Prupe.2G223900_v2.0.a1

Cyclic nucleotide-gated ion channel 1-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Forward (+)
25125623 .. 25130054
4432 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G223900.1

Sequence Viewer

Length: 2859 bp
ATGGCCAACCCCGATGTAAGTTTTGTTGTGGAGAAGTCGGAAGAGAAAGCTGCACGTGATTCAGATTCAGACTCAGATTCAAAATCATACTCATGTTCAGACACTACAATTGGAGAATCTTCCATGGAAGAAAGGTCAAGAAAAAAAAGGCCAATGATGATGATAGTGAAAATTCTTGAGCTGTTTCACTGGATCCTTGCAAGGTGGAAGAAGATGTTTGTAACATCATGTGTGTTTGCTGTTTCACTGGATCCTTTGTTCCTCTACATTCCTATCATCGATCAGGATATGAACTGTCTGAGTTTGGACCAAAATCTGAAGATAACAGCTCTCGCATTAAGATCTGTCACAGATCTCTTTTATATTATGGACATCATTATTGAAATTTATACATCTGGGATCTGTTCAAGTTTAACCAATGGATTTCATCACAGCTCCAAATTACAATTCTTGGGGAACACTTTCTTGCCGAAAGTAGCTAAGACGATTTGGCAGTCATACATCTTAATTGATATTTTAGCTATCATTCCCCTTCCACAGGTACTGATTCTCACTTTCTTTTCAAAAATGAGGGCATCGAGATCCTTGGATACAAGGAAGTTCATTATGAACTTTTTTGTTCTGATGCAATATTTTCCACGGGTCATTCGCATATACCTATCGTGTAAGGCACCCAAAATGTCTCACAGGAGAGAGACTCCAGTATGGGTTAAAGGTGTACTGAATTTCTTTATGTACATCCTTGCTAGTCATGTACTTGGAGCCGTATGGTACTTTTTTGCTATTCAACAAATGACAGTTTGTTGGGCATATGCATGTCGAAATGAAAATGGGTGCGACTCTACTACTTTTGGTTGTCATGACCGTACATCCAAAAATGAATTATGCCCTGTAAGTTCACCAAATACAACACTCTTCGAATTTGGGATATTTCTTAGTCTCCTTCAGTCTGGTGTGCCCTCGTCAACAAATTTTCTACAGAAGTTCACAAACTGCTTTTGTTGGGGCCTACGAAATTTGAGTTCTCTTGGTTCTAACCTCCAGCCCAGTACCAACACTTGGGAAAACCTCTTTGTGGTTTTTATTTCTATAATTGGCTTGCTACTGTTTATATATCTCATTGGAAATCTGCAGACATATTTGTCCTTGGACACTACAAGAATAGAGGCGCATAGACACAAGAGGAAAATTAAACGGAAGATGGAAGAGAAAGGTCAAGAGCTAGAATTATGGTTGCCTAAAAATGGCATCCCTGAGAAGTCACATAAGAATATAAAGTTGCAGATCATGGAAAAGGTAGAACAAGAATTTGAAGAAAACAGGGATGTTGATTTAGATAATTTCACCTCTACTCTTCCCTCAGACCTTGAAAACCAGATCAAAAGTTATATGCCGTTCACTAGGTTGAAAATGGTGCGAGTCCTTCAAAACATGGATGAACAAGTGTTGAAAGCAATTTGTCAGCGTCTAAAGCCCATGAAGTATACTGAAGACAATCTCATTCTTCGAGAGGGTGAACCACTTAAAATGATGCTCTTCATTGTGGAAGGACATGTAGCCATTGAAAAGAAAGGTGGTTCTATTTTGAATCAAGGTGCCAGAGAATTATATGGAGAAAAGCTTCTAGCTTGGCCATTCTCGACATCTTTTCCAAAGAAGTTACCCACCGCAACAGAGTCTGCTAGGGCAATTGGTGATGTTGAAGCCCTTATTCTAATGGCCGACGACATGAAGGGTGTAGTCTTTAAATTCGGGGTGCATTTCATCAACAAGTATGGCAAACTCAAAGAAAAATTTGTTGAGGCAACACCAACATCTATTGGAGCAGCACCAGCACTCAGACTCTTTACTGAAAAAGAACTTAAGAAGGCCACACAAAATTACAATGCAAGTGCAAGGATTGGTGAAGGAGGTTATGGAATAGTTTACAAAGGAATACTGCCAGATAAAACAGTTGTTGCCATAAAGAAGTCCAAAATGCATGCCCCAGCCATGAGCGTTAACTCCGTTAATGAGGCGTTTATTCTTTCTCAGATCCACCACAGAAACATCGTGCGGCTTTTAGGTTGTTGTTTAGAGGCAAAAACGAATTTAATGGTTTATGAGTTCATCGACAACGGGACTCTGTCTGAGCACATTCACAACGATAGCAAAGGAGTGAAACTCTCATTTGAATTACGACTGAAGATAGCAGCAGATACTGCAGAAGCACTATCATACGTGCACTCCGTGTCAATCATACACCGAGATGTGAAGACATCAAATTTACTATTGGATCAAAATTACACAATAAAGGTTTCAGACTTTGGAGGTTCACTATTGGTTGATGAAGATCAAGATTCCTTGTCAACTTTAGTGCAAGGGACACTCGGATACTTAGATCCTGAATATCTTACGTCAAACACGCTAACAGAAAAGAGCGATGTCTACAGCTTTGGAGTTGTCCTATTGGAGCTACTAACGAGTCGAAGGGCACTTTCTCCTGAAAGGCCTCAGGAAGAGAGAAACCTAGCAAGCTTCTTTCTTCGTTTAGCGGAACAAGGACACTTAGATCAAATTCTTGATGGTGAAATAATCAACGGGGAAAATTATGTGACGGCCGAAAAAGTAAGCTATCTAGCAAGAAGATGTTTGGCGTTGACAGGGGAGGAAAGGCCGCCTATGAAAGAAGTAGTCATGGAGCTCGAGTGGTTAATTATGGAAACACGTCAAGCAGAAAAGGCTAATTTCTCTCCATCTTCCGAAGAGACTAATAATTGGTTTCTTCAGTCACCTTCAAACTCTTATGTTGTGGATGTTAGAGATGAAGGTGATGATGTTGGTTCTAGTGATATTGTAAAGGATGTGGATGTTAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling

Protein Analysis

953

Amino Acids

108.18

Weight (kDa)

6.48

Isoelectric Point (pI)

43.3

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000017)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07351 FvH4_1g11800 FvH4_1g11800 FvH4_1g11800 FvH4_1g11800 FvH4_1g11800 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_4g14360 FvH4_6g13561 FvH4_6g13562 FvH4_6g13580 FvH4_6g13590 FvH4_6g13590 FvH4_6g13590 FvH4_6g13731 FvH4_6g13770 FvH4_6g13800 FvH4_6g13800 FvH4_6g13860 FvH4_6g13870 FvH4_6g13870 FvH4_6g13870 FvH4_6g13870 FvH4_6g13870 FvH4_6g13890 FvH4_6g33801 FvH4_7g13020 FvH4_7g13270 FvH4_7g13270 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g14580 FvH4_7g14580 FvH4_7g14580 FvH4_7g14600 FvH4_7g14600 FvH4_7g20030 FvH4_7g20510 FvH4_7g20510 FvH4_7g20510 FvH4_7g20670 FvH4_7g20670 FvH4_7g20670 FvH4_7g20670 FvH4_7g20690 FvH4_7g20690 FvH4_7g31930 FvH4_7g31930 FvH4_7g31940 FvH4_7g31940
malus_domestica MD01G1115700.v1.1 MD01G1115800.v1.1 MD01G1116600.v1.1 MD01G1116700.v1.1 MD01G1117000.v1.1 MD01G1225000.v1.1 MD02G1077900.v1.1 MD02G1078000.v1.1 MD02G1078200.v1.1 MD02G1078400.v1.1 MD02G1084300.v1.1 MD04G1004700.v1.1 MD04G1123100.v1.1 MD04G1123200.v1.1 MD04G1128000.v1.1 MD04G1128400.v1.1 MD05G1299700.v1.1 MD05G1300000.v1.1 MD07G1184000.v1.1 MD07G1292300.v1.1 MD08G1214800.v1.1
prunus_persica Prupe.1G205100_v2.0.a1 Prupe.1G205100_v2.0.a1 Prupe.1G205200_v2.0.a1 Prupe.2G222300_v2.0.a1 Prupe.2G223300_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223600_v2.0.a1 Prupe.2G223600_v2.0.a1 Prupe.2G223600_v2.0.a1 Prupe.2G223700_v2.0.a1 Prupe.2G223700_v2.0.a1 Prupe.2G223700_v2.0.a1 Prupe.2G223700_v2.0.a1 Prupe.2G223800_v2.0.a1 Prupe.2G223900_v2.0.a1 Prupe.2G224000_v2.0.a1 Prupe.5G162000_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G291000_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G210400_v2.0.a1 Prupe.7G210600_v2.0.a1 Prupe.7G210700_v2.0.a1 Prupe.7G210800_v2.0.a1 Prupe.7G210900_v2.0.a1 Prupe.8G097600_v2.0.a1 Prupe.8G097800_v2.0.a1 Prupe.8G097800_v2.0.a1
pyrus_communis pycom01g14430 pycom01g14440 pycom01g23130 pycom01g23160 pycom01g23330 pycom02g06210 pycom02g06220 pycom02g06250 pycom02g06270 pycom02g06710 pycom03g05360 pycom03g05380 pycom04g11470 pycom04g11480 pycom04g11520 pycom04g11560 pycom04g11600 pycom04g11610 pycom04g11650 pycom04g11660 pycom04g11670 pycom05g27790 pycom07g17630 pycom08g20960 pycom126g00020 pycom126g00030
rosa_chinensis RchiOBHm_Chr1g0318251 RchiOBHm_Chr1g0318731 RchiOBHm_Chr1g0339101 RchiOBHm_Chr1g0339111 RchiOBHm_Chr1g0347151 RchiOBHm_Chr1g0347161 RchiOBHm_Chr1g0347221 RchiOBHm_Chr1g0352401 RchiOBHm_Chr1g0352441 RchiOBHm_Chr1g0352461 RchiOBHm_Chr1g0356131 RchiOBHm_Chr1g0363991 RchiOBHm_Chr1g0364791 RchiOBHm_Chr1g0364801 RchiOBHm_Chr1g0364811 RchiOBHm_Chr1g0364851 RchiOBHm_Chr1g0364951 RchiOBHm_Chr1g0370821 RchiOBHm_Chr1g0381221 RchiOBHm_Chr1g0381231 RchiOBHm_Chr1g0381261 RchiOBHm_Chr1g0381271 RchiOBHm_Chr1g0381341 RchiOBHm_Chr1g0381351 RchiOBHm_Chr1g0381391 RchiOBHm_Chr1g0381801 RchiOBHm_Chr1g0381821 RchiOBHm_Chr2g0093241 RchiOBHm_Chr2g0116391 RchiOBHm_Chr3g0466441 RchiOBHm_Chr3g0466631 RchiOBHm_Chr3g0466651 RchiOBHm_Chr3g0496921 RchiOBHm_Chr4g0400441 RchiOBHm_Chr4g0400501 RchiOBHm_Chr4g0400511 RchiOBHm_Chr4g0400691 RchiOBHm_Chr4g0400701 RchiOBHm_Chr4g0404331 RchiOBHm_Chr5g0052101 RchiOBHm_Chr5g0052111 RchiOBHm_Chr5g0052171 RchiOBHm_Chr5g0052181 RchiOBHm_Chr6g0264161 RchiOBHm_Chr6g0265551 RchiOBHm_Chr7g0213571 RchiOBHm_Chr7g0213581
rosa_laevigata RLG00000002796 RLG00000003261 RLG00000007935 RLG00000007936 RLG00000009187 RLG00000014179 RLG00000016381 RLG00000018265 RLG00000024558 RLG00000024574 RLG00000026232 RLG00000026234 RLG00000026236 RLG00000026237 RLG00000027459 RLG00000027461 RLG00000027463 RLG00000027530 RLG00000028103 RLG00000028304 RLG00000028333 RLG00000029214 RLG00000029848 RLG00000029951 RLG00000030115 RLG00000030552 RLG00000033668 RLG00000034840 RLG00000034841 RLG00000034842 RLG00000035830
rosa_multiflora Rmu_sc0000654.1_g000004 Rmu_sc0000675.1_g000025 Rmu_sc0001075.1_g000002 Rmu_sc0001726.1_g000004 Rmu_sc0001772.1_g000061 Rmu_sc0001772.1_g000065 Rmu_sc0002067.1_g000002 Rmu_sc0002183.1_g000001 Rmu_sc0002183.1_g000006 Rmu_sc0002244.1_g000003 Rmu_sc0002313.1_g000004 Rmu_sc0002319.1_g000004 Rmu_sc0002539.1_g000085 Rmu_sc0002636.1_g000004 Rmu_sc0003229.1_g000007 Rmu_sc0003313.1_g000020 Rmu_sc0003546.1_g000007 Rmu_sc0003724.1_g000015 Rmu_sc0003936.1_g000029 Rmu_sc0004191.1_g000067 Rmu_sc0004525.1_g000012 Rmu_sc0005122.1_g000009 Rmu_sc0005255.1_g000040 Rmu_sc0005338.1_g000016 Rmu_sc0005584.1_g000008 Rmu_sc0006460.1_g000013 Rmu_sc0006872.1_g000011 Rmu_sc0006872.1_g000015 Rmu_sc0006872.1_g000016 Rmu_sc0006952.1_g000013 Rmu_sc0007342.1_g000005 Rmu_sc0007342.1_g000006 Rmu_sc0008418.1_g000003 Rmu_sc0008418.1_g000006 Rmu_sc0008636.1_g000007 Rmu_sc0008636.1_g000008 Rmu_sc0009205.1_g000014 Rmu_sc0009365.1_g000014 Rmu_sc0009917.1_g000002 Rmu_sc0019289.1_g000003 Rmu_ssc0000098.1_g000011 Rmu_ssc0000098.1_g000012 Rmu_ssc0000167.1_g000018 Rmu_ssc0000167.1_g000024 Rmu_ssc0000326.1_g000015
rosa_roxburghii Rroxscaffold_166G00440780 Rroxscaffold_176G00431500 Rroxscaffold_1G00015080 Rroxscaffold_1G00027880 Rroxscaffold_1G00027890 Rroxscaffold_1G00027920 Rroxscaffold_2G00127250 Rroxscaffold_2G00148380 Rroxscaffold_3G00219450 Rroxscaffold_3G00232170 Rroxscaffold_3G00232210 Rroxscaffold_3G00242230 Rroxscaffold_3G00242240 Rroxscaffold_3G00244790 Rroxscaffold_3G00245790 Rroxscaffold_4G00278400 Rroxscaffold_4G00278430 Rroxscaffold_4G00278670 Rroxscaffold_4G00278680 Rroxscaffold_4G00278690 Rroxscaffold_4G00278700 Rroxscaffold_4G00278720 Rroxscaffold_4G00291690 Rroxscaffold_4G00292070 Rroxscaffold_4G00292090 Rroxscaffold_4G00292770 Rroxscaffold_4G00302240 Rroxscaffold_4G00302860 Rroxscaffold_4G00311320 Rroxscaffold_4G00311330 Rroxscaffold_4G00320570 Rroxscaffold_4G00322050 Rroxscaffold_4G00329480 Rroxscaffold_4G00329730 Rroxscaffold_5G00345500 Rroxscaffold_5G00345510 Rroxscaffold_5G00360830 Rroxscaffold_5G00360840 Rroxscaffold_6G00393450 Rroxscaffold_6G00404030 Rroxscaffold_6G00414220 Rroxscaffold_6G00414230 Rroxscaffold_6G00414280 Rroxscaffold_6G00414290 Rroxscaffold_6G00414350 Rroxscaffold_6G00414470 Rroxscaffold_7G00202570 Rroxscaffold_7G00203460 Rroxscaffold_7G00203470
rosa_rugosa Rorug01G0020500 Rorug01G0020600 Rorug01G0020700 Rorug01G0143700.1 Rorug01G0225700 Rorug01G0228500 Rorug01G0228600 Rorug01G0228600 Rorug01G0228700 Rorug01G0228800 Rorug01G0228800 Rorug01G0229000 Rorug01G0229300 Rorug01G0229400 Rorug01G0229600 Rorug01G0229700 Rorug01G0232200 Rorug01G0232600 Rorug01G0232600 Rorug01G0311900 Rorug01G0311900 Rorug01G0318400 Rorug01G0318500 Rorug01G0318500 Rorug01G0318500 Rorug01G0427900 Rorug01G0427900 Rorug01G0428000 Rorug01G0428200 Rorug01G0428300 Rorug01G0428400 Rorug01G0431500 Rorug01G0431600 Rorug01G0431600 Rorug02G0033800 Rorug02G0206300 Rorug03G0081900 Rorug03G0083200 Rorug03G0083200 Rorug03G0083300 Rorug04G0025100 Rorug04G0025100 Rorug04G0025200 Rorug04G0025300 Rorug04G0058600 Rorug04G0058700 Rorug04G0058800 Rorug04G0098400 Rorug04G0098500 Rorug05G0274500 Rorug05G0274600 Rorug05G0274800 Rorug06G0008500 Rorug06G0009100 Rorug06G0018000
rosa_samantha Rh1AG031700 Rh1AG036100 Rh1AG089800 Rh1AG239800 Rh1AG239900 Rh1AG242000 Rh1AG242300 Rh1AG245600 Rh1AG262600 Rh1AG319700 Rh1AG319800 Rh1AG319900 Rh1AG327200 Rh1AG451100 Rh1AG451200 Rh1AG451300 Rh1AG451600 Rh1AG451700 Rh1BG027200 Rh1BG071600 Rh1BG090700 Rh1BG211000 Rh1BG213000 Rh1BG213500 Rh1BG282800 Rh1BG288400 Rh1BG408100 Rh1BG408200 Rh1BG408400 Rh1BG408700 Rh1CG026300 Rh1CG028300 Rh1CG224100 Rh1CG226000 Rh1CG226100 Rh1CG229300 Rh1CG229400 Rh1CG245900 Rh1CG299200 Rh1CG299400 Rh1CG299500 Rh1CG303300 Rh1CG305100 Rh1CG422500 Rh1CG422600 Rh1CG422700 Rh1CG422800 Rh1CG422900 Rh1CG423100 Rh1CG423300 Rh1CG423400 Rh1CG426300 Rh1CG426600 Rh1DG239300 Rh1DG239600 Rh1DG258300 Rh1DG314200 Rh1DG314300 Rh1DG314400 Rh1DG320000 Rh1DG439200 Rh1DG439400 Rh1DG439500 Rh1DG439700 Rh1DG440000 Rh1DG443800 Rh2AG261800 Rh2BG080900 Rh2CG083300 Rh2DG078900 Rh2DG270000 Rh2DG270100 Rh3AG128400 Rh3AG130100 Rh3AG130500 Rh3AG332500 Rh3AG332600 Rh3AG332800 Rh3BG149700 Rh3BG151500 Rh3CG151400 Rh3CG354500 Rh3CG366800 Rh3DG150500 Rh3DG152200 Rh4AG101400 Rh4AG102900 Rh4AG148300 Rh4AG148600 Rh4BG098000 Rh4CG111100 Rh4CG111300 Rh4CG155100 Rh4DG094800 Rh5AG213600 Rh5AG346900 Rh5AG347000 Rh5BG357500 Rh5BG357700 Rh5BG485400 Rh5CG383100 Rh5CG383200 Rh5CG383300 Rh5CG509900 Rh5DG373000 Rh5DG373200 Rh6BG054300 Rh6BG126300 Rh6CG125100 Rh6CG185300 Rh6DG177000 Rh7AG276100 Rh7AG276200 Rh7BG230500 Rh7BG270500 Rh7BG364000 Rh7CG250100 Rh7CG295200 Rh7CG295300 Rh7DG389700
rosa_wichuraiana Rw0G001190 Rw0G010680 Rw0G013360 Rw0G014310 Rw0G014890 Rw0G020310 Rw0G021350 Rw0G022510 Rw1G003360 Rw1G004330 Rw1G006930 Rw1G008310 Rw1G021090 Rw1G021150 Rw1G021210 Rw1G023200 Rw1G023210 Rw1G028340 Rw1G028350 Rw1G028990 Rw1G032510 Rw1G039370 Rw1G039400 Rw1G039410 Rw1G039420 Rw1G039430 Rw2G006700 Rw2G020550 Rw2G020580 Rw3G012130 Rw3G012300 Rw3G012310 Rw3G028220 Rw3G029230 Rw5G021600 Rw5G032790 Rw6G011240 Rw7G027670 Rw7G032780

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1141
AccB1I GGYRCC 2 cut(s) 670, 1595
AccB7I CCANNNNNTGG 1 cut(s) 1059
AccI GTMKAC 2 cut(s) 1484, 2427
AciI CCGC 4 cut(s) 1668, 2056, 2534, 2657
AclWI GGATC 9 cut(s) 187, 200, 245, 258, 407, 576, 2029, 2283, 2375
AcoI YGGCCR 4 cut(s) 3, 1631, 1719, 2598
AcuI CTGAAG 5 cut(s) 338, 929, 1509, 2204, 2750
AcvI CACGTG 1 cut(s) 56
AdeI CACNNNGTG 1 cut(s) 2230
AfaI GTAC 7 cut(s) 543, 720, 737, 756, 773, 868, 1051
AfiI CCNNNNNNNGG 4 cut(s) 538, 1059, 1075, 1244
AflII CTTAAG 1 cut(s) 1862
AflIII ACRYGT 2 cut(s) 1552, 2705
AjiI CACGTC 1 cut(s) 2708
AjuI GAANNNNNNNTTGG 2 cut(s) 431, 463
AloI GAACNNNNNNTCC 2 cut(s) 242, 274
Alw21I GWGCWC 3 cut(s) 2136, 2226, 2685
Alw26I GTCTC 4 cut(s) 687, 689, 944, 2741
Alw44I GTGCAC 1 cut(s) 2222
AlwI GGATC 9 cut(s) 187, 200, 245, 258, 407, 576, 2029, 2283, 2375
AlwNI CAGNNNCTG 3 cut(s) 544, 1679, 2201
Ama87I CYCGRG 1 cut(s) 2684
AoxI GGCC 9 cut(s) 3, 149, 1006, 1631, 1719, 1869, 2489, 2598, 2654
ApaLI GTGCAC 1 cut(s) 2222
ApeKI GCWGC 3 cut(s) 50, 1826, 2192
Asp700I GAANNNNTTC 2 cut(s) 461, 1620
AspLEI GCGC 1 cut(s) 1171
AspS9I GGNCC 2 cut(s) 307, 1006
AsuHPI GGTGA 8 cut(s) 891, 1336, 1526, 1706, 1916, 2579, 2763, 2822
AsuII TTCGAA 1 cut(s) 918
AvaI CYCGRG 1 cut(s) 2684
AvaII GGWCC 1 cut(s) 307
AxyI CCTNAGG 1 cut(s) 2493
BaeGI GKGCMC 3 cut(s) 960, 2226, 2476
BalI TGGCCA 2 cut(s) 5, 1633
BamHI GGATCC 2 cut(s) 192, 250
BanI GGYRCC 2 cut(s) 670, 1595
BanII GRGCYC 1 cut(s) 2685
BbrPI CACGTG 1 cut(s) 56
BbsI GAAGAC 2 cut(s) 1497, 2261
Bbv12I GWGCWC 3 cut(s) 2136, 2226, 2685
BbvI GCAGC 3 cut(s) 37, 1838, 2204
BccI CCATC 3 cut(s) 1195, 2558, 2743
BceAI ACGGC 3 cut(s) 749, 1378, 2613
BciVI GTATCC 2 cut(s) 583, 2366
BcoDI GTCTC 4 cut(s) 687, 689, 944, 2741
BfaI CTAG 8 cut(s) 747, 1223, 1401, 1625, 1683, 2510, 2618, 2826
BfmI CTRYAG 4 cut(s) 977, 1130, 2202, 2428
BfrI CTTAAG 1 cut(s) 1862
BfuI GTATCC 2 cut(s) 583, 2366
BglII AGATCT 2 cut(s) 341, 352
BisI GCNGC 5 cut(s) 51, 1827, 2057, 2193, 2657
BlsI GCNGC 5 cut(s) 52, 1828, 2058, 2194, 2658
Bme18I GGWCC 1 cut(s) 307
BmeT110I CYCGRG 1 cut(s) 2684
BmgBI CACGTC 1 cut(s) 2708
BmgT120I GGNCC 2 cut(s) 307, 1006
BmiI GGNNCC 6 cut(s) 194, 252, 672, 763, 1007, 1597
BmrI ACTGGG 1 cut(s) 1041
BmsI GCATC 4 cut(s) 584, 615, 1257, 1521
BmuI ACTGGG 1 cut(s) 1041
BpiI GAAGAC 2 cut(s) 1497, 2261
BplI GAGNNNNNCTC 4 cut(s) 682, 714, 2148, 2180
BpmI CTGGAG 2 cut(s) 684, 1025
Bpu14I TTCGAA 1 cut(s) 918
BpuEI CTTGAG 1 cut(s) 197
Bsa29I ATCGAT 1 cut(s) 279
BsaAI YACGTR 2 cut(s) 56, 2221
BsaBI GATNNNNATC 1 cut(s) 2331
BsaJI CCNNGG 4 cut(s) 123, 585, 638, 1146
BsaXI ACNNNNNCTCC 4 cut(s) 2210, 2240, 2672, 2702
Bsc4I CCNNNNNNNGG 4 cut(s) 538, 1059, 1075, 1244
Bse1I ACTGG 4 cut(s) 194, 252, 701, 1047
Bse21I CCTNAGG 1 cut(s) 2493
Bse8I GATNNNNATC 1 cut(s) 2331
BseCI ATCGAT 1 cut(s) 279
BseDI CCNNGG 4 cut(s) 123, 585, 638, 1146
BseGI GGATG 8 cut(s) 738, 869, 1248, 1330, 1441, 2800, 2848, 2854
BseJI GATNNNNATC 1 cut(s) 2331
BseLI CCNNNNNNNGG 4 cut(s) 538, 1059, 1075, 1244
BseMII CTCAG 8 cut(s) 87, 290, 1245, 1374, 1852, 2045, 2121, 2507
BseNI ACTGG 4 cut(s) 194, 252, 701, 1047
BseSI GKGCMC 3 cut(s) 960, 2226, 2476
BseX3I CGGCCG 1 cut(s) 2598
BseXI GCAGC 3 cut(s) 37, 1838, 2204
BseYI CCCAGC 1 cut(s) 1987
BsgI GTGCAG 1 cut(s) 36
Bsh1285I CGRYCG 1 cut(s) 2601
BshFI GGCC 9 cut(s) 5, 151, 1008, 1633, 1721, 1871, 2491, 2600, 2656
BshNI GGYRCC 2 cut(s) 670, 1595
BshVI ATCGAT 1 cut(s) 279
BsiEI CGRYCG 1 cut(s) 2601
BsiHKAI GWGCWC 3 cut(s) 2136, 2226, 2685
BsiHKCI CYCGRG 1 cut(s) 2684
BslFI GGGAC 2 cut(s) 2134, 2377
BslI CCNNNNNNNGG 4 cut(s) 538, 1059, 1075, 1244
BsmAI GTCTC 4 cut(s) 687, 689, 944, 2741
BsmFI GGGAC 2 cut(s) 2134, 2377
BsnI GGCC 9 cut(s) 5, 151, 1008, 1633, 1721, 1871, 2491, 2600, 2656
BsoBI CYCGRG 1 cut(s) 2684
Bsp119I TTCGAA 1 cut(s) 918
Bsp1286I GDGCHC 5 cut(s) 960, 2136, 2226, 2476, 2685
Bsp1407I TGTACA 1 cut(s) 735
Bsp19I CCATGG 1 cut(s) 123
BspACI CCGC 4 cut(s) 1668, 2056, 2534, 2657
BspANI GGCC 9 cut(s) 5, 151, 1008, 1633, 1721, 1871, 2491, 2600, 2656
BspCNI CTCAG 8 cut(s) 86, 291, 1246, 1373, 1851, 2044, 2122, 2506
BspDI ATCGAT 1 cut(s) 279
BspHI TCATGA 1 cut(s) 859
BspLI GGNNCC 6 cut(s) 194, 252, 672, 763, 1007, 1597
BspMAI CTGCAG 2 cut(s) 1134, 2206
BspPI GGATC 9 cut(s) 187, 200, 245, 258, 407, 576, 2029, 2283, 2375
BspQI GCTCTTC 1 cut(s) 1541
BspT104I TTCGAA 1 cut(s) 918
BspT107I GGYRCC 2 cut(s) 670, 1595
BspTI CTTAAG 1 cut(s) 1862
BsrGI TGTACA 1 cut(s) 735
BsrI ACTGG 4 cut(s) 194, 252, 701, 1047
BssECI CCNNGG 4 cut(s) 123, 585, 638, 1146
BssNAI GTATAC 1 cut(s) 1485
BssT1I CCWWGG 3 cut(s) 123, 585, 1146
Bst1107I GTATAC 1 cut(s) 1485
Bst4CI ACNGT 5 cut(s) 296, 799, 866, 1107, 1954
Bst6I CTCTTC 7 cut(s) 36, 920, 1200, 1359, 1541, 2493, 2739
BstAFI CTTAAG 1 cut(s) 1862
BstAPI GCANNNNNTGC 1 cut(s) 2201
BstAUI TGTACA 1 cut(s) 735
BstBAI YACGTR 2 cut(s) 56, 2221
BstBI TTCGAA 1 cut(s) 918
BstC8I GCNNGC 3 cut(s) 1100, 1983, 2515
BstDSI CCRYGG 2 cut(s) 123, 638
BstENI CCTNNNNNAGG 1 cut(s) 536
BstF5I GGATG 8 cut(s) 738, 869, 1248, 1330, 1441, 2800, 2848, 2854
BstHHI GCGC 1 cut(s) 1171
BstMAI GTCTC 4 cut(s) 687, 689, 944, 2741
BstMCI CGRYCG 1 cut(s) 2601
BstMWI GCNNNNNNNGC 4 cut(s) 1471, 1832, 2201, 2720
BstNSI RCATGY 3 cut(s) 819, 1556, 1985
BstSFI CTRYAG 4 cut(s) 977, 1130, 2202, 2428
BstSLI GKGCMC 3 cut(s) 960, 2226, 2476
BstV1I GCAGC 3 cut(s) 37, 1838, 2204
BstV2I GAAGAC 2 cut(s) 1497, 2261
BstX2I RGATCY 8 cut(s) 192, 250, 341, 352, 399, 581, 2034, 2380
BstYI RGATCY 8 cut(s) 192, 250, 341, 352, 399, 581, 2034, 2380
BstZ17I GTATAC 1 cut(s) 1485
BstZI CGGCCG 1 cut(s) 2598
Bsu15I ATCGAT 1 cut(s) 279
Bsu36I CCTNAGG 1 cut(s) 2493
BsuI GTATCC 2 cut(s) 583, 2366
BsuRI GGCC 9 cut(s) 5, 151, 1008, 1633, 1721, 1871, 2491, 2600, 2656
BsuTUI ATCGAT 1 cut(s) 279
BtgI CCRYGG 2 cut(s) 123, 638
BtgZI GCGATG 1 cut(s) 2436
BtrI CACGTC 1 cut(s) 2708
BtsCI GGATG 8 cut(s) 738, 869, 1248, 1330, 1441, 2800, 2848, 2854
BtsIMutI CAGTG 2 cut(s) 187, 245
Cac8I GCNNGC 3 cut(s) 1100, 1983, 2515
CaiI CAGNNNCTG 3 cut(s) 544, 1679, 2201
CciI TCATGA 1 cut(s) 859
CfoI GCGC 1 cut(s) 1171
Cfr13I GGNCC 2 cut(s) 307, 1006
ClaI ATCGAT 1 cut(s) 279
CseI GACGC 1 cut(s) 1454
Csp6I GTAC 7 cut(s) 542, 719, 736, 755, 772, 867, 1050
CviQI GTAC 7 cut(s) 542, 719, 736, 755, 772, 867, 1050
DraI TTTAAA 1 cut(s) 1747
DraIII CACNNNGTG 1 cut(s) 2230
DrdI GACNNNNNNGTC 1 cut(s) 1141
DseDI GACNNNNNNGTC 1 cut(s) 1141
EaeI YGGCCR 4 cut(s) 3, 1631, 1719, 2598
EagI CGGCCG 1 cut(s) 2598
Eam1104I CTCTTC 7 cut(s) 36, 920, 1200, 1359, 1541, 2493, 2739
EarI CTCTTC 7 cut(s) 36, 920, 1200, 1359, 1541, 2493, 2739
Ecl136II GAGCTC 1 cut(s) 2683
EclXI CGGCCG 1 cut(s) 2598
Eco130I CCWWGG 3 cut(s) 123, 585, 1146
Eco147I AGGCCT 1 cut(s) 2491
Eco24I GRGCYC 1 cut(s) 2685
Eco47I GGWCC 1 cut(s) 307
Eco52I CGGCCG 1 cut(s) 2598
Eco53kI GAGCTC 1 cut(s) 2683
Eco57I CTGAAG 5 cut(s) 338, 929, 1509, 2204, 2750
Eco72I CACGTG 1 cut(s) 56
Eco81I CCTNAGG 1 cut(s) 2493
Eco88I CYCGRG 1 cut(s) 2684
EcoICRI GAGCTC 1 cut(s) 2683
EcoNI CCTNNNNNAGG 1 cut(s) 536
EcoO109I RGGNCCY 1 cut(s) 1006
EcoT14I CCWWGG 3 cut(s) 123, 585, 1146
EcoT22I ATGCAT 2 cut(s) 817, 1983
EcoT38I GRGCYC 1 cut(s) 2685
ErhI CCWWGG 3 cut(s) 123, 585, 1146
FaqI GGGAC 2 cut(s) 2134, 2377
FauNDI CATATG 1 cut(s) 811
FblI GTMKAC 2 cut(s) 1484, 2427
Fnu4HI GCNGC 5 cut(s) 51, 1827, 2057, 2193, 2657
FokI GGATG 7 cut(s) 725, 856, 1235, 1337, 1448, 2807, 2855
FriOI GRGCYC 1 cut(s) 2685
Fsp4HI GCNGC 5 cut(s) 51, 1827, 2057, 2193, 2657
FspBI CTAG 8 cut(s) 747, 1223, 1401, 1625, 1683, 2510, 2618, 2826
GlaI GCGC 1 cut(s) 1170
GluI GCNGC 5 cut(s) 51, 1827, 2057, 2193, 2657
GsaI CCCAGC 1 cut(s) 1991
GsuI CTGGAG 2 cut(s) 684, 1025
HaeIII GGCC 9 cut(s) 5, 151, 1008, 1633, 1721, 1871, 2491, 2600, 2656
HgaI GACGC 1 cut(s) 1454
HhaI GCGC 1 cut(s) 1171
Hin6I GCGC 1 cut(s) 1169
HinP1I GCGC 1 cut(s) 1169
HincII GTYRAC 4 cut(s) 966, 2002, 2349, 2640
HindII GTYRAC 4 cut(s) 966, 2002, 2349, 2640
HindIII AAGCTT 2 cut(s) 1619, 2515
HpaI GTTAAC 1 cut(s) 2002
HphI GGTGA 8 cut(s) 891, 1336, 1526, 1706, 1916, 2579, 2763, 2822
Hpy99I CGWCG 1 cut(s) 1727
HpyCH4III ACNGT 5 cut(s) 296, 799, 866, 1107, 1954
HpyCH4IV ACGT 4 cut(s) 55, 2220, 2396, 2707
HpyF10VI GCNNNNNNNGC 4 cut(s) 1471, 1832, 2201, 2720
HpySE526I ACGT 4 cut(s) 55, 2220, 2396, 2707
HspAI GCGC 1 cut(s) 1169
KspAI GTTAAC 1 cut(s) 2002
LguI GCTCTTC 1 cut(s) 1541
LmnI GCTCC 5 cut(s) 440, 761, 1823, 2452, 2680
Lsp1109I GCAGC 3 cut(s) 37, 1838, 2204
LweI GCATC 4 cut(s) 584, 615, 1257, 1521
MaeI CTAG 8 cut(s) 747, 1223, 1401, 1625, 1683, 2510, 2618, 2826
MaeII ACGT 4 cut(s) 55, 2220, 2396, 2707
MaeIII GTNAC 6 cut(s) 220, 346, 1260, 1659, 2593, 2769
MfeI CAATTG 2 cut(s) 108, 1689
MflI RGATCY 8 cut(s) 192, 250, 341, 352, 399, 581, 2034, 2380
MhlI GDGCHC 5 cut(s) 960, 2136, 2226, 2476, 2685
MlsI TGGCCA 2 cut(s) 5, 1633
MluNI TGGCCA 2 cut(s) 5, 1633
MlyI GAGTC 8 cut(s) 65, 691, 833, 1428, 1685, 1836, 2116, 2473
MmeI TCCRAC 1 cut(s) 18
Mox20I TGGCCA 2 cut(s) 5, 1633
Mph1103I ATGCAT 2 cut(s) 817, 1983
MroXI GAANNNNTTC 2 cut(s) 461, 1620
MscI TGGCCA 2 cut(s) 5, 1633
MslI CAYNNNNRTG 3 cut(s) 91, 814, 2247
Msp20I TGGCCA 2 cut(s) 5, 1633
MspCI CTTAAG 1 cut(s) 1862
MunI CAATTG 2 cut(s) 108, 1689
MwoI GCNNNNNNNGC 4 cut(s) 1471, 1832, 2201, 2720
NcoI CCATGG 1 cut(s) 123
NdeI CATATG 1 cut(s) 811
NlaIV GGNNCC 6 cut(s) 194, 252, 672, 763, 1007, 1597
NmuCI GTSAC 4 cut(s) 346, 1260, 2593, 2769
NsiI ATGCAT 2 cut(s) 817, 1983
NspI RCATGY 3 cut(s) 819, 1556, 1985
NspV TTCGAA 1 cut(s) 918
PaeI GCATGC 1 cut(s) 1985
PaeR7I CTCGAG 1 cut(s) 2684
PagI TCATGA 1 cut(s) 859
PceI AGGCCT 1 cut(s) 2491
PciI ACATGT 1 cut(s) 1552
PciSI GCTCTTC 1 cut(s) 1541
PcsI WCGNNNNNNNCGW 1 cut(s) 2226
PdmI GAANNNNTTC 2 cut(s) 461, 1620
PfeI GAWTC 7 cut(s) 59, 65, 77, 116, 547, 1588, 2339
PflFI GACNNNGTC 1 cut(s) 2125
PflMI CCANNNNNTGG 1 cut(s) 1059
PkrI GCNGC 5 cut(s) 52, 1828, 2058, 2194, 2658
PleI GAGTC 8 cut(s) 65, 691, 833, 1427, 1684, 1836, 2116, 2472
PmaCI CACGTG 1 cut(s) 56
PmlI CACGTG 1 cut(s) 56
PpsI GAGTC 8 cut(s) 65, 691, 833, 1427, 1684, 1836, 2116, 2472
Ppu21I YACGTR 2 cut(s) 56, 2221
PscI ACATGT 1 cut(s) 1552
Psp124BI GAGCTC 1 cut(s) 2685
PspCI CACGTG 1 cut(s) 56
PspFI CCCAGC 1 cut(s) 1987
PspN4I GGNNCC 6 cut(s) 194, 252, 672, 763, 1007, 1597
PspPI GGNCC 2 cut(s) 307, 1006
PspXI VCTCGAGB 1 cut(s) 2684
PstI CTGCAG 2 cut(s) 1134, 2206
PstNI CAGNNNCTG 3 cut(s) 544, 1679, 2201
PsuI RGATCY 8 cut(s) 192, 250, 341, 352, 399, 581, 2034, 2380
PsyI GACNNNGTC 1 cut(s) 2125
RsaI GTAC 7 cut(s) 543, 720, 737, 756, 773, 868, 1051
RsaNI GTAC 7 cut(s) 542, 719, 736, 755, 772, 867, 1050
RseI CAYNNNNRTG 3 cut(s) 91, 814, 2247
SacI GAGCTC 1 cut(s) 2685
SapI GCTCTTC 1 cut(s) 1541
SatI GCNGC 5 cut(s) 51, 1827, 2057, 2193, 2657
Sau96I GGNCC 2 cut(s) 307, 1006
SchI GAGTC 8 cut(s) 65, 691, 833, 1428, 1685, 1836, 2116, 2473
SduI GDGCHC 5 cut(s) 960, 2136, 2226, 2476, 2685
SfaNI GCATC 4 cut(s) 584, 615, 1257, 1521
SfcI CTRYAG 4 cut(s) 977, 1130, 2202, 2428
Sfr274I CTCGAG 1 cut(s) 2684
SfuI TTCGAA 1 cut(s) 918
SinI GGWCC 1 cut(s) 307
SlaI CTCGAG 1 cut(s) 2684
SmiMI CAYNNNNRTG 3 cut(s) 91, 814, 2247
SmlI CTYRAG 3 cut(s) 176, 1862, 2684
SmoI CTYRAG 3 cut(s) 176, 1862, 2684
SphI GCATGC 1 cut(s) 1985
SseBI AGGCCT 1 cut(s) 2491
SsiI CCGC 4 cut(s) 1668, 2056, 2534, 2657
SspI AATATT 1 cut(s) 632
SspMI CTAG 8 cut(s) 747, 1223, 1401, 1625, 1683, 2510, 2618, 2826
SstI GAGCTC 1 cut(s) 2685
StuI AGGCCT 1 cut(s) 2491
StyI CCWWGG 3 cut(s) 123, 585, 1146
TaaI ACNGT 5 cut(s) 296, 799, 866, 1107, 1954
TaiI ACGT 4 cut(s) 58, 2223, 2399, 2710
TaqI TCGA 9 cut(s) 279, 578, 820, 918, 1507, 1640, 2112, 2467, 2685
TatI WGTACW 3 cut(s) 718, 735, 754
TauI GCSGC 2 cut(s) 2059, 2659
TfiI GAWTC 7 cut(s) 59, 65, 77, 116, 547, 1588, 2339
TscAI CASTG 2 cut(s) 194, 252
TseFI GTSAC 4 cut(s) 346, 1260, 2593, 2769
TseI GCWGC 3 cut(s) 50, 1826, 2192
Tsp45I GTSAC 4 cut(s) 346, 1260, 2593, 2769
TspGWI ACGGA 3 cut(s) 1210, 1996, 2218
TspRI CASTG 2 cut(s) 194, 252
Tth111I GACNNNGTC 1 cut(s) 2125
Van91I CCANNNNNTGG 1 cut(s) 1059
Vha464I CTTAAG 1 cut(s) 1862
VneI GTGCAC 1 cut(s) 2222
VpaK11BI GGWCC 1 cut(s) 307
XagI CCTNNNNNAGG 1 cut(s) 536
XceI RCATGY 3 cut(s) 819, 1556, 1985
XhoI CTCGAG 1 cut(s) 2684
XmiI GTMKAC 2 cut(s) 1484, 2427
XmnI GAANNNNTTC 2 cut(s) 461, 1620
XspI CTAG 8 cut(s) 747, 1223, 1401, 1625, 1683, 2510, 2618, 2826
Zsp2I ATGCAT 2 cut(s) 817, 1983
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.