Cyclic nucleotide-gated ion channel 1-like
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1312 |
| Acc36I | ACCTGC | 1 cut(s) | 1312 |
| AccB1I | GGYRCC | 1 cut(s) | 1324 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1342 |
| AccBSI | CCGCTC | 1 cut(s) | 1306 |
| AccI | GTMKAC | 3 cut(s) | 874, 1394, 2346 |
| AccII | CGCG | 1 cut(s) | 12 |
| AciI | CCGC | 6 cut(s) | 10, 388, 1304, 1557, 1593, 2112 |
| AclI | AACGTT | 1 cut(s) | 1891 |
| AclWI | GGATC | 5 cut(s) | 194, 207, 809, 1251, 1383 |
| AcoI | YGGCCR | 3 cut(s) | 107, 1544, 2514 |
| AcsI | RAATTY | 9 cut(s) | 64, 122, 333, 625, 889, 1045, 1722, 2083, 2446 |
| AcuI | CTGAAG | 3 cut(s) | 287, 848, 2703 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 994, 1342, 2638 |
| AflIII | ACRYGT | 2 cut(s) | 1957, 2697 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1995 |
| AjnI | CCWGG | 3 cut(s) | 432, 491, 2364 |
| AleI | CACNNNNGTG | 1 cut(s) | 1385 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 191, 223, 1471, 1503 |
| AluBI | AGCT | 9 cut(s) | 416, 499, 1054, 1901, 2105, 2352, 2602, 2717, 2730 |
| AluI | AGCT | 9 cut(s) | 416, 499, 1054, 1901, 2105, 2352, 2602, 2717, 2730 |
| Alw21I | GWGCWC | 3 cut(s) | 90, 2046, 2604 |
| Alw26I | GTCTC | 6 cut(s) | 585, 590, 910, 1960, 1982, 2468 |
| Alw44I | GTGCAC | 1 cut(s) | 86 |
| AlwI | GGATC | 5 cut(s) | 194, 207, 809, 1251, 1383 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 599 |
| Ama87I | CYCGRG | 2 cut(s) | 2144, 2303 |
| AoxI | GGCC | 8 cut(s) | 107, 588, 925, 1544, 1782, 2408, 2514, 2573 |
| ApaLI | GTGCAC | 1 cut(s) | 86 |
| ApeKI | GCWGC | 4 cut(s) | 1051, 1745, 2102, 2714 |
| ApoI | RAATTY | 9 cut(s) | 64, 122, 333, 625, 889, 1045, 1722, 2083, 2446 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 457, 489, 2684, 2716 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 629, 1673 |
| AspLEI | GCGC | 1 cut(s) | 1078 |
| AspS9I | GGNCC | 4 cut(s) | 390, 925, 2237, 2409 |
| AsuHPI | GGTGA | 4 cut(s) | 1619, 1829, 2174, 2272 |
| AsuII | TTCGAA | 1 cut(s) | 458 |
| AsuNHI | GCTAGC | 3 cut(s) | 115, 647, 2726 |
| AvaI | CYCGRG | 2 cut(s) | 2144, 2303 |
| AvaII | GGWCC | 2 cut(s) | 390, 2237 |
| BaeGI | GKGCMC | 1 cut(s) | 90 |
| BalI | TGGCCA | 1 cut(s) | 1546 |
| BamHI | GGATCC | 1 cut(s) | 199 |
| BanI | GGYRCC | 1 cut(s) | 1324 |
| BanII | GRGCYC | 2 cut(s) | 36, 2604 |
| BauI | CACGAG | 1 cut(s) | 2400 |
| BbsI | GAAGAC | 2 cut(s) | 275, 1644 |
| Bbv12I | GWGCWC | 3 cut(s) | 90, 2046, 2604 |
| BbvI | GCAGC | 4 cut(s) | 1063, 1757, 2114, 2726 |
| BccI | CCATC | 4 cut(s) | 1451, 1555, 2465, 2640 |
| BceAI | ACGGC | 4 cut(s) | 486, 650, 1168, 2501 |
| BciT130I | CCWGG | 3 cut(s) | 434, 493, 2366 |
| BclI | TGATCA | 2 cut(s) | 1798, 2482 |
| BcoDI | GTCTC | 6 cut(s) | 585, 590, 910, 1960, 1982, 2468 |
| BfaI | CTAG | 9 cut(s) | 116, 648, 698, 870, 1055, 1311, 1538, 2661, 2727 |
| BfmI | CTRYAG | 1 cut(s) | 2347 |
| BfuAI | ACCTGC | 1 cut(s) | 1312 |
| BglII | AGATCT | 3 cut(s) | 301, 479, 2618 |
| BisI | GCNGC | 5 cut(s) | 1052, 1304, 1746, 2103, 2715 |
| BlsI | GCNGC | 5 cut(s) | 1053, 1305, 1747, 2104, 2716 |
| BmcAI | AGTACT | 2 cut(s) | 1356, 1694 |
| Bme1390I | CCNGG | 3 cut(s) | 434, 493, 2366 |
| Bme18I | GGWCC | 2 cut(s) | 390, 2237 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1995 |
| BmeT110I | CYCGRG | 2 cut(s) | 2144, 2303 |
| BmgT120I | GGNCC | 4 cut(s) | 390, 925, 2237, 2409 |
| BmiI | GGNNCC | 6 cut(s) | 33, 201, 570, 664, 926, 1326 |
| BmrFI | CCNGG | 3 cut(s) | 434, 493, 2366 |
| BmrI | ACTGGG | 2 cut(s) | 960, 1514 |
| BmsI | GCATC | 2 cut(s) | 725, 814 |
| BmtI | GCTAGC | 3 cut(s) | 119, 651, 2730 |
| BmuI | ACTGGG | 2 cut(s) | 960, 1514 |
| BpiI | GAAGAC | 2 cut(s) | 275, 1644 |
| BpmI | CTGGAG | 3 cut(s) | 944, 1319, 2136 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1579, 1596 |
| Bpu14I | TTCGAA | 1 cut(s) | 458 |
| BpuEI | CTTGAG | 1 cut(s) | 1881 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1242 |
| BsaI | GGTCTC | 2 cut(s) | 910, 2468 |
| BsaJI | CCNNGG | 4 cut(s) | 21, 432, 585, 2158 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 994, 1342, 2638 |
| Bse118I | RCCGGY | 1 cut(s) | 109 |
| Bse1I | ACTGG | 7 cut(s) | 143, 744, 966, 1113, 1328, 1385, 1509 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1242 |
| BseBI | CCWGG | 3 cut(s) | 434, 493, 2366 |
| BseDI | CCNNGG | 4 cut(s) | 21, 432, 585, 2158 |
| BseGI | GGATG | 7 cut(s) | 639, 740, 1237, 1462, 2154, 2476, 2632 |
| BseJI | GATNNNNATC | 1 cut(s) | 1242 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 994, 1342, 2638 |
| BseMII | CTCAG | 4 cut(s) | 60, 1642, 1731, 2589 |
| BseNI | ACTGG | 7 cut(s) | 143, 744, 966, 1113, 1328, 1385, 1509 |
| BseRI | GAGGAG | 1 cut(s) | 2660 |
| BseSI | GKGCMC | 1 cut(s) | 90 |
| BseXI | GCAGC | 4 cut(s) | 1063, 1757, 2114, 2726 |
| BsgI | GTGCAG | 1 cut(s) | 1530 |
| Bsh1236I | CGCG | 1 cut(s) | 12 |
| BshFI | GGCC | 8 cut(s) | 109, 590, 927, 1546, 1784, 2410, 2516, 2575 |
| BshNI | GGYRCC | 1 cut(s) | 1324 |
| BsiHKAI | GWGCWC | 3 cut(s) | 90, 2046, 2604 |
| BsiHKCI | CYCGRG | 2 cut(s) | 2144, 2303 |
| BsiSI | CCGG | 1 cut(s) | 110 |
| BslFI | GGGAC | 2 cut(s) | 2239, 2296 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 994, 1342, 2638 |
| BsmAI | GTCTC | 6 cut(s) | 585, 590, 910, 1960, 1982, 2468 |
| BsmFI | GGGAC | 2 cut(s) | 2239, 2296 |
| BsmI | GAATGC | 1 cut(s) | 699 |
| BsnI | GGCC | 8 cut(s) | 109, 590, 927, 1546, 1784, 2410, 2516, 2575 |
| Bso31I | GGTCTC | 2 cut(s) | 910, 2468 |
| BsoBI | CYCGRG | 2 cut(s) | 2144, 2303 |
| Bsp119I | TTCGAA | 1 cut(s) | 458 |
| Bsp1286I | GDGCHC | 4 cut(s) | 36, 90, 2046, 2604 |
| Bsp1407I | TGTACA | 2 cut(s) | 213, 636 |
| Bsp19I | CCATGG | 1 cut(s) | 2158 |
| BspACI | CCGC | 6 cut(s) | 10, 388, 1304, 1557, 1593, 2112 |
| BspANI | GGCC | 8 cut(s) | 109, 590, 927, 1546, 1784, 2410, 2516, 2575 |
| BspCNI | CTCAG | 4 cut(s) | 61, 1641, 1732, 2590 |
| BspFNI | CGCG | 1 cut(s) | 12 |
| BspHI | TCATGA | 3 cut(s) | 760, 2245, 2485 |
| BspLI | GGNNCC | 6 cut(s) | 33, 201, 570, 664, 926, 1326 |
| BspMI | ACCTGC | 1 cut(s) | 1312 |
| BspOI | GCTAGC | 3 cut(s) | 119, 651, 2730 |
| BspPI | GGATC | 5 cut(s) | 194, 207, 809, 1251, 1383 |
| BspQI | GCTCTTC | 1 cut(s) | 1451 |
| BspT104I | TTCGAA | 1 cut(s) | 458 |
| BspT107I | GGYRCC | 1 cut(s) | 1324 |
| BspTNI | GGTCTC | 2 cut(s) | 910, 2468 |
| BsrBI | CCGCTC | 1 cut(s) | 1306 |
| BsrFI | RCCGGY | 1 cut(s) | 109 |
| BsrGI | TGTACA | 2 cut(s) | 213, 636 |
| BsrI | ACTGG | 7 cut(s) | 143, 744, 966, 1113, 1328, 1385, 1509 |
| BssAI | RCCGGY | 1 cut(s) | 109 |
| BssECI | CCNNGG | 4 cut(s) | 21, 432, 585, 2158 |
| BssNAI | GTATAC | 2 cut(s) | 875, 1395 |
| BssSI | CACGAG | 1 cut(s) | 2400 |
| BssT1I | CCWWGG | 3 cut(s) | 21, 585, 2158 |
| Bst1107I | GTATAC | 2 cut(s) | 875, 1395 |
| Bst2BI | CACGAG | 1 cut(s) | 2400 |
| Bst2UI | CCWGG | 3 cut(s) | 434, 493, 2366 |
| Bst4CI | ACNGT | 4 cut(s) | 775, 1487, 1867, 2076 |
| Bst6I | CTCTTC | 2 cut(s) | 1451, 2412 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2140 |
| BstAUI | TGTACA | 2 cut(s) | 213, 636 |
| BstBI | TTCGAA | 1 cut(s) | 458 |
| BstC8I | GCNNGC | 7 cut(s) | 117, 649, 707, 1019, 1910, 2712, 2728 |
| BstDEI | CTNAG | 7 cut(s) | 69, 1579, 1596, 1628, 1740, 1972, 2598 |
| BstDSI | CCRYGG | 1 cut(s) | 2158 |
| BstF5I | GGATG | 7 cut(s) | 639, 740, 1237, 1462, 2154, 2476, 2632 |
| BstFNI | CGCG | 1 cut(s) | 12 |
| BstHHI | GCGC | 1 cut(s) | 1078 |
| BstMAI | GTCTC | 6 cut(s) | 585, 590, 910, 1960, 1982, 2468 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 2111, 2140, 2723 |
| BstNI | CCWGG | 3 cut(s) | 434, 493, 2366 |
| BstNSI | RCATGY | 3 cut(s) | 1961, 2701, 2714 |
| BstSCI | CCNGG | 3 cut(s) | 432, 491, 2364 |
| BstSFI | CTRYAG | 1 cut(s) | 2347 |
| BstSLI | GKGCMC | 1 cut(s) | 90 |
| BstUI | CGCG | 1 cut(s) | 12 |
| BstV1I | GCAGC | 4 cut(s) | 1063, 1757, 2114, 2726 |
| BstV2I | GAAGAC | 2 cut(s) | 275, 1644 |
| BstX2I | RGATCY | 6 cut(s) | 199, 301, 479, 814, 1375, 2618 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 659, 979 |
| BstYI | RGATCY | 6 cut(s) | 199, 301, 479, 814, 1375, 2618 |
| BstZ17I | GTATAC | 2 cut(s) | 875, 1395 |
| BsuRI | GGCC | 8 cut(s) | 109, 590, 927, 1546, 1784, 2410, 2516, 2575 |
| BtgI | CCRYGG | 1 cut(s) | 2158 |
| BtsCI | GGATG | 7 cut(s) | 639, 740, 1237, 1462, 2154, 2476, 2632 |
| BtsI | GCAGTG | 1 cut(s) | 1059 |
| BtsIMutI | CAGTG | 6 cut(s) | 1059, 1392, 1748, 2072, 2457, 2595 |
| BveI | ACCTGC | 1 cut(s) | 1312 |
| Cac8I | GCNNGC | 7 cut(s) | 117, 649, 707, 1019, 1910, 2712, 2728 |
| CaiI | CAGNNNCTG | 1 cut(s) | 599 |
| CciI | TCATGA | 3 cut(s) | 760, 2245, 2485 |
| CfoI | GCGC | 1 cut(s) | 1078 |
| Cfr10I | RCCGGY | 1 cut(s) | 109 |
| Cfr13I | GGNCC | 4 cut(s) | 390, 925, 2237, 2409 |
| CseI | GACGC | 1 cut(s) | 2732 |
| DdeI | CTNAG | 7 cut(s) | 69, 1579, 1596, 1628, 1740, 1972, 2598 |
| DraI | TTTAAA | 1 cut(s) | 1201 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1995 |
| EaeI | YGGCCR | 3 cut(s) | 107, 1544, 2514 |
| Eam1104I | CTCTTC | 2 cut(s) | 1451, 2412 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1995 |
| EarI | CTCTTC | 2 cut(s) | 1451, 2412 |
| Ecl136II | GAGCTC | 1 cut(s) | 2602 |
| Eco130I | CCWWGG | 3 cut(s) | 21, 585, 2158 |
| Eco147I | AGGCCT | 1 cut(s) | 2575 |
| Eco24I | GRGCYC | 2 cut(s) | 36, 2604 |
| Eco31I | GGTCTC | 2 cut(s) | 910, 2468 |
| Eco47I | GGWCC | 2 cut(s) | 390, 2237 |
| Eco53kI | GAGCTC | 1 cut(s) | 2602 |
| Eco57I | CTGAAG | 3 cut(s) | 287, 848, 2703 |
| Eco88I | CYCGRG | 2 cut(s) | 2144, 2303 |
| EcoICRI | GAGCTC | 1 cut(s) | 2602 |
| EcoO109I | RGGNCCY | 1 cut(s) | 925 |
| EcoRII | CCWGG | 3 cut(s) | 432, 491, 2364 |
| EcoT14I | CCWWGG | 3 cut(s) | 21, 585, 2158 |
| EcoT38I | GRGCYC | 2 cut(s) | 36, 2604 |
| ErhI | CCWWGG | 3 cut(s) | 21, 585, 2158 |
| FaqI | GGGAC | 2 cut(s) | 2239, 2296 |
| FbaI | TGATCA | 2 cut(s) | 1798, 2482 |
| FblI | GTMKAC | 3 cut(s) | 874, 1394, 2346 |
| Fnu4HI | GCNGC | 5 cut(s) | 1052, 1304, 1746, 2103, 2715 |
| FokI | GGATG | 7 cut(s) | 626, 747, 1244, 1469, 2141, 2483, 2619 |
| FriOI | GRGCYC | 2 cut(s) | 36, 2604 |
| Fsp4HI | GCNGC | 5 cut(s) | 1052, 1304, 1746, 2103, 2715 |
| FspBI | CTAG | 9 cut(s) | 116, 648, 698, 870, 1055, 1311, 1538, 2661, 2727 |
| GlaI | GCGC | 1 cut(s) | 1077 |
| GluI | GCNGC | 5 cut(s) | 1052, 1304, 1746, 2103, 2715 |
| GsuI | CTGGAG | 3 cut(s) | 944, 1319, 2136 |
| HaeIII | GGCC | 8 cut(s) | 109, 590, 927, 1546, 1784, 2410, 2516, 2575 |
| HapII | CCGG | 1 cut(s) | 110 |
| HgaI | GACGC | 1 cut(s) | 2732 |
| HhaI | GCGC | 1 cut(s) | 1078 |
| Hin6I | GCGC | 1 cut(s) | 1076 |
| HinP1I | GCGC | 1 cut(s) | 1076 |
| HindIII | AAGCTT | 1 cut(s) | 497 |
| HinfI | GANTC | 7 cut(s) | 59, 142, 1589, 1809, 1968, 2147, 2750 |
| HpaII | CCGG | 1 cut(s) | 110 |
| HphI | GGTGA | 4 cut(s) | 1619, 1829, 2174, 2272 |
| Hpy166II | GTNNAC | 7 cut(s) | 88, 875, 1395, 1840, 2347, 2425, 2552 |
| Hpy188I | TCNGA | 8 cut(s) | 70, 222, 522, 1043, 1741, 1905, 2722, 2755 |
| Hpy8I | GTNNAC | 7 cut(s) | 88, 875, 1395, 1840, 2347, 2425, 2552 |
| Hpy99I | CGWCG | 2 cut(s) | 260, 472 |
| HpyAV | CCTTC | 7 cut(s) | 34, 151, 431, 1094, 1168, 1814, 2586 |
| HpyCH4III | ACNGT | 4 cut(s) | 775, 1487, 1867, 2076 |
| HpyCH4IV | ACGT | 2 cut(s) | 1735, 1891 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 2111, 2140, 2723 |
| HpyF3I | CTNAG | 7 cut(s) | 69, 1579, 1596, 1628, 1740, 1972, 2598 |
| HpySE526I | ACGT | 2 cut(s) | 1735, 1891 |
| HspAI | GCGC | 1 cut(s) | 1076 |
| Ksp22I | TGATCA | 2 cut(s) | 1798, 2482 |
| LguI | GCTCTTC | 1 cut(s) | 1451 |
| LmnI | GCTCC | 6 cut(s) | 31, 662, 1832, 1905, 2117, 2647 |
| Lsp1109I | GCAGC | 4 cut(s) | 1063, 1757, 2114, 2726 |
| LweI | GCATC | 2 cut(s) | 725, 814 |
| MaeI | CTAG | 9 cut(s) | 116, 648, 698, 870, 1055, 1311, 1538, 2661, 2727 |
| MaeII | ACGT | 2 cut(s) | 1735, 1891 |
| MaeIII | GTNAC | 6 cut(s) | 16, 169, 532, 1468, 2318, 2436 |
| MbiI | CCGCTC | 1 cut(s) | 1306 |
| MfeI | CAATTG | 2 cut(s) | 381, 1602 |
| MflI | RGATCY | 6 cut(s) | 199, 301, 479, 814, 1375, 2618 |
| MhlI | GDGCHC | 4 cut(s) | 36, 90, 2046, 2604 |
| MlsI | TGGCCA | 1 cut(s) | 1546 |
| MluNI | TGGCCA | 1 cut(s) | 1546 |
| MlyI | GAGTC | 3 cut(s) | 1583, 1962, 2156 |
| MmeI | TCCRAC | 3 cut(s) | 389, 1711, 2196 |
| Mox20I | TGGCCA | 1 cut(s) | 1546 |
| MroXI | GAANNNNTTC | 2 cut(s) | 629, 1673 |
| MscI | TGGCCA | 1 cut(s) | 1546 |
| MseI | TTAA | 5 cut(s) | 6, 786, 1200, 1659, 1776 |
| MslI | CAYNNNNRTG | 5 cut(s) | 1385, 1956, 2049, 2163, 2545 |
| Msp20I | TGGCCA | 1 cut(s) | 1546 |
| MspA1I | CMGCKG | 2 cut(s) | 2105, 2114 |
| MspI | CCGG | 1 cut(s) | 110 |
| MspR9I | CCNGG | 3 cut(s) | 434, 493, 2366 |
| MunI | CAATTG | 2 cut(s) | 381, 1602 |
| Mva1269I | GAATGC | 1 cut(s) | 699 |
| MvaI | CCWGG | 3 cut(s) | 434, 493, 2366 |
| MvnI | CGCG | 1 cut(s) | 12 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 2111, 2140, 2723 |
| NcoI | CCATGG | 1 cut(s) | 2158 |
| NheI | GCTAGC | 3 cut(s) | 115, 647, 2726 |
| NlaIV | GGNNCC | 6 cut(s) | 33, 201, 570, 664, 926, 1326 |
| NmeAIII | GCCGAG | 1 cut(s) | 2183 |
| NmuCI | GTSAC | 3 cut(s) | 16, 532, 1468 |
| NspI | RCATGY | 3 cut(s) | 1961, 2701, 2714 |
| NspV | TTCGAA | 1 cut(s) | 458 |
| OliI | CACNNNNGTG | 1 cut(s) | 1385 |
| PaeI | GCATGC | 1 cut(s) | 2714 |
| PagI | TCATGA | 3 cut(s) | 760, 2245, 2485 |
| PaqCI | CACCTGC | 1 cut(s) | 1312 |
| PceI | AGGCCT | 1 cut(s) | 2575 |
| PciI | ACATGT | 2 cut(s) | 1957, 2697 |
| PciSI | GCTCTTC | 1 cut(s) | 1451 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 464, 473 |
| PctI | GAATGC | 1 cut(s) | 699 |
| PdmI | GAANNNNTTC | 2 cut(s) | 629, 1673 |
| PfeI | GAWTC | 4 cut(s) | 59, 142, 1809, 2750 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1342 |
| PkrI | GCNGC | 5 cut(s) | 1053, 1305, 1747, 2104, 2716 |
| PleI | GAGTC | 3 cut(s) | 1583, 1962, 2155 |
| PpsI | GAGTC | 3 cut(s) | 1583, 1962, 2155 |
| PscI | ACATGT | 2 cut(s) | 1957, 2697 |
| Psp124BI | GAGCTC | 1 cut(s) | 2604 |
| Psp1406I | AACGTT | 1 cut(s) | 1891 |
| Psp6I | CCWGG | 3 cut(s) | 432, 491, 2364 |
| PspGI | CCWGG | 3 cut(s) | 432, 491, 2364 |
| PspN4I | GGNNCC | 6 cut(s) | 33, 201, 570, 664, 926, 1326 |
| PspPI | GGNCC | 4 cut(s) | 390, 925, 2237, 2409 |
| PstNI | CAGNNNCTG | 1 cut(s) | 599 |
| PsuI | RGATCY | 6 cut(s) | 199, 301, 479, 814, 1375, 2618 |
| PvuII | CAGCTG | 1 cut(s) | 2105 |
| RseI | CAYNNNNRTG | 5 cut(s) | 1385, 1956, 2049, 2163, 2545 |
| SacI | GAGCTC | 1 cut(s) | 2604 |
| SapI | GCTCTTC | 1 cut(s) | 1451 |
| SaqAI | TTAA | 5 cut(s) | 6, 786, 1200, 1659, 1776 |
| SatI | GCNGC | 5 cut(s) | 1052, 1304, 1746, 2103, 2715 |
| Sau96I | GGNCC | 4 cut(s) | 390, 925, 2237, 2409 |
| ScaI | AGTACT | 2 cut(s) | 1356, 1694 |
| SchI | GAGTC | 3 cut(s) | 1583, 1962, 2156 |
| ScrFI | CCNGG | 3 cut(s) | 434, 493, 2366 |
| SduI | GDGCHC | 4 cut(s) | 36, 90, 2046, 2604 |
| SfaNI | GCATC | 2 cut(s) | 725, 814 |
| SfcI | CTRYAG | 1 cut(s) | 2347 |
| SfuI | TTCGAA | 1 cut(s) | 458 |
| SinI | GGWCC | 2 cut(s) | 390, 2237 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 1385, 1956, 2049, 2163, 2545 |
| SmlI | CTYRAG | 1 cut(s) | 1896 |
| SmoI | CTYRAG | 1 cut(s) | 1896 |
| SphI | GCATGC | 1 cut(s) | 2714 |
| SseBI | AGGCCT | 1 cut(s) | 2575 |
| SsiI | CCGC | 6 cut(s) | 10, 388, 1304, 1557, 1593, 2112 |
| SspI | AATATT | 2 cut(s) | 165, 2765 |
| SspMI | CTAG | 9 cut(s) | 116, 648, 698, 870, 1055, 1311, 1538, 2661, 2727 |
| SstI | GAGCTC | 1 cut(s) | 2604 |
| StuI | AGGCCT | 1 cut(s) | 2575 |
| StyD4I | CCNGG | 3 cut(s) | 432, 491, 2364 |
| StyI | CCWWGG | 3 cut(s) | 21, 585, 2158 |
| TaaI | ACNGT | 4 cut(s) | 775, 1487, 1867, 2076 |
| TaiI | ACGT | 2 cut(s) | 1738, 1894 |
| TaqI | TCGA | 8 cut(s) | 38, 255, 458, 476, 908, 1098, 1187, 1417 |
| TatI | WGTACW | 7 cut(s) | 213, 636, 746, 1354, 1683, 1692, 2016 |
| TauI | GCSGC | 1 cut(s) | 1306 |
| TfiI | GAWTC | 4 cut(s) | 59, 142, 1809, 2750 |
| Tru1I | TTAA | 5 cut(s) | 6, 786, 1200, 1659, 1776 |
| Tru9I | TTAA | 5 cut(s) | 6, 786, 1200, 1659, 1776 |
| TscAI | CASTG | 6 cut(s) | 1066, 1392, 1755, 2079, 2457, 2602 |
| TseFI | GTSAC | 3 cut(s) | 16, 532, 1468 |
| TseI | GCWGC | 4 cut(s) | 1051, 1745, 2102, 2714 |
| Tsp45I | GTSAC | 3 cut(s) | 16, 532, 1468 |
| TspRI | CASTG | 6 cut(s) | 1066, 1392, 1755, 2079, 2457, 2602 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1342 |
| VneI | GTGCAC | 1 cut(s) | 86 |
| VpaK11BI | GGWCC | 2 cut(s) | 390, 2237 |
| XapI | RAATTY | 9 cut(s) | 64, 122, 333, 625, 889, 1045, 1722, 2083, 2446 |
| XceI | RCATGY | 3 cut(s) | 1961, 2701, 2714 |
| XmiI | GTMKAC | 3 cut(s) | 874, 1394, 2346 |
| XmnI | GAANNNNTTC | 2 cut(s) | 629, 1673 |
| XspI | CTAG | 9 cut(s) | 116, 648, 698, 870, 1055, 1311, 1538, 2661, 2727 |
| ZrmI | AGTACT | 2 cut(s) | 1356, 1694 |