FvH4_7g13270

Cyclic nucleotide-gated ion channel 1-like

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
Physical Location & Seq
Forward (+)
11930273 .. 11934516
4244 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g13270.t1

Sequence Viewer

Length: 1752 bp
ATGGAGCAAGCCAATGATATTGAGCAAGGGGATGGAGGACATAAGAGTACAATTACTACAAAAGAGCTAGAAGAAACTCTTAAAAAGCATAATGAGCCAAGAAATAGATGGAATGCAATCTTTACAATATCATGTGCAATTGCAATCTTCATTGATCCTTTGTACTGTTACGCTCCTGTGATCCACGGCAAGTGCTTGGAACTGCACCAACGTTTGATGTGGACGTATATTGGTTTACGATTAGCCGTCGATGTCTTTTACGCAATCGACCTGGGTAAATGGTGGTCCCGAAGTAAGAAGACAAAAGTTCTATATCTCATTTTGGTTTCGCTTCCCCTGCCAGAGGGACTGTTACTCTCCTCTATATGCTCGGAATTACTATTATATACCTGGGATCCTACTTATGCTCTTATAATCACGACTCCAATCCAATATTCCTTACGAATTTATCACATGTACGTATCCTTGAGGCGGCGACGTCCTATCTTTAAGTCTGGAATGGGAAAATGGCTTACAGCTGTAATGGATTACCTTCCCTTCGTCCTTGCTTCTCATCTATTTGGAGCTTTATGGTATCGTCTTGCTGTTCAGCGACAGATAGATTGTTGGAAGTCACATTGTGAAAAGCTCCTCCTGCCGGTCACTAAGCAATGTAAATCTATAAGCAGTCGAGATTTTTTCTGTAAAACGATGTCCTCATTGAACACCAGCGATATCTCTATATGGGATAAATTATGTCATCCGGTTAAAGAAGCAAATCCAGAAGCCTTTGATTTTGGTATATATCTCCACGCTCTTCAGTCTAATGTGACAAGTTCAACACATGCCGTGAAAAGAATTTCTCAATCTTTTTGGTGGGCACTTCGAAATCTGAGTTCCTTTGGTTCAAACCTCCAGACTAGTCTGTATACAATGGAAATCTTCTTGTCTGTGTTGATATCTATAAGTGGCATGGCGTTATTTTTAGTATATCTAAATGCACGGGTACAGGAGTCACAAAAGATACTAATGGAGTCTAAATCAAAAAAGAAGACGCAGTTGCTGAAACCAGATATAGATCTATGGTTATACAAAAATAACATCCGATTTCAAAAAGATAACATCCAAGAGGATGAGGATCTGAAGAGACTCAAGAAAGCCATCATGGAAAACATACACAAACTTGGAGAAAACAATGATATCGATTTGCAAAACATGCTCTCTATTCTTCCCGTAAATGACAAAAAAAGAATCATCCGGTTGCTCTGTTTGGATTCACTAAAGAAAGTGCCTATACTTGAAAATATTCGTGAAAATGTTTTGATAGCAATCTGTCAGCATCTTAAGCCAGTGACATACACTGAAGACAACTACATTGTTCAAGAGGGGAGACCACTTGGAAAGATGATCTTCATCATGCAAGGTCTTGCATGGACTTACACAGCCAGTAACATAATCGGCGAAACGTTAAAGAGAGGCGATTTTTACGGAGAAGAAGTTTTAACTTGGGCATTCCAATCTCTCTCCTTTTCTGGTTTACCCATCTCAACAAGATCTGTTATGTCTCAAGGAAAAATCGAAGCCTTTGCTATCAAAGCCGATCACTTGAAGAGTGTTGTATATAAGTTTTGGTGGCATTTTAGGAAAGAGGTAGGTGTTTCACAGTTGGAGCTCTGGGAGCATTTGGCAGCGTCTTCCATACAAGCTGCTTGGCGCCTCCGTAATGCAAAATCTAAACCCTTGTCTAAGTGGTACAAGATTCCTTATCCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

584

Amino Acids

67.55

Weight (kDa)

9.3

Isoelectric Point (pI)

48.0

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000017)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07351 FvH4_1g11800 FvH4_1g11800 FvH4_1g11800 FvH4_1g11800 FvH4_1g11800 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_4g14360 FvH4_6g13561 FvH4_6g13562 FvH4_6g13580 FvH4_6g13590 FvH4_6g13590 FvH4_6g13590 FvH4_6g13731 FvH4_6g13770 FvH4_6g13800 FvH4_6g13800 FvH4_6g13860 FvH4_6g13870 FvH4_6g13870 FvH4_6g13870 FvH4_6g13870 FvH4_6g13870 FvH4_6g13890 FvH4_6g33801 FvH4_7g13020 FvH4_7g13270 FvH4_7g13270 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g14580 FvH4_7g14580 FvH4_7g14580 FvH4_7g14600 FvH4_7g14600 FvH4_7g20030 FvH4_7g20510 FvH4_7g20510 FvH4_7g20510 FvH4_7g20670 FvH4_7g20670 FvH4_7g20670 FvH4_7g20670 FvH4_7g20690 FvH4_7g20690 FvH4_7g31930 FvH4_7g31930 FvH4_7g31940 FvH4_7g31940
malus_domestica MD01G1115700.v1.1 MD01G1115800.v1.1 MD01G1116600.v1.1 MD01G1116700.v1.1 MD01G1117000.v1.1 MD01G1225000.v1.1 MD02G1077900.v1.1 MD02G1078000.v1.1 MD02G1078200.v1.1 MD02G1078400.v1.1 MD02G1084300.v1.1 MD04G1004700.v1.1 MD04G1123100.v1.1 MD04G1123200.v1.1 MD04G1128000.v1.1 MD04G1128400.v1.1 MD05G1299700.v1.1 MD05G1300000.v1.1 MD07G1184000.v1.1 MD07G1292300.v1.1 MD08G1214800.v1.1
prunus_persica Prupe.1G205100_v2.0.a1 Prupe.1G205100_v2.0.a1 Prupe.1G205200_v2.0.a1 Prupe.2G222300_v2.0.a1 Prupe.2G223300_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223600_v2.0.a1 Prupe.2G223600_v2.0.a1 Prupe.2G223600_v2.0.a1 Prupe.2G223700_v2.0.a1 Prupe.2G223700_v2.0.a1 Prupe.2G223700_v2.0.a1 Prupe.2G223700_v2.0.a1 Prupe.2G223800_v2.0.a1 Prupe.2G223900_v2.0.a1 Prupe.2G224000_v2.0.a1 Prupe.5G162000_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G291000_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G210400_v2.0.a1 Prupe.7G210600_v2.0.a1 Prupe.7G210700_v2.0.a1 Prupe.7G210800_v2.0.a1 Prupe.7G210900_v2.0.a1 Prupe.8G097600_v2.0.a1 Prupe.8G097800_v2.0.a1 Prupe.8G097800_v2.0.a1
pyrus_communis pycom01g14430 pycom01g14440 pycom01g23130 pycom01g23160 pycom01g23330 pycom02g06210 pycom02g06220 pycom02g06250 pycom02g06270 pycom02g06710 pycom03g05360 pycom03g05380 pycom04g11470 pycom04g11480 pycom04g11520 pycom04g11560 pycom04g11600 pycom04g11610 pycom04g11650 pycom04g11660 pycom04g11670 pycom05g27790 pycom07g17630 pycom08g20960 pycom126g00020 pycom126g00030
rosa_chinensis RchiOBHm_Chr1g0318251 RchiOBHm_Chr1g0318731 RchiOBHm_Chr1g0339101 RchiOBHm_Chr1g0339111 RchiOBHm_Chr1g0347151 RchiOBHm_Chr1g0347161 RchiOBHm_Chr1g0347221 RchiOBHm_Chr1g0352401 RchiOBHm_Chr1g0352441 RchiOBHm_Chr1g0352461 RchiOBHm_Chr1g0356131 RchiOBHm_Chr1g0363991 RchiOBHm_Chr1g0364791 RchiOBHm_Chr1g0364801 RchiOBHm_Chr1g0364811 RchiOBHm_Chr1g0364851 RchiOBHm_Chr1g0364951 RchiOBHm_Chr1g0370821 RchiOBHm_Chr1g0381221 RchiOBHm_Chr1g0381231 RchiOBHm_Chr1g0381261 RchiOBHm_Chr1g0381271 RchiOBHm_Chr1g0381341 RchiOBHm_Chr1g0381351 RchiOBHm_Chr1g0381391 RchiOBHm_Chr1g0381801 RchiOBHm_Chr1g0381821 RchiOBHm_Chr2g0093241 RchiOBHm_Chr2g0116391 RchiOBHm_Chr3g0466441 RchiOBHm_Chr3g0466631 RchiOBHm_Chr3g0466651 RchiOBHm_Chr3g0496921 RchiOBHm_Chr4g0400441 RchiOBHm_Chr4g0400501 RchiOBHm_Chr4g0400511 RchiOBHm_Chr4g0400691 RchiOBHm_Chr4g0400701 RchiOBHm_Chr4g0404331 RchiOBHm_Chr5g0052101 RchiOBHm_Chr5g0052111 RchiOBHm_Chr5g0052171 RchiOBHm_Chr5g0052181 RchiOBHm_Chr6g0264161 RchiOBHm_Chr6g0265551 RchiOBHm_Chr7g0213571 RchiOBHm_Chr7g0213581
rosa_laevigata RLG00000002796 RLG00000003261 RLG00000007935 RLG00000007936 RLG00000009187 RLG00000014179 RLG00000016381 RLG00000018265 RLG00000024558 RLG00000024574 RLG00000026232 RLG00000026234 RLG00000026236 RLG00000026237 RLG00000027459 RLG00000027461 RLG00000027463 RLG00000027530 RLG00000028103 RLG00000028304 RLG00000028333 RLG00000029214 RLG00000029848 RLG00000029951 RLG00000030115 RLG00000030552 RLG00000033668 RLG00000034840 RLG00000034841 RLG00000034842 RLG00000035830
rosa_multiflora Rmu_sc0000654.1_g000004 Rmu_sc0000675.1_g000025 Rmu_sc0001075.1_g000002 Rmu_sc0001726.1_g000004 Rmu_sc0001772.1_g000061 Rmu_sc0001772.1_g000065 Rmu_sc0002067.1_g000002 Rmu_sc0002183.1_g000001 Rmu_sc0002183.1_g000006 Rmu_sc0002244.1_g000003 Rmu_sc0002313.1_g000004 Rmu_sc0002319.1_g000004 Rmu_sc0002539.1_g000085 Rmu_sc0002636.1_g000004 Rmu_sc0003229.1_g000007 Rmu_sc0003313.1_g000020 Rmu_sc0003546.1_g000007 Rmu_sc0003724.1_g000015 Rmu_sc0003936.1_g000029 Rmu_sc0004191.1_g000067 Rmu_sc0004525.1_g000012 Rmu_sc0005122.1_g000009 Rmu_sc0005255.1_g000040 Rmu_sc0005338.1_g000016 Rmu_sc0005584.1_g000008 Rmu_sc0006460.1_g000013 Rmu_sc0006872.1_g000011 Rmu_sc0006872.1_g000015 Rmu_sc0006872.1_g000016 Rmu_sc0006952.1_g000013 Rmu_sc0007342.1_g000005 Rmu_sc0007342.1_g000006 Rmu_sc0008418.1_g000003 Rmu_sc0008418.1_g000006 Rmu_sc0008636.1_g000007 Rmu_sc0008636.1_g000008 Rmu_sc0009205.1_g000014 Rmu_sc0009365.1_g000014 Rmu_sc0009917.1_g000002 Rmu_sc0019289.1_g000003 Rmu_ssc0000098.1_g000011 Rmu_ssc0000098.1_g000012 Rmu_ssc0000167.1_g000018 Rmu_ssc0000167.1_g000024 Rmu_ssc0000326.1_g000015
rosa_roxburghii Rroxscaffold_166G00440780 Rroxscaffold_176G00431500 Rroxscaffold_1G00015080 Rroxscaffold_1G00027880 Rroxscaffold_1G00027890 Rroxscaffold_1G00027920 Rroxscaffold_2G00127250 Rroxscaffold_2G00148380 Rroxscaffold_3G00219450 Rroxscaffold_3G00232170 Rroxscaffold_3G00232210 Rroxscaffold_3G00242230 Rroxscaffold_3G00242240 Rroxscaffold_3G00244790 Rroxscaffold_3G00245790 Rroxscaffold_4G00278400 Rroxscaffold_4G00278430 Rroxscaffold_4G00278670 Rroxscaffold_4G00278680 Rroxscaffold_4G00278690 Rroxscaffold_4G00278700 Rroxscaffold_4G00278720 Rroxscaffold_4G00291690 Rroxscaffold_4G00292070 Rroxscaffold_4G00292090 Rroxscaffold_4G00292770 Rroxscaffold_4G00302240 Rroxscaffold_4G00302860 Rroxscaffold_4G00311320 Rroxscaffold_4G00311330 Rroxscaffold_4G00320570 Rroxscaffold_4G00322050 Rroxscaffold_4G00329480 Rroxscaffold_4G00329730 Rroxscaffold_5G00345500 Rroxscaffold_5G00345510 Rroxscaffold_5G00360830 Rroxscaffold_5G00360840 Rroxscaffold_6G00393450 Rroxscaffold_6G00404030 Rroxscaffold_6G00414220 Rroxscaffold_6G00414230 Rroxscaffold_6G00414280 Rroxscaffold_6G00414290 Rroxscaffold_6G00414350 Rroxscaffold_6G00414470 Rroxscaffold_7G00202570 Rroxscaffold_7G00203460 Rroxscaffold_7G00203470
rosa_rugosa Rorug01G0020500 Rorug01G0020600 Rorug01G0020700 Rorug01G0143700.1 Rorug01G0225700 Rorug01G0228500 Rorug01G0228600 Rorug01G0228600 Rorug01G0228700 Rorug01G0228800 Rorug01G0228800 Rorug01G0229000 Rorug01G0229300 Rorug01G0229400 Rorug01G0229600 Rorug01G0229700 Rorug01G0232200 Rorug01G0232600 Rorug01G0232600 Rorug01G0311900 Rorug01G0311900 Rorug01G0318400 Rorug01G0318500 Rorug01G0318500 Rorug01G0318500 Rorug01G0427900 Rorug01G0427900 Rorug01G0428000 Rorug01G0428200 Rorug01G0428300 Rorug01G0428400 Rorug01G0431500 Rorug01G0431600 Rorug01G0431600 Rorug02G0033800 Rorug02G0206300 Rorug03G0081900 Rorug03G0083200 Rorug03G0083200 Rorug03G0083300 Rorug04G0025100 Rorug04G0025100 Rorug04G0025200 Rorug04G0025300 Rorug04G0058600 Rorug04G0058700 Rorug04G0058800 Rorug04G0098400 Rorug04G0098500 Rorug05G0274500 Rorug05G0274600 Rorug05G0274800 Rorug06G0008500 Rorug06G0009100 Rorug06G0018000
rosa_samantha Rh1AG031700 Rh1AG036100 Rh1AG089800 Rh1AG239800 Rh1AG239900 Rh1AG242000 Rh1AG242300 Rh1AG245600 Rh1AG262600 Rh1AG319700 Rh1AG319800 Rh1AG319900 Rh1AG327200 Rh1AG451100 Rh1AG451200 Rh1AG451300 Rh1AG451600 Rh1AG451700 Rh1BG027200 Rh1BG071600 Rh1BG090700 Rh1BG211000 Rh1BG213000 Rh1BG213500 Rh1BG282800 Rh1BG288400 Rh1BG408100 Rh1BG408200 Rh1BG408400 Rh1BG408700 Rh1CG026300 Rh1CG028300 Rh1CG224100 Rh1CG226000 Rh1CG226100 Rh1CG229300 Rh1CG229400 Rh1CG245900 Rh1CG299200 Rh1CG299400 Rh1CG299500 Rh1CG303300 Rh1CG305100 Rh1CG422500 Rh1CG422600 Rh1CG422700 Rh1CG422800 Rh1CG422900 Rh1CG423100 Rh1CG423300 Rh1CG423400 Rh1CG426300 Rh1CG426600 Rh1DG239300 Rh1DG239600 Rh1DG258300 Rh1DG314200 Rh1DG314300 Rh1DG314400 Rh1DG320000 Rh1DG439200 Rh1DG439400 Rh1DG439500 Rh1DG439700 Rh1DG440000 Rh1DG443800 Rh2AG261800 Rh2BG080900 Rh2CG083300 Rh2DG078900 Rh2DG270000 Rh2DG270100 Rh3AG128400 Rh3AG130100 Rh3AG130500 Rh3AG332500 Rh3AG332600 Rh3AG332800 Rh3BG149700 Rh3BG151500 Rh3CG151400 Rh3CG354500 Rh3CG366800 Rh3DG150500 Rh3DG152200 Rh4AG101400 Rh4AG102900 Rh4AG148300 Rh4AG148600 Rh4BG098000 Rh4CG111100 Rh4CG111300 Rh4CG155100 Rh4DG094800 Rh5AG213600 Rh5AG346900 Rh5AG347000 Rh5BG357500 Rh5BG357700 Rh5BG485400 Rh5CG383100 Rh5CG383200 Rh5CG383300 Rh5CG509900 Rh5DG373000 Rh5DG373200 Rh6BG054300 Rh6BG126300 Rh6CG125100 Rh6CG185300 Rh6DG177000 Rh7AG276100 Rh7AG276200 Rh7BG230500 Rh7BG270500 Rh7BG364000 Rh7CG250100 Rh7CG295200 Rh7CG295300 Rh7DG389700
rosa_wichuraiana Rw0G001190 Rw0G010680 Rw0G013360 Rw0G014310 Rw0G014890 Rw0G020310 Rw0G021350 Rw0G022510 Rw1G003360 Rw1G004330 Rw1G006930 Rw1G008310 Rw1G021090 Rw1G021150 Rw1G021210 Rw1G023200 Rw1G023210 Rw1G028340 Rw1G028350 Rw1G028990 Rw1G032510 Rw1G039370 Rw1G039400 Rw1G039410 Rw1G039420 Rw1G039430 Rw2G006700 Rw2G020550 Rw2G020580 Rw3G012130 Rw3G012300 Rw3G012310 Rw3G028220 Rw3G029230 Rw5G021600 Rw5G032790 Rw6G011240 Rw7G027670 Rw7G032780

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 413
AatII GACGTC 1 cut(s) 481
AccB1I GGYRCC 1 cut(s) 1692
AccI GTMKAC 1 cut(s) 908
AciI CCGC 1 cut(s) 472
AclI AACGTT 2 cut(s) 211, 1445
AclWI GGATC 5 cut(s) 149, 175, 389, 402, 1125
AcsI RAATTY 2 cut(s) 444, 837
AcuI CTGAAG 3 cut(s) 782, 1142, 1362
AcyI GRCGYC 2 cut(s) 478, 1693
AdeI CACNNNGTG 1 cut(s) 620
AfaI GTAC 5 cut(s) 49, 164, 458, 987, 1733
AfiI CCNNNNNNNGG 3 cut(s) 343, 471, 637
AflII CTTAAG 1 cut(s) 1322
AflIII ACRYGT 1 cut(s) 453
AgsI TTSAA 7 cut(s) 703, 819, 888, 1091, 1280, 1361, 1588
AhlI ACTAGT 1 cut(s) 899
AjnI CCWGG 2 cut(s) 270, 389
AjuI GAANNNNNNNTTGG 2 cut(s) 418, 450
AluBI AGCT 6 cut(s) 67, 518, 566, 628, 1651, 1685
AluI AGCT 6 cut(s) 67, 518, 566, 628, 1651, 1685
Alw21I GWGCWC 1 cut(s) 1653
Alw26I GTCTC 3 cut(s) 1120, 1363, 1548
AlwI GGATC 5 cut(s) 149, 175, 389, 402, 1125
AlwNI CAGNNNCTG 1 cut(s) 1042
ApeKI GCWGC 2 cut(s) 1667, 1685
ApoI RAATTY 2 cut(s) 444, 837
Asp700I GAANNNNTTC 1 cut(s) 1284
AspLEI GCGC 1 cut(s) 1695
AspS9I GGNCC 1 cut(s) 285
AsuII TTCGAA 1 cut(s) 865
AvaII GGWCC 1 cut(s) 285
BaeGI GKGCMC 1 cut(s) 862
BaeI ACNNNNGTAYC 2 cut(s) 977, 1010
BamHI GGATCC 1 cut(s) 394
BanI GGYRCC 1 cut(s) 1692
BanII GRGCYC 1 cut(s) 1653
BbsI GAAGAC 4 cut(s) 305, 1037, 1350, 1665
Bbv12I GWGCWC 1 cut(s) 1653
BbvI GCAGC 2 cut(s) 1672, 1679
BccI CCATC 4 cut(s) 26, 102, 1148, 1529
BceAI ACGGC 3 cut(s) 202, 230, 812
BcgI CGANNNNNNTGC 2 cut(s) 1547, 1581
BciT130I CCWGG 2 cut(s) 272, 391
BciVI GTATCC 1 cut(s) 472
BcoDI GTCTC 3 cut(s) 1120, 1363, 1548
BcuI ACTAGT 1 cut(s) 899
BfaI CTAG 2 cut(s) 68, 900
BfoI RGCGCY 1 cut(s) 1696
BfrI CTTAAG 1 cut(s) 1322
BfuI GTATCC 1 cut(s) 472
BglII AGATCT 2 cut(s) 1057, 1532
BisI GCNGC 3 cut(s) 473, 1668, 1686
BlsI GCNGC 3 cut(s) 474, 1669, 1687
Bme1390I CCNGG 2 cut(s) 272, 391
Bme18I GGWCC 1 cut(s) 285
BmgT120I GGNCC 1 cut(s) 285
BmiI GGNNCC 3 cut(s) 287, 396, 1694
BmrFI CCNGG 2 cut(s) 272, 391
BmsI GCATC 1 cut(s) 1327
BpiI GAAGAC 4 cut(s) 305, 1037, 1350, 1665
BpmI CTGGAG 1 cut(s) 878
Bpu14I TTCGAA 1 cut(s) 865
BpuEI CTTGAG 3 cut(s) 487, 1115, 1530
Bsa29I ATCGAT 1 cut(s) 1182
BsaAI YACGTR 1 cut(s) 460
BsaBI GATNNNNATC 4 cut(s) 1056, 1116, 1307, 1391
BsaHI GRCGYC 2 cut(s) 478, 1693
BsaI GGTCTC 1 cut(s) 1363
BsaJI CCNNGG 3 cut(s) 184, 271, 390
BsaWI WCCGGW 2 cut(s) 742, 1236
BsaXI ACNNNNNCTCC 2 cut(s) 1461, 1491
Bsc4I CCNNNNNNNGG 3 cut(s) 343, 471, 637
Bse118I RCCGGY 1 cut(s) 637
Bse1I ACTGG 2 cut(s) 1328, 1425
Bse3DI GCAATG 1 cut(s) 656
Bse8I GATNNNNATC 4 cut(s) 1056, 1116, 1307, 1391
BseBI CCWGG 2 cut(s) 272, 391
BseCI ATCGAT 1 cut(s) 1182
BseDI CCNNGG 3 cut(s) 184, 271, 390
BseGI GGATG 6 cut(s) 37, 739, 1080, 1101, 1117, 1233
BseJI GATNNNNATC 4 cut(s) 1056, 1116, 1307, 1391
BseLI CCNNNNNNNGG 3 cut(s) 343, 471, 637
BseMI GCAATG 1 cut(s) 656
BseMII CTCAG 1 cut(s) 863
BseNI ACTGG 2 cut(s) 1328, 1425
BseRI GAGGAG 2 cut(s) 349, 620
BseSI GKGCMC 1 cut(s) 862
BseXI GCAGC 2 cut(s) 1672, 1679
BsgI GTGCAG 1 cut(s) 188
BshNI GGYRCC 1 cut(s) 1692
BshVI ATCGAT 1 cut(s) 1182
BsiHKAI GWGCWC 1 cut(s) 1653
BsiSI CCGG 3 cut(s) 638, 743, 1237
BslFI GGGAC 2 cut(s) 271, 360
BslI CCNNNNNNNGG 3 cut(s) 343, 471, 637
BsmAI GTCTC 3 cut(s) 1120, 1363, 1548
BsmFI GGGAC 2 cut(s) 271, 360
BsmI GAATGC 2 cut(s) 118, 1490
Bso31I GGTCTC 1 cut(s) 1363
Bsp119I TTCGAA 1 cut(s) 865
Bsp1286I GDGCHC 2 cut(s) 862, 1653
Bsp143I GATC 8 cut(s) 154, 180, 394, 1057, 1117, 1386, 1532, 1579
BspACI CCGC 1 cut(s) 472
BspCNI CTCAG 1 cut(s) 864
BspDI ATCGAT 1 cut(s) 1182
BspLI GGNNCC 3 cut(s) 287, 396, 1694
BspPI GGATC 5 cut(s) 149, 175, 389, 402, 1125
BspQI GCTCTTC 1 cut(s) 801
BspT104I TTCGAA 1 cut(s) 865
BspT107I GGYRCC 1 cut(s) 1692
BspTI CTTAAG 1 cut(s) 1322
BspTNI GGTCTC 1 cut(s) 1363
BsrDI GCAATG 1 cut(s) 656
BsrFI RCCGGY 1 cut(s) 637
BsrI ACTGG 2 cut(s) 1328, 1425
BssAI RCCGGY 1 cut(s) 637
BssECI CCNNGG 3 cut(s) 184, 271, 390
BssMI GATC 8 cut(s) 154, 180, 394, 1057, 1117, 1386, 1532, 1579
BssNAI GTATAC 1 cut(s) 909
BssNI GRCGYC 2 cut(s) 478, 1693
Bst1107I GTATAC 1 cut(s) 909
Bst2UI CCWGG 2 cut(s) 272, 391
Bst4CI ACNGT 3 cut(s) 167, 351, 1644
Bst6I CTCTTC 3 cut(s) 801, 1118, 1583
BstACI GRCGYC 2 cut(s) 478, 1693
BstAFI CTTAAG 1 cut(s) 1322
BstAPI GCANNNNNTGC 1 cut(s) 1195
BstBAI YACGTR 1 cut(s) 460
BstBI TTCGAA 1 cut(s) 865
BstC8I GCNNGC 1 cut(s) 9
BstDEI CTNAG 3 cut(s) 645, 872, 1725
BstDSI CCRYGG 1 cut(s) 184
BstENI CCTNNNNNAGG 1 cut(s) 341
BstF5I GGATG 6 cut(s) 37, 739, 1080, 1101, 1117, 1233
BstH2I RGCGCY 1 cut(s) 1696
BstHHI GCGC 1 cut(s) 1695
BstKTI GATC 8 cut(s) 157, 183, 397, 1060, 1120, 1389, 1535, 1582
BstMAI GTCTC 3 cut(s) 1120, 1363, 1548
BstMBI GATC 8 cut(s) 154, 180, 394, 1057, 1117, 1386, 1532, 1579
BstMWI GCNNNNNNNGC 7 cut(s) 94, 337, 634, 1195, 1324, 1574, 1657
BstNI CCWGG 2 cut(s) 272, 391
BstNSI RCATGY 3 cut(s) 457, 827, 1198
BstSCI CCNGG 2 cut(s) 270, 389
BstSLI GKGCMC 1 cut(s) 862
BstSNI TACGTA 1 cut(s) 460
BstV1I GCAGC 2 cut(s) 1672, 1679
BstV2I GAAGAC 4 cut(s) 305, 1037, 1350, 1665
BstX2I RGATCY 4 cut(s) 394, 1057, 1117, 1532
BstYI RGATCY 4 cut(s) 394, 1057, 1117, 1532
BstZ17I GTATAC 1 cut(s) 909
Bsu15I ATCGAT 1 cut(s) 1182
BsuI GTATCC 1 cut(s) 472
BsuTUI ATCGAT 1 cut(s) 1182
BtgI CCRYGG 1 cut(s) 184
BtsCI GGATG 6 cut(s) 37, 739, 1080, 1101, 1117, 1233
BtsIMutI CAGTG 2 cut(s) 1335, 1338
Cac8I GCNNGC 1 cut(s) 9
CaiI CAGNNNCTG 1 cut(s) 1042
CfoI GCGC 1 cut(s) 1695
Cfr10I RCCGGY 1 cut(s) 637
Cfr13I GGNCC 1 cut(s) 285
ClaI ATCGAT 1 cut(s) 1182
CseI GACGC 2 cut(s) 1042, 1659
Csp6I GTAC 5 cut(s) 48, 163, 457, 986, 1732
CviAII CATG 8 cut(s) 132, 454, 824, 952, 1144, 1195, 1396, 1410
CviQI GTAC 5 cut(s) 48, 163, 457, 986, 1732
DdeI CTNAG 3 cut(s) 645, 872, 1725
DinI GGCGCC 1 cut(s) 1694
DpnI GATC 8 cut(s) 156, 182, 396, 1059, 1119, 1388, 1534, 1581
DpnII GATC 8 cut(s) 154, 180, 394, 1057, 1117, 1386, 1532, 1579
DraIII CACNNNGTG 1 cut(s) 620
Eam1104I CTCTTC 3 cut(s) 801, 1118, 1583
EarI CTCTTC 3 cut(s) 801, 1118, 1583
Ecl136II GAGCTC 1 cut(s) 1651
Eco105I TACGTA 1 cut(s) 460
Eco24I GRGCYC 1 cut(s) 1653
Eco31I GGTCTC 1 cut(s) 1363
Eco32I GATATC 3 cut(s) 715, 939, 1180
Eco47I GGWCC 1 cut(s) 285
Eco53kI GAGCTC 1 cut(s) 1651
Eco57I CTGAAG 3 cut(s) 782, 1142, 1362
EcoICRI GAGCTC 1 cut(s) 1651
EcoNI CCTNNNNNAGG 1 cut(s) 341
EcoRII CCWGG 2 cut(s) 270, 389
EcoRV GATATC 3 cut(s) 715, 939, 1180
EcoT38I GRGCYC 1 cut(s) 1653
EgeI GGCGCC 1 cut(s) 1694
EheI GGCGCC 1 cut(s) 1694
FaeI CATG 8 cut(s) 135, 457, 827, 955, 1147, 1198, 1399, 1413
FalI AAGNNNNNCTT 4 cut(s) 63, 95, 1373, 1405
FaqI GGGAC 2 cut(s) 271, 360
FatI CATG 8 cut(s) 131, 453, 823, 951, 1143, 1194, 1395, 1409
FblI GTMKAC 1 cut(s) 908
Fnu4HI GCNGC 3 cut(s) 473, 1668, 1686
FokI GGATG 6 cut(s) 44, 726, 1067, 1088, 1124, 1220
FriOI GRGCYC 1 cut(s) 1653
Fsp4HI GCNGC 3 cut(s) 473, 1668, 1686
FspBI CTAG 2 cut(s) 68, 900
GlaI GCGC 1 cut(s) 1694
GluI GCNGC 3 cut(s) 473, 1668, 1686
GsuI CTGGAG 1 cut(s) 878
HaeII RGCGCY 1 cut(s) 1696
HapII CCGG 3 cut(s) 638, 743, 1237
HgaI GACGC 2 cut(s) 1042, 1659
HhaI GCGC 1 cut(s) 1695
Hin1I GRCGYC 2 cut(s) 478, 1693
Hin1II CATG 8 cut(s) 135, 457, 827, 955, 1147, 1198, 1399, 1413
Hin6I GCGC 1 cut(s) 1693
HinP1I GCGC 1 cut(s) 1693
HinfI GANTC 7 cut(s) 421, 992, 1013, 1128, 1230, 1253, 1738
HpaII CCGG 3 cut(s) 638, 743, 1237
Hpy166II GTNNAC 4 cut(s) 222, 236, 909, 1517
Hpy188I TCNGA 4 cut(s) 373, 873, 1085, 1122
Hpy188III TCNNGA 9 cut(s) 288, 418, 495, 671, 761, 895, 1132, 1289, 1361
Hpy8I GTNNAC 4 cut(s) 222, 236, 909, 1517
Hpy99I CGWCG 2 cut(s) 251, 480
HpyAV CCTTC 2 cut(s) 542, 547
HpyCH4III ACNGT 3 cut(s) 167, 351, 1644
HpyCH4IV ACGT 5 cut(s) 211, 224, 459, 478, 1445
HpyCH4V TGCA 9 cut(s) 116, 137, 143, 205, 980, 1189, 1399, 1409, 1706
HpyF10VI GCNNNNNNNGC 7 cut(s) 94, 337, 634, 1195, 1324, 1574, 1657
HpyF3I CTNAG 3 cut(s) 645, 872, 1725
HpySE526I ACGT 5 cut(s) 211, 224, 459, 478, 1445
Hsp92I GRCGYC 2 cut(s) 478, 1693
Hsp92II CATG 8 cut(s) 135, 457, 827, 955, 1147, 1198, 1399, 1413
HspAI GCGC 1 cut(s) 1693
KasI GGCGCC 1 cut(s) 1692
Kzo9I GATC 8 cut(s) 154, 180, 394, 1057, 1117, 1386, 1532, 1579
LguI GCTCTTC 1 cut(s) 801
LmnI GCTCC 6 cut(s) 4, 178, 563, 633, 1648, 1657
Lsp1109I GCAGC 2 cut(s) 1672, 1679
LweI GCATC 1 cut(s) 1327
MaeI CTAG 2 cut(s) 68, 900
MaeII ACGT 5 cut(s) 211, 224, 459, 478, 1445
MaeIII GTNAC 8 cut(s) 167, 351, 612, 640, 808, 993, 1330, 1427
MalI GATC 8 cut(s) 156, 182, 396, 1059, 1119, 1388, 1534, 1581
MboI GATC 8 cut(s) 154, 180, 394, 1057, 1117, 1386, 1532, 1579
MfeI CAATTG 1 cut(s) 138
MflI RGATCY 4 cut(s) 394, 1057, 1117, 1532
MhlI GDGCHC 2 cut(s) 862, 1653
MluCI AATT 6 cut(s) 51, 138, 374, 444, 731, 837
Mly113I GGCGCC 1 cut(s) 1693
MlyI GAGTC 4 cut(s) 415, 1001, 1022, 1122
MmeI TCCRAC 2 cut(s) 587, 1626
MroXI GAANNNNTTC 1 cut(s) 1284
MseI TTAA 6 cut(s) 81, 489, 747, 1323, 1448, 1481
MspA1I CMGCKG 1 cut(s) 518
MspCI CTTAAG 1 cut(s) 1322
MspI CCGG 3 cut(s) 638, 743, 1237
MspR9I CCNGG 2 cut(s) 272, 391
MunI CAATTG 1 cut(s) 138
Mva1269I GAATGC 2 cut(s) 118, 1490
MvaI CCWGG 2 cut(s) 272, 391
MwoI GCNNNNNNNGC 7 cut(s) 94, 337, 634, 1195, 1324, 1574, 1657
NarI GGCGCC 1 cut(s) 1693
NdeII GATC 8 cut(s) 154, 180, 394, 1057, 1117, 1386, 1532, 1579
NlaIII CATG 8 cut(s) 135, 457, 827, 955, 1147, 1198, 1399, 1413
NlaIV GGNNCC 3 cut(s) 287, 396, 1694
NmuCI GTSAC 5 cut(s) 612, 640, 808, 993, 1330
NspI RCATGY 3 cut(s) 457, 827, 1198
NspV TTCGAA 1 cut(s) 865
PciI ACATGT 1 cut(s) 453
PciSI GCTCTTC 1 cut(s) 801
PctI GAATGC 2 cut(s) 118, 1490
PdmI GAANNNNTTC 1 cut(s) 1284
PfeI GAWTC 3 cut(s) 1230, 1253, 1738
PkrI GCNGC 3 cut(s) 474, 1669, 1687
PleI GAGTC 4 cut(s) 415, 1000, 1021, 1122
PluTI GGCGCC 1 cut(s) 1696
PpsI GAGTC 4 cut(s) 415, 1000, 1021, 1122
Ppu21I YACGTR 1 cut(s) 460
PscI ACATGT 1 cut(s) 453
PsiI TTATAA 1 cut(s) 413
Psp124BI GAGCTC 1 cut(s) 1653
Psp1406I AACGTT 2 cut(s) 211, 1445
Psp6I CCWGG 2 cut(s) 270, 389
PspGI CCWGG 2 cut(s) 270, 389
PspN4I GGNNCC 3 cut(s) 287, 396, 1694
PspPI GGNCC 1 cut(s) 285
PstNI CAGNNNCTG 1 cut(s) 1042
PsuI RGATCY 4 cut(s) 394, 1057, 1117, 1532
PvuII CAGCTG 1 cut(s) 518
RsaI GTAC 5 cut(s) 49, 164, 458, 987, 1733
RsaNI GTAC 5 cut(s) 48, 163, 457, 986, 1732
SacI GAGCTC 1 cut(s) 1653
SapI GCTCTTC 1 cut(s) 801
SaqAI TTAA 6 cut(s) 81, 489, 747, 1323, 1448, 1481
SatI GCNGC 3 cut(s) 473, 1668, 1686
Sau3AI GATC 8 cut(s) 154, 180, 394, 1057, 1117, 1386, 1532, 1579
Sau96I GGNCC 1 cut(s) 285
SchI GAGTC 4 cut(s) 415, 1001, 1022, 1122
ScrFI CCNGG 2 cut(s) 272, 391
SduI GDGCHC 2 cut(s) 862, 1653
SfaNI GCATC 1 cut(s) 1327
SfoI GGCGCC 1 cut(s) 1694
SfuI TTCGAA 1 cut(s) 865
SinI GGWCC 1 cut(s) 285
SmlI CTYRAG 4 cut(s) 466, 1130, 1322, 1545
SmoI CTYRAG 4 cut(s) 466, 1130, 1322, 1545
SnaBI TACGTA 1 cut(s) 460
SpeI ACTAGT 1 cut(s) 899
Sse9I AATT 6 cut(s) 51, 138, 374, 444, 731, 837
SsiI CCGC 1 cut(s) 472
SspDI GGCGCC 1 cut(s) 1692
SspI AATATT 2 cut(s) 434, 1285
SspMI CTAG 2 cut(s) 68, 900
SstI GAGCTC 1 cut(s) 1653
StyD4I CCNGG 2 cut(s) 270, 389
TaaI ACNGT 3 cut(s) 167, 351, 1644
TaiI ACGT 5 cut(s) 214, 227, 462, 481, 1448
TaqI TCGA 6 cut(s) 249, 267, 670, 865, 1182, 1557
TasI AATT 6 cut(s) 51, 138, 374, 444, 731, 837
TatI WGTACW 2 cut(s) 47, 162
TauI GCSGC 1 cut(s) 475
TfiI GAWTC 3 cut(s) 1230, 1253, 1738
Tru1I TTAA 6 cut(s) 81, 489, 747, 1323, 1448, 1481
Tru9I TTAA 6 cut(s) 81, 489, 747, 1323, 1448, 1481
TscAI CASTG 2 cut(s) 1335, 1345
TseFI GTSAC 5 cut(s) 612, 640, 808, 993, 1330
TseI GCWGC 2 cut(s) 1667, 1685
Tsp45I GTSAC 5 cut(s) 612, 640, 808, 993, 1330
TspDTI ATGAA 2 cut(s) 139, 1381
TspGWI ACGGA 2 cut(s) 1482, 1688
TspRI CASTG 2 cut(s) 1335, 1345
Vha464I CTTAAG 1 cut(s) 1322
VpaK11BI GGWCC 1 cut(s) 285
XagI CCTNNNNNAGG 1 cut(s) 341
XapI RAATTY 2 cut(s) 444, 837
XceI RCATGY 3 cut(s) 457, 827, 1198
XcmI CCANNNNNNNNNTGG 1 cut(s) 105
XmiI GTMKAC 1 cut(s) 908
XmnI GAANNNNTTC 1 cut(s) 1284
XspI CTAG 2 cut(s) 68, 900
ZraI GACGTC 1 cut(s) 479
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.