Cyclic nucleotide-gated ion channel 1-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 858 |
| AciI | CCGC | 2 cut(s) | 1359, 1640 |
| AcoI | YGGCCR | 1 cut(s) | 1458 |
| AcsI | RAATTY | 3 cut(s) | 416, 812, 844 |
| AcuI | CTGAAG | 1 cut(s) | 66 |
| AfaI | GTAC | 3 cut(s) | 584, 1332, 1623 |
| AfeI | AGCGCT | 1 cut(s) | 1160 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 82 |
| AflII | CTTAAG | 1 cut(s) | 77 |
| AflIII | ACRYGT | 1 cut(s) | 1513 |
| AjnI | CCWGG | 1 cut(s) | 552 |
| AjuI | GAANNNNNNNTTGG | 3 cut(s) | 31, 1463, 1495 |
| Alw21I | GWGCWC | 1 cut(s) | 577 |
| Alw26I | GTCTC | 1 cut(s) | 599 |
| Ama87I | CYCGRG | 1 cut(s) | 1135 |
| Aor51HI | AGCGCT | 1 cut(s) | 1160 |
| AoxI | GGCC | 3 cut(s) | 99, 1033, 1458 |
| ApeKI | GCWGC | 2 cut(s) | 806, 838 |
| ApoI | RAATTY | 3 cut(s) | 416, 812, 844 |
| AseI | ATTAAT | 1 cut(s) | 1527 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 824 |
| AspLEI | GCGC | 2 cut(s) | 838, 1161 |
| AspS9I | GGNCC | 5 cut(s) | 40, 148, 1425, 1550, 1615 |
| AsuHPI | GGTGA | 2 cut(s) | 239, 1394 |
| AvaI | CYCGRG | 1 cut(s) | 1135 |
| AvaII | GGWCC | 5 cut(s) | 40, 148, 1425, 1550, 1615 |
| BalI | TGGCCA | 1 cut(s) | 1460 |
| BanII | GRGCYC | 1 cut(s) | 577 |
| BauI | CACGAG | 1 cut(s) | 453 |
| BbsI | GAAGAC | 1 cut(s) | 191 |
| Bbv12I | GWGCWC | 1 cut(s) | 577 |
| BbvI | GCAGC | 2 cut(s) | 818, 825 |
| BccI | CCATC | 1 cut(s) | 1450 |
| BciT130I | CCWGG | 1 cut(s) | 554 |
| BclI | TGATCA | 1 cut(s) | 1059 |
| BcoDI | GTCTC | 1 cut(s) | 599 |
| BfaI | CTAG | 5 cut(s) | 110, 558, 654, 1004, 1663 |
| BfmI | CTRYAG | 3 cut(s) | 321, 720, 1339 |
| BfoI | RGCGCY | 2 cut(s) | 839, 1162 |
| BfrI | CTTAAG | 1 cut(s) | 77 |
| BglII | AGATCT | 3 cut(s) | 130, 398, 889 |
| BisI | GCNGC | 2 cut(s) | 807, 839 |
| BlsI | GCNGC | 2 cut(s) | 808, 840 |
| Bme1390I | CCNGG | 1 cut(s) | 554 |
| Bme18I | GGWCC | 5 cut(s) | 40, 148, 1425, 1550, 1615 |
| BmeT110I | CYCGRG | 1 cut(s) | 1135 |
| BmgT120I | GGNCC | 5 cut(s) | 40, 148, 1425, 1550, 1615 |
| BmiI | GGNNCC | 5 cut(s) | 42, 149, 1552, 1616, 1617 |
| BmrFI | CCNGG | 1 cut(s) | 554 |
| BmrI | ACTGGG | 1 cut(s) | 1549 |
| BmsI | GCATC | 3 cut(s) | 474, 757, 1262 |
| BmuI | ACTGGG | 1 cut(s) | 1549 |
| BpiI | GAAGAC | 1 cut(s) | 191 |
| BpmI | CTGGAG | 1 cut(s) | 1229 |
| BpuEI | CTTGAG | 1 cut(s) | 1166 |
| BsaJI | CCNNGG | 4 cut(s) | 211, 568, 1134, 1654 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 575, 605 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 82 |
| Bse1I | ACTGG | 3 cut(s) | 1555, 1570, 1589 |
| BseBI | CCWGG | 1 cut(s) | 554 |
| BseDI | CCNNGG | 4 cut(s) | 211, 568, 1134, 1654 |
| BseGI | GGATG | 3 cut(s) | 549, 650, 1216 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 82 |
| BseMII | CTCAG | 1 cut(s) | 48 |
| BseNI | ACTGG | 3 cut(s) | 1555, 1570, 1589 |
| BseRI | GAGGAG | 2 cut(s) | 1410, 1499 |
| BseXI | GCAGC | 2 cut(s) | 818, 825 |
| BsgI | GTGCAG | 1 cut(s) | 1284 |
| BshFI | GGCC | 3 cut(s) | 101, 1035, 1460 |
| BsiHKAI | GWGCWC | 1 cut(s) | 577 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1135 |
| BslFI | GGGAC | 6 cut(s) | 161, 1089, 1152, 1536, 1621, 1628 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 82 |
| BsmAI | GTCTC | 1 cut(s) | 599 |
| BsmFI | GGGAC | 6 cut(s) | 161, 1089, 1152, 1536, 1621, 1628 |
| BsmI | GAATGC | 1 cut(s) | 430 |
| BsnI | GGCC | 3 cut(s) | 101, 1035, 1460 |
| BsoBI | CYCGRG | 1 cut(s) | 1135 |
| Bsp1286I | GDGCHC | 1 cut(s) | 577 |
| Bsp143I | GATC | 8 cut(s) | 130, 398, 889, 901, 931, 965, 1059, 1608 |
| Bsp19I | CCATGG | 1 cut(s) | 1654 |
| BspACI | CCGC | 2 cut(s) | 1359, 1640 |
| BspANI | GGCC | 3 cut(s) | 101, 1035, 1460 |
| BspCNI | CTCAG | 1 cut(s) | 49 |
| BspLI | GGNNCC | 5 cut(s) | 42, 149, 1552, 1616, 1617 |
| BspTI | CTTAAG | 1 cut(s) | 77 |
| BsrI | ACTGG | 3 cut(s) | 1555, 1570, 1589 |
| BssECI | CCNNGG | 4 cut(s) | 211, 568, 1134, 1654 |
| BssMI | GATC | 8 cut(s) | 130, 398, 889, 901, 931, 965, 1059, 1608 |
| BssNAI | GTATAC | 1 cut(s) | 859 |
| BssSI | CACGAG | 1 cut(s) | 453 |
| BssT1I | CCWWGG | 3 cut(s) | 211, 568, 1654 |
| Bst1107I | GTATAC | 1 cut(s) | 859 |
| Bst2BI | CACGAG | 1 cut(s) | 453 |
| Bst2UI | CCWGG | 1 cut(s) | 554 |
| Bst4CI | ACNGT | 4 cut(s) | 322, 668, 824, 1072 |
| Bst6I | CTCTTC | 2 cut(s) | 42, 1466 |
| BstAFI | CTTAAG | 1 cut(s) | 77 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 448, 1499 |
| BstC8I | GCNNGC | 3 cut(s) | 613, 617, 628 |
| BstDEI | CTNAG | 5 cut(s) | 57, 195, 273, 1041, 1365 |
| BstDSI | CCRYGG | 1 cut(s) | 1654 |
| BstF5I | GGATG | 3 cut(s) | 549, 650, 1216 |
| BstH2I | RGCGCY | 2 cut(s) | 839, 1162 |
| BstHHI | GCGC | 2 cut(s) | 838, 1161 |
| BstKTI | GATC | 8 cut(s) | 133, 401, 892, 904, 934, 968, 1062, 1611 |
| BstMAI | GTCTC | 1 cut(s) | 599 |
| BstMBI | GATC | 8 cut(s) | 130, 398, 889, 901, 931, 965, 1059, 1608 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 448, 1499 |
| BstNI | CCWGG | 1 cut(s) | 554 |
| BstNSI | RCATGY | 1 cut(s) | 787 |
| BstSCI | CCNGG | 1 cut(s) | 552 |
| BstSFI | CTRYAG | 3 cut(s) | 321, 720, 1339 |
| BstV1I | GCAGC | 2 cut(s) | 818, 825 |
| BstV2I | GAAGAC | 1 cut(s) | 191 |
| BstX2I | RGATCY | 3 cut(s) | 130, 398, 889 |
| BstYI | RGATCY | 3 cut(s) | 130, 398, 889 |
| BstZ17I | GTATAC | 1 cut(s) | 859 |
| BsuRI | GGCC | 3 cut(s) | 101, 1035, 1460 |
| BtgI | CCRYGG | 1 cut(s) | 1654 |
| BtsCI | GGATG | 3 cut(s) | 549, 650, 1216 |
| BtsIMutI | CAGTG | 1 cut(s) | 318 |
| Cac8I | GCNNGC | 3 cut(s) | 613, 617, 628 |
| CfoI | GCGC | 2 cut(s) | 838, 1161 |
| Cfr13I | GGNCC | 5 cut(s) | 40, 148, 1425, 1550, 1615 |
| Csp6I | GTAC | 3 cut(s) | 583, 1331, 1622 |
| CviAII | CATG | 4 cut(s) | 563, 784, 1063, 1655 |
| CviQI | GTAC | 3 cut(s) | 583, 1331, 1622 |
| DdeI | CTNAG | 5 cut(s) | 57, 195, 273, 1041, 1365 |
| DpnI | GATC | 8 cut(s) | 132, 400, 891, 903, 933, 967, 1061, 1610 |
| DpnII | GATC | 8 cut(s) | 130, 398, 889, 901, 931, 965, 1059, 1608 |
| EaeI | YGGCCR | 1 cut(s) | 1458 |
| Eam1104I | CTCTTC | 2 cut(s) | 42, 1466 |
| EarI | CTCTTC | 2 cut(s) | 42, 1466 |
| Ecl136II | GAGCTC | 1 cut(s) | 575 |
| Eco130I | CCWWGG | 3 cut(s) | 211, 568, 1654 |
| Eco147I | AGGCCT | 1 cut(s) | 1035 |
| Eco24I | GRGCYC | 1 cut(s) | 577 |
| Eco47I | GGWCC | 5 cut(s) | 40, 148, 1425, 1550, 1615 |
| Eco47III | AGCGCT | 1 cut(s) | 1160 |
| Eco53kI | GAGCTC | 1 cut(s) | 575 |
| Eco57I | CTGAAG | 1 cut(s) | 66 |
| Eco88I | CYCGRG | 1 cut(s) | 1135 |
| EcoICRI | GAGCTC | 1 cut(s) | 575 |
| EcoO109I | RGGNCCY | 4 cut(s) | 40, 148, 1550, 1615 |
| EcoRII | CCWGG | 1 cut(s) | 552 |
| EcoT14I | CCWWGG | 3 cut(s) | 211, 568, 1654 |
| EcoT38I | GRGCYC | 1 cut(s) | 577 |
| ErhI | CCWWGG | 3 cut(s) | 211, 568, 1654 |
| FaeI | CATG | 4 cut(s) | 566, 787, 1066, 1658 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 728, 760 |
| FaqI | GGGAC | 6 cut(s) | 161, 1089, 1152, 1536, 1621, 1628 |
| FatI | CATG | 4 cut(s) | 562, 783, 1062, 1654 |
| FauI | CCCGC | 1 cut(s) | 1647 |
| FauNDI | CATATG | 1 cut(s) | 515 |
| FbaI | TGATCA | 1 cut(s) | 1059 |
| FblI | GTMKAC | 1 cut(s) | 858 |
| Fnu4HI | GCNGC | 2 cut(s) | 807, 839 |
| FokI | GGATG | 3 cut(s) | 536, 657, 1223 |
| FriOI | GRGCYC | 1 cut(s) | 577 |
| Fsp4HI | GCNGC | 2 cut(s) | 807, 839 |
| FspBI | CTAG | 5 cut(s) | 110, 558, 654, 1004, 1663 |
| GlaI | GCGC | 2 cut(s) | 837, 1160 |
| GluI | GCNGC | 2 cut(s) | 807, 839 |
| GsuI | CTGGAG | 1 cut(s) | 1229 |
| HaeII | RGCGCY | 2 cut(s) | 839, 1162 |
| HaeIII | GGCC | 3 cut(s) | 101, 1035, 1460 |
| HhaI | GCGC | 2 cut(s) | 838, 1161 |
| Hin1II | CATG | 4 cut(s) | 566, 787, 1066, 1658 |
| Hin6I | GCGC | 2 cut(s) | 836, 1159 |
| HinP1I | GCGC | 2 cut(s) | 836, 1159 |
| HincII | GTYRAC | 3 cut(s) | 328, 795, 957 |
| HindII | GTYRAC | 3 cut(s) | 328, 795, 957 |
| HindIII | AAGCTT | 1 cut(s) | 1367 |
| HinfI | GANTC | 5 cut(s) | 496, 725, 791, 880, 1083 |
| HphI | GGTGA | 2 cut(s) | 239, 1394 |
| Hpy166II | GTNNAC | 6 cut(s) | 328, 650, 795, 859, 913, 957 |
| Hpy188I | TCNGA | 3 cut(s) | 689, 970, 1608 |
| Hpy188III | TCNNGA | 8 cut(s) | 263, 396, 764, 817, 1004, 1137, 1183, 1283 |
| Hpy8I | GTNNAC | 6 cut(s) | 328, 650, 795, 859, 913, 957 |
| Hpy99I | CGWCG | 1 cut(s) | 1524 |
| HpyAV | CCTTC | 9 cut(s) | 91, 249, 292, 382, 782, 1045, 1280, 1436, 1635 |
| HpyCH4III | ACNGT | 4 cut(s) | 322, 668, 824, 1072 |
| HpyCH4IV | ACGT | 2 cut(s) | 683, 1513 |
| HpyCH4V | TGCA | 6 cut(s) | 307, 442, 806, 949, 1265, 1493 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 448, 1499 |
| HpyF3I | CTNAG | 5 cut(s) | 57, 195, 273, 1041, 1365 |
| HpySE526I | ACGT | 2 cut(s) | 683, 1513 |
| Hsp92II | CATG | 4 cut(s) | 566, 787, 1066, 1658 |
| HspAI | GCGC | 2 cut(s) | 836, 1159 |
| KflI | GGGWCCC | 1 cut(s) | 1615 |
| Ksp22I | TGATCA | 1 cut(s) | 1059 |
| Kzo9I | GATC | 8 cut(s) | 130, 398, 889, 901, 931, 965, 1059, 1608 |
| LmnI | GCTCC | 1 cut(s) | 572 |
| Lsp1109I | GCAGC | 2 cut(s) | 818, 825 |
| LweI | GCATC | 3 cut(s) | 474, 757, 1262 |
| MaeI | CTAG | 5 cut(s) | 110, 558, 654, 1004, 1663 |
| MaeII | ACGT | 2 cut(s) | 683, 1513 |
| MaeIII | GTNAC | 7 cut(s) | 22, 479, 668, 694, 924, 1145, 1235 |
| MalI | GATC | 8 cut(s) | 132, 400, 891, 903, 933, 967, 1061, 1610 |
| MboI | GATC | 8 cut(s) | 130, 398, 889, 901, 931, 965, 1059, 1608 |
| MboII | GAAGA | 9 cut(s) | 59, 196, 335, 358, 452, 1100, 1121, 1157, 1483 |
| MflI | RGATCY | 3 cut(s) | 130, 398, 889 |
| MhlI | GDGCHC | 1 cut(s) | 577 |
| MlsI | TGGCCA | 1 cut(s) | 1460 |
| MluNI | TGGCCA | 1 cut(s) | 1460 |
| MlyI | GAGTC | 2 cut(s) | 490, 800 |
| MmeI | TCCRAC | 2 cut(s) | 63, 1461 |
| Mox20I | TGGCCA | 1 cut(s) | 1460 |
| MroXI | GAANNNNTTC | 1 cut(s) | 824 |
| MscI | TGGCCA | 1 cut(s) | 1460 |
| MseI | TTAA | 8 cut(s) | 78, 116, 125, 522, 663, 938, 978, 1527 |
| Msp20I | TGGCCA | 1 cut(s) | 1460 |
| MspCI | CTTAAG | 1 cut(s) | 77 |
| MspR9I | CCNGG | 1 cut(s) | 554 |
| Mva1269I | GAATGC | 1 cut(s) | 430 |
| MvaI | CCWGG | 1 cut(s) | 554 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 448, 1499 |
| NcoI | CCATGG | 1 cut(s) | 1654 |
| NdeI | CATATG | 1 cut(s) | 515 |
| NdeII | GATC | 8 cut(s) | 130, 398, 889, 901, 931, 965, 1059, 1608 |
| NlaIII | CATG | 4 cut(s) | 566, 787, 1066, 1658 |
| NlaIV | GGNNCC | 5 cut(s) | 42, 149, 1552, 1616, 1617 |
| NmeAIII | GCCGAG | 1 cut(s) | 1275 |
| NmuCI | GTSAC | 2 cut(s) | 694, 1235 |
| NspI | RCATGY | 1 cut(s) | 787 |
| PceI | AGGCCT | 1 cut(s) | 1035 |
| PctI | GAATGC | 1 cut(s) | 430 |
| PdmI | GAANNNNTTC | 1 cut(s) | 824 |
| PfeI | GAWTC | 3 cut(s) | 725, 880, 1083 |
| PkrI | GCNGC | 2 cut(s) | 808, 840 |
| PleI | GAGTC | 2 cut(s) | 490, 799 |
| PpsI | GAGTC | 2 cut(s) | 490, 799 |
| PpuMI | RGGWCCY | 4 cut(s) | 40, 148, 1550, 1615 |
| PshBI | ATTAAT | 1 cut(s) | 1527 |
| Psp124BI | GAGCTC | 1 cut(s) | 577 |
| Psp5II | RGGWCCY | 4 cut(s) | 40, 148, 1550, 1615 |
| Psp6I | CCWGG | 1 cut(s) | 552 |
| PspGI | CCWGG | 1 cut(s) | 552 |
| PspN4I | GGNNCC | 5 cut(s) | 42, 149, 1552, 1616, 1617 |
| PspPI | GGNCC | 5 cut(s) | 40, 148, 1425, 1550, 1615 |
| PspPPI | RGGWCCY | 4 cut(s) | 40, 148, 1550, 1615 |
| PsrI | GAACNNNNNNTAC | 4 cut(s) | 1345, 1377, 1587, 1619 |
| PsuI | RGATCY | 3 cut(s) | 130, 398, 889 |
| RsaI | GTAC | 3 cut(s) | 584, 1332, 1623 |
| RsaNI | GTAC | 3 cut(s) | 583, 1331, 1622 |
| SacI | GAGCTC | 1 cut(s) | 577 |
| SaqAI | TTAA | 8 cut(s) | 78, 116, 125, 522, 663, 938, 978, 1527 |
| SatI | GCNGC | 2 cut(s) | 807, 839 |
| Sau3AI | GATC | 8 cut(s) | 130, 398, 889, 901, 931, 965, 1059, 1608 |
| Sau96I | GGNCC | 5 cut(s) | 40, 148, 1425, 1550, 1615 |
| SchI | GAGTC | 2 cut(s) | 490, 800 |
| ScrFI | CCNGG | 1 cut(s) | 554 |
| SduI | GDGCHC | 1 cut(s) | 577 |
| SfaNI | GCATC | 3 cut(s) | 474, 757, 1262 |
| SfcI | CTRYAG | 3 cut(s) | 321, 720, 1339 |
| SinI | GGWCC | 5 cut(s) | 40, 148, 1425, 1550, 1615 |
| SmlI | CTYRAG | 2 cut(s) | 77, 1181 |
| SmoI | CTYRAG | 2 cut(s) | 77, 1181 |
| SseBI | AGGCCT | 1 cut(s) | 1035 |
| SsiI | CCGC | 2 cut(s) | 1359, 1640 |
| SspMI | CTAG | 5 cut(s) | 110, 558, 654, 1004, 1663 |
| SstI | GAGCTC | 1 cut(s) | 577 |
| StuI | AGGCCT | 1 cut(s) | 1035 |
| StyD4I | CCNGG | 1 cut(s) | 552 |
| StyI | CCWWGG | 3 cut(s) | 211, 568, 1654 |
| TaaI | ACNGT | 4 cut(s) | 322, 668, 824, 1072 |
| TaiI | ACGT | 2 cut(s) | 686, 1516 |
| TaqI | TCGA | 4 cut(s) | 176, 395, 1086, 1282 |
| TfiI | GAWTC | 3 cut(s) | 725, 880, 1083 |
| Tru1I | TTAA | 8 cut(s) | 78, 116, 125, 522, 663, 938, 978, 1527 |
| Tru9I | TTAA | 8 cut(s) | 78, 116, 125, 522, 663, 938, 978, 1527 |
| TscAI | CASTG | 1 cut(s) | 325 |
| TseFI | GTSAC | 2 cut(s) | 694, 1235 |
| TseI | GCWGC | 2 cut(s) | 806, 838 |
| Tsp45I | GTSAC | 2 cut(s) | 694, 1235 |
| TspDTI | ATGAA | 4 cut(s) | 358, 401, 1128, 1227 |
| TspGWI | ACGGA | 2 cut(s) | 1093, 1223 |
| TspRI | CASTG | 1 cut(s) | 325 |
| Vha464I | CTTAAG | 1 cut(s) | 77 |
| VpaK11BI | GGWCC | 5 cut(s) | 40, 148, 1425, 1550, 1615 |
| VspI | ATTAAT | 1 cut(s) | 1527 |
| XapI | RAATTY | 3 cut(s) | 416, 812, 844 |
| XbaI | TCTAGA | 1 cut(s) | 1003 |
| XceI | RCATGY | 1 cut(s) | 787 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 638, 1562 |
| XmiI | GTMKAC | 1 cut(s) | 858 |
| XmnI | GAANNNNTTC | 1 cut(s) | 824 |
| XspI | CTAG | 5 cut(s) | 110, 558, 654, 1004, 1663 |