RLG00000009187

Cyclic nucleotide-gated ion channel 1-like

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
Physical Location & Seq
Reverse (-)
48522123 .. 48532863
10741 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000009187

Sequence Viewer

Length: 1917 bp
ATGAGCAACCAAGTCAACAACGTATCAATTGACTTGCGAAATTTAGATGGAGTCAATTTATTGGGGGAGTCTGACAAAGAAAATGGAGGGCAAAGAAGCACCAGTGCAGAAGGGCCAGCAGTACAGGAAATTATCAAAGCACGAGCTAAGGGAATGCACAGGTGGAATAAATTCTTCATTATTCTGTGTTCATCTGCAGTCTTCGTTGATCCTTTGTTCTGCTATATCAATGTCATTGACCAAGACAATATGTGCTTCAATAACGACTGGAATTTGCTGCTCATATATGTTTGTTTGCGAATGGTCGTTGATGTATTTTATGCTGTTGACATAATCATTTTCTTGTGCGGAGTTTTTAAGAAACGTAAGGTTTGGGCATGCTGGAAGTCAAGAAATGATCAAAAGACAGTAGTTCCTTGGAAACAAGCAATCAAAAGATACTCTGTTTTGTTATCAATTCTACCTGGTGCATTGGTTGCCTTTCCCATTCTAGAGGTACTACTTTTACTCTCTTTATTCGGGACATACTGGGATACTTTTTATGTTATTTTCATTGTCGTGCCCATTCAATACGTGCTACGGATCTTTCTTATCTATGGATCACAAAGGTGGCGTCTTATGAAAAAGACTGCAGCAGGAAGATGGCTGAAACCTTTGTTAGATTTTCTGCCTTTCGTCCTTGCTTCTCATCTATTTGGAGCCTTGTGGTATCGTTTTGCTGTACAAAGACAAATAGCTTGTTGGAAGACAAATTCTAAAATTATTCTAAGAACTACAAAGGAAAATTGGAATGAATTTGAATGTAAGGCTAGATGGTCATTCAACAGCTCGCTATTGCAAGAATTGTGCCCTACAAAAGATGAAAATTCAAAAGCCTTTGACTTTGGTATATATTTTTATGCTCTTCATTCTAATGTGACAAATTCATCAAATCTTTCACGAAGAATGTCACTATCTTTTTGGTGGGCGCTTCGAAATTTAAGTTCTTTTGGTTCGAACCTGGTTACCAGCATGCAAATCTGGGAGATCATCTTTTCGATGGCGATATCTATATGTGGCATGGTGCTATTTTTAGTATATCTTAACGCAAGAGTGCAGGAATCACAAGAACGATCAAATCAGCTTAAATTGAAGGAAAAGAAGCATTTGATGAAACCAGATATAGATTTGTGGTTATCTAAAAATGATCTCTCAAAGTTGAAGACAGTGACAAAGAGCTCTATGGATTTGCAGACAACGAACCTAAGGGAAAAAGCTCTGAAGACGGTGATTCTTGAAAACATACACAAACTTGAAGAAAACAAAGATATTGATGTGCAGAATATCATTTCTATTCTTCCCATAAAGTACAAAAAAAGCGTCATGCGCCTTCTTTGTTTGGCTTCACTAAAGAAAGTGCCAATGCTTGAGAATTTGAATGAGAAAATGTTGAAAGTGATTTGTGAGCATCTAAAGCCTGTCATTTACATAGAAGACAACTACATTATTGAAGAGGGGAAACCACTTGGAATGACACTCTTCATCACGCAAGGCATCGCATGGACATATGCAGTTAGTAATAACGTTGGTGCAGAAACAAGCTGTGGTTCTTCAAGCAATAAATGGTTAAAGCGAGGTGATTATTATGGAGAAGAGCTTTTGCAGTGGGCATTCAAATGTCCCTCTTATTCTGACTTACCCATCTCAACTAGAACTGTTATGTCCCAAGAAAAGGTCGAGGCATTTGCTCTTAGGGCTAGCGACCTAAAAAGCATTGTGTCAAAGTATTGGTGGCATTTTACTACGGAGGTACCTCAAGTAGAGCTCGAGCAATGGGAGAATTTAGCGGCTTCTTCGATACAAGCAGCCTGGCGCAGCCATCTGGCAAGAGCTAGGCACTCAAATGGATGGGACAAATTTACAGTACAGTGCTACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

639

Amino Acids

73.89

Weight (kDa)

9.21

Isoelectric Point (pI)

44.75

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000017)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07351 FvH4_1g11800 FvH4_1g11800 FvH4_1g11800 FvH4_1g11800 FvH4_1g11800 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_4g14360 FvH4_6g13561 FvH4_6g13562 FvH4_6g13580 FvH4_6g13590 FvH4_6g13590 FvH4_6g13590 FvH4_6g13731 FvH4_6g13770 FvH4_6g13800 FvH4_6g13800 FvH4_6g13860 FvH4_6g13870 FvH4_6g13870 FvH4_6g13870 FvH4_6g13870 FvH4_6g13870 FvH4_6g13890 FvH4_6g33801 FvH4_7g13020 FvH4_7g13270 FvH4_7g13270 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g14580 FvH4_7g14580 FvH4_7g14580 FvH4_7g14600 FvH4_7g14600 FvH4_7g20030 FvH4_7g20510 FvH4_7g20510 FvH4_7g20510 FvH4_7g20670 FvH4_7g20670 FvH4_7g20670 FvH4_7g20670 FvH4_7g20690 FvH4_7g20690 FvH4_7g31930 FvH4_7g31930 FvH4_7g31940 FvH4_7g31940
malus_domestica MD01G1115700.v1.1 MD01G1115800.v1.1 MD01G1116600.v1.1 MD01G1116700.v1.1 MD01G1117000.v1.1 MD01G1225000.v1.1 MD02G1077900.v1.1 MD02G1078000.v1.1 MD02G1078200.v1.1 MD02G1078400.v1.1 MD02G1084300.v1.1 MD04G1004700.v1.1 MD04G1123100.v1.1 MD04G1123200.v1.1 MD04G1128000.v1.1 MD04G1128400.v1.1 MD05G1299700.v1.1 MD05G1300000.v1.1 MD07G1184000.v1.1 MD07G1292300.v1.1 MD08G1214800.v1.1
prunus_persica Prupe.1G205100_v2.0.a1 Prupe.1G205100_v2.0.a1 Prupe.1G205200_v2.0.a1 Prupe.2G222300_v2.0.a1 Prupe.2G223300_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223600_v2.0.a1 Prupe.2G223600_v2.0.a1 Prupe.2G223600_v2.0.a1 Prupe.2G223700_v2.0.a1 Prupe.2G223700_v2.0.a1 Prupe.2G223700_v2.0.a1 Prupe.2G223700_v2.0.a1 Prupe.2G223800_v2.0.a1 Prupe.2G223900_v2.0.a1 Prupe.2G224000_v2.0.a1 Prupe.5G162000_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G291000_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G210400_v2.0.a1 Prupe.7G210600_v2.0.a1 Prupe.7G210700_v2.0.a1 Prupe.7G210800_v2.0.a1 Prupe.7G210900_v2.0.a1 Prupe.8G097600_v2.0.a1 Prupe.8G097800_v2.0.a1 Prupe.8G097800_v2.0.a1
pyrus_communis pycom01g14430 pycom01g14440 pycom01g23130 pycom01g23160 pycom01g23330 pycom02g06210 pycom02g06220 pycom02g06250 pycom02g06270 pycom02g06710 pycom03g05360 pycom03g05380 pycom04g11470 pycom04g11480 pycom04g11520 pycom04g11560 pycom04g11600 pycom04g11610 pycom04g11650 pycom04g11660 pycom04g11670 pycom05g27790 pycom07g17630 pycom08g20960 pycom126g00020 pycom126g00030
rosa_chinensis RchiOBHm_Chr1g0318251 RchiOBHm_Chr1g0318731 RchiOBHm_Chr1g0339101 RchiOBHm_Chr1g0339111 RchiOBHm_Chr1g0347151 RchiOBHm_Chr1g0347161 RchiOBHm_Chr1g0347221 RchiOBHm_Chr1g0352401 RchiOBHm_Chr1g0352441 RchiOBHm_Chr1g0352461 RchiOBHm_Chr1g0356131 RchiOBHm_Chr1g0363991 RchiOBHm_Chr1g0364791 RchiOBHm_Chr1g0364801 RchiOBHm_Chr1g0364811 RchiOBHm_Chr1g0364851 RchiOBHm_Chr1g0364951 RchiOBHm_Chr1g0370821 RchiOBHm_Chr1g0381221 RchiOBHm_Chr1g0381231 RchiOBHm_Chr1g0381261 RchiOBHm_Chr1g0381271 RchiOBHm_Chr1g0381341 RchiOBHm_Chr1g0381351 RchiOBHm_Chr1g0381391 RchiOBHm_Chr1g0381801 RchiOBHm_Chr1g0381821 RchiOBHm_Chr2g0093241 RchiOBHm_Chr2g0116391 RchiOBHm_Chr3g0466441 RchiOBHm_Chr3g0466631 RchiOBHm_Chr3g0466651 RchiOBHm_Chr3g0496921 RchiOBHm_Chr4g0400441 RchiOBHm_Chr4g0400501 RchiOBHm_Chr4g0400511 RchiOBHm_Chr4g0400691 RchiOBHm_Chr4g0400701 RchiOBHm_Chr4g0404331 RchiOBHm_Chr5g0052101 RchiOBHm_Chr5g0052111 RchiOBHm_Chr5g0052171 RchiOBHm_Chr5g0052181 RchiOBHm_Chr6g0264161 RchiOBHm_Chr6g0265551 RchiOBHm_Chr7g0213571 RchiOBHm_Chr7g0213581
rosa_laevigata RLG00000002796 RLG00000003261 RLG00000007935 RLG00000007936 RLG00000009187 RLG00000014179 RLG00000016381 RLG00000018265 RLG00000024558 RLG00000024574 RLG00000026232 RLG00000026234 RLG00000026236 RLG00000026237 RLG00000027459 RLG00000027461 RLG00000027463 RLG00000027530 RLG00000028103 RLG00000028304 RLG00000028333 RLG00000029214 RLG00000029848 RLG00000029951 RLG00000030115 RLG00000030552 RLG00000033668 RLG00000034840 RLG00000034841 RLG00000034842 RLG00000035830
rosa_multiflora Rmu_sc0000654.1_g000004 Rmu_sc0000675.1_g000025 Rmu_sc0001075.1_g000002 Rmu_sc0001726.1_g000004 Rmu_sc0001772.1_g000061 Rmu_sc0001772.1_g000065 Rmu_sc0002067.1_g000002 Rmu_sc0002183.1_g000001 Rmu_sc0002183.1_g000006 Rmu_sc0002244.1_g000003 Rmu_sc0002313.1_g000004 Rmu_sc0002319.1_g000004 Rmu_sc0002539.1_g000085 Rmu_sc0002636.1_g000004 Rmu_sc0003229.1_g000007 Rmu_sc0003313.1_g000020 Rmu_sc0003546.1_g000007 Rmu_sc0003724.1_g000015 Rmu_sc0003936.1_g000029 Rmu_sc0004191.1_g000067 Rmu_sc0004525.1_g000012 Rmu_sc0005122.1_g000009 Rmu_sc0005255.1_g000040 Rmu_sc0005338.1_g000016 Rmu_sc0005584.1_g000008 Rmu_sc0006460.1_g000013 Rmu_sc0006872.1_g000011 Rmu_sc0006872.1_g000015 Rmu_sc0006872.1_g000016 Rmu_sc0006952.1_g000013 Rmu_sc0007342.1_g000005 Rmu_sc0007342.1_g000006 Rmu_sc0008418.1_g000003 Rmu_sc0008418.1_g000006 Rmu_sc0008636.1_g000007 Rmu_sc0008636.1_g000008 Rmu_sc0009205.1_g000014 Rmu_sc0009365.1_g000014 Rmu_sc0009917.1_g000002 Rmu_sc0019289.1_g000003 Rmu_ssc0000098.1_g000011 Rmu_ssc0000098.1_g000012 Rmu_ssc0000167.1_g000018 Rmu_ssc0000167.1_g000024 Rmu_ssc0000326.1_g000015
rosa_roxburghii Rroxscaffold_166G00440780 Rroxscaffold_176G00431500 Rroxscaffold_1G00015080 Rroxscaffold_1G00027880 Rroxscaffold_1G00027890 Rroxscaffold_1G00027920 Rroxscaffold_2G00127250 Rroxscaffold_2G00148380 Rroxscaffold_3G00219450 Rroxscaffold_3G00232170 Rroxscaffold_3G00232210 Rroxscaffold_3G00242230 Rroxscaffold_3G00242240 Rroxscaffold_3G00244790 Rroxscaffold_3G00245790 Rroxscaffold_4G00278400 Rroxscaffold_4G00278430 Rroxscaffold_4G00278670 Rroxscaffold_4G00278680 Rroxscaffold_4G00278690 Rroxscaffold_4G00278700 Rroxscaffold_4G00278720 Rroxscaffold_4G00291690 Rroxscaffold_4G00292070 Rroxscaffold_4G00292090 Rroxscaffold_4G00292770 Rroxscaffold_4G00302240 Rroxscaffold_4G00302860 Rroxscaffold_4G00311320 Rroxscaffold_4G00311330 Rroxscaffold_4G00320570 Rroxscaffold_4G00322050 Rroxscaffold_4G00329480 Rroxscaffold_4G00329730 Rroxscaffold_5G00345500 Rroxscaffold_5G00345510 Rroxscaffold_5G00360830 Rroxscaffold_5G00360840 Rroxscaffold_6G00393450 Rroxscaffold_6G00404030 Rroxscaffold_6G00414220 Rroxscaffold_6G00414230 Rroxscaffold_6G00414280 Rroxscaffold_6G00414290 Rroxscaffold_6G00414350 Rroxscaffold_6G00414470 Rroxscaffold_7G00202570 Rroxscaffold_7G00203460 Rroxscaffold_7G00203470
rosa_rugosa Rorug01G0020500 Rorug01G0020600 Rorug01G0020700 Rorug01G0143700.1 Rorug01G0225700 Rorug01G0228500 Rorug01G0228600 Rorug01G0228600 Rorug01G0228700 Rorug01G0228800 Rorug01G0228800 Rorug01G0229000 Rorug01G0229300 Rorug01G0229400 Rorug01G0229600 Rorug01G0229700 Rorug01G0232200 Rorug01G0232600 Rorug01G0232600 Rorug01G0311900 Rorug01G0311900 Rorug01G0318400 Rorug01G0318500 Rorug01G0318500 Rorug01G0318500 Rorug01G0427900 Rorug01G0427900 Rorug01G0428000 Rorug01G0428200 Rorug01G0428300 Rorug01G0428400 Rorug01G0431500 Rorug01G0431600 Rorug01G0431600 Rorug02G0033800 Rorug02G0206300 Rorug03G0081900 Rorug03G0083200 Rorug03G0083200 Rorug03G0083300 Rorug04G0025100 Rorug04G0025100 Rorug04G0025200 Rorug04G0025300 Rorug04G0058600 Rorug04G0058700 Rorug04G0058800 Rorug04G0098400 Rorug04G0098500 Rorug05G0274500 Rorug05G0274600 Rorug05G0274800 Rorug06G0008500 Rorug06G0009100 Rorug06G0018000
rosa_samantha Rh1AG031700 Rh1AG036100 Rh1AG089800 Rh1AG239800 Rh1AG239900 Rh1AG242000 Rh1AG242300 Rh1AG245600 Rh1AG262600 Rh1AG319700 Rh1AG319800 Rh1AG319900 Rh1AG327200 Rh1AG451100 Rh1AG451200 Rh1AG451300 Rh1AG451600 Rh1AG451700 Rh1BG027200 Rh1BG071600 Rh1BG090700 Rh1BG211000 Rh1BG213000 Rh1BG213500 Rh1BG282800 Rh1BG288400 Rh1BG408100 Rh1BG408200 Rh1BG408400 Rh1BG408700 Rh1CG026300 Rh1CG028300 Rh1CG224100 Rh1CG226000 Rh1CG226100 Rh1CG229300 Rh1CG229400 Rh1CG245900 Rh1CG299200 Rh1CG299400 Rh1CG299500 Rh1CG303300 Rh1CG305100 Rh1CG422500 Rh1CG422600 Rh1CG422700 Rh1CG422800 Rh1CG422900 Rh1CG423100 Rh1CG423300 Rh1CG423400 Rh1CG426300 Rh1CG426600 Rh1DG239300 Rh1DG239600 Rh1DG258300 Rh1DG314200 Rh1DG314300 Rh1DG314400 Rh1DG320000 Rh1DG439200 Rh1DG439400 Rh1DG439500 Rh1DG439700 Rh1DG440000 Rh1DG443800 Rh2AG261800 Rh2BG080900 Rh2CG083300 Rh2DG078900 Rh2DG270000 Rh2DG270100 Rh3AG128400 Rh3AG130100 Rh3AG130500 Rh3AG332500 Rh3AG332600 Rh3AG332800 Rh3BG149700 Rh3BG151500 Rh3CG151400 Rh3CG354500 Rh3CG366800 Rh3DG150500 Rh3DG152200 Rh4AG101400 Rh4AG102900 Rh4AG148300 Rh4AG148600 Rh4BG098000 Rh4CG111100 Rh4CG111300 Rh4CG155100 Rh4DG094800 Rh5AG213600 Rh5AG346900 Rh5AG347000 Rh5BG357500 Rh5BG357700 Rh5BG485400 Rh5CG383100 Rh5CG383200 Rh5CG383300 Rh5CG509900 Rh5DG373000 Rh5DG373200 Rh6BG054300 Rh6BG126300 Rh6CG125100 Rh6CG185300 Rh6DG177000 Rh7AG276100 Rh7AG276200 Rh7BG230500 Rh7BG270500 Rh7BG364000 Rh7CG250100 Rh7CG295200 Rh7CG295300 Rh7DG389700
rosa_wichuraiana Rw0G001190 Rw0G010680 Rw0G013360 Rw0G014310 Rw0G014890 Rw0G020310 Rw0G021350 Rw0G022510 Rw1G003360 Rw1G004330 Rw1G006930 Rw1G008310 Rw1G021090 Rw1G021150 Rw1G021210 Rw1G023200 Rw1G023210 Rw1G028340 Rw1G028350 Rw1G028990 Rw1G032510 Rw1G039370 Rw1G039400 Rw1G039410 Rw1G039420 Rw1G039430 Rw2G006700 Rw2G020550 Rw2G020580 Rw3G012130 Rw3G012300 Rw3G012310 Rw3G028220 Rw3G029230 Rw5G021600 Rw5G032790 Rw6G011240 Rw7G027670 Rw7G032780

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1789
AccB1I GGYRCC 1 cut(s) 1789
AciI CCGC 2 cut(s) 348, 1826
AclI AACGTT 1 cut(s) 1563
AclWI GGATC 3 cut(s) 203, 590, 607
AcuI CTGAAG 1 cut(s) 1280
AcyI GRCGYC 1 cut(s) 613
AfaI GTAC 6 cut(s) 123, 498, 723, 1349, 1791, 1905
AfiI CCNNNNNNNGG 1 cut(s) 1711
AjnI CCWGG 3 cut(s) 463, 999, 1847
AleI CACNNNNGTG 1 cut(s) 607
Alw21I GWGCWC 2 cut(s) 1220, 1806
AlwI GGATC 3 cut(s) 203, 590, 607
Ama87I CYCGRG 1 cut(s) 1805
AoxI GGCC 1 cut(s) 113
ApeKI GCWGC 4 cut(s) 277, 632, 1844, 1854
ArsI GACNNNNNNTTYG 4 cut(s) 598, 630, 1344, 1376
Asp700I GAANNNNTTC 1 cut(s) 170
Asp718I GGTACC 1 cut(s) 1789
AspLEI GCGC 3 cut(s) 970, 1368, 1854
AspS9I GGNCC 1 cut(s) 113
AsuHPI GGTGA 2 cut(s) 1279, 1628
AsuII TTCGAA 2 cut(s) 973, 995
AsuNHI GCTAGC 1 cut(s) 1736
AvaI CYCGRG 1 cut(s) 1805
AxyI CCTNAGG 1 cut(s) 1244
BaeGI GKGCMC 2 cut(s) 564, 851
BaeI ACNNNNGTAYC 2 cut(s) 1773, 1806
BanI GGYRCC 1 cut(s) 1789
BanII GRGCYC 2 cut(s) 1220, 1806
BauI CACGAG 1 cut(s) 141
BbsI GAAGAC 5 cut(s) 193, 752, 1208, 1268, 1479
Bbv12I GWGCWC 2 cut(s) 1220, 1806
BbvI GCAGC 4 cut(s) 264, 644, 1856, 1866
BccI CCATC 7 cut(s) 41, 636, 807, 1033, 1688, 1866, 1881
BcgI CGANNNNNNTGC 2 cut(s) 1706, 1740
BciT130I CCWGG 3 cut(s) 465, 1001, 1849
BciVI GTATCC 1 cut(s) 526
BclI TGATCA 1 cut(s) 397
BfaI CTAG 5 cut(s) 491, 810, 1689, 1737, 1872
BfmI CTRYAG 2 cut(s) 195, 630
BfoI RGCGCY 1 cut(s) 971
BfuI GTATCC 1 cut(s) 526
BisI GCNGC 5 cut(s) 278, 633, 1827, 1845, 1855
BlsI GCNGC 5 cut(s) 279, 634, 1828, 1846, 1856
Bme1390I CCNGG 3 cut(s) 465, 1001, 1849
BmeT110I CYCGRG 1 cut(s) 1805
BmgT120I GGNCC 1 cut(s) 113
BmiI GGNNCC 2 cut(s) 700, 1791
BmrFI CCNGG 3 cut(s) 465, 1001, 1849
BmrI ACTGGG 1 cut(s) 538
BmsI GCATC 2 cut(s) 1456, 1542
BmtI GCTAGC 1 cut(s) 1740
BmuI ACTGGG 1 cut(s) 538
BpiI GAAGAC 5 cut(s) 193, 752, 1208, 1268, 1479
Bpu10I CCTNAGC 1 cut(s) 147
Bpu14I TTCGAA 2 cut(s) 973, 995
BpuEI CTTGAG 2 cut(s) 1427, 1779
BsaAI YACGTR 1 cut(s) 574
BsaHI GRCGYC 1 cut(s) 613
BsaJI CCNNGG 1 cut(s) 416
Bsc4I CCNNNNNNNGG 1 cut(s) 1711
Bse1I ACTGG 3 cut(s) 102, 272, 533
Bse21I CCTNAGG 1 cut(s) 1244
Bse3DI GCAATG 1 cut(s) 1817
BseBI CCWGG 3 cut(s) 465, 1001, 1849
BseDI CCNNGG 1 cut(s) 416
BseGI GGATG 1 cut(s) 1892
BseLI CCNNNNNNNGG 1 cut(s) 1711
BseMI GCAATG 1 cut(s) 1817
BseNI ACTGG 3 cut(s) 102, 272, 533
BseSI GKGCMC 2 cut(s) 564, 851
BseXI GCAGC 4 cut(s) 264, 644, 1856, 1866
BsgI GTGCAG 4 cut(s) 126, 1115, 1337, 1590
BshFI GGCC 1 cut(s) 115
BshNI GGYRCC 1 cut(s) 1789
BsiHKAI GWGCWC 2 cut(s) 1220, 1806
BsiHKCI CYCGRG 1 cut(s) 1805
BslFI GGGAC 4 cut(s) 535, 1644, 1687, 1904
BslI CCNNNNNNNGG 1 cut(s) 1711
BsmFI GGGAC 4 cut(s) 535, 1644, 1687, 1904
BsmI GAATGC 2 cut(s) 159, 1649
BsnI GGCC 1 cut(s) 115
BsoBI CYCGRG 1 cut(s) 1805
Bsp119I TTCGAA 2 cut(s) 973, 995
Bsp1286I GDGCHC 4 cut(s) 564, 851, 1220, 1806
Bsp1407I TGTACA 1 cut(s) 721
Bsp143I GATC 7 cut(s) 208, 397, 582, 599, 1026, 1112, 1186
BspACI CCGC 2 cut(s) 348, 1826
BspANI GGCC 1 cut(s) 115
BspLI GGNNCC 2 cut(s) 700, 1791
BspMAI CTGCAG 2 cut(s) 199, 634
BspOI GCTAGC 1 cut(s) 1740
BspPI GGATC 3 cut(s) 203, 590, 607
BspQI GCTCTTC 2 cut(s) 909, 1626
BspT104I TTCGAA 2 cut(s) 973, 995
BspT107I GGYRCC 1 cut(s) 1789
BsrDI GCAATG 1 cut(s) 1817
BsrGI TGTACA 1 cut(s) 721
BsrI ACTGG 3 cut(s) 102, 272, 533
BssECI CCNNGG 1 cut(s) 416
BssMI GATC 7 cut(s) 208, 397, 582, 599, 1026, 1112, 1186
BssNI GRCGYC 1 cut(s) 613
BssSI CACGAG 1 cut(s) 141
BssT1I CCWWGG 1 cut(s) 416
Bst2BI CACGAG 1 cut(s) 141
Bst2UI CCWGG 3 cut(s) 465, 1001, 1849
Bst4CI ACNGT 6 cut(s) 409, 1207, 1267, 1696, 1903, 1908
Bst6I CTCTTC 4 cut(s) 909, 1485, 1523, 1626
BstACI GRCGYC 1 cut(s) 613
BstAPI GCANNNNNTGC 1 cut(s) 476
BstAUI TGTACA 1 cut(s) 721
BstBAI YACGTR 1 cut(s) 574
BstBI TTCGAA 2 cut(s) 973, 995
BstC8I GCNNGC 5 cut(s) 117, 379, 830, 1013, 1738
BstDEI CTNAG 4 cut(s) 147, 767, 1244, 1730
BstEII GGTNACC 1 cut(s) 1003
BstF5I GGATG 1 cut(s) 1892
BstH2I RGCGCY 1 cut(s) 971
BstHHI GCGC 3 cut(s) 970, 1368, 1854
BstKTI GATC 7 cut(s) 211, 400, 585, 602, 1029, 1115, 1189
BstMBI GATC 7 cut(s) 208, 397, 582, 599, 1026, 1112, 1186
BstMWI GCNNNNNNNGC 4 cut(s) 476, 1365, 1453, 1733
BstNI CCWGG 3 cut(s) 465, 1001, 1849
BstNSI RCATGY 2 cut(s) 381, 1015
BstPI GGTNACC 1 cut(s) 1003
BstSCI CCNGG 3 cut(s) 463, 999, 1847
BstSFI CTRYAG 2 cut(s) 195, 630
BstSLI GKGCMC 2 cut(s) 564, 851
BstV1I GCAGC 4 cut(s) 264, 644, 1856, 1866
BstV2I GAAGAC 5 cut(s) 193, 752, 1208, 1268, 1479
BstX2I RGATCY 1 cut(s) 582
BstYI RGATCY 1 cut(s) 582
Bsu36I CCTNAGG 1 cut(s) 1244
BsuI GTATCC 1 cut(s) 526
BsuRI GGCC 1 cut(s) 115
BtgZI GCGATG 1 cut(s) 1519
BtsCI GGATG 1 cut(s) 1892
BtsI GCAGTG 1 cut(s) 1649
BtsIMutI CAGTG 4 cut(s) 109, 1212, 1649, 1913
Cac8I GCNNGC 5 cut(s) 117, 379, 830, 1013, 1738
CfoI GCGC 3 cut(s) 970, 1368, 1854
Cfr13I GGNCC 1 cut(s) 113
CseI GACGC 2 cut(s) 602, 1348
CsiI ACCWGGT 2 cut(s) 463, 999
Csp6I GTAC 6 cut(s) 122, 497, 722, 1348, 1790, 1904
CviAII CATG 5 cut(s) 378, 1012, 1060, 1363, 1539
CviQI GTAC 6 cut(s) 122, 497, 722, 1348, 1790, 1904
DdeI CTNAG 4 cut(s) 147, 767, 1244, 1730
DpnI GATC 7 cut(s) 210, 399, 584, 601, 1028, 1114, 1188
DpnII GATC 7 cut(s) 208, 397, 582, 599, 1026, 1112, 1186
Eam1104I CTCTTC 4 cut(s) 909, 1485, 1523, 1626
EarI CTCTTC 4 cut(s) 909, 1485, 1523, 1626
Ecl136II GAGCTC 2 cut(s) 1218, 1804
Eco130I CCWWGG 1 cut(s) 416
Eco24I GRGCYC 2 cut(s) 1220, 1806
Eco32I GATATC 1 cut(s) 1047
Eco53kI GAGCTC 2 cut(s) 1218, 1804
Eco57I CTGAAG 1 cut(s) 1280
Eco81I CCTNAGG 1 cut(s) 1244
Eco88I CYCGRG 1 cut(s) 1805
Eco91I GGTNACC 1 cut(s) 1003
EcoICRI GAGCTC 2 cut(s) 1218, 1804
EcoO65I GGTNACC 1 cut(s) 1003
EcoRII CCWGG 3 cut(s) 463, 999, 1847
EcoRV GATATC 1 cut(s) 1047
EcoT14I CCWWGG 1 cut(s) 416
EcoT38I GRGCYC 2 cut(s) 1220, 1806
ErhI CCWWGG 1 cut(s) 416
FaeI CATG 5 cut(s) 381, 1015, 1063, 1366, 1542
FaqI GGGAC 4 cut(s) 535, 1644, 1687, 1904
FatI CATG 5 cut(s) 377, 1011, 1059, 1362, 1538
FauNDI CATATG 1 cut(s) 1546
FbaI TGATCA 1 cut(s) 397
Fnu4HI GCNGC 5 cut(s) 278, 633, 1827, 1845, 1855
FokI GGATG 1 cut(s) 1899
FriOI GRGCYC 2 cut(s) 1220, 1806
Fsp4HI GCNGC 5 cut(s) 278, 633, 1827, 1845, 1855
FspBI CTAG 5 cut(s) 491, 810, 1689, 1737, 1872
GlaI GCGC 3 cut(s) 969, 1367, 1853
GluI GCNGC 5 cut(s) 278, 633, 1827, 1845, 1855
HaeII RGCGCY 1 cut(s) 971
HaeIII GGCC 1 cut(s) 115
HgaI GACGC 2 cut(s) 602, 1348
HhaI GCGC 3 cut(s) 970, 1368, 1854
Hin1I GRCGYC 1 cut(s) 613
Hin1II CATG 5 cut(s) 381, 1015, 1063, 1366, 1542
Hin6I GCGC 3 cut(s) 968, 1366, 1852
HinP1I GCGC 3 cut(s) 968, 1366, 1852
HincII GTYRAC 2 cut(s) 16, 328
HindII GTYRAC 2 cut(s) 16, 328
HinfI GANTC 4 cut(s) 51, 68, 1100, 1270
HphI GGTGA 2 cut(s) 1279, 1628
Hpy166II GTNNAC 2 cut(s) 16, 328
Hpy188I TCNGA 3 cut(s) 73, 1260, 1672
Hpy188III TCNNGA 5 cut(s) 390, 491, 520, 939, 1274
Hpy8I GTNNAC 2 cut(s) 16, 328
HpyAV CCTTC 3 cut(s) 104, 1126, 1379
HpyCH4III ACNGT 6 cut(s) 409, 1207, 1267, 1696, 1903, 1908
HpyCH4IV ACGT 4 cut(s) 21, 364, 573, 1563
HpyF10VI GCNNNNNNNGC 4 cut(s) 476, 1365, 1453, 1733
HpyF3I CTNAG 4 cut(s) 147, 767, 1244, 1730
HpySE526I ACGT 4 cut(s) 21, 364, 573, 1563
Hsp92I GRCGYC 1 cut(s) 613
Hsp92II CATG 5 cut(s) 381, 1015, 1063, 1366, 1542
HspAI GCGC 3 cut(s) 968, 1366, 1852
KpnI GGTACC 1 cut(s) 1793
Ksp22I TGATCA 1 cut(s) 397
Kzo9I GATC 7 cut(s) 208, 397, 582, 599, 1026, 1112, 1186
LguI GCTCTTC 2 cut(s) 909, 1626
LmnI GCTCC 1 cut(s) 698
Lsp1109I GCAGC 4 cut(s) 264, 644, 1856, 1866
LweI GCATC 2 cut(s) 1456, 1542
MabI ACCWGGT 2 cut(s) 463, 999
MaeI CTAG 5 cut(s) 491, 810, 1689, 1737, 1872
MaeII ACGT 4 cut(s) 21, 364, 573, 1563
MaeIII GTNAC 4 cut(s) 916, 948, 1003, 1207
MalI GATC 7 cut(s) 210, 399, 584, 601, 1028, 1114, 1188
MboI GATC 7 cut(s) 208, 397, 582, 599, 1026, 1112, 1186
MfeI CAATTG 1 cut(s) 27
MflI RGATCY 1 cut(s) 582
MhlI GDGCHC 4 cut(s) 564, 851, 1220, 1806
MlyI GAGTC 2 cut(s) 60, 77
MmeI TCCRAC 1 cut(s) 722
MnlI CCTC 8 cut(s) 80, 487, 1486, 1607, 1672, 1711, 1780, 1803
MroXI GAANNNNTTC 1 cut(s) 170
MseI TTAA 5 cut(s) 357, 980, 1083, 1125, 1607
MslI CAYNNNNRTG 5 cut(s) 557, 607, 912, 1654, 1881
MspR9I CCNGG 3 cut(s) 465, 1001, 1849
MunI CAATTG 1 cut(s) 27
Mva1269I GAATGC 2 cut(s) 159, 1649
MvaI CCWGG 3 cut(s) 465, 1001, 1849
MwoI GCNNNNNNNGC 4 cut(s) 476, 1365, 1453, 1733
NdeI CATATG 1 cut(s) 1546
NdeII GATC 7 cut(s) 208, 397, 582, 599, 1026, 1112, 1186
NheI GCTAGC 1 cut(s) 1736
NlaIII CATG 5 cut(s) 381, 1015, 1063, 1366, 1542
NlaIV GGNNCC 2 cut(s) 700, 1791
NmuCI GTSAC 3 cut(s) 916, 948, 1207
NspI RCATGY 2 cut(s) 381, 1015
NspV TTCGAA 2 cut(s) 973, 995
OliI CACNNNNGTG 1 cut(s) 607
PaeI GCATGC 2 cut(s) 381, 1015
PaeR7I CTCGAG 1 cut(s) 1805
PciSI GCTCTTC 2 cut(s) 909, 1626
PctI GAATGC 2 cut(s) 159, 1649
PdmI GAANNNNTTC 1 cut(s) 170
PfeI GAWTC 2 cut(s) 1100, 1270
PkrI GCNGC 5 cut(s) 279, 634, 1828, 1846, 1856
PleI GAGTC 2 cut(s) 59, 76
PpsI GAGTC 2 cut(s) 59, 76
Ppu21I YACGTR 1 cut(s) 574
Psp124BI GAGCTC 2 cut(s) 1220, 1806
Psp1406I AACGTT 1 cut(s) 1563
Psp6I CCWGG 3 cut(s) 463, 999, 1847
PspEI GGTNACC 1 cut(s) 1003
PspGI CCWGG 3 cut(s) 463, 999, 1847
PspN4I GGNNCC 2 cut(s) 700, 1791
PspPI GGNCC 1 cut(s) 113
PspXI VCTCGAGB 1 cut(s) 1805
PstI CTGCAG 2 cut(s) 199, 634
PsuI RGATCY 1 cut(s) 582
RsaI GTAC 6 cut(s) 123, 498, 723, 1349, 1791, 1905
RsaNI GTAC 6 cut(s) 122, 497, 722, 1348, 1790, 1904
RseI CAYNNNNRTG 5 cut(s) 557, 607, 912, 1654, 1881
SacI GAGCTC 2 cut(s) 1220, 1806
SapI GCTCTTC 2 cut(s) 909, 1626
SaqAI TTAA 5 cut(s) 357, 980, 1083, 1125, 1607
SatI GCNGC 5 cut(s) 278, 633, 1827, 1845, 1855
Sau3AI GATC 7 cut(s) 208, 397, 582, 599, 1026, 1112, 1186
Sau96I GGNCC 1 cut(s) 113
SchI GAGTC 2 cut(s) 60, 77
ScrFI CCNGG 3 cut(s) 465, 1001, 1849
SduI GDGCHC 4 cut(s) 564, 851, 1220, 1806
SexAI ACCWGGT 2 cut(s) 463, 999
SfaNI GCATC 2 cut(s) 1456, 1542
SfcI CTRYAG 2 cut(s) 195, 630
Sfr274I CTCGAG 1 cut(s) 1805
SfuI TTCGAA 2 cut(s) 973, 995
SlaI CTCGAG 1 cut(s) 1805
SmiMI CAYNNNNRTG 5 cut(s) 557, 607, 912, 1654, 1881
SmlI CTYRAG 3 cut(s) 1406, 1794, 1805
SmoI CTYRAG 3 cut(s) 1406, 1794, 1805
SphI GCATGC 2 cut(s) 381, 1015
SsiI CCGC 2 cut(s) 348, 1826
SspMI CTAG 5 cut(s) 491, 810, 1689, 1737, 1872
SstI GAGCTC 2 cut(s) 1220, 1806
StyD4I CCNGG 3 cut(s) 463, 999, 1847
StyI CCWWGG 1 cut(s) 416
TaaI ACNGT 6 cut(s) 409, 1207, 1267, 1696, 1903, 1908
TaiI ACGT 4 cut(s) 24, 367, 576, 1566
TaqI TCGA 6 cut(s) 973, 995, 1037, 1716, 1806, 1835
TatI WGTACW 4 cut(s) 121, 721, 1347, 1903
TauI GCSGC 1 cut(s) 1829
TfiI GAWTC 2 cut(s) 1100, 1270
Tru1I TTAA 5 cut(s) 357, 980, 1083, 1125, 1607
Tru9I TTAA 5 cut(s) 357, 980, 1083, 1125, 1607
TscAI CASTG 4 cut(s) 109, 1212, 1649, 1913
TseFI GTSAC 3 cut(s) 916, 948, 1207
TseI GCWGC 4 cut(s) 277, 632, 1844, 1854
Tsp45I GTSAC 3 cut(s) 916, 948, 1207
TspGWI ACGGA 2 cut(s) 595, 1799
TspRI CASTG 4 cut(s) 109, 1212, 1649, 1913
XbaI TCTAGA 1 cut(s) 490
XceI RCATGY 2 cut(s) 381, 1015
XhoI CTCGAG 1 cut(s) 1805
XmnI GAANNNNTTC 1 cut(s) 170
XspI CTAG 5 cut(s) 491, 810, 1689, 1737, 1872
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.