Rh1CG226100

Cyclic nucleotide-gated ion channel 1-like

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1C
Physical Location & Seq
Forward (+)
47919136 .. 47931437
12302 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1CG226100.1

Sequence Viewer

Length: 1893 bp
ATGAATGGGTGGCCAACCAATGATGCAGTGGCAATTGAGCTACGTATTCTCGAAGAAGATCGAGGAAAAAGTACAACAGTGAGGGAAAAGCTCACAGCAGAAACTCATCAGGCCAAGAATTGGTGGAATACAATCTTTATTATATCATGTGCATGTACCGTCTTCAATGATCCTATCTTCTGTTATATCACGGCCATTGACAACGAAAATAAGTGCTTCACGATGAACAAGAATTTAGCGAAGAATTATGTTTATACTCGAACAGCCACAGATGTTTTTTACCTGCTGGACTTTTTTATTTCTAAGTGTGGATGTTGTTGCTGTAGAGGTAGGAGATCATCCAAGTCATGCGTTGCTAAGATGTTATCCATTATGTCTCGCATCTTCGTTTCTCTCCCCATTGCACAGATATATGCAGCAGGGGGGATGAATGCAGATCTACACCCTTTTACTAGAGAGTATCTTCTTTTCACTTGGCTTCAATATGCATTACGGATTTACTACATCCATGATTGGTTAAAGCGGCGTCCTATCATAGACATAACCCGAGTTAAAAGATGGATTAGACCTATATTGGGTTTTTTTCCCTTCATCCTTGCTTCTCATCTTTTTGGAGCCTTCTGGTACCTTTTTGCAACTCGGAGACAGCTTCGCTGTTGGTTATCGACGACCCATAAAATCATCGCTGACAATCGAACTACTCTAGGTCCAGGATATCCGACATATATGTGTGCAATGAATCCTAATGAAACCTATTATAATGATACTAAAATCTGGCTTTGGGATGAATTATGCCCTTTGAAAGAAGCTGATCCAAAGGCGTTCGACGCTGGCATATATTTTTACGCTCTGCAATCTAATGTGGTTAGTCCATCGCATCCTCTCTTACAAAGAATATTCCAGTCTTTTTGGTGGGCTCTAAGAAATATGAGTTCTTTTGGCTCAAATCTATTTAGCAGTATGGATACGTTGGAAATCTTCTTTTCTGTTATGATATCTGCAACTGGCATGGCACTGTTTTTAGTATATCTCAATGCAATGGTGCAGGAGTCGAAAGAAAGGTCAAATAAGCGTATGTTGAAAGAGAAGAAGCAATTGATGAAACCAGATGTCGATCTGTGGTTATCTAAATACTACCCCTCTAAGGATAACGAAAAAATGGTGACCAGAGAGAAAAATGAAAATTTAAAGGCAGCGATCATGGAAAACATACACAAACTCAGAGAAAACAGTGATCTTGATGTGCAAAATATCCTTGGTATTCTTCCCATAAAAGACAAACAAAGCATCATGTCTTTTCTCTTCTCAGCTTCATTGAAGAAGGAGCCAGTGTTTCAAACCATAAATAAAAAGGTGCTAAAAGCAATTTGTCAACATCTTGTGCCACTGACCTACACTGAAGATAGCTATATTGTCCAAGAAGGGAAACCACTTGGGAAGATGCTCTTATTCATTCAAGGCACTGTAGTAACCTACTCCCATGGTGAAACCAGCAGTGATTCCTCAAGCAACAAGTGGCTTGAAAAAGGAGATTTTTATGGCGATGAACTCCTAAATTGGGCATTCAAATCTCCCTTGTTTTCTGATTTACCTATCTCGACTACGAATGTCGTCGCCCAAGAAAAGGTTGAAGCATTTGCTATTAGAGCCAAAGACTTGAAGAGTATTTGCTTTAAATTCTGGTGGCTTTTTAGTAGAGAAGTAAATGCCTCTCAATTGGAGCAGTGGAAGCATTTGGCAGCATCTTCCATACAAACAACTTGGCGCCATCGTCAAGTAAGGATCCGTTTGGCAGCGTCTTATGTACAACCAAACAGTTGCCTCCATCATCGTGCAAAGCCTATAGGCCCAACTCACTGGAACAGAATTGTCGTAGATGAGTTCAAACATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

630

Amino Acids

73.28

Weight (kDa)

9.22

Isoelectric Point (pI)

47.06

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000017)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07351 FvH4_1g11800 FvH4_1g11800 FvH4_1g11800 FvH4_1g11800 FvH4_1g11800 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_4g14360 FvH4_6g13561 FvH4_6g13562 FvH4_6g13580 FvH4_6g13590 FvH4_6g13590 FvH4_6g13590 FvH4_6g13731 FvH4_6g13770 FvH4_6g13800 FvH4_6g13800 FvH4_6g13860 FvH4_6g13870 FvH4_6g13870 FvH4_6g13870 FvH4_6g13870 FvH4_6g13870 FvH4_6g13890 FvH4_6g33801 FvH4_7g13020 FvH4_7g13270 FvH4_7g13270 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g14580 FvH4_7g14580 FvH4_7g14580 FvH4_7g14600 FvH4_7g14600 FvH4_7g20030 FvH4_7g20510 FvH4_7g20510 FvH4_7g20510 FvH4_7g20670 FvH4_7g20670 FvH4_7g20670 FvH4_7g20670 FvH4_7g20690 FvH4_7g20690 FvH4_7g31930 FvH4_7g31930 FvH4_7g31940 FvH4_7g31940
malus_domestica MD01G1115700.v1.1 MD01G1115800.v1.1 MD01G1116600.v1.1 MD01G1116700.v1.1 MD01G1117000.v1.1 MD01G1225000.v1.1 MD02G1077900.v1.1 MD02G1078000.v1.1 MD02G1078200.v1.1 MD02G1078400.v1.1 MD02G1084300.v1.1 MD04G1004700.v1.1 MD04G1123100.v1.1 MD04G1123200.v1.1 MD04G1128000.v1.1 MD04G1128400.v1.1 MD05G1299700.v1.1 MD05G1300000.v1.1 MD07G1184000.v1.1 MD07G1292300.v1.1 MD08G1214800.v1.1
prunus_persica Prupe.1G205100_v2.0.a1 Prupe.1G205100_v2.0.a1 Prupe.1G205200_v2.0.a1 Prupe.2G222300_v2.0.a1 Prupe.2G223300_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223600_v2.0.a1 Prupe.2G223600_v2.0.a1 Prupe.2G223600_v2.0.a1 Prupe.2G223700_v2.0.a1 Prupe.2G223700_v2.0.a1 Prupe.2G223700_v2.0.a1 Prupe.2G223700_v2.0.a1 Prupe.2G223800_v2.0.a1 Prupe.2G223900_v2.0.a1 Prupe.2G224000_v2.0.a1 Prupe.5G162000_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G291000_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G210400_v2.0.a1 Prupe.7G210600_v2.0.a1 Prupe.7G210700_v2.0.a1 Prupe.7G210800_v2.0.a1 Prupe.7G210900_v2.0.a1 Prupe.8G097600_v2.0.a1 Prupe.8G097800_v2.0.a1 Prupe.8G097800_v2.0.a1
pyrus_communis pycom01g14430 pycom01g14440 pycom01g23130 pycom01g23160 pycom01g23330 pycom02g06210 pycom02g06220 pycom02g06250 pycom02g06270 pycom02g06710 pycom03g05360 pycom03g05380 pycom04g11470 pycom04g11480 pycom04g11520 pycom04g11560 pycom04g11600 pycom04g11610 pycom04g11650 pycom04g11660 pycom04g11670 pycom05g27790 pycom07g17630 pycom08g20960 pycom126g00020 pycom126g00030
rosa_chinensis RchiOBHm_Chr1g0318251 RchiOBHm_Chr1g0318731 RchiOBHm_Chr1g0339101 RchiOBHm_Chr1g0339111 RchiOBHm_Chr1g0347151 RchiOBHm_Chr1g0347161 RchiOBHm_Chr1g0347221 RchiOBHm_Chr1g0352401 RchiOBHm_Chr1g0352441 RchiOBHm_Chr1g0352461 RchiOBHm_Chr1g0356131 RchiOBHm_Chr1g0363991 RchiOBHm_Chr1g0364791 RchiOBHm_Chr1g0364801 RchiOBHm_Chr1g0364811 RchiOBHm_Chr1g0364851 RchiOBHm_Chr1g0364951 RchiOBHm_Chr1g0370821 RchiOBHm_Chr1g0381221 RchiOBHm_Chr1g0381231 RchiOBHm_Chr1g0381261 RchiOBHm_Chr1g0381271 RchiOBHm_Chr1g0381341 RchiOBHm_Chr1g0381351 RchiOBHm_Chr1g0381391 RchiOBHm_Chr1g0381801 RchiOBHm_Chr1g0381821 RchiOBHm_Chr2g0093241 RchiOBHm_Chr2g0116391 RchiOBHm_Chr3g0466441 RchiOBHm_Chr3g0466631 RchiOBHm_Chr3g0466651 RchiOBHm_Chr3g0496921 RchiOBHm_Chr4g0400441 RchiOBHm_Chr4g0400501 RchiOBHm_Chr4g0400511 RchiOBHm_Chr4g0400691 RchiOBHm_Chr4g0400701 RchiOBHm_Chr4g0404331 RchiOBHm_Chr5g0052101 RchiOBHm_Chr5g0052111 RchiOBHm_Chr5g0052171 RchiOBHm_Chr5g0052181 RchiOBHm_Chr6g0264161 RchiOBHm_Chr6g0265551 RchiOBHm_Chr7g0213571 RchiOBHm_Chr7g0213581
rosa_laevigata RLG00000002796 RLG00000003261 RLG00000007935 RLG00000007936 RLG00000009187 RLG00000014179 RLG00000016381 RLG00000018265 RLG00000024558 RLG00000024574 RLG00000026232 RLG00000026234 RLG00000026236 RLG00000026237 RLG00000027459 RLG00000027461 RLG00000027463 RLG00000027530 RLG00000028103 RLG00000028304 RLG00000028333 RLG00000029214 RLG00000029848 RLG00000029951 RLG00000030115 RLG00000030552 RLG00000033668 RLG00000034840 RLG00000034841 RLG00000034842 RLG00000035830
rosa_multiflora Rmu_sc0000654.1_g000004 Rmu_sc0000675.1_g000025 Rmu_sc0001075.1_g000002 Rmu_sc0001726.1_g000004 Rmu_sc0001772.1_g000061 Rmu_sc0001772.1_g000065 Rmu_sc0002067.1_g000002 Rmu_sc0002183.1_g000001 Rmu_sc0002183.1_g000006 Rmu_sc0002244.1_g000003 Rmu_sc0002313.1_g000004 Rmu_sc0002319.1_g000004 Rmu_sc0002539.1_g000085 Rmu_sc0002636.1_g000004 Rmu_sc0003229.1_g000007 Rmu_sc0003313.1_g000020 Rmu_sc0003546.1_g000007 Rmu_sc0003724.1_g000015 Rmu_sc0003936.1_g000029 Rmu_sc0004191.1_g000067 Rmu_sc0004525.1_g000012 Rmu_sc0005122.1_g000009 Rmu_sc0005255.1_g000040 Rmu_sc0005338.1_g000016 Rmu_sc0005584.1_g000008 Rmu_sc0006460.1_g000013 Rmu_sc0006872.1_g000011 Rmu_sc0006872.1_g000015 Rmu_sc0006872.1_g000016 Rmu_sc0006952.1_g000013 Rmu_sc0007342.1_g000005 Rmu_sc0007342.1_g000006 Rmu_sc0008418.1_g000003 Rmu_sc0008418.1_g000006 Rmu_sc0008636.1_g000007 Rmu_sc0008636.1_g000008 Rmu_sc0009205.1_g000014 Rmu_sc0009365.1_g000014 Rmu_sc0009917.1_g000002 Rmu_sc0019289.1_g000003 Rmu_ssc0000098.1_g000011 Rmu_ssc0000098.1_g000012 Rmu_ssc0000167.1_g000018 Rmu_ssc0000167.1_g000024 Rmu_ssc0000326.1_g000015
rosa_roxburghii Rroxscaffold_166G00440780 Rroxscaffold_176G00431500 Rroxscaffold_1G00015080 Rroxscaffold_1G00027880 Rroxscaffold_1G00027890 Rroxscaffold_1G00027920 Rroxscaffold_2G00127250 Rroxscaffold_2G00148380 Rroxscaffold_3G00219450 Rroxscaffold_3G00232170 Rroxscaffold_3G00232210 Rroxscaffold_3G00242230 Rroxscaffold_3G00242240 Rroxscaffold_3G00244790 Rroxscaffold_3G00245790 Rroxscaffold_4G00278400 Rroxscaffold_4G00278430 Rroxscaffold_4G00278670 Rroxscaffold_4G00278680 Rroxscaffold_4G00278690 Rroxscaffold_4G00278700 Rroxscaffold_4G00278720 Rroxscaffold_4G00291690 Rroxscaffold_4G00292070 Rroxscaffold_4G00292090 Rroxscaffold_4G00292770 Rroxscaffold_4G00302240 Rroxscaffold_4G00302860 Rroxscaffold_4G00311320 Rroxscaffold_4G00311330 Rroxscaffold_4G00320570 Rroxscaffold_4G00322050 Rroxscaffold_4G00329480 Rroxscaffold_4G00329730 Rroxscaffold_5G00345500 Rroxscaffold_5G00345510 Rroxscaffold_5G00360830 Rroxscaffold_5G00360840 Rroxscaffold_6G00393450 Rroxscaffold_6G00404030 Rroxscaffold_6G00414220 Rroxscaffold_6G00414230 Rroxscaffold_6G00414280 Rroxscaffold_6G00414290 Rroxscaffold_6G00414350 Rroxscaffold_6G00414470 Rroxscaffold_7G00202570 Rroxscaffold_7G00203460 Rroxscaffold_7G00203470
rosa_rugosa Rorug01G0020500 Rorug01G0020600 Rorug01G0020700 Rorug01G0143700.1 Rorug01G0225700 Rorug01G0228500 Rorug01G0228600 Rorug01G0228600 Rorug01G0228700 Rorug01G0228800 Rorug01G0228800 Rorug01G0229000 Rorug01G0229300 Rorug01G0229400 Rorug01G0229600 Rorug01G0229700 Rorug01G0232200 Rorug01G0232600 Rorug01G0232600 Rorug01G0311900 Rorug01G0311900 Rorug01G0318400 Rorug01G0318500 Rorug01G0318500 Rorug01G0318500 Rorug01G0427900 Rorug01G0427900 Rorug01G0428000 Rorug01G0428200 Rorug01G0428300 Rorug01G0428400 Rorug01G0431500 Rorug01G0431600 Rorug01G0431600 Rorug02G0033800 Rorug02G0206300 Rorug03G0081900 Rorug03G0083200 Rorug03G0083200 Rorug03G0083300 Rorug04G0025100 Rorug04G0025100 Rorug04G0025200 Rorug04G0025300 Rorug04G0058600 Rorug04G0058700 Rorug04G0058800 Rorug04G0098400 Rorug04G0098500 Rorug05G0274500 Rorug05G0274600 Rorug05G0274800 Rorug06G0008500 Rorug06G0009100 Rorug06G0018000
rosa_samantha Rh1AG031700 Rh1AG036100 Rh1AG089800 Rh1AG239800 Rh1AG239900 Rh1AG242000 Rh1AG242300 Rh1AG245600 Rh1AG262600 Rh1AG319700 Rh1AG319800 Rh1AG319900 Rh1AG327200 Rh1AG451100 Rh1AG451200 Rh1AG451300 Rh1AG451600 Rh1AG451700 Rh1BG027200 Rh1BG071600 Rh1BG090700 Rh1BG211000 Rh1BG213000 Rh1BG213500 Rh1BG282800 Rh1BG288400 Rh1BG408100 Rh1BG408200 Rh1BG408400 Rh1BG408700 Rh1CG026300 Rh1CG028300 Rh1CG224100 Rh1CG226000 Rh1CG226100 Rh1CG229300 Rh1CG229400 Rh1CG245900 Rh1CG299200 Rh1CG299400 Rh1CG299500 Rh1CG303300 Rh1CG305100 Rh1CG422500 Rh1CG422600 Rh1CG422700 Rh1CG422800 Rh1CG422900 Rh1CG423100 Rh1CG423300 Rh1CG423400 Rh1CG426300 Rh1CG426600 Rh1DG239300 Rh1DG239600 Rh1DG258300 Rh1DG314200 Rh1DG314300 Rh1DG314400 Rh1DG320000 Rh1DG439200 Rh1DG439400 Rh1DG439500 Rh1DG439700 Rh1DG440000 Rh1DG443800 Rh2AG261800 Rh2BG080900 Rh2CG083300 Rh2DG078900 Rh2DG270000 Rh2DG270100 Rh3AG128400 Rh3AG130100 Rh3AG130500 Rh3AG332500 Rh3AG332600 Rh3AG332800 Rh3BG149700 Rh3BG151500 Rh3CG151400 Rh3CG354500 Rh3CG366800 Rh3DG150500 Rh3DG152200 Rh4AG101400 Rh4AG102900 Rh4AG148300 Rh4AG148600 Rh4BG098000 Rh4CG111100 Rh4CG111300 Rh4CG155100 Rh4DG094800 Rh5AG213600 Rh5AG346900 Rh5AG347000 Rh5BG357500 Rh5BG357700 Rh5BG485400 Rh5CG383100 Rh5CG383200 Rh5CG383300 Rh5CG509900 Rh5DG373000 Rh5DG373200 Rh6BG054300 Rh6BG126300 Rh6CG125100 Rh6CG185300 Rh6DG177000 Rh7AG276100 Rh7AG276200 Rh7BG230500 Rh7BG270500 Rh7BG364000 Rh7CG250100 Rh7CG295200 Rh7CG295300 Rh7DG389700
rosa_wichuraiana Rw0G001190 Rw0G010680 Rw0G013360 Rw0G014310 Rw0G014890 Rw0G020310 Rw0G021350 Rw0G022510 Rw1G003360 Rw1G004330 Rw1G006930 Rw1G008310 Rw1G021090 Rw1G021150 Rw1G021210 Rw1G023200 Rw1G023210 Rw1G028340 Rw1G028350 Rw1G028990 Rw1G032510 Rw1G039370 Rw1G039400 Rw1G039410 Rw1G039420 Rw1G039430 Rw2G006700 Rw2G020550 Rw2G020580 Rw3G012130 Rw3G012300 Rw3G012310 Rw3G028220 Rw3G029230 Rw5G021600 Rw5G032790 Rw6G011240 Rw7G027670 Rw7G032780

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 759
Acc36I ACCTGC 1 cut(s) 291
Acc65I GGTACC 1 cut(s) 624
AccB1I GGYRCC 2 cut(s) 624, 1764
AccB7I CCANNNNNTGG 1 cut(s) 120
AciI CCGC 1 cut(s) 523
AclWI GGATC 4 cut(s) 164, 806, 1777, 1790
AcoI YGGCCR 2 cut(s) 11, 192
AcsI RAATTY 3 cut(s) 232, 1183, 1676
AcuI CTGAAG 1 cut(s) 1419
AcyI GRCGYC 2 cut(s) 526, 1765
AfaI GTAC 4 cut(s) 73, 157, 626, 1806
AfiI CCNNNNNNNGG 5 cut(s) 120, 575, 1144, 1558, 1624
AjnI CCWGG 1 cut(s) 709
AluBI AGCT 6 cut(s) 40, 91, 649, 809, 1310, 1407
AluI AGCT 6 cut(s) 40, 91, 649, 809, 1310, 1407
Alw26I GTCTC 2 cut(s) 381, 637
AlwI GGATC 4 cut(s) 164, 806, 1777, 1790
Ama87I CYCGRG 1 cut(s) 546
AoxI GGCC 4 cut(s) 11, 111, 192, 1846
ApeKI GCWGC 4 cut(s) 416, 1193, 1739, 1793
ApoI RAATTY 3 cut(s) 232, 1183, 1676
ArsI GACNNNNNNTTYG 2 cut(s) 1046, 1078
Asp718I GGTACC 1 cut(s) 624
AspLEI GCGC 1 cut(s) 1767
AspS9I GGNCC 2 cut(s) 707, 1847
AsuHPI GGTGA 2 cut(s) 1174, 1496
AvaI CYCGRG 1 cut(s) 546
AvaII GGWCC 1 cut(s) 707
BalI TGGCCA 1 cut(s) 13
BamHI GGATCC 1 cut(s) 1782
BanI GGYRCC 2 cut(s) 624, 1764
BanII GRGCYC 1 cut(s) 919
BbsI GAAGAC 1 cut(s) 154
BbvI GCAGC 4 cut(s) 428, 1205, 1751, 1805
BccI CCATC 4 cut(s) 552, 880, 1776, 1833
BceAI ACGGC 1 cut(s) 207
BciT130I CCWGG 1 cut(s) 711
BciVI GTATCC 1 cut(s) 958
BcoDI GTCTC 2 cut(s) 381, 637
BfaI CTAG 2 cut(s) 453, 704
BfmI CTRYAG 3 cut(s) 322, 1464, 1842
BfoI RGCGCY 1 cut(s) 1768
BfuAI ACCTGC 1 cut(s) 291
BfuI GTATCC 1 cut(s) 958
BglII AGATCT 1 cut(s) 436
BisI GCNGC 5 cut(s) 417, 524, 1194, 1740, 1794
BlsI GCNGC 5 cut(s) 418, 525, 1195, 1741, 1795
Bme1390I CCNGG 1 cut(s) 711
Bme18I GGWCC 1 cut(s) 707
BmeT110I CYCGRG 1 cut(s) 546
BmgT120I GGNCC 2 cut(s) 707, 1847
BmiI GGNNCC 5 cut(s) 616, 626, 1326, 1766, 1784
BmrFI CCNGG 1 cut(s) 711
BmsI GCATC 6 cut(s) 13, 390, 886, 1296, 1431, 1751
BpiI GAAGAC 1 cut(s) 154
BpuEI CTTGAG 1 cut(s) 1489
BsaAI YACGTR 1 cut(s) 44
BsaBI GATNNNNATC 1 cut(s) 1113
BsaHI GRCGYC 2 cut(s) 526, 1765
BsaJI CCNNGG 2 cut(s) 1255, 1480
BsaXI ACNNNNNCTCC 2 cut(s) 1316, 1346
Bsc4I CCNNNNNNNGG 5 cut(s) 120, 575, 1144, 1558, 1624
Bse1I ACTGG 4 cut(s) 901, 1009, 1328, 1862
Bse3DI GCAATG 3 cut(s) 399, 741, 1044
Bse8I GATNNNNATC 1 cut(s) 1113
BseBI CCWGG 1 cut(s) 711
BseDI CCNNGG 2 cut(s) 1255, 1480
BseGI GGATG 7 cut(s) 317, 338, 432, 504, 591, 790, 877
BseJI GATNNNNATC 1 cut(s) 1113
BseLI CCNNNNNNNGG 5 cut(s) 120, 575, 1144, 1558, 1624
BseMI GCAATG 3 cut(s) 399, 741, 1044
BseMII CTCAG 2 cut(s) 1234, 1320
BseNI ACTGG 4 cut(s) 901, 1009, 1328, 1862
BseXI GCAGC 4 cut(s) 428, 1205, 1751, 1805
BsgI GTGCAG 1 cut(s) 1064
BshFI GGCC 4 cut(s) 13, 113, 194, 1848
BshNI GGYRCC 2 cut(s) 624, 1764
BsiHKCI CYCGRG 1 cut(s) 546
BslI CCNNNNNNNGG 5 cut(s) 120, 575, 1144, 1558, 1624
BsmAI GTCTC 2 cut(s) 381, 637
BsmI GAATGC 2 cut(s) 436, 1562
BsnI GGCC 4 cut(s) 13, 113, 194, 1848
BsoBI CYCGRG 1 cut(s) 546
Bsp1286I GDGCHC 1 cut(s) 919
Bsp1407I TGTACA 1 cut(s) 1804
Bsp143I GATC 9 cut(s) 58, 169, 335, 436, 811, 1114, 1197, 1234, 1782
Bsp19I CCATGG 1 cut(s) 1480
BspACI CCGC 1 cut(s) 523
BspANI GGCC 4 cut(s) 13, 113, 194, 1848
BspCNI CTCAG 2 cut(s) 1233, 1319
BspLI GGNNCC 5 cut(s) 616, 626, 1326, 1766, 1784
BspMI ACCTGC 1 cut(s) 291
BspPI GGATC 4 cut(s) 164, 806, 1777, 1790
BspT107I GGYRCC 2 cut(s) 624, 1764
BsrDI GCAATG 3 cut(s) 399, 741, 1044
BsrGI TGTACA 1 cut(s) 1804
BsrI ACTGG 4 cut(s) 901, 1009, 1328, 1862
BssECI CCNNGG 2 cut(s) 1255, 1480
BssMI GATC 9 cut(s) 58, 169, 335, 436, 811, 1114, 1197, 1234, 1782
BssNI GRCGYC 2 cut(s) 526, 1765
BssT1I CCWWGG 2 cut(s) 1255, 1480
Bst2UI CCWGG 1 cut(s) 711
Bst4CI ACNGT 6 cut(s) 79, 160, 1017, 1232, 1465, 1817
Bst6I CTCTTC 2 cut(s) 1307, 1655
BstACI GRCGYC 2 cut(s) 526, 1765
BstAUI TGTACA 1 cut(s) 1804
BstBAI YACGTR 1 cut(s) 44
BstC8I GCNNGC 1 cut(s) 832
BstDEI CTNAG 6 cut(s) 303, 357, 920, 1143, 1220, 1306
BstDSI CCRYGG 1 cut(s) 1480
BstEII GGTNACC 1 cut(s) 1162
BstF5I GGATG 7 cut(s) 317, 338, 432, 504, 591, 790, 877
BstH2I RGCGCY 1 cut(s) 1768
BstHHI GCGC 1 cut(s) 1767
BstKTI GATC 9 cut(s) 61, 172, 338, 439, 814, 1117, 1200, 1237, 1785
BstMAI GTCTC 2 cut(s) 381, 637
BstMBI GATC 9 cut(s) 58, 169, 335, 436, 811, 1114, 1197, 1234, 1782
BstMWI GCNNNNNNNGC 3 cut(s) 827, 1646, 1729
BstNI CCWGG 1 cut(s) 711
BstNSI RCATGY 1 cut(s) 156
BstPI GGTNACC 1 cut(s) 1162
BstSCI CCNGG 1 cut(s) 709
BstSFI CTRYAG 3 cut(s) 322, 1464, 1842
BstSNI TACGTA 1 cut(s) 44
BstV1I GCAGC 4 cut(s) 428, 1205, 1751, 1805
BstV2I GAAGAC 1 cut(s) 154
BstX2I RGATCY 2 cut(s) 436, 1782
BstXI CCANNNNNNTGG 1 cut(s) 1857
BstYI RGATCY 2 cut(s) 436, 1782
BsuI GTATCC 1 cut(s) 958
BsuRI GGCC 4 cut(s) 13, 113, 194, 1848
BtgI CCRYGG 1 cut(s) 1480
BtgZI GCGATG 3 cut(s) 667, 858, 1557
BtsCI GGATG 7 cut(s) 317, 338, 432, 504, 591, 790, 877
BtsI GCAGTG 3 cut(s) 33, 1501, 1730
BveI ACCTGC 1 cut(s) 291
Cac8I GCNNGC 1 cut(s) 832
CfoI GCGC 1 cut(s) 1767
Cfr13I GGNCC 2 cut(s) 707, 1847
CseI GACGC 3 cut(s) 515, 836, 1785
Csp6I GTAC 4 cut(s) 72, 156, 625, 1805
CviAII CATG 8 cut(s) 147, 153, 348, 509, 1009, 1201, 1291, 1481
CviQI GTAC 4 cut(s) 72, 156, 625, 1805
DdeI CTNAG 6 cut(s) 303, 357, 920, 1143, 1220, 1306
DinI GGCGCC 1 cut(s) 1766
DpnI GATC 9 cut(s) 60, 171, 337, 438, 813, 1116, 1199, 1236, 1784
DpnII GATC 9 cut(s) 58, 169, 335, 436, 811, 1114, 1197, 1234, 1782
DraI TTTAAA 2 cut(s) 1188, 1675
EaeI YGGCCR 2 cut(s) 11, 192
Eam1104I CTCTTC 2 cut(s) 1307, 1655
EarI CTCTTC 2 cut(s) 1307, 1655
Eco105I TACGTA 1 cut(s) 44
Eco130I CCWWGG 2 cut(s) 1255, 1480
Eco24I GRGCYC 1 cut(s) 919
Eco32I GATATC 2 cut(s) 716, 996
Eco47I GGWCC 1 cut(s) 707
Eco57I CTGAAG 1 cut(s) 1419
Eco88I CYCGRG 1 cut(s) 546
Eco91I GGTNACC 1 cut(s) 1162
EcoO65I GGTNACC 1 cut(s) 1162
EcoRII CCWGG 1 cut(s) 709
EcoRV GATATC 2 cut(s) 716, 996
EcoT14I CCWWGG 2 cut(s) 1255, 1480
EcoT22I ATGCAT 1 cut(s) 490
EcoT38I GRGCYC 1 cut(s) 919
EgeI GGCGCC 1 cut(s) 1766
EheI GGCGCC 1 cut(s) 1766
ErhI CCWWGG 2 cut(s) 1255, 1480
FaeI CATG 8 cut(s) 150, 156, 351, 512, 1012, 1204, 1294, 1484
FalI AAGNNNNNCTT 2 cut(s) 1430, 1462
FatI CATG 8 cut(s) 146, 152, 347, 508, 1008, 1200, 1290, 1480
Fnu4HI GCNGC 5 cut(s) 417, 524, 1194, 1740, 1794
FokI GGATG 7 cut(s) 324, 325, 439, 491, 578, 797, 864
FriOI GRGCYC 1 cut(s) 919
Fsp4HI GCNGC 5 cut(s) 417, 524, 1194, 1740, 1794
FspBI CTAG 2 cut(s) 453, 704
GlaI GCGC 1 cut(s) 1766
GluI GCNGC 5 cut(s) 417, 524, 1194, 1740, 1794
HaeII RGCGCY 1 cut(s) 1768
HaeIII GGCC 4 cut(s) 13, 113, 194, 1848
HgaI GACGC 3 cut(s) 515, 836, 1785
HhaI GCGC 1 cut(s) 1767
Hin1I GRCGYC 2 cut(s) 526, 1765
Hin1II CATG 8 cut(s) 150, 156, 351, 512, 1012, 1204, 1294, 1484
Hin6I GCGC 1 cut(s) 1765
HinP1I GCGC 1 cut(s) 1765
HincII GTYRAC 1 cut(s) 1373
HindII GTYRAC 1 cut(s) 1373
HinfI GANTC 3 cut(s) 739, 1049, 1499
HphI GGTGA 2 cut(s) 1174, 1496
Hpy166II GTNNAC 1 cut(s) 1373
Hpy188I TCNGA 4 cut(s) 642, 720, 1223, 1585
Hpy188III TCNNGA 4 cut(s) 50, 220, 1238, 1597
Hpy8I GTNNAC 1 cut(s) 1373
Hpy99I CGWCG 3 cut(s) 670, 830, 1616
HpyAV CCTTC 4 cut(s) 598, 628, 1315, 1415
HpyCH4III ACNGT 6 cut(s) 79, 160, 1017, 1232, 1465, 1817
HpyCH4IV ACGT 2 cut(s) 43, 968
HpyF10VI GCNNNNNNNGC 3 cut(s) 827, 1646, 1729
HpyF3I CTNAG 6 cut(s) 303, 357, 920, 1143, 1220, 1306
HpySE526I ACGT 2 cut(s) 43, 968
Hsp92I GRCGYC 2 cut(s) 526, 1765
Hsp92II CATG 8 cut(s) 150, 156, 351, 512, 1012, 1204, 1294, 1484
HspAI GCGC 1 cut(s) 1765
KasI GGCGCC 1 cut(s) 1764
KpnI GGTACC 1 cut(s) 628
Kzo9I GATC 9 cut(s) 58, 169, 335, 436, 811, 1114, 1197, 1234, 1782
LmnI GCTCC 3 cut(s) 614, 1324, 1720
Lsp1109I GCAGC 4 cut(s) 428, 1205, 1751, 1805
LweI GCATC 6 cut(s) 13, 390, 886, 1296, 1431, 1751
MaeI CTAG 2 cut(s) 453, 704
MaeII ACGT 2 cut(s) 43, 968
MaeIII GTNAC 2 cut(s) 1162, 1468
MalI GATC 9 cut(s) 60, 171, 337, 438, 813, 1116, 1199, 1236, 1784
MboI GATC 9 cut(s) 58, 169, 335, 436, 811, 1114, 1197, 1234, 1782
MfeI CAATTG 3 cut(s) 33, 1094, 1715
MflI RGATCY 2 cut(s) 436, 1782
MhlI GDGCHC 1 cut(s) 919
MlsI TGGCCA 1 cut(s) 13
MluNI TGGCCA 1 cut(s) 13
Mly113I GGCGCC 1 cut(s) 1765
MlyI GAGTC 1 cut(s) 1058
MmeI TCCRAC 2 cut(s) 743, 951
MnlI CCTC 8 cut(s) 56, 75, 320, 891, 1150, 1513, 1720, 1832
Mox20I TGGCCA 1 cut(s) 13
Mph1103I ATGCAT 1 cut(s) 490
MscI TGGCCA 1 cut(s) 13
MseI TTAA 4 cut(s) 518, 552, 1187, 1674
MslI CAYNNNNRTG 3 cut(s) 151, 727, 1830
Msp20I TGGCCA 1 cut(s) 13
MspR9I CCNGG 1 cut(s) 711
MunI CAATTG 3 cut(s) 33, 1094, 1715
Mva1269I GAATGC 2 cut(s) 436, 1562
MvaI CCWGG 1 cut(s) 711
MwoI GCNNNNNNNGC 3 cut(s) 827, 1646, 1729
NarI GGCGCC 1 cut(s) 1765
NcoI CCATGG 1 cut(s) 1480
NdeII GATC 9 cut(s) 58, 169, 335, 436, 811, 1114, 1197, 1234, 1782
NlaIII CATG 8 cut(s) 150, 156, 351, 512, 1012, 1204, 1294, 1484
NlaIV GGNNCC 5 cut(s) 616, 626, 1326, 1766, 1784
NmuCI GTSAC 1 cut(s) 1162
NsiI ATGCAT 1 cut(s) 490
NspI RCATGY 1 cut(s) 156
PctI GAATGC 2 cut(s) 436, 1562
PfeI GAWTC 2 cut(s) 739, 1499
PflMI CCANNNNNTGG 1 cut(s) 120
PfoI TCCNGGA 1 cut(s) 709
PkrI GCNGC 5 cut(s) 418, 525, 1195, 1741, 1795
PleI GAGTC 1 cut(s) 1057
PluTI GGCGCC 1 cut(s) 1768
PpsI GAGTC 1 cut(s) 1057
Ppu21I YACGTR 1 cut(s) 44
PsiI TTATAA 1 cut(s) 759
Psp6I CCWGG 1 cut(s) 709
PspEI GGTNACC 1 cut(s) 1162
PspGI CCWGG 1 cut(s) 709
PspN4I GGNNCC 5 cut(s) 616, 626, 1326, 1766, 1784
PspPI GGNCC 2 cut(s) 707, 1847
PsuI RGATCY 2 cut(s) 436, 1782
RsaI GTAC 4 cut(s) 73, 157, 626, 1806
RsaNI GTAC 4 cut(s) 72, 156, 625, 1805
RseI CAYNNNNRTG 3 cut(s) 151, 727, 1830
SaqAI TTAA 4 cut(s) 518, 552, 1187, 1674
SatI GCNGC 5 cut(s) 417, 524, 1194, 1740, 1794
Sau3AI GATC 9 cut(s) 58, 169, 335, 436, 811, 1114, 1197, 1234, 1782
Sau96I GGNCC 2 cut(s) 707, 1847
SchI GAGTC 1 cut(s) 1058
ScrFI CCNGG 1 cut(s) 711
SduI GDGCHC 1 cut(s) 919
SfaNI GCATC 6 cut(s) 13, 390, 886, 1296, 1431, 1751
SfcI CTRYAG 3 cut(s) 322, 1464, 1842
SfoI GGCGCC 1 cut(s) 1766
SinI GGWCC 1 cut(s) 707
SmiMI CAYNNNNRTG 3 cut(s) 151, 727, 1830
SmlI CTYRAG 1 cut(s) 1504
SmoI CTYRAG 1 cut(s) 1504
SnaBI TACGTA 1 cut(s) 44
SsiI CCGC 1 cut(s) 523
SspDI GGCGCC 1 cut(s) 1764
SspI AATATT 1 cut(s) 897
SspMI CTAG 2 cut(s) 453, 704
StyD4I CCNGG 1 cut(s) 709
StyI CCWWGG 2 cut(s) 1255, 1480
TaaI ACNGT 6 cut(s) 79, 160, 1017, 1232, 1465, 1817
TaiI ACGT 2 cut(s) 46, 971
TaqI TCGA 9 cut(s) 51, 61, 259, 665, 694, 825, 1052, 1113, 1598
TatI WGTACW 2 cut(s) 71, 1804
TauI GCSGC 1 cut(s) 526
TfiI GAWTC 2 cut(s) 739, 1499
Tru1I TTAA 4 cut(s) 518, 552, 1187, 1674
Tru9I TTAA 4 cut(s) 518, 552, 1187, 1674
TseFI GTSAC 1 cut(s) 1162
TseI GCWGC 4 cut(s) 416, 1193, 1739, 1793
Tsp45I GTSAC 1 cut(s) 1162
TspGWI ACGGA 2 cut(s) 508, 1775
Van91I CCANNNNNTGG 1 cut(s) 120
VpaK11BI GGWCC 1 cut(s) 707
XapI RAATTY 3 cut(s) 232, 1183, 1676
XceI RCATGY 1 cut(s) 156
XcmI CCANNNNNNNNNTGG 1 cut(s) 25
XspI CTAG 2 cut(s) 453, 704
Zsp2I ATGCAT 1 cut(s) 490
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.