Rh3CG366800

Cyclic nucleotide-gated ion channel 1-like

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3C
Physical Location & Seq
Reverse (-)
46212593 .. 46226713
14121 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3CG366800.1

Sequence Viewer

Length: 1692 bp
ATGAAATTCTCGGCTCCACGGCTCTATAGATATATCAGATTCCTTTCACATCATCCTATTTTAGGCTTTGTAAGTTTCATAGCCCATATAATACCAGTGTACTTGTGCCCATTCATACGCACTGTCGATCTTCTCGCTGCTGGTGATGTTCCAGTTGTTGCCCTACCATCTGTGGTGTATCTGTTCTTGGATCCTCTGTTTCTATATGCTCCTTTAATCAACGGGGACACCAAGTGTCTCGTGTTAGACCACAGATTGAAGATAACAGCTCTTGTTTTTCGATCTTGGGGAGATCTTCATTACCTAGTAAAGATGTTTGAAGGCCTTCGGCGGAAGGGCCCTATCTCTAAGAAACTGTCGGGGCTGGCAATTGACACGCTGGCTATTCTACCTATTCCACAAGTTACAATCTTAGTTTTTCTTCCGAAGATGAGGGGCTCCAACTCTTTGAAGACAATGAAGGTTCTCACCTCCCTTATTGTACTGCAATATCTGCCACGAGGTTACCCCCTCTATCAACTGTGCAGTACGTGGAATACATGGACCATTGGCGGTACGGGATACAAGCTTCCAAATTGGTCTTTAATTGTCATCAATATCTATGGGTACATTATTGCCAGCCATATATTCGGAGCATTTTGGTACTTTTTCTCCATCCAACGAGAGATAGAGTGTTGGGGGGAACATGCTTGCAGAATTGAAAATGGATGTGAATTTAGTACTTCATGTGTTCAAAATACATACAGAAATATCACACTTTTGAAGAACTTGTGCCCTATAGATCCCCCAGATAAACAAATATTCGATTTTGGCATATTTCGTGATGCTTTACAATCCGGCATTCAAGGATCAACAAATTTTTCACAAAAATGGCTGCGATGTTTTTCGTGGGGCATACGAAATCTAAGTTCTTTTGGTTCAAACCTTGGTGATACCAGTGCATATGGATGGGAAAACTTGTTTGTGGTTCTCATTTCGATAAGTGGCTTGCTACTGTTTATGTATCTCTTGGGTCACGTGCAGGAAATTATGCAGAAGGTCTACAAACCAATTAAAGAAATGATTAATATACGATCCATATTACATGAATATGGCCTGTCTGATGATGAGAATCATGGGATGGAGAAGAAAATCACGCTTGTGGTAAAGTCTAAACTTCAACACGTTGACAACCCTATTGTGGAGAATATGTCTTCAATTCTTTCCCTAGTAGAAGATAAAAAATTTACTATGCAGATCAGACGCAAACTCTTCATGGATAAACTCAAGAAAGTCCATGGGCTTAAAGATAGAACGGAAGAAGTTTTGGAAAAAATTTGTGAGCGTCTTGAGCCAATGATCTATAGGAAGGGAAGCTACATTATTCGAGAGGGGGAGCCACTTGATATGATGTTCTTCGTCACATGGGGCAATGTACTCACCTATGCGACTAATAATGGTGGATCAAATGGTTCTTCAGGTACCATCCAACATGAGAACGAGAAAGATGATCTGTATGGTAAAGAGCTTCTAACTTGGGCAGAAGAGCGTTCTGGCAAATTGTCCGACTTACCGATCTCTCCCATAACTGTCAAGTCCCACAACAAAGTTGAAGTCTTTGCTCTCCAAGCTACCGTTTTACAGCTTGTTGTCTCTCAATTCCAAAGTCAGTTCAATCTCACCATAGCTGTCAATAATGAAATAGTGAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

563

Amino Acids

64.28

Weight (kDa)

8.86

Isoelectric Point (pI)

31.14

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000017)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07351 FvH4_1g11800 FvH4_1g11800 FvH4_1g11800 FvH4_1g11800 FvH4_1g11800 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_4g14360 FvH4_6g13561 FvH4_6g13562 FvH4_6g13580 FvH4_6g13590 FvH4_6g13590 FvH4_6g13590 FvH4_6g13731 FvH4_6g13770 FvH4_6g13800 FvH4_6g13800 FvH4_6g13860 FvH4_6g13870 FvH4_6g13870 FvH4_6g13870 FvH4_6g13870 FvH4_6g13870 FvH4_6g13890 FvH4_6g33801 FvH4_7g13020 FvH4_7g13270 FvH4_7g13270 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g14580 FvH4_7g14580 FvH4_7g14580 FvH4_7g14600 FvH4_7g14600 FvH4_7g20030 FvH4_7g20510 FvH4_7g20510 FvH4_7g20510 FvH4_7g20670 FvH4_7g20670 FvH4_7g20670 FvH4_7g20670 FvH4_7g20690 FvH4_7g20690 FvH4_7g31930 FvH4_7g31930 FvH4_7g31940 FvH4_7g31940
malus_domestica MD01G1115700.v1.1 MD01G1115800.v1.1 MD01G1116600.v1.1 MD01G1116700.v1.1 MD01G1117000.v1.1 MD01G1225000.v1.1 MD02G1077900.v1.1 MD02G1078000.v1.1 MD02G1078200.v1.1 MD02G1078400.v1.1 MD02G1084300.v1.1 MD04G1004700.v1.1 MD04G1123100.v1.1 MD04G1123200.v1.1 MD04G1128000.v1.1 MD04G1128400.v1.1 MD05G1299700.v1.1 MD05G1300000.v1.1 MD07G1184000.v1.1 MD07G1292300.v1.1 MD08G1214800.v1.1
prunus_persica Prupe.1G205100_v2.0.a1 Prupe.1G205100_v2.0.a1 Prupe.1G205200_v2.0.a1 Prupe.2G222300_v2.0.a1 Prupe.2G223300_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223600_v2.0.a1 Prupe.2G223600_v2.0.a1 Prupe.2G223600_v2.0.a1 Prupe.2G223700_v2.0.a1 Prupe.2G223700_v2.0.a1 Prupe.2G223700_v2.0.a1 Prupe.2G223700_v2.0.a1 Prupe.2G223800_v2.0.a1 Prupe.2G223900_v2.0.a1 Prupe.2G224000_v2.0.a1 Prupe.5G162000_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G291000_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G210400_v2.0.a1 Prupe.7G210600_v2.0.a1 Prupe.7G210700_v2.0.a1 Prupe.7G210800_v2.0.a1 Prupe.7G210900_v2.0.a1 Prupe.8G097600_v2.0.a1 Prupe.8G097800_v2.0.a1 Prupe.8G097800_v2.0.a1
pyrus_communis pycom01g14430 pycom01g14440 pycom01g23130 pycom01g23160 pycom01g23330 pycom02g06210 pycom02g06220 pycom02g06250 pycom02g06270 pycom02g06710 pycom03g05360 pycom03g05380 pycom04g11470 pycom04g11480 pycom04g11520 pycom04g11560 pycom04g11600 pycom04g11610 pycom04g11650 pycom04g11660 pycom04g11670 pycom05g27790 pycom07g17630 pycom08g20960 pycom126g00020 pycom126g00030
rosa_chinensis RchiOBHm_Chr1g0318251 RchiOBHm_Chr1g0318731 RchiOBHm_Chr1g0339101 RchiOBHm_Chr1g0339111 RchiOBHm_Chr1g0347151 RchiOBHm_Chr1g0347161 RchiOBHm_Chr1g0347221 RchiOBHm_Chr1g0352401 RchiOBHm_Chr1g0352441 RchiOBHm_Chr1g0352461 RchiOBHm_Chr1g0356131 RchiOBHm_Chr1g0363991 RchiOBHm_Chr1g0364791 RchiOBHm_Chr1g0364801 RchiOBHm_Chr1g0364811 RchiOBHm_Chr1g0364851 RchiOBHm_Chr1g0364951 RchiOBHm_Chr1g0370821 RchiOBHm_Chr1g0381221 RchiOBHm_Chr1g0381231 RchiOBHm_Chr1g0381261 RchiOBHm_Chr1g0381271 RchiOBHm_Chr1g0381341 RchiOBHm_Chr1g0381351 RchiOBHm_Chr1g0381391 RchiOBHm_Chr1g0381801 RchiOBHm_Chr1g0381821 RchiOBHm_Chr2g0093241 RchiOBHm_Chr2g0116391 RchiOBHm_Chr3g0466441 RchiOBHm_Chr3g0466631 RchiOBHm_Chr3g0466651 RchiOBHm_Chr3g0496921 RchiOBHm_Chr4g0400441 RchiOBHm_Chr4g0400501 RchiOBHm_Chr4g0400511 RchiOBHm_Chr4g0400691 RchiOBHm_Chr4g0400701 RchiOBHm_Chr4g0404331 RchiOBHm_Chr5g0052101 RchiOBHm_Chr5g0052111 RchiOBHm_Chr5g0052171 RchiOBHm_Chr5g0052181 RchiOBHm_Chr6g0264161 RchiOBHm_Chr6g0265551 RchiOBHm_Chr7g0213571 RchiOBHm_Chr7g0213581
rosa_laevigata RLG00000002796 RLG00000003261 RLG00000007935 RLG00000007936 RLG00000009187 RLG00000014179 RLG00000016381 RLG00000018265 RLG00000024558 RLG00000024574 RLG00000026232 RLG00000026234 RLG00000026236 RLG00000026237 RLG00000027459 RLG00000027461 RLG00000027463 RLG00000027530 RLG00000028103 RLG00000028304 RLG00000028333 RLG00000029214 RLG00000029848 RLG00000029951 RLG00000030115 RLG00000030552 RLG00000033668 RLG00000034840 RLG00000034841 RLG00000034842 RLG00000035830
rosa_multiflora Rmu_sc0000654.1_g000004 Rmu_sc0000675.1_g000025 Rmu_sc0001075.1_g000002 Rmu_sc0001726.1_g000004 Rmu_sc0001772.1_g000061 Rmu_sc0001772.1_g000065 Rmu_sc0002067.1_g000002 Rmu_sc0002183.1_g000001 Rmu_sc0002183.1_g000006 Rmu_sc0002244.1_g000003 Rmu_sc0002313.1_g000004 Rmu_sc0002319.1_g000004 Rmu_sc0002539.1_g000085 Rmu_sc0002636.1_g000004 Rmu_sc0003229.1_g000007 Rmu_sc0003313.1_g000020 Rmu_sc0003546.1_g000007 Rmu_sc0003724.1_g000015 Rmu_sc0003936.1_g000029 Rmu_sc0004191.1_g000067 Rmu_sc0004525.1_g000012 Rmu_sc0005122.1_g000009 Rmu_sc0005255.1_g000040 Rmu_sc0005338.1_g000016 Rmu_sc0005584.1_g000008 Rmu_sc0006460.1_g000013 Rmu_sc0006872.1_g000011 Rmu_sc0006872.1_g000015 Rmu_sc0006872.1_g000016 Rmu_sc0006952.1_g000013 Rmu_sc0007342.1_g000005 Rmu_sc0007342.1_g000006 Rmu_sc0008418.1_g000003 Rmu_sc0008418.1_g000006 Rmu_sc0008636.1_g000007 Rmu_sc0008636.1_g000008 Rmu_sc0009205.1_g000014 Rmu_sc0009365.1_g000014 Rmu_sc0009917.1_g000002 Rmu_sc0019289.1_g000003 Rmu_ssc0000098.1_g000011 Rmu_ssc0000098.1_g000012 Rmu_ssc0000167.1_g000018 Rmu_ssc0000167.1_g000024 Rmu_ssc0000326.1_g000015
rosa_roxburghii Rroxscaffold_166G00440780 Rroxscaffold_176G00431500 Rroxscaffold_1G00015080 Rroxscaffold_1G00027880 Rroxscaffold_1G00027890 Rroxscaffold_1G00027920 Rroxscaffold_2G00127250 Rroxscaffold_2G00148380 Rroxscaffold_3G00219450 Rroxscaffold_3G00232170 Rroxscaffold_3G00232210 Rroxscaffold_3G00242230 Rroxscaffold_3G00242240 Rroxscaffold_3G00244790 Rroxscaffold_3G00245790 Rroxscaffold_4G00278400 Rroxscaffold_4G00278430 Rroxscaffold_4G00278670 Rroxscaffold_4G00278680 Rroxscaffold_4G00278690 Rroxscaffold_4G00278700 Rroxscaffold_4G00278720 Rroxscaffold_4G00291690 Rroxscaffold_4G00292070 Rroxscaffold_4G00292090 Rroxscaffold_4G00292770 Rroxscaffold_4G00302240 Rroxscaffold_4G00302860 Rroxscaffold_4G00311320 Rroxscaffold_4G00311330 Rroxscaffold_4G00320570 Rroxscaffold_4G00322050 Rroxscaffold_4G00329480 Rroxscaffold_4G00329730 Rroxscaffold_5G00345500 Rroxscaffold_5G00345510 Rroxscaffold_5G00360830 Rroxscaffold_5G00360840 Rroxscaffold_6G00393450 Rroxscaffold_6G00404030 Rroxscaffold_6G00414220 Rroxscaffold_6G00414230 Rroxscaffold_6G00414280 Rroxscaffold_6G00414290 Rroxscaffold_6G00414350 Rroxscaffold_6G00414470 Rroxscaffold_7G00202570 Rroxscaffold_7G00203460 Rroxscaffold_7G00203470
rosa_rugosa Rorug01G0020500 Rorug01G0020600 Rorug01G0020700 Rorug01G0143700.1 Rorug01G0225700 Rorug01G0228500 Rorug01G0228600 Rorug01G0228600 Rorug01G0228700 Rorug01G0228800 Rorug01G0228800 Rorug01G0229000 Rorug01G0229300 Rorug01G0229400 Rorug01G0229600 Rorug01G0229700 Rorug01G0232200 Rorug01G0232600 Rorug01G0232600 Rorug01G0311900 Rorug01G0311900 Rorug01G0318400 Rorug01G0318500 Rorug01G0318500 Rorug01G0318500 Rorug01G0427900 Rorug01G0427900 Rorug01G0428000 Rorug01G0428200 Rorug01G0428300 Rorug01G0428400 Rorug01G0431500 Rorug01G0431600 Rorug01G0431600 Rorug02G0033800 Rorug02G0206300 Rorug03G0081900 Rorug03G0083200 Rorug03G0083200 Rorug03G0083300 Rorug04G0025100 Rorug04G0025100 Rorug04G0025200 Rorug04G0025300 Rorug04G0058600 Rorug04G0058700 Rorug04G0058800 Rorug04G0098400 Rorug04G0098500 Rorug05G0274500 Rorug05G0274600 Rorug05G0274800 Rorug06G0008500 Rorug06G0009100 Rorug06G0018000
rosa_samantha Rh1AG031700 Rh1AG036100 Rh1AG089800 Rh1AG239800 Rh1AG239900 Rh1AG242000 Rh1AG242300 Rh1AG245600 Rh1AG262600 Rh1AG319700 Rh1AG319800 Rh1AG319900 Rh1AG327200 Rh1AG451100 Rh1AG451200 Rh1AG451300 Rh1AG451600 Rh1AG451700 Rh1BG027200 Rh1BG071600 Rh1BG090700 Rh1BG211000 Rh1BG213000 Rh1BG213500 Rh1BG282800 Rh1BG288400 Rh1BG408100 Rh1BG408200 Rh1BG408400 Rh1BG408700 Rh1CG026300 Rh1CG028300 Rh1CG224100 Rh1CG226000 Rh1CG226100 Rh1CG229300 Rh1CG229400 Rh1CG245900 Rh1CG299200 Rh1CG299400 Rh1CG299500 Rh1CG303300 Rh1CG305100 Rh1CG422500 Rh1CG422600 Rh1CG422700 Rh1CG422800 Rh1CG422900 Rh1CG423100 Rh1CG423300 Rh1CG423400 Rh1CG426300 Rh1CG426600 Rh1DG239300 Rh1DG239600 Rh1DG258300 Rh1DG314200 Rh1DG314300 Rh1DG314400 Rh1DG320000 Rh1DG439200 Rh1DG439400 Rh1DG439500 Rh1DG439700 Rh1DG440000 Rh1DG443800 Rh2AG261800 Rh2BG080900 Rh2CG083300 Rh2DG078900 Rh2DG270000 Rh2DG270100 Rh3AG128400 Rh3AG130100 Rh3AG130500 Rh3AG332500 Rh3AG332600 Rh3AG332800 Rh3BG149700 Rh3BG151500 Rh3CG151400 Rh3CG354500 Rh3CG366800 Rh3DG150500 Rh3DG152200 Rh4AG101400 Rh4AG102900 Rh4AG148300 Rh4AG148600 Rh4BG098000 Rh4CG111100 Rh4CG111300 Rh4CG155100 Rh4DG094800 Rh5AG213600 Rh5AG346900 Rh5AG347000 Rh5BG357500 Rh5BG357700 Rh5BG485400 Rh5CG383100 Rh5CG383200 Rh5CG383300 Rh5CG509900 Rh5DG373000 Rh5DG373200 Rh6BG054300 Rh6BG126300 Rh6CG125100 Rh6CG185300 Rh6DG177000 Rh7AG276100 Rh7AG276200 Rh7BG230500 Rh7BG270500 Rh7BG364000 Rh7CG250100 Rh7CG295200 Rh7CG295300 Rh7DG389700
rosa_wichuraiana Rw0G001190 Rw0G010680 Rw0G013360 Rw0G014310 Rw0G014890 Rw0G020310 Rw0G021350 Rw0G022510 Rw1G003360 Rw1G004330 Rw1G006930 Rw1G008310 Rw1G021090 Rw1G021150 Rw1G021210 Rw1G023200 Rw1G023210 Rw1G028340 Rw1G028350 Rw1G028990 Rw1G032510 Rw1G039370 Rw1G039400 Rw1G039410 Rw1G039420 Rw1G039430 Rw2G006700 Rw2G020550 Rw2G020580 Rw3G012130 Rw3G012300 Rw3G012310 Rw3G028220 Rw3G029230 Rw5G021600 Rw5G032790 Rw6G011240 Rw7G027670 Rw7G032780

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1460
AccB1I GGYRCC 1 cut(s) 1460
AccI GTMKAC 1 cut(s) 1041
AciI CCGC 2 cut(s) 331, 552
AclWI GGATC 6 cut(s) 185, 198, 776, 856, 1068, 1450
AcsI RAATTY 5 cut(s) 5, 713, 856, 1223, 1314
AcuI CTGAAG 1 cut(s) 1440
AcvI CACGTG 1 cut(s) 1018
AdeI CACNNNGTG 1 cut(s) 234
AfaI GTAC 9 cut(s) 101, 483, 529, 556, 608, 644, 721, 1416, 1462
AfiI CCNNNNNNNGG 2 cut(s) 62, 1180
AflIII ACRYGT 1 cut(s) 1162
AleI CACNNNNGTG 1 cut(s) 1139
AluBI AGCT 7 cut(s) 269, 568, 1356, 1507, 1610, 1624, 1667
AluI AGCT 7 cut(s) 269, 568, 1356, 1507, 1610, 1624, 1667
Alw26I GTCTC 2 cut(s) 242, 1636
AlwI GGATC 6 cut(s) 185, 198, 776, 856, 1068, 1450
AoxI GGCC 3 cut(s) 322, 337, 1093
ApaI GGGCCC 1 cut(s) 341
ApeKI GCWGC 2 cut(s) 137, 874
ApoI RAATTY 5 cut(s) 5, 713, 856, 1223, 1314
ArsI GACNNNNNNTTYG 2 cut(s) 1578, 1610
AseI ATTAAT 1 cut(s) 1065
Asp700I GAANNNNTTC 1 cut(s) 324
Asp718I GGTACC 1 cut(s) 1460
AspS9I GGNCC 3 cut(s) 337, 338, 543
AsuHPI GGTGA 5 cut(s) 155, 460, 941, 1411, 1651
AvaII GGWCC 1 cut(s) 543
BaeGI GKGCMC 3 cut(s) 110, 341, 776
BamHI GGATCC 1 cut(s) 190
BanI GGYRCC 1 cut(s) 1460
BanII GRGCYC 2 cut(s) 341, 440
BarI GAAGNNNNNNTAC 2 cut(s) 1340, 1372
BauI CACGAG 2 cut(s) 239, 498
BbrPI CACGTG 1 cut(s) 1018
BbsI GAAGAC 2 cut(s) 458, 1185
BbvI GCAGC 2 cut(s) 124, 861
BccI CCATC 5 cut(s) 175, 662, 942, 1114, 1472
BceAI ACGGC 1 cut(s) 35
BciVI GTATCC 1 cut(s) 554
BcoDI GTCTC 2 cut(s) 242, 1636
BfaI CTAG 2 cut(s) 305, 1208
BfmI CTRYAG 3 cut(s) 25, 777, 1342
BfuI GTATCC 1 cut(s) 554
BglII AGATCT 1 cut(s) 292
BisI GCNGC 2 cut(s) 138, 875
BlsI GCNGC 2 cut(s) 139, 876
BmcAI AGTACT 1 cut(s) 721
Bme18I GGWCC 1 cut(s) 543
BmgT120I GGNCC 3 cut(s) 337, 338, 543
BmiI GGNNCC 6 cut(s) 15, 192, 339, 439, 1377, 1462
BmsI GCATC 1 cut(s) 814
BpiI GAAGAC 2 cut(s) 458, 1185
BpuEI CTTGAG 2 cut(s) 1250, 1349
BsaAI YACGTR 2 cut(s) 531, 1018
BsaBI GATNNNNATC 1 cut(s) 1110
BsaJI CCNNGG 3 cut(s) 17, 925, 1276
BsaXI ACNNNNNCTCC 4 cut(s) 635, 665, 1175, 1205
Bsc4I CCNNNNNNNGG 2 cut(s) 62, 1180
Bse1I ACTGG 3 cut(s) 95, 152, 936
Bse3DI GCAATG 1 cut(s) 1417
Bse8I GATNNNNATC 1 cut(s) 1110
BseDI CCNNGG 3 cut(s) 17, 925, 1276
BseGI GGATG 6 cut(s) 52, 654, 713, 953, 1125, 1464
BseJI GATNNNNATC 1 cut(s) 1110
BseLI CCNNNNNNNGG 2 cut(s) 62, 1180
BseMI GCAATG 1 cut(s) 1417
BseNI ACTGG 3 cut(s) 95, 152, 936
BseSI GKGCMC 3 cut(s) 110, 341, 776
BseXI GCAGC 2 cut(s) 124, 861
BsgI GTGCAG 2 cut(s) 544, 1040
BshFI GGCC 3 cut(s) 324, 339, 1095
BshNI GGYRCC 1 cut(s) 1460
BsiSI CCGG 1 cut(s) 837
BslFI GGGAC 2 cut(s) 239, 1561
BslI CCNNNNNNNGG 2 cut(s) 62, 1180
BsmAI GTCTC 2 cut(s) 242, 1636
BsmFI GGGAC 2 cut(s) 239, 1561
BsmI GAATGC 1 cut(s) 840
BsnI GGCC 3 cut(s) 324, 339, 1095
Bsp120I GGGCCC 1 cut(s) 337
Bsp1286I GDGCHC 4 cut(s) 110, 341, 440, 776
Bsp19I CCATGG 1 cut(s) 1276
BspACI CCGC 2 cut(s) 331, 552
BspANI GGCC 3 cut(s) 324, 339, 1095
BspLI GGNNCC 6 cut(s) 15, 192, 339, 439, 1377, 1462
BspPI GGATC 6 cut(s) 185, 198, 776, 856, 1068, 1450
BspQI GCTCTTC 1 cut(s) 1518
BspT107I GGYRCC 1 cut(s) 1460
BsrDI GCAATG 1 cut(s) 1417
BsrI ACTGG 3 cut(s) 95, 152, 936
BssECI CCNNGG 3 cut(s) 17, 925, 1276
BssSI CACGAG 2 cut(s) 239, 498
BssT1I CCWWGG 2 cut(s) 925, 1276
Bst2BI CACGAG 2 cut(s) 239, 498
Bst4CI ACNGT 6 cut(s) 124, 357, 522, 996, 1570, 1615
Bst6I CTCTTC 2 cut(s) 1256, 1518
BstAPI GCANNNNNTGC 1 cut(s) 493
BstBAI YACGTR 2 cut(s) 531, 1018
BstC8I GCNNGC 5 cut(s) 366, 381, 619, 691, 989
BstDEI CTNAG 3 cut(s) 348, 412, 905
BstDSI CCRYGG 2 cut(s) 17, 1276
BstEII GGTNACC 1 cut(s) 503
BstENI CCTNNNNNAGG 1 cut(s) 60
BstF5I GGATG 6 cut(s) 52, 654, 713, 953, 1125, 1464
BstMAI GTCTC 2 cut(s) 242, 1636
BstMWI GCNNNNNNNGC 3 cut(s) 493, 1330, 1607
BstNSI RCATGY 1 cut(s) 689
BstPI GGTNACC 1 cut(s) 503
BstSFI CTRYAG 3 cut(s) 25, 777, 1342
BstSLI GKGCMC 3 cut(s) 110, 341, 776
BstV1I GCAGC 2 cut(s) 124, 861
BstV2I GAAGAC 2 cut(s) 458, 1185
BstX2I RGATCY 3 cut(s) 190, 292, 781
BstYI RGATCY 3 cut(s) 190, 292, 781
BsuI GTATCC 1 cut(s) 554
BsuRI GGCC 3 cut(s) 324, 339, 1095
BtgI CCRYGG 2 cut(s) 17, 1276
BtgZI GCGATG 1 cut(s) 892
BtsCI GGATG 6 cut(s) 52, 654, 713, 953, 1125, 1464
BtsIMutI CAGTG 3 cut(s) 102, 120, 943
Cac8I GCNNGC 5 cut(s) 366, 381, 619, 691, 989
Cfr13I GGNCC 3 cut(s) 337, 338, 543
CseI GACGC 2 cut(s) 1251, 1313
Csp6I GTAC 9 cut(s) 100, 482, 528, 555, 607, 643, 720, 1415, 1461
CviAII CATG 9 cut(s) 540, 686, 726, 1085, 1115, 1255, 1277, 1404, 1472
CviQI GTAC 9 cut(s) 100, 482, 528, 555, 607, 643, 720, 1415, 1461
DdeI CTNAG 3 cut(s) 348, 412, 905
DraIII CACNNNGTG 1 cut(s) 234
Eam1104I CTCTTC 2 cut(s) 1256, 1518
EarI CTCTTC 2 cut(s) 1256, 1518
EciI GGCGGA 1 cut(s) 346
Eco130I CCWWGG 2 cut(s) 925, 1276
Eco147I AGGCCT 1 cut(s) 324
Eco24I GRGCYC 2 cut(s) 341, 440
Eco47I GGWCC 1 cut(s) 543
Eco57I CTGAAG 1 cut(s) 1440
Eco72I CACGTG 1 cut(s) 1018
Eco91I GGTNACC 1 cut(s) 503
EcoNI CCTNNNNNAGG 1 cut(s) 60
EcoO109I RGGNCCY 2 cut(s) 337, 338
EcoO65I GGTNACC 1 cut(s) 503
EcoT14I CCWWGG 2 cut(s) 925, 1276
EcoT38I GRGCYC 2 cut(s) 341, 440
ErhI CCWWGG 2 cut(s) 925, 1276
FaeI CATG 9 cut(s) 543, 689, 729, 1088, 1118, 1258, 1280, 1407, 1475
FaqI GGGAC 2 cut(s) 239, 1561
FatI CATG 9 cut(s) 539, 685, 725, 1084, 1114, 1254, 1276, 1403, 1471
FauNDI CATATG 1 cut(s) 943
FblI GTMKAC 1 cut(s) 1041
Fnu4HI GCNGC 2 cut(s) 138, 875
FokI GGATG 6 cut(s) 39, 641, 720, 960, 1132, 1451
FriOI GRGCYC 2 cut(s) 341, 440
Fsp4HI GCNGC 2 cut(s) 138, 875
FspBI CTAG 2 cut(s) 305, 1208
GluI GCNGC 2 cut(s) 138, 875
HaeIII GGCC 3 cut(s) 324, 339, 1095
HapII CCGG 1 cut(s) 837
HgaI GACGC 2 cut(s) 1251, 1313
Hin1II CATG 9 cut(s) 543, 689, 729, 1088, 1118, 1258, 1280, 1407, 1475
HincII GTYRAC 1 cut(s) 1168
HindII GTYRAC 1 cut(s) 1168
HindIII AAGCTT 1 cut(s) 566
HinfI GANTC 2 cut(s) 39, 1111
HpaII CCGG 1 cut(s) 837
HphI GGTGA 5 cut(s) 155, 460, 941, 1411, 1651
Hpy166II GTNNAC 3 cut(s) 100, 1042, 1168
Hpy188I TCNGA 6 cut(s) 38, 426, 632, 1102, 1241, 1546
Hpy188III TCNNGA 4 cut(s) 821, 1267, 1328, 1367
Hpy8I GTNNAC 3 cut(s) 100, 1042, 1168
HpyAV CCTTC 6 cut(s) 314, 328, 335, 454, 1030, 1342
HpyCH4III ACNGT 6 cut(s) 124, 357, 522, 996, 1570, 1615
HpyCH4IV ACGT 3 cut(s) 530, 1017, 1164
HpyCH4V TGCA 7 cut(s) 487, 525, 693, 941, 1021, 1033, 1234
HpyF10VI GCNNNNNNNGC 3 cut(s) 493, 1330, 1607
HpyF3I CTNAG 3 cut(s) 348, 412, 905
HpySE526I ACGT 3 cut(s) 530, 1017, 1164
Hsp92II CATG 9 cut(s) 543, 689, 729, 1088, 1118, 1258, 1280, 1407, 1475
KpnI GGTACC 1 cut(s) 1464
LguI GCTCTTC 1 cut(s) 1518
LmnI GCTCC 5 cut(s) 19, 214, 443, 632, 1375
Lsp1109I GCAGC 2 cut(s) 124, 861
LweI GCATC 1 cut(s) 814
MaeI CTAG 2 cut(s) 305, 1208
MaeII ACGT 3 cut(s) 530, 1017, 1164
MaeIII GTNAC 4 cut(s) 403, 503, 1013, 1399
MfeI CAATTG 1 cut(s) 369
MflI RGATCY 3 cut(s) 190, 292, 781
MhlI GDGCHC 4 cut(s) 110, 341, 440, 776
MmeI TCCRAC 4 cut(s) 465, 682, 1492, 1569
MnlI CCTC 6 cut(s) 204, 426, 481, 494, 521, 1363
MroXI GAANNNNTTC 1 cut(s) 324
MseI TTAA 6 cut(s) 215, 584, 1053, 1065, 1284, 1690
MslI CAYNNNNRTG 4 cut(s) 868, 946, 1089, 1139
MspI CCGG 1 cut(s) 837
MunI CAATTG 1 cut(s) 369
Mva1269I GAATGC 1 cut(s) 840
MwoI GCNNNNNNNGC 3 cut(s) 493, 1330, 1607
NcoI CCATGG 1 cut(s) 1276
NdeI CATATG 1 cut(s) 943
NlaIII CATG 9 cut(s) 543, 689, 729, 1088, 1118, 1258, 1280, 1407, 1475
NlaIV GGNNCC 6 cut(s) 15, 192, 339, 439, 1377, 1462
NmuCI GTSAC 2 cut(s) 1013, 1399
NspI RCATGY 1 cut(s) 689
OliI CACNNNNGTG 1 cut(s) 1139
PceI AGGCCT 1 cut(s) 324
PciSI GCTCTTC 1 cut(s) 1518
PctI GAATGC 1 cut(s) 840
PdmI GAANNNNTTC 1 cut(s) 324
PfeI GAWTC 2 cut(s) 39, 1111
PkrI GCNGC 2 cut(s) 139, 876
PmaCI CACGTG 1 cut(s) 1018
PmlI CACGTG 1 cut(s) 1018
Ppu21I YACGTR 2 cut(s) 531, 1018
PshBI ATTAAT 1 cut(s) 1065
PspCI CACGTG 1 cut(s) 1018
PspEI GGTNACC 1 cut(s) 503
PspN4I GGNNCC 6 cut(s) 15, 192, 339, 439, 1377, 1462
PspOMI GGGCCC 1 cut(s) 337
PspPI GGNCC 3 cut(s) 337, 338, 543
PsuI RGATCY 3 cut(s) 190, 292, 781
RsaI GTAC 9 cut(s) 101, 483, 529, 556, 608, 644, 721, 1416, 1462
RsaNI GTAC 9 cut(s) 100, 482, 528, 555, 607, 643, 720, 1415, 1461
RseI CAYNNNNRTG 4 cut(s) 868, 946, 1089, 1139
SapI GCTCTTC 1 cut(s) 1518
SaqAI TTAA 6 cut(s) 215, 584, 1053, 1065, 1284, 1690
SatI GCNGC 2 cut(s) 138, 875
Sau96I GGNCC 3 cut(s) 337, 338, 543
ScaI AGTACT 1 cut(s) 721
SduI GDGCHC 4 cut(s) 110, 341, 440, 776
SfaNI GCATC 1 cut(s) 814
SfcI CTRYAG 3 cut(s) 25, 777, 1342
SinI GGWCC 1 cut(s) 543
SmiMI CAYNNNNRTG 4 cut(s) 868, 946, 1089, 1139
SmlI CTYRAG 2 cut(s) 1265, 1328
SmoI CTYRAG 2 cut(s) 1265, 1328
SseBI AGGCCT 1 cut(s) 324
SsiI CCGC 2 cut(s) 331, 552
SspI AATATT 1 cut(s) 801
SspMI CTAG 2 cut(s) 305, 1208
StuI AGGCCT 1 cut(s) 324
StyI CCWWGG 2 cut(s) 925, 1276
TaaI ACNGT 6 cut(s) 124, 357, 522, 996, 1570, 1615
TaiI ACGT 3 cut(s) 533, 1020, 1167
TaqI TCGA 5 cut(s) 126, 280, 804, 977, 1366
TatI WGTACW 4 cut(s) 99, 481, 719, 1414
TfiI GAWTC 2 cut(s) 39, 1111
Tru1I TTAA 6 cut(s) 215, 584, 1053, 1065, 1284, 1690
Tru9I TTAA 6 cut(s) 215, 584, 1053, 1065, 1284, 1690
TscAI CASTG 3 cut(s) 102, 127, 943
TseFI GTSAC 2 cut(s) 1013, 1399
TseI GCWGC 2 cut(s) 137, 874
Tsp45I GTSAC 2 cut(s) 1013, 1399
TspDTI ATGAA 9 cut(s) 17, 67, 103, 287, 473, 714, 1101, 1243, 1692
TspGWI ACGGA 1 cut(s) 1310
TspRI CASTG 3 cut(s) 102, 127, 943
VpaK11BI GGWCC 1 cut(s) 543
VspI ATTAAT 1 cut(s) 1065
XagI CCTNNNNNAGG 1 cut(s) 60
XapI RAATTY 5 cut(s) 5, 713, 856, 1223, 1314
XceI RCATGY 1 cut(s) 689
XmiI GTMKAC 1 cut(s) 1041
XmnI GAANNNNTTC 1 cut(s) 324
XspI CTAG 2 cut(s) 305, 1208
ZrmI AGTACT 1 cut(s) 721
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.