosa_chinensis RchiOBHm_Chr1g0318251 RchiOBHm_Chr1g0318731 RchiOBHm_Chr1g0339101 RchiOBHm_Chr1g0339111 RchiOBHm_Chr1g0347151 RchiOBHm_Chr1g0347161 RchiOBHm_Chr1g0347221 RchiOBHm_Chr1g0352401 RchiOBHm_Chr1g0352441 RchiOBHm_Chr1g0352461 RchiOBHm_Chr1g0356131 RchiOBHm_Chr1g0363991 RchiOBHm_Chr1g0364791 RchiOBHm_Chr1g0364801 RchiOBHm_Chr1g0364811 RchiOBHm_Chr1g0364851 RchiOBHm_Chr1g0364951 RchiOBHm_Chr1g0370821 RchiOBHm_Chr1g0381221 RchiOBHm_Chr1g0381231 RchiOBHm_Chr1g0381261 RchiOBHm_Chr1g0381271 RchiOBHm_Chr1g0381341 RchiOBHm_Chr1g0381351 RchiOBHm_Chr1g0381391 RchiOBHm_Chr1g0381801 RchiOBHm_Chr1g0381821 RchiOBHm_Chr2g0093241 RchiOBHm_Chr2g0116391 RchiOBHm_Chr3g0466441 RchiOBHm_Chr3g0466631 RchiOBHm_Chr3g0466651 RchiOBHm_Chr3g0496921 RchiOBHm_Chr4g0400441 RchiOBHm_Chr4g0400501 RchiOBHm_Chr4g0400511 RchiOBHm_Chr4g0400691 RchiOBHm_Chr4g0400701 RchiOBHm_Chr4g0404331 RchiOBHm_Chr5g0052101 RchiOBHm_Chr5g0052111 RchiOBHm_Chr5g0052171 RchiOBHm_Chr5g0052181 RchiOBHm_Chr6g0264161 RchiOBHm_Chr6g0265551 RchiOBHm_Chr7g0213571 RchiOBHm_Chr7g0213581
rosa_laevigata RLG00000002796 RLG00000003261 RLG00000007935 RLG00000007936 RLG00000009187 RLG00000014179 RLG00000016381 RLG00000018265 RLG00000024558 RLG00000024574 RLG00000026232 RLG00000026234 RLG00000026236 RLG00000026237 RLG00000027459 RLG00000027461 RLG00000027463 RLG00000027530 RLG00000028103 RLG00000028304 RLG00000028333 RLG00000029214 RLG00000029848 RLG00000029951 RLG00000030115 RLG00000030552 RLG00000033668 RLG00000034840 RLG00000034841 RLG00000034842 RLG00000035830
rosa_multiflora Rmu_sc0000654.1_g000004 Rmu_sc0000675.1_g000025 Rmu_sc0001075.1_g000002 Rmu_sc0001726.1_g000004 Rmu_sc0001772.1_g000061 Rmu_sc0001772.1_g000065 Rmu_sc0002067.1_g000002 Rmu_sc0002183.1_g000001 Rmu_sc0002183.1_g000006 Rmu_sc0002244.1_g000003 Rmu_sc0002313.1_g000004 Rmu_sc0002319.1_g000004 Rmu_sc0002539.1_g000085 Rmu_sc0002636.1_g000004 Rmu_sc0003229.1_g000007 Rmu_sc0003313.1_g000020 Rmu_sc0003546.1_g000007 Rmu_sc0003724.1_g000015 Rmu_sc0003936.1_g000029 Rmu_sc0004191.1_g000067 Rmu_sc0004525.1_g000012 Rmu_sc0005122.1_g000009 Rmu_sc0005255.1_g000040 Rmu_sc0005338.1_g000016 Rmu_sc0005584.1_g000008 Rmu_sc0006460.1_g000013 Rmu_sc0006872.1_g000011 Rmu_sc0006872.1_g000015 Rmu_sc0006872.1_g000016 Rmu_sc0006952.1_g000013 Rmu_sc0007342.1_g000005 Rmu_sc0007342.1_g000006 Rmu_sc0008418.1_g000003 Rmu_sc0008418.1_g000006 Rmu_sc0008636.1_g000007 Rmu_sc0008636.1_g000008 Rmu_sc0009205.1_g000014 Rmu_sc0009365.1_g000014 Rmu_sc0009917.1_g000002 Rmu_sc0019289.1_g000003 Rmu_ssc0000098.1_g000011 Rmu_ssc0000098.1_g000012 Rmu_ssc0000167.1_g000018 Rmu_ssc0000167.1_g000024 Rmu_ssc0000326.1_g000015
rosa_roxburghii Rroxscaffold_166G00440780 Rroxscaffold_176G00431500 Rroxscaffold_1G00015080 Rroxscaffold_1G00027880 Rroxscaffold_1G00027890 Rroxscaffold_1G00027920 Rroxscaffold_2G00127250 Rroxscaffold_2G00148380 Rroxscaffold_3G00219450 Rroxscaffold_3G00232170 Rroxscaffold_3G00232210 Rroxscaffold_3G00242230 Rroxscaffold_3G00242240 Rroxscaffold_3G00244790 Rroxscaffold_3G00245790 Rroxscaffold_4G00278400 Rroxscaffold_4G00278430 Rroxscaffold_4G00278670 Rroxscaffold_4G00278680 Rroxscaffold_4G00278690 Rroxscaffold_4G00278700 Rroxscaffold_4G00278720 Rroxscaffold_4G00291690 Rroxscaffold_4G00292070 Rroxscaffold_4G00292090 Rroxscaffold_4G00292770 Rroxscaffold_4G00302240 Rroxscaffold_4G00302860 Rroxscaffold_4G00311320 Rroxscaffold_4G00311330 Rroxscaffold_4G00320570 Rroxscaffold_4G00322050 Rroxscaffold_4G00329480 Rroxscaffold_4G00329730 Rroxscaffold_5G00345500 Rroxscaffold_5G00345510 Rroxscaffold_5G00360830 Rroxscaffold_5G00360840 Rroxscaffold_6G00393450 Rroxscaffold_6G00404030 Rroxscaffold_6G00414220 Rroxscaffold_6G00414230 Rroxscaffold_6G00414280 Rroxscaffold_6G00414290 Rroxscaffold_6G00414350 Rroxscaffold_6G00414470 Rroxscaffold_7G00202570 Rroxscaffold_7G00203460 Rroxscaffold_7G00203470
rosa_rugosa Rorug01G0020500 Rorug01G0020600 Rorug01G0020700 Rorug01G0143700.1 Rorug01G0225700 Rorug01G0228500 Rorug01G0228600 Rorug01G0228600 Rorug01G0228700 Rorug01G0228800 Rorug01G0228800 Rorug01G0229000 Rorug01G0229300 Rorug01G0229400 Rorug01G0229600 Rorug01G0229700 Rorug01G0232200 Rorug01G0232600 Rorug01G0232600 Rorug01G0311900 Rorug01G0311900 Rorug01G0318400 Rorug01G0318500 Rorug01G0318500 Rorug01G0318500 Rorug01G0427900 Rorug01G0427900 Rorug01G0428000 Rorug01G0428200 Rorug01G0428300 Rorug01G0428400 Rorug01G0431500 Rorug01G0431600 Rorug01G0431600 Rorug02G0033800 Rorug02G0206300 Rorug03G0081900 Rorug03G0083200 Rorug03G0083200 Rorug03G0083300 Rorug04G0025100 Rorug04G0025100 Rorug04G0025200 Rorug04G0025300 Rorug04G0058600 Rorug04G0058700 Rorug04G0058800 Rorug04G0098400 Rorug04G0098500 Rorug05G0274500 Rorug05G0274600 Rorug05G0274800 Rorug06G0008500 Rorug06G0009100 Rorug06G0018000
rosa_samantha Rh1AG031700 Rh1AG036100 Rh1AG089800 Rh1AG239800 Rh1AG239900 Rh1AG242000 Rh1AG242300 Rh1AG245600 Rh1AG262600 Rh1AG319700 Rh1AG319800 Rh1AG319900 Rh1AG327200 Rh1AG451100 Rh1AG451200 Rh1AG451300 Rh1AG451600 Rh1AG451700 Rh1BG027200 Rh1BG071600 Rh1BG090700 Rh1BG211000 Rh1BG213000 Rh1BG213500 Rh1BG282800 Rh1BG288400 Rh1BG408100 Rh1BG408200 Rh1BG408400 Rh1BG408700 Rh1CG026300 Rh1CG028300 Rh1CG224100 Rh1CG226000 Rh1CG226100 Rh1CG229300 Rh1CG229400 Rh1CG245900 Rh1CG299200 Rh1CG299400 Rh1CG299500 Rh1CG303300 Rh1CG305100 Rh1CG422500 Rh1CG422600 Rh1CG422700 Rh1CG422800 Rh1CG422900 Rh1CG423100 Rh1CG423300 Rh1CG423400 Rh1CG426300 Rh1CG426600 Rh1DG239300 Rh1DG239600 Rh1DG258300 Rh1DG314200 Rh1DG314300 Rh1DG314400 Rh1DG320000 Rh1DG439200 Rh1DG439400 Rh1DG439500 Rh1DG439700 Rh1DG440000 Rh1DG443800 Rh2AG261800 Rh2BG080900 Rh2CG083300 Rh2DG078900 Rh2DG270000 Rh2DG270100 Rh3AG128400 Rh3AG130100 Rh3AG130500 Rh3AG332500 Rh3AG332600 Rh3AG332800 Rh3BG149700 Rh3BG151500 Rh3CG151400 Rh3CG354500 Rh3CG366800 Rh3DG150500 Rh3DG152200 Rh4AG101400 Rh4AG102900 Rh4AG148300 Rh4AG148600 Rh4BG098000 Rh4CG111100 Rh4CG111300 Rh4CG155100 Rh4DG094800 Rh5AG213600 Rh5AG346900 Rh5AG347000 Rh5BG357500 Rh5BG357700 Rh5BG485400 Rh5CG383100 Rh5CG383200 Rh5CG383300 Rh5CG509900 Rh5DG373000 Rh5DG373200 Rh6BG054300 Rh6BG126300 Rh6CG125100 Rh6CG185300 Rh6DG177000 Rh7AG276100 Rh7AG276200 Rh7BG230500 Rh7BG270500 Rh7BG364000 Rh7CG250100 Rh7CG295200 Rh7CG295300 Rh7DG389700
rosa_wichuraiana Rw0G001190 Rw0G010680 Rw0G013360 Rw0G014310 Rw0G014890 Rw0G020310 Rw0G021350 Rw0G022510 Rw1G003360 Rw1G004330 Rw1G006930 Rw1G008310 Rw1G021090 Rw1G021150 Rw1G021210 Rw1G023200 Rw1G023210 Rw1G028340 Rw1G028350 Rw1G028990 Rw1G032510 Rw1G039370 Rw1G039400 Rw1G039410 Rw1G039420 Rw1G039430 Rw2G006700 Rw2G020550 Rw2G020580 Rw3G012130 Rw3G012300 Rw3G012310 Rw3G028220 Rw3G029230 Rw5G021600 Rw5G032790 Rw6G011240 Rw7G027670 Rw7G032780

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 644
AccII CGCG 1 cut(s) 294
AciI CCGC 2 cut(s) 68, 1516
AclWI GGATC 4 cut(s) 1285, 1439, 1452, 1632
AcsI RAATTY 3 cut(s) 6, 805, 1426
AcuI CTGAAG 2 cut(s) 45, 993
AfaI GTAC 5 cut(s) 422, 496, 730, 1206, 1540
AfiI CCNNNNNNNGG 2 cut(s) 197, 738
AhlI ACTAGT 1 cut(s) 1568
AjnI CCWGG 2 cut(s) 192, 1247
AluBI AGCT 9 cut(s) 74, 143, 176, 413, 702, 850, 1288, 1314, 1381
AluI AGCT 9 cut(s) 74, 143, 176, 413, 702, 850, 1288, 1314, 1381
Alw21I GWGCWC 4 cut(s) 415, 704, 990, 1651
AlwI GGATC 4 cut(s) 1285, 1439, 1452, 1632
AoxI GGCC 1 cut(s) 631
ApeKI GCWGC 1 cut(s) 688
ApoI RAATTY 3 cut(s) 6, 805, 1426
Asp700I GAANNNNTTC 1 cut(s) 674
AspLEI GCGC 2 cut(s) 622, 1035
AspS9I GGNCC 1 cut(s) 230
AsuHPI GGTGA 3 cut(s) 64, 1423, 1629
AsuII TTCGAA 3 cut(s) 83, 218, 242
AsuNHI GCTAGC 1 cut(s) 1583
AvaII GGWCC 1 cut(s) 230
BamHI GGATCC 1 cut(s) 1444
BanII GRGCYC 2 cut(s) 415, 704
BauI CACGAG 1 cut(s) 1618
BbsI GAAGAC 1 cut(s) 1398
Bbv12I GWGCWC 4 cut(s) 415, 704, 990, 1651
BbvCI CCTCAGC 1 cut(s) 1137
BbvI GCAGC 1 cut(s) 675
BccI CCATC 4 cut(s) 439, 1120, 1518, 1649
BceAI ACGGC 2 cut(s) 530, 1616
BciT130I CCWGG 2 cut(s) 194, 1249
BclI TGATCA 1 cut(s) 961
BcuI ACTAGT 1 cut(s) 1568
BfaI CTAG 8 cut(s) 144, 492, 635, 900, 915, 1569, 1584, 1652
BglII AGATCT 1 cut(s) 1487
BisI GCNGC 2 cut(s) 689, 1516
BlpI GCTNAGC 1 cut(s) 1382
BlsI GCNGC 2 cut(s) 690, 1517
Bme1390I CCNGG 2 cut(s) 194, 1249
Bme18I GGWCC 1 cut(s) 230
BmgT120I GGNCC 1 cut(s) 230
BmiI GGNNCC 3 cut(s) 231, 1246, 1446
BmrFI CCNGG 2 cut(s) 194, 1249
BmsI GCATC 2 cut(s) 607, 1310
BmtI GCTAGC 1 cut(s) 1587
BpiI GAAGAC 1 cut(s) 1398
BplI GAGNNNNNCTC 2 cut(s) 1155, 1187
Bpu10I CCTNAGC 1 cut(s) 1137
Bpu1102I GCTNAGC 1 cut(s) 1382
Bpu14I TTCGAA 3 cut(s) 83, 218, 242
BpuEI CTTGAG 3 cut(s) 1040, 1103, 1277
BsaBI GATNNNNATC 1 cut(s) 1187
BsaJI CCNNGG 2 cut(s) 39, 192
BsaWI WCCGGW 1 cut(s) 232
Bsc4I CCNNNNNNNGG 2 cut(s) 197, 738
Bse1I ACTGG 4 cut(s) 576, 1410, 1462, 1640
Bse8I GATNNNNATC 1 cut(s) 1187
BseBI CCWGG 2 cut(s) 194, 1249
BseDI CCNNGG 2 cut(s) 39, 192
BseGI GGATG 4 cut(s) 35, 156, 387, 990
BseJI GATNNNNATC 1 cut(s) 1187
BseLI CCNNNNNNNGG 2 cut(s) 197, 738
BseMII CTCAG 4 cut(s) 39, 689, 1128, 1373
BseNI ACTGG 4 cut(s) 576, 1410, 1462, 1640
BseRI GAGGAG 1 cut(s) 1490
BseXI GCAGC 1 cut(s) 675
BsgI GTGCAG 1 cut(s) 659
Bsh1236I CGCG 1 cut(s) 294
BshFI GGCC 1 cut(s) 633
BsiHKAI GWGCWC 4 cut(s) 415, 704, 990, 1651
BsiSI CCGG 2 cut(s) 233, 630
BslFI GGGAC 2 cut(s) 272, 1280
BslI CCNNNNNNNGG 2 cut(s) 197, 738
BsmFI GGGAC 2 cut(s) 272, 1280
BsnI GGCC 1 cut(s) 633
Bsp119I TTCGAA 3 cut(s) 83, 218, 242
Bsp1286I GDGCHC 4 cut(s) 415, 704, 990, 1651
Bsp1407I TGTACA 1 cut(s) 1204
Bsp143I GATC 8 cut(s) 149, 839, 933, 961, 1277, 1444, 1487, 1624
Bsp1720I GCTNAGC 1 cut(s) 1382
BspACI CCGC 2 cut(s) 68, 1516
BspANI GGCC 1 cut(s) 633
BspCNI CTCAG 4 cut(s) 40, 690, 1129, 1374
BspFNI CGCG 1 cut(s) 294
BspLI GGNNCC 3 cut(s) 231, 1246, 1446
BspOI GCTAGC 1 cut(s) 1587
BspPI GGATC 4 cut(s) 1285, 1439, 1452, 1632
BspT104I TTCGAA 3 cut(s) 83, 218, 242
BsrGI TGTACA 1 cut(s) 1204
BsrI ACTGG 4 cut(s) 576, 1410, 1462, 1640
BssECI CCNNGG 2 cut(s) 39, 192
BssMI GATC 8 cut(s) 149, 839, 933, 961, 1277, 1444, 1487, 1624
BssSI CACGAG 1 cut(s) 1618
BssT1I CCWWGG 1 cut(s) 39
Bst2BI CACGAG 1 cut(s) 1618
Bst2UI CCWGG 2 cut(s) 194, 1249
Bst4CI ACNGT 3 cut(s) 674, 1145, 1204
Bst6I CTCTTC 1 cut(s) 1394
BstAUI TGTACA 1 cut(s) 1204
BstBI TTCGAA 3 cut(s) 83, 218, 242
BstC8I GCNNGC 5 cut(s) 349, 779, 1520, 1524, 1585
BstDEI CTNAG 6 cut(s) 48, 123, 698, 851, 1137, 1382
BstF5I GGATG 4 cut(s) 35, 156, 387, 990
BstFNI CGCG 1 cut(s) 294
BstHHI GCGC 2 cut(s) 622, 1035
BstKTI GATC 8 cut(s) 152, 842, 936, 964, 1280, 1447, 1490, 1627
BstMBI GATC 8 cut(s) 149, 839, 933, 961, 1277, 1444, 1487, 1624
BstMWI GCNNNNNNNGC 1 cut(s) 1120
BstNI CCWGG 2 cut(s) 194, 1249
BstSCI CCNGG 2 cut(s) 192, 1247
BstUI CGCG 1 cut(s) 294
BstV1I GCAGC 1 cut(s) 675
BstV2I GAAGAC 1 cut(s) 1398
BstX2I RGATCY 2 cut(s) 1444, 1487
BstYI RGATCY 2 cut(s) 1444, 1487
BsuRI GGCC 1 cut(s) 633
BtgZI GCGATG 1 cut(s) 1496
BtsCI GGATG 4 cut(s) 35, 156, 387, 990
BtsIMutI CAGTG 2 cut(s) 1200, 1417
Cac8I GCNNGC 5 cut(s) 349, 779, 1520, 1524, 1585
CfoI GCGC 2 cut(s) 622, 1035
Cfr13I GGNCC 1 cut(s) 230
Csp6I GTAC 5 cut(s) 421, 495, 729, 1205, 1539
CviAII CATG 3 cut(s) 401, 738, 1196
CviQI GTAC 5 cut(s) 421, 495, 729, 1205, 1539
DdeI CTNAG 6 cut(s) 48, 123, 698, 851, 1137, 1382
DpnI GATC 8 cut(s) 151, 841, 935, 963, 1279, 1446, 1489, 1626
DpnII GATC 8 cut(s) 149, 839, 933, 961, 1277, 1444, 1487, 1624
Eam1104I CTCTTC 1 cut(s) 1394
EarI CTCTTC 1 cut(s) 1394
Ecl136II GAGCTC 2 cut(s) 413, 702
Eco130I CCWWGG 1 cut(s) 39
Eco24I GRGCYC 2 cut(s) 415, 704
Eco47I GGWCC 1 cut(s) 230
Eco53kI GAGCTC 2 cut(s) 413, 702
Eco57I CTGAAG 2 cut(s) 45, 993
EcoICRI GAGCTC 2 cut(s) 413, 702
EcoRII CCWGG 2 cut(s) 192, 1247
EcoT14I CCWWGG 1 cut(s) 39
EcoT22I ATGCAT 1 cut(s) 739
EcoT38I GRGCYC 2 cut(s) 415, 704
ErhI CCWWGG 1 cut(s) 39
FaeI CATG 3 cut(s) 404, 741, 1199
FaqI GGGAC 2 cut(s) 272, 1280
FatI CATG 3 cut(s) 400, 737, 1195
FbaI TGATCA 1 cut(s) 961
FblI GTMKAC 1 cut(s) 644
Fnu4HI GCNGC 2 cut(s) 689, 1516
FokI GGATG 4 cut(s) 22, 143, 374, 977
FriOI GRGCYC 2 cut(s) 415, 704
Fsp4HI GCNGC 2 cut(s) 689, 1516
FspBI CTAG 8 cut(s) 144, 492, 635, 900, 915, 1569, 1584, 1652
GlaI GCGC 2 cut(s) 621, 1034
GluI GCNGC 2 cut(s) 689, 1516
HaeIII GGCC 1 cut(s) 633
HapII CCGG 2 cut(s) 233, 630
HhaI GCGC 2 cut(s) 622, 1035
Hin1II CATG 3 cut(s) 404, 741, 1199
Hin6I GCGC 2 cut(s) 620, 1033
HinP1I GCGC 2 cut(s) 620, 1033
HincII GTYRAC 2 cut(s) 488, 645
HindII GTYRAC 2 cut(s) 488, 645
HindIII AAGCTT 1 cut(s) 848
HinfI GANTC 1 cut(s) 626
HpaII CCGG 2 cut(s) 233, 630
HphI GGTGA 3 cut(s) 64, 1423, 1629
Hpy166II GTNNAC 4 cut(s) 307, 357, 488, 645
Hpy188I TCNGA 9 cut(s) 49, 410, 561, 699, 803, 844, 966, 1282, 1629
Hpy8I GTNNAC 4 cut(s) 307, 357, 488, 645
HpyAV CCTTC 4 cut(s) 220, 919, 1017, 1644
HpyCH4III ACNGT 3 cut(s) 674, 1145, 1204
HpyCH4IV ACGT 2 cut(s) 325, 472
HpyCH4V TGCA 9 cut(s) 318, 395, 640, 737, 811, 823, 830, 1149, 1484
HpyF10VI GCNNNNNNNGC 1 cut(s) 1120
HpyF3I CTNAG 6 cut(s) 48, 123, 698, 851, 1137, 1382
HpySE526I ACGT 2 cut(s) 325, 472
Hsp92II CATG 3 cut(s) 404, 741, 1199
HspAI GCGC 2 cut(s) 620, 1033
Ksp22I TGATCA 1 cut(s) 961
Kzo9I GATC 8 cut(s) 149, 839, 933, 961, 1277, 1444, 1487, 1624
LmnI GCTCC 2 cut(s) 282, 410
Lsp1109I GCAGC 1 cut(s) 675
LweI GCATC 2 cut(s) 607, 1310
MaeI CTAG 8 cut(s) 144, 492, 635, 900, 915, 1569, 1584, 1652
MaeII ACGT 2 cut(s) 325, 472
MaeIII GTNAC 4 cut(s) 52, 473, 1357, 1615
MalI GATC 8 cut(s) 151, 841, 935, 963, 1279, 1446, 1489, 1626
MboI GATC 8 cut(s) 149, 839, 933, 961, 1277, 1444, 1487, 1624
MboII GAAGA 8 cut(s) 173, 290, 587, 871, 995, 1403, 1411, 1482
MfeI CAATTG 1 cut(s) 1294
MflI RGATCY 2 cut(s) 1444, 1487
MhlI GDGCHC 4 cut(s) 415, 704, 990, 1651
MmeI TCCRAC 1 cut(s) 1452
Mph1103I ATGCAT 1 cut(s) 739
MroXI GAANNNNTTC 1 cut(s) 674
MseI TTAA 3 cut(s) 339, 597, 1350
MspI CCGG 2 cut(s) 233, 630
MspR9I CCNGG 2 cut(s) 194, 1249
MunI CAATTG 1 cut(s) 1294
MvaI CCWGG 2 cut(s) 194, 1249
MvnI CGCG 1 cut(s) 294
MwoI GCNNNNNNNGC 1 cut(s) 1120
NdeII GATC 8 cut(s) 149, 839, 933, 961, 1277, 1444, 1487, 1624
NheI GCTAGC 1 cut(s) 1583
NlaIII CATG 3 cut(s) 404, 741, 1199
NlaIV GGNNCC 3 cut(s) 231, 1246, 1446
NmuCI GTSAC 4 cut(s) 52, 473, 1357, 1615
NsiI ATGCAT 1 cut(s) 739
NspV TTCGAA 3 cut(s) 83, 218, 242
PdmI GAANNNNTTC 1 cut(s) 674
PfeI GAWTC 1 cut(s) 626
PkrI GCNGC 2 cut(s) 690, 1517
Psp124BI GAGCTC 2 cut(s) 415, 704
Psp6I CCWGG 2 cut(s) 192, 1247
PspGI CCWGG 2 cut(s) 192, 1247
PspN4I GGNNCC 3 cut(s) 231, 1246, 1446
PspPI GGNCC 1 cut(s) 230
PsrI GAACNNNNNNTAC 2 cut(s) 1531, 1563
PsuI RGATCY 2 cut(s) 1444, 1487
RsaI GTAC 5 cut(s) 422, 496, 730, 1206, 1540
RsaNI GTAC 5 cut(s) 421, 495, 729, 1205, 1539
SacI GAGCTC 2 cut(s) 415, 704
SalI GTCGAC 1 cut(s) 643
SaqAI TTAA 3 cut(s) 339, 597, 1350
SatI GCNGC 2 cut(s) 689, 1516
Sau3AI GATC 8 cut(s) 149, 839, 933, 961, 1277, 1444, 1487, 1624
Sau96I GGNCC 1 cut(s) 230
ScrFI CCNGG 2 cut(s) 194, 1249
SduI GDGCHC 4 cut(s) 415, 704, 990, 1651
SfaNI GCATC 2 cut(s) 607, 1310
SfuI TTCGAA 3 cut(s) 83, 218, 242
SinI GGWCC 1 cut(s) 230
SmlI CTYRAG 3 cut(s) 1055, 1118, 1256
SmoI CTYRAG 3 cut(s) 1055, 1118, 1256
SpeI ACTAGT 1 cut(s) 1568
SsiI CCGC 2 cut(s) 68, 1516
SspMI CTAG 8 cut(s) 144, 492, 635, 900, 915, 1569, 1584, 1652
SstI GAGCTC 2 cut(s) 415, 704
StyD4I CCNGG 2 cut(s) 192, 1247
StyI CCWWGG 1 cut(s) 39
TaaI ACNGT 3 cut(s) 674, 1145, 1204
TaiI ACGT 2 cut(s) 328, 475
TaqI TCGA 9 cut(s) 83, 218, 242, 261, 644, 948, 1337, 1368, 1458
TatI WGTACW 1 cut(s) 1204
TauI GCSGC 1 cut(s) 1518
TfiI GAWTC 1 cut(s) 626
Tru1I TTAA 3 cut(s) 339, 597, 1350
Tru9I TTAA 3 cut(s) 339, 597, 1350
TscAI CASTG 2 cut(s) 1207, 1417
TseFI GTSAC 4 cut(s) 52, 473, 1357, 1615
TseI GCWGC 1 cut(s) 688
Tsp45I GTSAC 4 cut(s) 52, 473, 1357, 1615
TspDTI ATGAA 5 cut(s) 239, 525, 596, 878, 1177
TspGWI ACGGA 2 cut(s) 871, 1163
TspRI CASTG 2 cut(s) 1207, 1417
VpaK11BI GGWCC 1 cut(s) 230
XapI RAATTY 3 cut(s) 6, 805, 1426
XbaI TCTAGA 2 cut(s) 899, 1651
XmiI GTMKAC 1 cut(s) 644
XmnI GAANNNNTTC 1 cut(s) 674
XspI CTAG 8 cut(s) 144, 492, 635, 900, 915, 1569, 1584, 1652
Zsp2I ATGCAT 1 cut(s) 739
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.