Rh4AG102900

Cyclic nucleotide-gated ion channel 1-like

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4A
Physical Location & Seq
Forward (+)
21944762 .. 21959667
14906 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4AG102900.1

Sequence Viewer

Length: 1935 bp
ATGAGCAACCAAGTCGACAACGTATTAATTGACTTACGAAATTTAGATGGAGTCAATTTATTGGAGGAGTCTGACAAAAAAAATGGAGGGCAAAGAAGCACCAGTGCAGAAGGGCCAGCAGTACAGGAAATTATCAAAGCACGAGCTAAGAGAATGTACAAGTGGAATACATTCTTCATTATTATGTGTTCATTTGCAGTCTTCGTCGATCCTTTGTTCTGCTATCTCAATGTCTTTGACGAAGACAATATGTGCTTCAATAACGACTGGAAATTGCTGCTCACATATGTTTGTTTACGAATAGTCGTTGATGTATTTTATGCTGTTGACATAATCATTTTCTTGTGCGGAGCTTTTAAGAAACGTAAGGGTAAGAAACTTTGGGCATGCTGGAAGTCAAGAAATGATCAAAAGACAGTAGTTCCTTGGAAACAAGTAATCAAAATATACTCTGTTTTGTTATCCATTCTACCTGGTGCATTGGTTGCCTTTCCCATTCTAGAGGTACTACTTTTACTCTTTTTATTCGGGACATACTGGGATCCTATTTATGTTGTTTTCATTGTCGTGCCCATTCAATACGTGCTACGGATCTTTCTTATCTATGGATCACAAAGGTGGCGTCTTATGAAAAAGACTGCAGCAGGAAGATGGCTGAAACCTTTGTTGGATTTTCTGCCTTTCGTCCTTGCTTCTCATCTATTTGGAGCCTTGTGGTATCGTCTTGCTGTACAAAGACAAATAGATTGTTGGAAGACAAATTCTAAAATTATTCGAGGAACTACAATTGAATATTGGAATCGATTTGAATGTGCTACGGCTAAATCGTCATTTAACAGCTCGTCATTGAACAGCTCGCTATTGCAAGAATTTTGCCCTACAAAAGATGAAAATTCAAAAGTCTTTGACTTTGGTATATATTTTTATGCTCTTCATTCTAATGTGACAAATTCATCAAGTCTTTCACGAAGAATGTCACTATCTTTTTGGTGGGCGCTTCGAAATTTAAGTTCTTTTGGTTCAAACCTGCTTACCAGCATGCAAATCTGGGAGATCATCTTTTCGATGGCGATATCTATATGTGGCATGGTGCTATTTTTAGTATATCTTAACGCAAGAGAATCACAAGAACGATCACATCAGCTTAAACTGAAGGAAAAGAAGCATTTGATGAAACCAGATATAGATTTGTGGTTATCTAAAAATGATCTCTCAAAGTTGAAGACAGTGACAAAGAGCTCTAAGGATTTGCAGACAACGAACCTAAAGGAAAAAGCTCTCAAGACGGTGATTCTTGAAAACATACACAAACTTGAAGAAAACAAAGATATTGATGTGCAGAATATCATTTCTATTCTTCCCATACAGTACAAAAAAAGCGTCACGCGCCTTCTTTGTTTGGCTTCACTAAAGAAAGTGCCAATGCTTGAGAATTTGAATGAGAAAATGTTGAAAGTGATTTGTGAGCATCTAAAGCCAGTCATTTACATAGAAGACAACTACATCATTCAAGAGGGGAAACCACTCGGGATGACACTCTTCATCACGCAAGGCATCGCATGGACTTACACAGTTAGTAATAACGTTGGTGCAGAAACAAGTTGTGGTTCTTCAAGCAATAAATGGTTAAAGCGAGGTGATTATTATGGAGAAGAGCTTTTGAAGTGGGCATTCAAATGCCCCTCTTATTCTGACTTACCCATCTCAACTAGAACTGTTATGTCCCAAGAAAGGGTCGAAGCATTTGCTCTTAGGGCTAGCGACCTAAAAAGCATTGTATCAAAGTATTGGTGGCATTTTACTAGGGAGCTACCTCAGGTAGAGCTCAAGCAATGGGAGAATTCAGCAACTTCTTCTATACAAGCAGCCTGGCGCAGCCGTCTGGCAAGAGCTAGGCACTCAAATGGCTGGGACAAATTTACAGTAGAGCACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

644

Amino Acids

74.67

Weight (kDa)

9.36

Isoelectric Point (pI)

38.61

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000017)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07351 FvH4_1g11800 FvH4_1g11800 FvH4_1g11800 FvH4_1g11800 FvH4_1g11800 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_4g14360 FvH4_6g13561 FvH4_6g13562 FvH4_6g13580 FvH4_6g13590 FvH4_6g13590 FvH4_6g13590 FvH4_6g13731 FvH4_6g13770 FvH4_6g13800 FvH4_6g13800 FvH4_6g13860 FvH4_6g13870 FvH4_6g13870 FvH4_6g13870 FvH4_6g13870 FvH4_6g13870 FvH4_6g13890 FvH4_6g33801 FvH4_7g13020 FvH4_7g13270 FvH4_7g13270 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g14580 FvH4_7g14580 FvH4_7g14580 FvH4_7g14600 FvH4_7g14600 FvH4_7g20030 FvH4_7g20510 FvH4_7g20510 FvH4_7g20510 FvH4_7g20670 FvH4_7g20670 FvH4_7g20670 FvH4_7g20670 FvH4_7g20690 FvH4_7g20690 FvH4_7g31930 FvH4_7g31930 FvH4_7g31940 FvH4_7g31940
malus_domestica MD01G1115700.v1.1 MD01G1115800.v1.1 MD01G1116600.v1.1 MD01G1116700.v1.1 MD01G1117000.v1.1 MD01G1225000.v1.1 MD02G1077900.v1.1 MD02G1078000.v1.1 MD02G1078200.v1.1 MD02G1078400.v1.1 MD02G1084300.v1.1 MD04G1004700.v1.1 MD04G1123100.v1.1 MD04G1123200.v1.1 MD04G1128000.v1.1 MD04G1128400.v1.1 MD05G1299700.v1.1 MD05G1300000.v1.1 MD07G1184000.v1.1 MD07G1292300.v1.1 MD08G1214800.v1.1
prunus_persica Prupe.1G205100_v2.0.a1 Prupe.1G205100_v2.0.a1 Prupe.1G205200_v2.0.a1 Prupe.2G222300_v2.0.a1 Prupe.2G223300_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223600_v2.0.a1 Prupe.2G223600_v2.0.a1 Prupe.2G223600_v2.0.a1 Prupe.2G223700_v2.0.a1 Prupe.2G223700_v2.0.a1 Prupe.2G223700_v2.0.a1 Prupe.2G223700_v2.0.a1 Prupe.2G223800_v2.0.a1 Prupe.2G223900_v2.0.a1 Prupe.2G224000_v2.0.a1 Prupe.5G162000_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G291000_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G210400_v2.0.a1 Prupe.7G210600_v2.0.a1 Prupe.7G210700_v2.0.a1 Prupe.7G210800_v2.0.a1 Prupe.7G210900_v2.0.a1 Prupe.8G097600_v2.0.a1 Prupe.8G097800_v2.0.a1 Prupe.8G097800_v2.0.a1
pyrus_communis pycom01g14430 pycom01g14440 pycom01g23130 pycom01g23160 pycom01g23330 pycom02g06210 pycom02g06220 pycom02g06250 pycom02g06270 pycom02g06710 pycom03g05360 pycom03g05380 pycom04g11470 pycom04g11480 pycom04g11520 pycom04g11560 pycom04g11600 pycom04g11610 pycom04g11650 pycom04g11660 pycom04g11670 pycom05g27790 pycom07g17630 pycom08g20960 pycom126g00020 pycom126g00030
rosa_chinensis RchiOBHm_Chr1g0318251 RchiOBHm_Chr1g0318731 RchiOBHm_Chr1g0339101 RchiOBHm_Chr1g0339111 RchiOBHm_Chr1g0347151 RchiOBHm_Chr1g0347161 RchiOBHm_Chr1g0347221 RchiOBHm_Chr1g0352401 RchiOBHm_Chr1g0352441 RchiOBHm_Chr1g0352461 RchiOBHm_Chr1g0356131 RchiOBHm_Chr1g0363991 RchiOBHm_Chr1g0364791 RchiOBHm_Chr1g0364801 RchiOBHm_Chr1g0364811 RchiOBHm_Chr1g0364851 RchiOBHm_Chr1g0364951 RchiOBHm_Chr1g0370821 RchiOBHm_Chr1g0381221 RchiOBHm_Chr1g0381231 RchiOBHm_Chr1g0381261 RchiOBHm_Chr1g0381271 RchiOBHm_Chr1g0381341 RchiOBHm_Chr1g0381351 RchiOBHm_Chr1g0381391 RchiOBHm_Chr1g0381801 RchiOBHm_Chr1g0381821 RchiOBHm_Chr2g0093241 RchiOBHm_Chr2g0116391 RchiOBHm_Chr3g0466441 RchiOBHm_Chr3g0466631 RchiOBHm_Chr3g0466651 RchiOBHm_Chr3g0496921 RchiOBHm_Chr4g0400441 RchiOBHm_Chr4g0400501 RchiOBHm_Chr4g0400511 RchiOBHm_Chr4g0400691 RchiOBHm_Chr4g0400701 RchiOBHm_Chr4g0404331 RchiOBHm_Chr5g0052101 RchiOBHm_Chr5g0052111 RchiOBHm_Chr5g0052171 RchiOBHm_Chr5g0052181 RchiOBHm_Chr6g0264161 RchiOBHm_Chr6g0265551 RchiOBHm_Chr7g0213571 RchiOBHm_Chr7g0213581
rosa_laevigata RLG00000002796 RLG00000003261 RLG00000007935 RLG00000007936 RLG00000009187 RLG00000014179 RLG00000016381 RLG00000018265 RLG00000024558 RLG00000024574 RLG00000026232 RLG00000026234 RLG00000026236 RLG00000026237 RLG00000027459 RLG00000027461 RLG00000027463 RLG00000027530 RLG00000028103 RLG00000028304 RLG00000028333 RLG00000029214 RLG00000029848 RLG00000029951 RLG00000030115 RLG00000030552 RLG00000033668 RLG00000034840 RLG00000034841 RLG00000034842 RLG00000035830
rosa_multiflora Rmu_sc0000654.1_g000004 Rmu_sc0000675.1_g000025 Rmu_sc0001075.1_g000002 Rmu_sc0001726.1_g000004 Rmu_sc0001772.1_g000061 Rmu_sc0001772.1_g000065 Rmu_sc0002067.1_g000002 Rmu_sc0002183.1_g000001 Rmu_sc0002183.1_g000006 Rmu_sc0002244.1_g000003 Rmu_sc0002313.1_g000004 Rmu_sc0002319.1_g000004 Rmu_sc0002539.1_g000085 Rmu_sc0002636.1_g000004 Rmu_sc0003229.1_g000007 Rmu_sc0003313.1_g000020 Rmu_sc0003546.1_g000007 Rmu_sc0003724.1_g000015 Rmu_sc0003936.1_g000029 Rmu_sc0004191.1_g000067 Rmu_sc0004525.1_g000012 Rmu_sc0005122.1_g000009 Rmu_sc0005255.1_g000040 Rmu_sc0005338.1_g000016 Rmu_sc0005584.1_g000008 Rmu_sc0006460.1_g000013 Rmu_sc0006872.1_g000011 Rmu_sc0006872.1_g000015 Rmu_sc0006872.1_g000016 Rmu_sc0006952.1_g000013 Rmu_sc0007342.1_g000005 Rmu_sc0007342.1_g000006 Rmu_sc0008418.1_g000003 Rmu_sc0008418.1_g000006 Rmu_sc0008636.1_g000007 Rmu_sc0008636.1_g000008 Rmu_sc0009205.1_g000014 Rmu_sc0009365.1_g000014 Rmu_sc0009917.1_g000002 Rmu_sc0019289.1_g000003 Rmu_ssc0000098.1_g000011 Rmu_ssc0000098.1_g000012 Rmu_ssc0000167.1_g000018 Rmu_ssc0000167.1_g000024 Rmu_ssc0000326.1_g000015
rosa_roxburghii Rroxscaffold_166G00440780 Rroxscaffold_176G00431500 Rroxscaffold_1G00015080 Rroxscaffold_1G00027880 Rroxscaffold_1G00027890 Rroxscaffold_1G00027920 Rroxscaffold_2G00127250 Rroxscaffold_2G00148380 Rroxscaffold_3G00219450 Rroxscaffold_3G00232170 Rroxscaffold_3G00232210 Rroxscaffold_3G00242230 Rroxscaffold_3G00242240 Rroxscaffold_3G00244790 Rroxscaffold_3G00245790 Rroxscaffold_4G00278400 Rroxscaffold_4G00278430 Rroxscaffold_4G00278670 Rroxscaffold_4G00278680 Rroxscaffold_4G00278690 Rroxscaffold_4G00278700 Rroxscaffold_4G00278720 Rroxscaffold_4G00291690 Rroxscaffold_4G00292070 Rroxscaffold_4G00292090 Rroxscaffold_4G00292770 Rroxscaffold_4G00302240 Rroxscaffold_4G00302860 Rroxscaffold_4G00311320 Rroxscaffold_4G00311330 Rroxscaffold_4G00320570 Rroxscaffold_4G00322050 Rroxscaffold_4G00329480 Rroxscaffold_4G00329730 Rroxscaffold_5G00345500 Rroxscaffold_5G00345510 Rroxscaffold_5G00360830 Rroxscaffold_5G00360840 Rroxscaffold_6G00393450 Rroxscaffold_6G00404030 Rroxscaffold_6G00414220 Rroxscaffold_6G00414230 Rroxscaffold_6G00414280 Rroxscaffold_6G00414290 Rroxscaffold_6G00414350 Rroxscaffold_6G00414470 Rroxscaffold_7G00202570 Rroxscaffold_7G00203460 Rroxscaffold_7G00203470
rosa_rugosa Rorug01G0020500 Rorug01G0020600 Rorug01G0020700 Rorug01G0143700.1 Rorug01G0225700 Rorug01G0228500 Rorug01G0228600 Rorug01G0228600 Rorug01G0228700 Rorug01G0228800 Rorug01G0228800 Rorug01G0229000 Rorug01G0229300 Rorug01G0229400 Rorug01G0229600 Rorug01G0229700 Rorug01G0232200 Rorug01G0232600 Rorug01G0232600 Rorug01G0311900 Rorug01G0311900 Rorug01G0318400 Rorug01G0318500 Rorug01G0318500 Rorug01G0318500 Rorug01G0427900 Rorug01G0427900 Rorug01G0428000 Rorug01G0428200 Rorug01G0428300 Rorug01G0428400 Rorug01G0431500 Rorug01G0431600 Rorug01G0431600 Rorug02G0033800 Rorug02G0206300 Rorug03G0081900 Rorug03G0083200 Rorug03G0083200 Rorug03G0083300 Rorug04G0025100 Rorug04G0025100 Rorug04G0025200 Rorug04G0025300 Rorug04G0058600 Rorug04G0058700 Rorug04G0058800 Rorug04G0098400 Rorug04G0098500 Rorug05G0274500 Rorug05G0274600 Rorug05G0274800 Rorug06G0008500 Rorug06G0009100 Rorug06G0018000
rosa_samantha Rh1AG031700 Rh1AG036100 Rh1AG089800 Rh1AG239800 Rh1AG239900 Rh1AG242000 Rh1AG242300 Rh1AG245600 Rh1AG262600 Rh1AG319700 Rh1AG319800 Rh1AG319900 Rh1AG327200 Rh1AG451100 Rh1AG451200 Rh1AG451300 Rh1AG451600 Rh1AG451700 Rh1BG027200 Rh1BG071600 Rh1BG090700 Rh1BG211000 Rh1BG213000 Rh1BG213500 Rh1BG282800 Rh1BG288400 Rh1BG408100 Rh1BG408200 Rh1BG408400 Rh1BG408700 Rh1CG026300 Rh1CG028300 Rh1CG224100 Rh1CG226000 Rh1CG226100 Rh1CG229300 Rh1CG229400 Rh1CG245900 Rh1CG299200 Rh1CG299400 Rh1CG299500 Rh1CG303300 Rh1CG305100 Rh1CG422500 Rh1CG422600 Rh1CG422700 Rh1CG422800 Rh1CG422900 Rh1CG423100 Rh1CG423300 Rh1CG423400 Rh1CG426300 Rh1CG426600 Rh1DG239300 Rh1DG239600 Rh1DG258300 Rh1DG314200 Rh1DG314300 Rh1DG314400 Rh1DG320000 Rh1DG439200 Rh1DG439400 Rh1DG439500 Rh1DG439700 Rh1DG440000 Rh1DG443800 Rh2AG261800 Rh2BG080900 Rh2CG083300 Rh2DG078900 Rh2DG270000 Rh2DG270100 Rh3AG128400 Rh3AG130100 Rh3AG130500 Rh3AG332500 Rh3AG332600 Rh3AG332800 Rh3BG149700 Rh3BG151500 Rh3CG151400 Rh3CG354500 Rh3CG366800 Rh3DG150500 Rh3DG152200 Rh4AG101400 Rh4AG102900 Rh4AG148300 Rh4AG148600 Rh4BG098000 Rh4CG111100 Rh4CG111300 Rh4CG155100 Rh4DG094800 Rh5AG213600 Rh5AG346900 Rh5AG347000 Rh5BG357500 Rh5BG357700 Rh5BG485400 Rh5CG383100 Rh5CG383200 Rh5CG383300 Rh5CG509900 Rh5DG373000 Rh5DG373200 Rh6BG054300 Rh6BG126300 Rh6CG125100 Rh6CG185300 Rh6DG177000 Rh7AG276100 Rh7AG276200 Rh7BG230500 Rh7BG270500 Rh7BG364000 Rh7CG250100 Rh7CG295200 Rh7CG295300 Rh7DG389700
rosa_wichuraiana Rw0G001190 Rw0G010680 Rw0G013360 Rw0G014310 Rw0G014890 Rw0G020310 Rw0G021350 Rw0G022510 Rw1G003360 Rw1G004330 Rw1G006930 Rw1G008310 Rw1G021090 Rw1G021150 Rw1G021210 Rw1G023200 Rw1G023210 Rw1G028340 Rw1G028350 Rw1G028990 Rw1G032510 Rw1G039370 Rw1G039400 Rw1G039410 Rw1G039420 Rw1G039430 Rw2G006700 Rw2G020550 Rw2G020580 Rw3G012130 Rw3G012300 Rw3G012310 Rw3G028220 Rw3G029230 Rw5G021600 Rw5G032790 Rw6G011240 Rw7G027670 Rw7G032780

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1035
AccI GTMKAC 1 cut(s) 15
AccII CGCG 1 cut(s) 1387
AciI CCGC 1 cut(s) 348
AclI AACGTT 1 cut(s) 1584
AclWI GGATC 5 cut(s) 203, 536, 549, 599, 616
AcsI RAATTY 9 cut(s) 40, 760, 869, 892, 949, 1003, 1432, 1840, 1916
AcuI CTGAAG 1 cut(s) 1172
AcyI GRCGYC 1 cut(s) 622
AfaI GTAC 5 cut(s) 123, 158, 507, 732, 1370
AfiI CCNNNNNNNGG 2 cut(s) 1731, 1732
AjnI CCWGG 2 cut(s) 472, 1868
AjuI GAANNNNNNNTTGG 2 cut(s) 650, 682
AleI CACNNNNGTG 1 cut(s) 616
Alw21I GWGCWC 3 cut(s) 1241, 1827, 1932
AlwI GGATC 5 cut(s) 203, 536, 549, 599, 616
Ama87I CYCGRG 1 cut(s) 1526
AoxI GGCC 1 cut(s) 113
ApeKI GCWGC 4 cut(s) 277, 641, 1865, 1875
ApoI RAATTY 9 cut(s) 40, 760, 869, 892, 949, 1003, 1432, 1840, 1916
ArsI GACNNNNNNTTYG 4 cut(s) 607, 639, 1365, 1397
AseI ATTAAT 1 cut(s) 26
Asp700I GAANNNNTTC 1 cut(s) 170
AspLEI GCGC 3 cut(s) 997, 1389, 1875
AspS9I GGNCC 1 cut(s) 113
AsuHPI GGTGA 2 cut(s) 1300, 1649
AsuII TTCGAA 1 cut(s) 1000
AsuNHI GCTAGC 1 cut(s) 1757
AvaI CYCGRG 1 cut(s) 1526
AxyI CCTNAGG 1 cut(s) 1815
BaeGI GKGCMC 1 cut(s) 573
BamHI GGATCC 1 cut(s) 541
BanII GRGCYC 2 cut(s) 1241, 1827
BauI CACGAG 1 cut(s) 141
BbsI GAAGAC 5 cut(s) 193, 249, 761, 1229, 1500
Bbv12I GWGCWC 3 cut(s) 1241, 1827, 1932
BbvI GCAGC 4 cut(s) 264, 653, 1877, 1887
BccI CCATC 4 cut(s) 41, 645, 1060, 1709
BceAI ACGGC 2 cut(s) 834, 1863
BcgI CGANNNNNNTGC 3 cut(s) 29, 1727, 1761
BciT130I CCWGG 2 cut(s) 474, 1870
BclI TGATCA 1 cut(s) 406
BfaI CTAG 5 cut(s) 500, 1710, 1758, 1803, 1893
BfmI CTRYAG 1 cut(s) 639
BfoI RGCGCY 1 cut(s) 998
BfuAI ACCTGC 1 cut(s) 1035
BisI GCNGC 4 cut(s) 278, 642, 1866, 1876
BlsI GCNGC 4 cut(s) 279, 643, 1867, 1877
Bme1390I CCNGG 2 cut(s) 474, 1870
BmeT110I CYCGRG 1 cut(s) 1526
BmgT120I GGNCC 1 cut(s) 113
BmiI GGNNCC 2 cut(s) 543, 709
BmrFI CCNGG 2 cut(s) 474, 1870
BmrI ACTGGG 1 cut(s) 547
BmsI GCATC 2 cut(s) 1477, 1563
BmtI GCTAGC 1 cut(s) 1761
BmuI ACTGGG 1 cut(s) 547
BpiI GAAGAC 5 cut(s) 193, 249, 761, 1229, 1500
Bpu14I TTCGAA 1 cut(s) 1000
BpuEI CTTGAG 3 cut(s) 1265, 1448, 1811
Bsa29I ATCGAT 1 cut(s) 802
BsaAI YACGTR 1 cut(s) 583
BsaHI GRCGYC 1 cut(s) 622
BsaJI CCNNGG 1 cut(s) 425
Bsc4I CCNNNNNNNGG 2 cut(s) 1731, 1732
Bse1I ACTGG 4 cut(s) 102, 272, 542, 1478
Bse21I CCTNAGG 1 cut(s) 1815
Bse3DI GCAATG 1 cut(s) 1838
BseBI CCWGG 2 cut(s) 474, 1870
BseCI ATCGAT 1 cut(s) 802
BseDI CCNNGG 1 cut(s) 425
BseGI GGATG 1 cut(s) 1536
BseLI CCNNNNNNNGG 2 cut(s) 1731, 1732
BseMI GCAATG 1 cut(s) 1838
BseMII CTCAG 1 cut(s) 1829
BseNI ACTGG 4 cut(s) 102, 272, 542, 1478
BseRI GAGGAG 1 cut(s) 80
BseSI GKGCMC 1 cut(s) 573
BseXI GCAGC 4 cut(s) 264, 653, 1877, 1887
BseYI CCCAGC 1 cut(s) 1908
BsgI GTGCAG 3 cut(s) 126, 1358, 1611
Bsh1236I CGCG 1 cut(s) 1387
BshFI GGCC 1 cut(s) 115
BshVI ATCGAT 1 cut(s) 802
BsiHKAI GWGCWC 3 cut(s) 1241, 1827, 1932
BsiHKCI CYCGRG 1 cut(s) 1526
BslFI GGGAC 3 cut(s) 544, 1708, 1925
BslI CCNNNNNNNGG 2 cut(s) 1731, 1732
BsmFI GGGAC 3 cut(s) 544, 1708, 1925
BsmI GAATGC 1 cut(s) 1670
BsnI GGCC 1 cut(s) 115
BsoBI CYCGRG 1 cut(s) 1526
Bsp119I TTCGAA 1 cut(s) 1000
Bsp1286I GDGCHC 4 cut(s) 573, 1241, 1827, 1932
Bsp1407I TGTACA 2 cut(s) 156, 730
Bsp143I GATC 8 cut(s) 208, 406, 541, 591, 608, 1053, 1133, 1207
BspACI CCGC 1 cut(s) 348
BspANI GGCC 1 cut(s) 115
BspCNI CTCAG 1 cut(s) 1828
BspDI ATCGAT 1 cut(s) 802
BspFNI CGCG 1 cut(s) 1387
BspLI GGNNCC 2 cut(s) 543, 709
BspMAI CTGCAG 1 cut(s) 643
BspMI ACCTGC 1 cut(s) 1035
BspOI GCTAGC 1 cut(s) 1761
BspPI GGATC 5 cut(s) 203, 536, 549, 599, 616
BspQI GCTCTTC 2 cut(s) 936, 1647
BspT104I TTCGAA 1 cut(s) 1000
BsrDI GCAATG 1 cut(s) 1838
BsrGI TGTACA 2 cut(s) 156, 730
BsrI ACTGG 4 cut(s) 102, 272, 542, 1478
BssECI CCNNGG 1 cut(s) 425
BssMI GATC 8 cut(s) 208, 406, 541, 591, 608, 1053, 1133, 1207
BssNI GRCGYC 1 cut(s) 622
BssSI CACGAG 1 cut(s) 141
BssT1I CCWWGG 1 cut(s) 425
Bst2BI CACGAG 1 cut(s) 141
Bst2UI CCWGG 2 cut(s) 474, 1870
Bst4CI ACNGT 7 cut(s) 418, 1228, 1288, 1368, 1573, 1717, 1924
Bst6I CTCTTC 3 cut(s) 936, 1544, 1647
BstACI GRCGYC 1 cut(s) 622
BstAPI GCANNNNNTGC 1 cut(s) 485
BstAUI TGTACA 2 cut(s) 156, 730
BstBAI YACGTR 1 cut(s) 583
BstBI TTCGAA 1 cut(s) 1000
BstC8I GCNNGC 5 cut(s) 117, 388, 857, 1040, 1759
BstDEI CTNAG 4 cut(s) 147, 1242, 1751, 1815
BstF5I GGATG 1 cut(s) 1536
BstFNI CGCG 1 cut(s) 1387
BstH2I RGCGCY 1 cut(s) 998
BstHHI GCGC 3 cut(s) 997, 1389, 1875
BstKTI GATC 8 cut(s) 211, 409, 544, 594, 611, 1056, 1136, 1210
BstMBI GATC 8 cut(s) 208, 406, 541, 591, 608, 1053, 1133, 1207
BstMWI GCNNNNNNNGC 4 cut(s) 485, 1386, 1474, 1754
BstNI CCWGG 2 cut(s) 474, 1870
BstNSI RCATGY 2 cut(s) 390, 1042
BstSCI CCNGG 2 cut(s) 472, 1868
BstSFI CTRYAG 1 cut(s) 639
BstSLI GKGCMC 1 cut(s) 573
BstUI CGCG 1 cut(s) 1387
BstV1I GCAGC 4 cut(s) 264, 653, 1877, 1887
BstV2I GAAGAC 5 cut(s) 193, 249, 761, 1229, 1500
BstX2I RGATCY 2 cut(s) 541, 591
BstYI RGATCY 2 cut(s) 541, 591
Bsu15I ATCGAT 1 cut(s) 802
Bsu36I CCTNAGG 1 cut(s) 1815
BsuRI GGCC 1 cut(s) 115
BsuTUI ATCGAT 1 cut(s) 802
BtgZI GCGATG 1 cut(s) 1540
BtsCI GGATG 1 cut(s) 1536
BtsIMutI CAGTG 3 cut(s) 109, 1233, 1930
BveI ACCTGC 1 cut(s) 1035
Cac8I GCNNGC 5 cut(s) 117, 388, 857, 1040, 1759
CfoI GCGC 3 cut(s) 997, 1389, 1875
Cfr13I GGNCC 1 cut(s) 113
ClaI ATCGAT 1 cut(s) 802
CseI GACGC 2 cut(s) 611, 1369
CsiI ACCWGGT 1 cut(s) 472
Csp6I GTAC 5 cut(s) 122, 157, 506, 731, 1369
CviAII CATG 4 cut(s) 387, 1039, 1087, 1560
CviQI GTAC 5 cut(s) 122, 157, 506, 731, 1369
DdeI CTNAG 4 cut(s) 147, 1242, 1751, 1815
DpnI GATC 8 cut(s) 210, 408, 543, 593, 610, 1055, 1135, 1209
DpnII GATC 8 cut(s) 208, 406, 541, 591, 608, 1053, 1133, 1207
Eam1104I CTCTTC 3 cut(s) 936, 1544, 1647
EarI CTCTTC 3 cut(s) 936, 1544, 1647
Ecl136II GAGCTC 2 cut(s) 1239, 1825
Eco130I CCWWGG 1 cut(s) 425
Eco24I GRGCYC 2 cut(s) 1241, 1827
Eco32I GATATC 1 cut(s) 1074
Eco53kI GAGCTC 2 cut(s) 1239, 1825
Eco57I CTGAAG 1 cut(s) 1172
Eco81I CCTNAGG 1 cut(s) 1815
Eco88I CYCGRG 1 cut(s) 1526
EcoICRI GAGCTC 2 cut(s) 1239, 1825
EcoRI GAATTC 1 cut(s) 1840
EcoRII CCWGG 2 cut(s) 472, 1868
EcoRV GATATC 1 cut(s) 1074
EcoT14I CCWWGG 1 cut(s) 425
EcoT38I GRGCYC 2 cut(s) 1241, 1827
ErhI CCWWGG 1 cut(s) 425
FaeI CATG 4 cut(s) 390, 1042, 1090, 1563
FaqI GGGAC 3 cut(s) 544, 1708, 1925
FatI CATG 4 cut(s) 386, 1038, 1086, 1559
FauNDI CATATG 1 cut(s) 286
FbaI TGATCA 1 cut(s) 406
FblI GTMKAC 1 cut(s) 15
Fnu4HI GCNGC 4 cut(s) 278, 642, 1866, 1876
FokI GGATG 1 cut(s) 1543
FriOI GRGCYC 2 cut(s) 1241, 1827
Fsp4HI GCNGC 4 cut(s) 278, 642, 1866, 1876
FspBI CTAG 5 cut(s) 500, 1710, 1758, 1803, 1893
GlaI GCGC 3 cut(s) 996, 1388, 1874
GluI GCNGC 4 cut(s) 278, 642, 1866, 1876
GsaI CCCAGC 1 cut(s) 1912
HaeII RGCGCY 1 cut(s) 998
HaeIII GGCC 1 cut(s) 115
HgaI GACGC 2 cut(s) 611, 1369
HhaI GCGC 3 cut(s) 997, 1389, 1875
Hin1I GRCGYC 1 cut(s) 622
Hin1II CATG 4 cut(s) 390, 1042, 1090, 1563
Hin6I GCGC 3 cut(s) 995, 1387, 1873
HinP1I GCGC 3 cut(s) 995, 1387, 1873
HincII GTYRAC 2 cut(s) 16, 328
HindII GTYRAC 2 cut(s) 16, 328
HinfI GANTC 5 cut(s) 51, 68, 799, 1121, 1291
HphI GGTGA 2 cut(s) 1300, 1649
Hpy166II GTNNAC 3 cut(s) 16, 296, 328
Hpy188I TCNGA 2 cut(s) 73, 1693
Hpy188III TCNNGA 8 cut(s) 399, 500, 529, 966, 1282, 1295, 1511, 1528
Hpy8I GTNNAC 3 cut(s) 16, 296, 328
Hpy99I CGWCG 1 cut(s) 209
HpyAV CCTTC 3 cut(s) 104, 1147, 1400
HpyCH4III ACNGT 7 cut(s) 418, 1228, 1288, 1368, 1573, 1717, 1924
HpyCH4IV ACGT 4 cut(s) 21, 364, 582, 1584
HpyCH4V TGCA 9 cut(s) 107, 197, 479, 641, 865, 1042, 1252, 1339, 1592
HpyF10VI GCNNNNNNNGC 4 cut(s) 485, 1386, 1474, 1754
HpyF3I CTNAG 4 cut(s) 147, 1242, 1751, 1815
HpySE526I ACGT 4 cut(s) 21, 364, 582, 1584
Hsp92I GRCGYC 1 cut(s) 622
Hsp92II CATG 4 cut(s) 390, 1042, 1090, 1563
HspAI GCGC 3 cut(s) 995, 1387, 1873
Ksp22I TGATCA 1 cut(s) 406
Kzo9I GATC 8 cut(s) 208, 406, 541, 591, 608, 1053, 1133, 1207
LguI GCTCTTC 2 cut(s) 936, 1647
LmnI GCTCC 3 cut(s) 350, 707, 1807
Lsp1109I GCAGC 4 cut(s) 264, 653, 1877, 1887
LweI GCATC 2 cut(s) 1477, 1563
MabI ACCWGGT 1 cut(s) 472
MaeI CTAG 5 cut(s) 500, 1710, 1758, 1803, 1893
MaeII ACGT 4 cut(s) 21, 364, 582, 1584
MaeIII GTNAC 4 cut(s) 943, 975, 1228, 1381
MalI GATC 8 cut(s) 210, 408, 543, 593, 610, 1055, 1135, 1209
MboI GATC 8 cut(s) 208, 406, 541, 591, 608, 1053, 1133, 1207
MfeI CAATTG 1 cut(s) 786
MflI RGATCY 2 cut(s) 541, 591
MhlI GDGCHC 4 cut(s) 573, 1241, 1827, 1932
MlyI GAGTC 2 cut(s) 60, 77
MmeI TCCRAC 2 cut(s) 648, 731
MnlI CCTC 8 cut(s) 58, 80, 496, 770, 1507, 1628, 1693, 1824
MroXI GAANNNNTTC 1 cut(s) 170
MseI TTAA 7 cut(s) 26, 357, 834, 1007, 1110, 1146, 1628
MslI CAYNNNNRTG 6 cut(s) 182, 566, 616, 939, 1675, 1902
MspR9I CCNGG 2 cut(s) 474, 1870
MunI CAATTG 1 cut(s) 786
Mva1269I GAATGC 1 cut(s) 1670
MvaI CCWGG 2 cut(s) 474, 1870
MvnI CGCG 1 cut(s) 1387
MwoI GCNNNNNNNGC 4 cut(s) 485, 1386, 1474, 1754
NdeI CATATG 1 cut(s) 286
NdeII GATC 8 cut(s) 208, 406, 541, 591, 608, 1053, 1133, 1207
NheI GCTAGC 1 cut(s) 1757
NlaIII CATG 4 cut(s) 390, 1042, 1090, 1563
NlaIV GGNNCC 2 cut(s) 543, 709
NmuCI GTSAC 4 cut(s) 943, 975, 1228, 1381
NspI RCATGY 2 cut(s) 390, 1042
NspV TTCGAA 1 cut(s) 1000
OliI CACNNNNGTG 1 cut(s) 616
PaeI GCATGC 2 cut(s) 390, 1042
PciSI GCTCTTC 2 cut(s) 936, 1647
PcsI WCGNNNNNNNCGW 1 cut(s) 824
PctI GAATGC 1 cut(s) 1670
PdmI GAANNNNTTC 1 cut(s) 170
PfeI GAWTC 3 cut(s) 799, 1121, 1291
PkrI GCNGC 4 cut(s) 279, 643, 1867, 1877
PleI GAGTC 2 cut(s) 59, 76
PpsI GAGTC 2 cut(s) 59, 76
Ppu21I YACGTR 1 cut(s) 583
PshBI ATTAAT 1 cut(s) 26
Psp124BI GAGCTC 2 cut(s) 1241, 1827
Psp1406I AACGTT 1 cut(s) 1584
Psp6I CCWGG 2 cut(s) 472, 1868
PspFI CCCAGC 1 cut(s) 1908
PspGI CCWGG 2 cut(s) 472, 1868
PspN4I GGNNCC 2 cut(s) 543, 709
PspPI GGNCC 1 cut(s) 113
PstI CTGCAG 1 cut(s) 643
PsuI RGATCY 2 cut(s) 541, 591
RsaI GTAC 5 cut(s) 123, 158, 507, 732, 1370
RsaNI GTAC 5 cut(s) 122, 157, 506, 731, 1369
RseI CAYNNNNRTG 6 cut(s) 182, 566, 616, 939, 1675, 1902
SacI GAGCTC 2 cut(s) 1241, 1827
SalI GTCGAC 1 cut(s) 14
SapI GCTCTTC 2 cut(s) 936, 1647
SaqAI TTAA 7 cut(s) 26, 357, 834, 1007, 1110, 1146, 1628
SatI GCNGC 4 cut(s) 278, 642, 1866, 1876
Sau3AI GATC 8 cut(s) 208, 406, 541, 591, 608, 1053, 1133, 1207
Sau96I GGNCC 1 cut(s) 113
SchI GAGTC 2 cut(s) 60, 77
ScrFI CCNGG 2 cut(s) 474, 1870
SduI GDGCHC 4 cut(s) 573, 1241, 1827, 1932
SexAI ACCWGGT 1 cut(s) 472
SfaNI GCATC 2 cut(s) 1477, 1563
SfcI CTRYAG 1 cut(s) 639
SfuI TTCGAA 1 cut(s) 1000
SmiMI CAYNNNNRTG 6 cut(s) 182, 566, 616, 939, 1675, 1902
SmlI CTYRAG 3 cut(s) 1280, 1427, 1826
SmoI CTYRAG 3 cut(s) 1280, 1427, 1826
SphI GCATGC 2 cut(s) 390, 1042
SsiI CCGC 1 cut(s) 348
SspI AATATT 1 cut(s) 794
SspMI CTAG 5 cut(s) 500, 1710, 1758, 1803, 1893
SstI GAGCTC 2 cut(s) 1241, 1827
StyD4I CCNGG 2 cut(s) 472, 1868
StyI CCWWGG 1 cut(s) 425
TaaI ACNGT 7 cut(s) 418, 1228, 1288, 1368, 1573, 1717, 1924
TaiI ACGT 4 cut(s) 24, 367, 585, 1587
TaqI TCGA 7 cut(s) 15, 207, 775, 802, 1000, 1064, 1737
TatI WGTACW 4 cut(s) 121, 156, 730, 1368
TfiI GAWTC 3 cut(s) 799, 1121, 1291
Tru1I TTAA 7 cut(s) 26, 357, 834, 1007, 1110, 1146, 1628
Tru9I TTAA 7 cut(s) 26, 357, 834, 1007, 1110, 1146, 1628
TscAI CASTG 2 cut(s) 109, 1233
TseFI GTSAC 4 cut(s) 943, 975, 1228, 1381
TseI GCWGC 4 cut(s) 277, 641, 1865, 1875
Tsp45I GTSAC 4 cut(s) 943, 975, 1228, 1381
TspDTI ATGAA 9 cut(s) 166, 180, 550, 644, 903, 923, 942, 1187, 1531
TspGWI ACGGA 1 cut(s) 604
TspRI CASTG 2 cut(s) 109, 1233
VspI ATTAAT 1 cut(s) 26
XapI RAATTY 9 cut(s) 40, 760, 869, 892, 949, 1003, 1432, 1840, 1916
XbaI TCTAGA 1 cut(s) 499
XceI RCATGY 2 cut(s) 390, 1042
XmiI GTMKAC 1 cut(s) 15
XmnI GAANNNNTTC 1 cut(s) 170
XspI CTAG 5 cut(s) 500, 1710, 1758, 1803, 1893
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.