Cyclic nucleotide-gated ion channel 1-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 79 |
| Acc36I | ACCTGC | 1 cut(s) | 987 |
| AciI | CCGC | 1 cut(s) | 1175 |
| AclWI | GGATC | 5 cut(s) | 126, 170, 183, 1104, 1483 |
| AcsI | RAATTY | 3 cut(s) | 734, 890, 1255 |
| AcuI | CTGAAG | 1 cut(s) | 1473 |
| AfaI | GTAC | 9 cut(s) | 29, 66, 191, 513, 632, 742, 1075, 1449, 1495 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 985 |
| AgsI | TTSAA | 8 cut(s) | 445, 597, 842, 942, 1193, 1342, 1625, 1687 |
| AjnI | CCWGG | 2 cut(s) | 58, 171 |
| AleI | CACNNNNGTG | 1 cut(s) | 60 |
| AluBI | AGCT | 8 cut(s) | 254, 352, 1171, 1250, 1262, 1297, 1540, 1712 |
| AluI | AGCT | 8 cut(s) | 254, 352, 1171, 1250, 1262, 1297, 1540, 1712 |
| Alw26I | GTCTC | 1 cut(s) | 552 |
| AlwI | GGATC | 5 cut(s) | 126, 170, 183, 1104, 1483 |
| ApeKI | GCWGC | 3 cut(s) | 35, 38, 251 |
| ApoI | RAATTY | 3 cut(s) | 734, 890, 1255 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 563, 595, 1611, 1643 |
| AseI | ATTAAT | 1 cut(s) | 531 |
| AspLEI | GCGC | 1 cut(s) | 80 |
| AsuHPI | GGTGA | 2 cut(s) | 278, 1444 |
| AsuII | TTCGAA | 1 cut(s) | 754 |
| AsuNHI | GCTAGC | 1 cut(s) | 358 |
| AxyI | CCTNAGG | 1 cut(s) | 1240 |
| BaeGI | GKGCMC | 1 cut(s) | 797 |
| BamHI | GGATCC | 1 cut(s) | 175 |
| BanII | GRGCYC | 1 cut(s) | 434 |
| BauI | CACGAG | 1 cut(s) | 492 |
| BbsI | GAAGAC | 1 cut(s) | 452 |
| BbvCI | CCTCAGC | 1 cut(s) | 353 |
| BbvI | GCAGC | 3 cut(s) | 22, 25, 263 |
| BccI | CCATC | 7 cut(s) | 128, 311, 512, 686, 1147, 1304, 1514 |
| BciT130I | CCWGG | 2 cut(s) | 60, 173 |
| BcoDI | GTCTC | 1 cut(s) | 552 |
| BfaI | CTAG | 2 cut(s) | 359, 1566 |
| BfmI | CTRYAG | 3 cut(s) | 39, 550, 1375 |
| BfuAI | ACCTGC | 1 cut(s) | 987 |
| BisI | GCNGC | 3 cut(s) | 36, 39, 252 |
| BlsI | GCNGC | 3 cut(s) | 37, 40, 253 |
| BmcAI | AGTACT | 1 cut(s) | 742 |
| Bme1390I | CCNGG | 2 cut(s) | 60, 173 |
| BmiI | GGNNCC | 3 cut(s) | 177, 433, 1410 |
| BmrFI | CCNGG | 2 cut(s) | 60, 173 |
| BmsI | GCATC | 3 cut(s) | 835, 1376, 1413 |
| BmtI | GCTAGC | 1 cut(s) | 362 |
| BpiI | GAAGAC | 1 cut(s) | 452 |
| Bpu10I | CCTNAGC | 1 cut(s) | 353 |
| Bpu14I | TTCGAA | 1 cut(s) | 754 |
| BpuEI | CTTGAG | 2 cut(s) | 1283, 1526 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1143 |
| BsaJI | CCNNGG | 1 cut(s) | 58 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 985 |
| Bse1I | ACTGG | 3 cut(s) | 120, 126, 957 |
| Bse21I | CCTNAGG | 1 cut(s) | 1240 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1143 |
| BseBI | CCWGG | 2 cut(s) | 60, 173 |
| BseDI | CCNNGG | 1 cut(s) | 58 |
| BseGI | GGATG | 5 cut(s) | 322, 678, 734, 1391, 1565 |
| BseJI | GATNNNNATC | 1 cut(s) | 1143 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 985 |
| BseMII | CTCAG | 1 cut(s) | 344 |
| BseNI | ACTGG | 3 cut(s) | 120, 126, 957 |
| BseRI | GAGGAG | 2 cut(s) | 186, 1628 |
| BseSI | GKGCMC | 1 cut(s) | 797 |
| BseXI | GCAGC | 3 cut(s) | 22, 25, 263 |
| BsgI | GTGCAG | 1 cut(s) | 1061 |
| BslFI | GGGAC | 4 cut(s) | 316, 1026, 1594, 1649 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 985 |
| BsmAI | GTCTC | 1 cut(s) | 552 |
| BsmFI | GGGAC | 4 cut(s) | 316, 1026, 1594, 1649 |
| Bsp119I | TTCGAA | 1 cut(s) | 754 |
| Bsp1286I | GDGCHC | 2 cut(s) | 434, 797 |
| Bsp143I | GATC | 9 cut(s) | 118, 175, 266, 869, 1109, 1269, 1371, 1475, 1587 |
| BspACI | CCGC | 1 cut(s) | 1175 |
| BspCNI | CTCAG | 1 cut(s) | 345 |
| BspHI | TCATGA | 2 cut(s) | 130, 1147 |
| BspLI | GGNNCC | 3 cut(s) | 177, 433, 1410 |
| BspMAI | CTGCAG | 1 cut(s) | 43 |
| BspMI | ACCTGC | 1 cut(s) | 987 |
| BspOI | GCTAGC | 1 cut(s) | 362 |
| BspPI | GGATC | 5 cut(s) | 126, 170, 183, 1104, 1483 |
| BspQI | GCTCTTC | 1 cut(s) | 1433 |
| BspT104I | TTCGAA | 1 cut(s) | 754 |
| BsrI | ACTGG | 3 cut(s) | 120, 126, 957 |
| BssECI | CCNNGG | 1 cut(s) | 58 |
| BssMI | GATC | 9 cut(s) | 118, 175, 266, 869, 1109, 1269, 1371, 1475, 1587 |
| BssSI | CACGAG | 1 cut(s) | 492 |
| Bst2BI | CACGAG | 1 cut(s) | 492 |
| Bst2UI | CCWGG | 2 cut(s) | 60, 173 |
| Bst4CI | ACNGT | 7 cut(s) | 32, 324, 373, 696, 1205, 1379, 1603 |
| Bst6I | CTCTTC | 2 cut(s) | 1289, 1433 |
| BstBI | TTCGAA | 1 cut(s) | 754 |
| BstC8I | GCNNGC | 3 cut(s) | 360, 643, 1173 |
| BstDEI | CTNAG | 3 cut(s) | 341, 353, 1240 |
| BstF5I | GGATG | 5 cut(s) | 322, 678, 734, 1391, 1565 |
| BstHHI | GCGC | 1 cut(s) | 80 |
| BstKTI | GATC | 9 cut(s) | 121, 178, 269, 872, 1112, 1272, 1374, 1478, 1590 |
| BstMAI | GTCTC | 1 cut(s) | 552 |
| BstMBI | GATC | 9 cut(s) | 118, 175, 266, 869, 1109, 1269, 1371, 1475, 1587 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 959, 1363, 1640 |
| BstNI | CCWGG | 2 cut(s) | 60, 173 |
| BstNSI | RCATGY | 3 cut(s) | 710, 865, 1040 |
| BstSCI | CCNGG | 2 cut(s) | 58, 171 |
| BstSFI | CTRYAG | 3 cut(s) | 39, 550, 1375 |
| BstSLI | GKGCMC | 1 cut(s) | 797 |
| BstV1I | GCAGC | 3 cut(s) | 22, 25, 263 |
| BstV2I | GAAGAC | 1 cut(s) | 452 |
| BstX2I | RGATCY | 1 cut(s) | 175 |
| BstYI | RGATCY | 1 cut(s) | 175 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1240 |
| BtsCI | GGATG | 5 cut(s) | 322, 678, 734, 1391, 1565 |
| BtsI | GCAGTG | 2 cut(s) | 905, 1450 |
| BtsIMutI | CAGTG | 5 cut(s) | 37, 701, 905, 964, 1450 |
| BveI | ACCTGC | 1 cut(s) | 987 |
| Cac8I | GCNNGC | 3 cut(s) | 360, 643, 1173 |
| CciI | TCATGA | 2 cut(s) | 130, 1147 |
| CfoI | GCGC | 1 cut(s) | 80 |
| Csp6I | GTAC | 9 cut(s) | 28, 65, 190, 512, 631, 741, 1074, 1448, 1494 |
| CviQI | GTAC | 9 cut(s) | 28, 65, 190, 512, 631, 741, 1074, 1448, 1494 |
| DdeI | CTNAG | 3 cut(s) | 341, 353, 1240 |
| DpnI | GATC | 9 cut(s) | 120, 177, 268, 871, 1111, 1271, 1373, 1477, 1589 |
| DpnII | GATC | 9 cut(s) | 118, 175, 266, 869, 1109, 1269, 1371, 1475, 1587 |
| DraI | TTTAAA | 1 cut(s) | 783 |
| Eam1104I | CTCTTC | 2 cut(s) | 1289, 1433 |
| EarI | CTCTTC | 2 cut(s) | 1289, 1433 |
| Eco24I | GRGCYC | 1 cut(s) | 434 |
| Eco57I | CTGAAG | 1 cut(s) | 1473 |
| Eco81I | CCTNAGG | 1 cut(s) | 1240 |
| EcoRII | CCWGG | 2 cut(s) | 58, 171 |
| EcoT38I | GRGCYC | 1 cut(s) | 434 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1173, 1205 |
| FaqI | GGGAC | 4 cut(s) | 316, 1026, 1594, 1649 |
| Fnu4HI | GCNGC | 3 cut(s) | 36, 39, 252 |
| FokI | GGATG | 5 cut(s) | 329, 665, 741, 1398, 1572 |
| FriOI | GRGCYC | 1 cut(s) | 434 |
| Fsp4HI | GCNGC | 3 cut(s) | 36, 39, 252 |
| FspBI | CTAG | 2 cut(s) | 359, 1566 |
| FspI | TGCGCA | 1 cut(s) | 79 |
| GlaI | GCGC | 1 cut(s) | 79 |
| GluI | GCNGC | 3 cut(s) | 36, 39, 252 |
| HhaI | GCGC | 1 cut(s) | 80 |
| Hin6I | GCGC | 1 cut(s) | 78 |
| HinP1I | GCGC | 1 cut(s) | 78 |
| HindIII | AAGCTT | 1 cut(s) | 1169 |
| HinfI | GANTC | 6 cut(s) | 565, 593, 802, 1144, 1231, 1678 |
| HphI | GGTGA | 2 cut(s) | 278, 1444 |
| Hpy166II | GTNNAC | 4 cut(s) | 65, 499, 1448, 1732 |
| Hpy188I | TCNGA | 6 cut(s) | 296, 656, 859, 1082, 1138, 1677 |
| Hpy188III | TCNNGA | 5 cut(s) | 131, 842, 1148, 1300, 1400 |
| Hpy8I | GTNNAC | 4 cut(s) | 65, 499, 1448, 1732 |
| Hpy99I | CGWCG | 2 cut(s) | 590, 593 |
| HpyAV | CCTTC | 2 cut(s) | 345, 1550 |
| HpyCH4III | ACNGT | 7 cut(s) | 32, 324, 373, 696, 1205, 1379, 1603 |
| HpyCH4V | TGCA | 9 cut(s) | 41, 401, 481, 898, 962, 1042, 1054, 1278, 1634 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 959, 1363, 1640 |
| HpyF3I | CTNAG | 3 cut(s) | 341, 353, 1240 |
| HspAI | GCGC | 1 cut(s) | 78 |
| Kzo9I | GATC | 9 cut(s) | 118, 175, 266, 869, 1109, 1269, 1371, 1475, 1587 |
| LguI | GCTCTTC | 1 cut(s) | 1433 |
| LmnI | GCTCC | 4 cut(s) | 199, 437, 656, 1408 |
| Lsp1109I | GCAGC | 3 cut(s) | 22, 25, 263 |
| LweI | GCATC | 3 cut(s) | 835, 1376, 1413 |
| MaeI | CTAG | 2 cut(s) | 359, 1566 |
| MaeIII | GTNAC | 2 cut(s) | 284, 1432 |
| MalI | GATC | 9 cut(s) | 120, 177, 268, 871, 1111, 1271, 1373, 1477, 1589 |
| MboI | GATC | 9 cut(s) | 118, 175, 266, 869, 1109, 1269, 1371, 1475, 1587 |
| MfeI | CAATTG | 1 cut(s) | 609 |
| MflI | RGATCY | 1 cut(s) | 175 |
| MhlI | GDGCHC | 2 cut(s) | 434, 797 |
| MlyI | GAGTC | 1 cut(s) | 1687 |
| MmeI | TCCRAC | 5 cut(s) | 459, 882, 1105, 1525, 1602 |
| MseI | TTAA | 6 cut(s) | 312, 407, 519, 531, 782, 1317 |
| MslI | CAYNNNNRTG | 1 cut(s) | 60 |
| MspR9I | CCNGG | 2 cut(s) | 60, 173 |
| MunI | CAATTG | 1 cut(s) | 609 |
| MvaI | CCWGG | 2 cut(s) | 60, 173 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 959, 1363, 1640 |
| NdeII | GATC | 9 cut(s) | 118, 175, 266, 869, 1109, 1269, 1371, 1475, 1587 |
| NheI | GCTAGC | 1 cut(s) | 358 |
| NlaIV | GGNNCC | 3 cut(s) | 177, 433, 1410 |
| NmuCI | GTSAC | 2 cut(s) | 284, 1432 |
| NsbI | TGCGCA | 1 cut(s) | 79 |
| NspI | RCATGY | 3 cut(s) | 710, 865, 1040 |
| NspV | TTCGAA | 1 cut(s) | 754 |
| OliI | CACNNNNGTG | 1 cut(s) | 60 |
| PagI | TCATGA | 2 cut(s) | 130, 1147 |
| PciSI | GCTCTTC | 1 cut(s) | 1433 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 831 |
| PfeI | GAWTC | 5 cut(s) | 565, 593, 802, 1144, 1231 |
| PfoI | TCCNGGA | 1 cut(s) | 171 |
| PkrI | GCNGC | 3 cut(s) | 37, 40, 253 |
| PleI | GAGTC | 1 cut(s) | 1686 |
| PpsI | GAGTC | 1 cut(s) | 1686 |
| PshBI | ATTAAT | 1 cut(s) | 531 |
| Psp6I | CCWGG | 2 cut(s) | 58, 171 |
| PspGI | CCWGG | 2 cut(s) | 58, 171 |
| PspN4I | GGNNCC | 3 cut(s) | 177, 433, 1410 |
| PstI | CTGCAG | 1 cut(s) | 43 |
| PsuI | RGATCY | 1 cut(s) | 175 |
| RsaI | GTAC | 9 cut(s) | 29, 66, 191, 513, 632, 742, 1075, 1449, 1495 |
| RsaNI | GTAC | 9 cut(s) | 28, 65, 190, 512, 631, 741, 1074, 1448, 1494 |
| RseI | CAYNNNNRTG | 1 cut(s) | 60 |
| SapI | GCTCTTC | 1 cut(s) | 1433 |
| SaqAI | TTAA | 6 cut(s) | 312, 407, 519, 531, 782, 1317 |
| SatI | GCNGC | 3 cut(s) | 36, 39, 252 |
| Sau3AI | GATC | 9 cut(s) | 118, 175, 266, 869, 1109, 1269, 1371, 1475, 1587 |
| ScaI | AGTACT | 1 cut(s) | 742 |
| SchI | GAGTC | 1 cut(s) | 1687 |
| ScrFI | CCNGG | 2 cut(s) | 60, 173 |
| SduI | GDGCHC | 2 cut(s) | 434, 797 |
| SfaNI | GCATC | 3 cut(s) | 835, 1376, 1413 |
| SfcI | CTRYAG | 3 cut(s) | 39, 550, 1375 |
| SfuI | TTCGAA | 1 cut(s) | 754 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 60 |
| SmlI | CTYRAG | 2 cut(s) | 1298, 1505 |
| SmoI | CTYRAG | 2 cut(s) | 1298, 1505 |
| SsiI | CCGC | 1 cut(s) | 1175 |
| SspI | AATATT | 1 cut(s) | 141 |
| SspMI | CTAG | 2 cut(s) | 359, 1566 |
| StyD4I | CCNGG | 2 cut(s) | 58, 171 |
| TaaI | ACNGT | 7 cut(s) | 32, 324, 373, 696, 1205, 1379, 1603 |
| TatI | WGTACW | 4 cut(s) | 511, 740, 1073, 1447 |
| TfiI | GAWTC | 5 cut(s) | 565, 593, 802, 1144, 1231 |
| Tru1I | TTAA | 6 cut(s) | 312, 407, 519, 531, 782, 1317 |
| Tru9I | TTAA | 6 cut(s) | 312, 407, 519, 531, 782, 1317 |
| TscAI | CASTG | 5 cut(s) | 37, 701, 905, 964, 1450 |
| TseFI | GTSAC | 2 cut(s) | 284, 1432 |
| TseI | GCWGC | 3 cut(s) | 35, 38, 251 |
| Tsp45I | GTSAC | 2 cut(s) | 284, 1432 |
| TspDTI | ATGAA | 6 cut(s) | 537, 735, 815, 1106, 1276, 1737 |
| TspRI | CASTG | 5 cut(s) | 37, 701, 905, 964, 1450 |
| VspI | ATTAAT | 1 cut(s) | 531 |
| XapI | RAATTY | 3 cut(s) | 734, 890, 1255 |
| XceI | RCATGY | 3 cut(s) | 710, 865, 1040 |
| XspI | CTAG | 2 cut(s) | 359, 1566 |
| ZrmI | AGTACT | 1 cut(s) | 742 |