Rh5AG347000

Cyclic nucleotide-gated ion channel 1-like

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5A
Physical Location & Seq
Forward (+)
57252013 .. 57257258
5246 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5AG347000.1

Sequence Viewer

Length: 1731 bp
ATGAGATTAAATAATATTTGCTGTTTCTTGGTCAGAGAATTATCAAAGCACCCTGGTGTACCAATAGTCTGCGCAATGATAATGGTCATTTTTCCACCATTACAACTACTGGATCATTCCGGTCATGATGGAATATTAGGCGTATCATGTATGTTGTATCTGTTCCTGGATCCTCTGTTTCTGTACGCGCCTCTTATCAACGAGCAAACCAAGTGTGTCGTGTTTGACAACAGAGTGAAGATAGCAGCTCTTGTTCTTCGATCATTAGGAGATGTTTGTCACCTAATCAGAATATATCTTCACATTAAGGATGGATGGTGGAAGTCCCCTTCTCTTAGGAAAAAGCTGAGGCTAGCAAATGACACGGTGTCTATTCTTCCTATTCCACAAGTTGCAATTTTAATTTTTTTTCCAAACATGAGGGGCTCCAACTCTTTGAAGACAATGACATTTCTCAACTCCCTTATTGTATTGCAATATCTTCCACGAGTTTACCCCATCTATGTACTATTTGATGAAATAATTAATACGCAGACCATTGGCTATAGGAGAGACAGGAATCCAAAATGGTCGTCAATCGTCGTCGATTCAAAATGGTCATCAATTGTCGTCAATATGATTGGGTACATTATTGCCAGCCATATATTCGGAGCATTTTGGTATTTTTTCTCCATCCAAAGAGAGATACAGTGTTGGGAACATGCTTGTAGAATGGAAAATGGATGTGAATTTAGTACTTCATGCGTTCGAAATACACACAGAAATCTCCAATTTTTAAATGAGAAGTGCCCTATGAATCCACCAAATAAACAAGTATTCGATTTTGGCGTATTTCAAGATGCTTTACAATCCGACATGCCAAGATCAACCAATTTTTCACAAAAATTCTTGCAGTGTTTATCATGGGGCATACGAAATATGAGTTCTTTTGGTTCAAACCTCAATGCTACCAGTGCAAATAGAGGGGAAAACCTGCTTGTGGTTATCTTTTCGATATGTGGCTTGGGACTATTTATGTATCTCTTGGGGCATGTGCAGACATTTATGCAGAAAGTTAGCAAATCATGTACTATCCGACAGAAAATGAAAATGACTAATATACGATCCATACTAAACAAATATGGCCTGTCTGATGAGAATCATGAGATGGAGAGGAAAATCAAGCTTGCGGTAAAAGATAAACTTGAAGAAGATGACAGTCATATTGTCGAGGATATGTTTTCGATTCTTTCCTTAGGAGAAGCTGAAAATTTAGCTATGGAGATCAAATGCAATCTCTTCATGGATAAGCTCAAGAAAGTCGATGGGCTTAAAGATAAAGGGATAGAAGTTTTGAAAAAAATCTGTGAGCATTTTGAGCCAATGATCTACAGTAGGGGATGCTACATTATTCGAGAGGGGGAGCCACTTGATATGATGTTCTTCGTCACACGGGGCAGTGTACTCACCTATGCGACTAATAATGGTGGATCAAATGGTTCTTCAGGTACTATCCAACTTGAGAAAGAGAAAAATGGTTTGTATGGTAAAGAGCTTCTAACTTGGGCAGAAGGATGTTCTAGCAAATTGTCCAACTTACCGATCTCTACCATAACTGTCAAGTCCCACAACAAAGTTGAAGTCTTTGCACTCCTCGCCACCGATTTACAGCGTATTGTCTCTAATTTTCCGAGTCAATTCAACATGGGCAATATCCTCAACATAGCTGTCGATAATGAAATGGTGAACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

576

Amino Acids

65.63

Weight (kDa)

8.67

Isoelectric Point (pI)

37.53

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000017)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07351 FvH4_1g11800 FvH4_1g11800 FvH4_1g11800 FvH4_1g11800 FvH4_1g11800 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_4g14360 FvH4_6g13561 FvH4_6g13562 FvH4_6g13580 FvH4_6g13590 FvH4_6g13590 FvH4_6g13590 FvH4_6g13731 FvH4_6g13770 FvH4_6g13800 FvH4_6g13800 FvH4_6g13860 FvH4_6g13870 FvH4_6g13870 FvH4_6g13870 FvH4_6g13870 FvH4_6g13870 FvH4_6g13890 FvH4_6g33801 FvH4_7g13020 FvH4_7g13270 FvH4_7g13270 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g14580 FvH4_7g14580 FvH4_7g14580 FvH4_7g14600 FvH4_7g14600 FvH4_7g20030 FvH4_7g20510 FvH4_7g20510 FvH4_7g20510 FvH4_7g20670 FvH4_7g20670 FvH4_7g20670 FvH4_7g20670 FvH4_7g20690 FvH4_7g20690 FvH4_7g31930 FvH4_7g31930 FvH4_7g31940 FvH4_7g31940
malus_domestica MD01G1115700.v1.1 MD01G1115800.v1.1 MD01G1116600.v1.1 MD01G1116700.v1.1 MD01G1117000.v1.1 MD01G1225000.v1.1 MD02G1077900.v1.1 MD02G1078000.v1.1 MD02G1078200.v1.1 MD02G1078400.v1.1 MD02G1084300.v1.1 MD04G1004700.v1.1 MD04G1123100.v1.1 MD04G1123200.v1.1 MD04G1128000.v1.1 MD04G1128400.v1.1 MD05G1299700.v1.1 MD05G1300000.v1.1 MD07G1184000.v1.1 MD07G1292300.v1.1 MD08G1214800.v1.1
prunus_persica Prupe.1G205100_v2.0.a1 Prupe.1G205100_v2.0.a1 Prupe.1G205200_v2.0.a1 Prupe.2G222300_v2.0.a1 Prupe.2G223300_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223600_v2.0.a1 Prupe.2G223600_v2.0.a1 Prupe.2G223600_v2.0.a1 Prupe.2G223700_v2.0.a1 Prupe.2G223700_v2.0.a1 Prupe.2G223700_v2.0.a1 Prupe.2G223700_v2.0.a1 Prupe.2G223800_v2.0.a1 Prupe.2G223900_v2.0.a1 Prupe.2G224000_v2.0.a1 Prupe.5G162000_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G291000_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G210400_v2.0.a1 Prupe.7G210600_v2.0.a1 Prupe.7G210700_v2.0.a1 Prupe.7G210800_v2.0.a1 Prupe.7G210900_v2.0.a1 Prupe.8G097600_v2.0.a1 Prupe.8G097800_v2.0.a1 Prupe.8G097800_v2.0.a1
pyrus_communis pycom01g14430 pycom01g14440 pycom01g23130 pycom01g23160 pycom01g23330 pycom02g06210 pycom02g06220 pycom02g06250 pycom02g06270 pycom02g06710 pycom03g05360 pycom03g05380 pycom04g11470 pycom04g11480 pycom04g11520 pycom04g11560 pycom04g11600 pycom04g11610 pycom04g11650 pycom04g11660 pycom04g11670 pycom05g27790 pycom07g17630 pycom08g20960 pycom126g00020 pycom126g00030
rosa_chinensis RchiOBHm_Chr1g0318251 RchiOBHm_Chr1g0318731 RchiOBHm_Chr1g0339101 RchiOBHm_Chr1g0339111 RchiOBHm_Chr1g0347151 RchiOBHm_Chr1g0347161 RchiOBHm_Chr1g0347221 RchiOBHm_Chr1g0352401 RchiOBHm_Chr1g0352441 RchiOBHm_Chr1g0352461 RchiOBHm_Chr1g0356131 RchiOBHm_Chr1g0363991 RchiOBHm_Chr1g0364791 RchiOBHm_Chr1g0364801 RchiOBHm_Chr1g0364811 RchiOBHm_Chr1g0364851 RchiOBHm_Chr1g0364951 RchiOBHm_Chr1g0370821 RchiOBHm_Chr1g0381221 RchiOBHm_Chr1g0381231 RchiOBHm_Chr1g0381261 RchiOBHm_Chr1g0381271 RchiOBHm_Chr1g0381341 RchiOBHm_Chr1g0381351 RchiOBHm_Chr1g0381391 RchiOBHm_Chr1g0381801 RchiOBHm_Chr1g0381821 RchiOBHm_Chr2g0093241 RchiOBHm_Chr2g0116391 RchiOBHm_Chr3g0466441 RchiOBHm_Chr3g0466631 RchiOBHm_Chr3g0466651 RchiOBHm_Chr3g0496921 RchiOBHm_Chr4g0400441 RchiOBHm_Chr4g0400501 RchiOBHm_Chr4g0400511 RchiOBHm_Chr4g0400691 RchiOBHm_Chr4g0400701 RchiOBHm_Chr4g0404331 RchiOBHm_Chr5g0052101 RchiOBHm_Chr5g0052111 RchiOBHm_Chr5g0052171 RchiOBHm_Chr5g0052181 RchiOBHm_Chr6g0264161 RchiOBHm_Chr6g0265551 RchiOBHm_Chr7g0213571 RchiOBHm_Chr7g0213581
rosa_laevigata RLG00000002796 RLG00000003261 RLG00000007935 RLG00000007936 RLG00000009187 RLG00000014179 RLG00000016381 RLG00000018265 RLG00000024558 RLG00000024574 RLG00000026232 RLG00000026234 RLG00000026236 RLG00000026237 RLG00000027459 RLG00000027461 RLG00000027463 RLG00000027530 RLG00000028103 RLG00000028304 RLG00000028333 RLG00000029214 RLG00000029848 RLG00000029951 RLG00000030115 RLG00000030552 RLG00000033668 RLG00000034840 RLG00000034841 RLG00000034842 RLG00000035830
rosa_multiflora Rmu_sc0000654.1_g000004 Rmu_sc0000675.1_g000025 Rmu_sc0001075.1_g000002 Rmu_sc0001726.1_g000004 Rmu_sc0001772.1_g000061 Rmu_sc0001772.1_g000065 Rmu_sc0002067.1_g000002 Rmu_sc0002183.1_g000001 Rmu_sc0002183.1_g000006 Rmu_sc0002244.1_g000003 Rmu_sc0002313.1_g000004 Rmu_sc0002319.1_g000004 Rmu_sc0002539.1_g000085 Rmu_sc0002636.1_g000004 Rmu_sc0003229.1_g000007 Rmu_sc0003313.1_g000020 Rmu_sc0003546.1_g000007 Rmu_sc0003724.1_g000015 Rmu_sc0003936.1_g000029 Rmu_sc0004191.1_g000067 Rmu_sc0004525.1_g000012 Rmu_sc0005122.1_g000009 Rmu_sc0005255.1_g000040 Rmu_sc0005338.1_g000016 Rmu_sc0005584.1_g000008 Rmu_sc0006460.1_g000013 Rmu_sc0006872.1_g000011 Rmu_sc0006872.1_g000015 Rmu_sc0006872.1_g000016 Rmu_sc0006952.1_g000013 Rmu_sc0007342.1_g000005 Rmu_sc0007342.1_g000006 Rmu_sc0008418.1_g000003 Rmu_sc0008418.1_g000006 Rmu_sc0008636.1_g000007 Rmu_sc0008636.1_g000008 Rmu_sc0009205.1_g000014 Rmu_sc0009365.1_g000014 Rmu_sc0009917.1_g000002 Rmu_sc0019289.1_g000003 Rmu_ssc0000098.1_g000011 Rmu_ssc0000098.1_g000012 Rmu_ssc0000167.1_g000018 Rmu_ssc0000167.1_g000024 Rmu_ssc0000326.1_g000015
rosa_roxburghii Rroxscaffold_166G00440780 Rroxscaffold_176G00431500 Rroxscaffold_1G00015080 Rroxscaffold_1G00027880 Rroxscaffold_1G00027890 Rroxscaffold_1G00027920 Rroxscaffold_2G00127250 Rroxscaffold_2G00148380 Rroxscaffold_3G00219450 Rroxscaffold_3G00232170 Rroxscaffold_3G00232210 Rroxscaffold_3G00242230 Rroxscaffold_3G00242240 Rroxscaffold_3G00244790 Rroxscaffold_3G00245790 Rroxscaffold_4G00278400 Rroxscaffold_4G00278430 Rroxscaffold_4G00278670 Rroxscaffold_4G00278680 Rroxscaffold_4G00278690 Rroxscaffold_4G00278700 Rroxscaffold_4G00278720 Rroxscaffold_4G00291690 Rroxscaffold_4G00292070 Rroxscaffold_4G00292090 Rroxscaffold_4G00292770 Rroxscaffold_4G00302240 Rroxscaffold_4G00302860 Rroxscaffold_4G00311320 Rroxscaffold_4G00311330 Rroxscaffold_4G00320570 Rroxscaffold_4G00322050 Rroxscaffold_4G00329480 Rroxscaffold_4G00329730 Rroxscaffold_5G00345500 Rroxscaffold_5G00345510 Rroxscaffold_5G00360830 Rroxscaffold_5G00360840 Rroxscaffold_6G00393450 Rroxscaffold_6G00404030 Rroxscaffold_6G00414220 Rroxscaffold_6G00414230 Rroxscaffold_6G00414280 Rroxscaffold_6G00414290 Rroxscaffold_6G00414350 Rroxscaffold_6G00414470 Rroxscaffold_7G00202570 Rroxscaffold_7G00203460 Rroxscaffold_7G00203470
rosa_rugosa Rorug01G0020500 Rorug01G0020600 Rorug01G0020700 Rorug01G0143700.1 Rorug01G0225700 Rorug01G0228500 Rorug01G0228600 Rorug01G0228600 Rorug01G0228700 Rorug01G0228800 Rorug01G0228800 Rorug01G0229000 Rorug01G0229300 Rorug01G0229400 Rorug01G0229600 Rorug01G0229700 Rorug01G0232200 Rorug01G0232600 Rorug01G0232600 Rorug01G0311900 Rorug01G0311900 Rorug01G0318400 Rorug01G0318500 Rorug01G0318500 Rorug01G0318500 Rorug01G0427900 Rorug01G0427900 Rorug01G0428000 Rorug01G0428200 Rorug01G0428300 Rorug01G0428400 Rorug01G0431500 Rorug01G0431600 Rorug01G0431600 Rorug02G0033800 Rorug02G0206300 Rorug03G0081900 Rorug03G0083200 Rorug03G0083200 Rorug03G0083300 Rorug04G0025100 Rorug04G0025100 Rorug04G0025200 Rorug04G0025300 Rorug04G0058600 Rorug04G0058700 Rorug04G0058800 Rorug04G0098400 Rorug04G0098500 Rorug05G0274500 Rorug05G0274600 Rorug05G0274800 Rorug06G0008500 Rorug06G0009100 Rorug06G0018000
rosa_samantha Rh1AG031700 Rh1AG036100 Rh1AG089800 Rh1AG239800 Rh1AG239900 Rh1AG242000 Rh1AG242300 Rh1AG245600 Rh1AG262600 Rh1AG319700 Rh1AG319800 Rh1AG319900 Rh1AG327200 Rh1AG451100 Rh1AG451200 Rh1AG451300 Rh1AG451600 Rh1AG451700 Rh1BG027200 Rh1BG071600 Rh1BG090700 Rh1BG211000 Rh1BG213000 Rh1BG213500 Rh1BG282800 Rh1BG288400 Rh1BG408100 Rh1BG408200 Rh1BG408400 Rh1BG408700 Rh1CG026300 Rh1CG028300 Rh1CG224100 Rh1CG226000 Rh1CG226100 Rh1CG229300 Rh1CG229400 Rh1CG245900 Rh1CG299200 Rh1CG299400 Rh1CG299500 Rh1CG303300 Rh1CG305100 Rh1CG422500 Rh1CG422600 Rh1CG422700 Rh1CG422800 Rh1CG422900 Rh1CG423100 Rh1CG423300 Rh1CG423400 Rh1CG426300 Rh1CG426600 Rh1DG239300 Rh1DG239600 Rh1DG258300 Rh1DG314200 Rh1DG314300 Rh1DG314400 Rh1DG320000 Rh1DG439200 Rh1DG439400 Rh1DG439500 Rh1DG439700 Rh1DG440000 Rh1DG443800 Rh2AG261800 Rh2BG080900 Rh2CG083300 Rh2DG078900 Rh2DG270000 Rh2DG270100 Rh3AG128400 Rh3AG130100 Rh3AG130500 Rh3AG332500 Rh3AG332600 Rh3AG332800 Rh3BG149700 Rh3BG151500 Rh3CG151400 Rh3CG354500 Rh3CG366800 Rh3DG150500 Rh3DG152200 Rh4AG101400 Rh4AG102900 Rh4AG148300 Rh4AG148600 Rh4BG098000 Rh4CG111100 Rh4CG111300 Rh4CG155100 Rh4DG094800 Rh5AG213600 Rh5AG346900 Rh5AG347000 Rh5BG357500 Rh5BG357700 Rh5BG485400 Rh5CG383100 Rh5CG383200 Rh5CG383300 Rh5CG509900 Rh5DG373000 Rh5DG373200 Rh6BG054300 Rh6BG126300 Rh6CG125100 Rh6CG185300 Rh6DG177000 Rh7AG276100 Rh7AG276200 Rh7BG230500 Rh7BG270500 Rh7BG364000 Rh7CG250100 Rh7CG295200 Rh7CG295300 Rh7DG389700
rosa_wichuraiana Rw0G001190 Rw0G010680 Rw0G013360 Rw0G014310 Rw0G014890 Rw0G020310 Rw0G021350 Rw0G022510 Rw1G003360 Rw1G004330 Rw1G006930 Rw1G008310 Rw1G021090 Rw1G021150 Rw1G021210 Rw1G023200 Rw1G023210 Rw1G028340 Rw1G028350 Rw1G028990 Rw1G032510 Rw1G039370 Rw1G039400 Rw1G039410 Rw1G039420 Rw1G039430 Rw2G006700 Rw2G020550 Rw2G020580 Rw3G012130 Rw3G012300 Rw3G012310 Rw3G028220 Rw3G029230 Rw5G021600 Rw5G032790 Rw6G011240 Rw7G027670 Rw7G032780

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 73
Acc36I ACCTGC 1 cut(s) 981
AccII CGCG 1 cut(s) 188
AciI CCGC 1 cut(s) 1169
AclWI GGATC 5 cut(s) 120, 164, 177, 1098, 1477
AcsI RAATTY 3 cut(s) 728, 884, 1249
AcuI CTGAAG 1 cut(s) 1467
AfaI GTAC 8 cut(s) 60, 185, 507, 626, 736, 1069, 1443, 1489
AfiI CCNNNNNNNGG 1 cut(s) 979
AgsI TTSAA 8 cut(s) 439, 591, 836, 936, 1187, 1336, 1619, 1681
AhdI GACNNNNNGTC 1 cut(s) 367
AjnI CCWGG 2 cut(s) 52, 165
AleI CACNNNNGTG 1 cut(s) 54
AluBI AGCT 8 cut(s) 248, 346, 1165, 1244, 1256, 1291, 1534, 1706
AluI AGCT 8 cut(s) 248, 346, 1165, 1244, 1256, 1291, 1534, 1706
Alw26I GTCTC 2 cut(s) 546, 1663
AlwI GGATC 5 cut(s) 120, 164, 177, 1098, 1477
AoxI GGCC 1 cut(s) 1123
ApeKI GCWGC 1 cut(s) 245
ApoI RAATTY 3 cut(s) 728, 884, 1249
ArsI GACNNNNNNTTYG 4 cut(s) 557, 589, 1605, 1637
AseI ATTAAT 1 cut(s) 525
AspLEI GCGC 2 cut(s) 74, 190
AsuHPI GGTGA 2 cut(s) 272, 1438
AsuII TTCGAA 1 cut(s) 748
AsuNHI GCTAGC 1 cut(s) 352
AxyI CCTNAGG 1 cut(s) 1234
BaeGI GKGCMC 1 cut(s) 791
BamHI GGATCC 1 cut(s) 169
BanII GRGCYC 1 cut(s) 428
BauI CACGAG 1 cut(s) 486
BbsI GAAGAC 1 cut(s) 446
BbvCI CCTCAGC 1 cut(s) 347
BbvI GCAGC 1 cut(s) 257
BccI CCATC 7 cut(s) 122, 305, 309, 506, 680, 1141, 1298
BciT130I CCWGG 2 cut(s) 54, 167
BcoDI GTCTC 2 cut(s) 546, 1663
BfaI CTAG 2 cut(s) 353, 1560
BfmI CTRYAG 2 cut(s) 544, 1369
BfuAI ACCTGC 1 cut(s) 981
BisI GCNGC 1 cut(s) 246
BlsI GCNGC 1 cut(s) 247
BmcAI AGTACT 1 cut(s) 736
Bme1390I CCNGG 2 cut(s) 54, 167
BmeRI GACNNNNNGTC 1 cut(s) 367
BmiI GGNNCC 3 cut(s) 171, 427, 1404
BmrFI CCNGG 2 cut(s) 54, 167
BmsI GCATC 2 cut(s) 829, 1370
BmtI GCTAGC 1 cut(s) 356
BpiI GAAGAC 1 cut(s) 446
Bpu10I CCTNAGC 1 cut(s) 347
Bpu14I TTCGAA 1 cut(s) 748
BpuEI CTTGAG 2 cut(s) 1277, 1520
BsaBI GATNNNNATC 1 cut(s) 1137
BsaJI CCNNGG 1 cut(s) 52
BsaWI WCCGGW 1 cut(s) 119
Bsc4I CCNNNNNNNGG 1 cut(s) 979
Bse1I ACTGG 2 cut(s) 114, 951
Bse21I CCTNAGG 1 cut(s) 1234
Bse3DI GCAATG 1 cut(s) 81
Bse8I GATNNNNATC 1 cut(s) 1137
BseBI CCWGG 2 cut(s) 54, 167
BseDI CCNNGG 1 cut(s) 52
BseGI GGATG 6 cut(s) 316, 320, 672, 728, 1385, 1559
BseJI GATNNNNATC 1 cut(s) 1137
BseLI CCNNNNNNNGG 1 cut(s) 979
BseMI GCAATG 1 cut(s) 81
BseMII CTCAG 1 cut(s) 338
BseNI ACTGG 2 cut(s) 114, 951
BseRI GAGGAG 1 cut(s) 1622
BseSI GKGCMC 1 cut(s) 791
BseXI GCAGC 1 cut(s) 257
BsgI GTGCAG 1 cut(s) 1055
Bsh1236I CGCG 1 cut(s) 188
BshFI GGCC 1 cut(s) 1125
BsiSI CCGG 1 cut(s) 120
BslFI GGGAC 3 cut(s) 310, 1020, 1588
BslI CCNNNNNNNGG 1 cut(s) 979
BsmAI GTCTC 2 cut(s) 546, 1663
BsmFI GGGAC 3 cut(s) 310, 1020, 1588
BsnI GGCC 1 cut(s) 1125
Bsp119I TTCGAA 1 cut(s) 748
Bsp1286I GDGCHC 2 cut(s) 428, 791
Bsp143I GATC 9 cut(s) 112, 169, 260, 863, 1103, 1263, 1365, 1469, 1581
BspACI CCGC 1 cut(s) 1169
BspANI GGCC 1 cut(s) 1125
BspCNI CTCAG 1 cut(s) 339
BspFNI CGCG 1 cut(s) 188
BspHI TCATGA 2 cut(s) 124, 1141
BspLI GGNNCC 3 cut(s) 171, 427, 1404
BspMI ACCTGC 1 cut(s) 981
BspOI GCTAGC 1 cut(s) 356
BspPI GGATC 5 cut(s) 120, 164, 177, 1098, 1477
BspT104I TTCGAA 1 cut(s) 748
BsrDI GCAATG 1 cut(s) 81
BsrI ACTGG 2 cut(s) 114, 951
BssECI CCNNGG 1 cut(s) 52
BssMI GATC 9 cut(s) 112, 169, 260, 863, 1103, 1263, 1365, 1469, 1581
BssSI CACGAG 1 cut(s) 486
Bst2BI CACGAG 1 cut(s) 486
Bst2UI CCWGG 2 cut(s) 54, 167
Bst4CI ACNGT 5 cut(s) 367, 690, 1199, 1373, 1597
Bst6I CTCTTC 1 cut(s) 1283
BstBI TTCGAA 1 cut(s) 748
BstC8I GCNNGC 3 cut(s) 354, 637, 1167
BstDEI CTNAG 3 cut(s) 335, 347, 1234
BstF5I GGATG 6 cut(s) 316, 320, 672, 728, 1385, 1559
BstFNI CGCG 1 cut(s) 188
BstHHI GCGC 2 cut(s) 74, 190
BstKTI GATC 9 cut(s) 115, 172, 263, 866, 1106, 1266, 1368, 1472, 1584
BstMAI GTCTC 2 cut(s) 546, 1663
BstMBI GATC 9 cut(s) 112, 169, 260, 863, 1103, 1263, 1365, 1469, 1581
BstMWI GCNNNNNNNGC 3 cut(s) 953, 1357, 1634
BstNI CCWGG 2 cut(s) 54, 167
BstNSI RCATGY 3 cut(s) 704, 859, 1034
BstSCI CCNGG 2 cut(s) 52, 165
BstSFI CTRYAG 2 cut(s) 544, 1369
BstSLI GKGCMC 1 cut(s) 791
BstUI CGCG 1 cut(s) 188
BstV1I GCAGC 1 cut(s) 257
BstV2I GAAGAC 1 cut(s) 446
BstX2I RGATCY 1 cut(s) 169
BstYI RGATCY 1 cut(s) 169
Bsu36I CCTNAGG 1 cut(s) 1234
BsuRI GGCC 1 cut(s) 1125
BtsCI GGATG 6 cut(s) 316, 320, 672, 728, 1385, 1559
BtsI GCAGTG 2 cut(s) 899, 1444
BtsIMutI CAGTG 4 cut(s) 695, 899, 958, 1444
BveI ACCTGC 1 cut(s) 981
Cac8I GCNNGC 3 cut(s) 354, 637, 1167
CciI TCATGA 2 cut(s) 124, 1141
CfoI GCGC 2 cut(s) 74, 190
Csp6I GTAC 8 cut(s) 59, 184, 506, 625, 735, 1068, 1442, 1488
CviQI GTAC 8 cut(s) 59, 184, 506, 625, 735, 1068, 1442, 1488
DdeI CTNAG 3 cut(s) 335, 347, 1234
DpnI GATC 9 cut(s) 114, 171, 262, 865, 1105, 1265, 1367, 1471, 1583
DpnII GATC 9 cut(s) 112, 169, 260, 863, 1103, 1263, 1365, 1469, 1581
DraI TTTAAA 1 cut(s) 777
DriI GACNNNNNGTC 1 cut(s) 367
Eam1104I CTCTTC 1 cut(s) 1283
Eam1105I GACNNNNNGTC 1 cut(s) 367
EarI CTCTTC 1 cut(s) 1283
Eco24I GRGCYC 1 cut(s) 428
Eco57I CTGAAG 1 cut(s) 1467
Eco81I CCTNAGG 1 cut(s) 1234
EcoRII CCWGG 2 cut(s) 52, 165
EcoT38I GRGCYC 1 cut(s) 428
FalI AAGNNNNNCTT 2 cut(s) 1167, 1199
FaqI GGGAC 3 cut(s) 310, 1020, 1588
Fnu4HI GCNGC 1 cut(s) 246
FokI GGATG 6 cut(s) 323, 327, 659, 735, 1392, 1566
FriOI GRGCYC 1 cut(s) 428
Fsp4HI GCNGC 1 cut(s) 246
FspBI CTAG 2 cut(s) 353, 1560
FspI TGCGCA 1 cut(s) 73
GlaI GCGC 2 cut(s) 73, 189
GluI GCNGC 1 cut(s) 246
HaeIII GGCC 1 cut(s) 1125
HapII CCGG 1 cut(s) 120
HhaI GCGC 2 cut(s) 74, 190
Hin6I GCGC 2 cut(s) 72, 188
HinP1I GCGC 2 cut(s) 72, 188
HindIII AAGCTT 1 cut(s) 1163
HinfI GANTC 6 cut(s) 559, 587, 796, 1138, 1225, 1672
HpaII CCGG 1 cut(s) 120
HphI GGTGA 2 cut(s) 272, 1438
Hpy166II GTNNAC 4 cut(s) 59, 493, 1442, 1726
Hpy188I TCNGA 7 cut(s) 35, 290, 650, 853, 1076, 1132, 1671
Hpy188III TCNNGA 5 cut(s) 125, 836, 1142, 1294, 1394
Hpy8I GTNNAC 4 cut(s) 59, 493, 1442, 1726
Hpy99I CGWCG 2 cut(s) 584, 587
HpyAV CCTTC 2 cut(s) 339, 1544
HpyCH4III ACNGT 5 cut(s) 367, 690, 1199, 1373, 1597
HpyCH4V TGCA 8 cut(s) 395, 475, 892, 956, 1036, 1048, 1272, 1628
HpyF10VI GCNNNNNNNGC 3 cut(s) 953, 1357, 1634
HpyF3I CTNAG 3 cut(s) 335, 347, 1234
HspAI GCGC 2 cut(s) 72, 188
Kzo9I GATC 9 cut(s) 112, 169, 260, 863, 1103, 1263, 1365, 1469, 1581
LmnI GCTCC 3 cut(s) 431, 650, 1402
Lsp1109I GCAGC 1 cut(s) 257
LweI GCATC 2 cut(s) 829, 1370
MaeI CTAG 2 cut(s) 353, 1560
MaeIII GTNAC 2 cut(s) 278, 1426
MalI GATC 9 cut(s) 114, 171, 262, 865, 1105, 1265, 1367, 1471, 1583
MboI GATC 9 cut(s) 112, 169, 260, 863, 1103, 1263, 1365, 1469, 1581
MfeI CAATTG 1 cut(s) 603
MflI RGATCY 1 cut(s) 169
MhlI GDGCHC 2 cut(s) 428, 791
MlyI GAGTC 1 cut(s) 1681
MmeI TCCRAC 5 cut(s) 453, 876, 1099, 1519, 1596
MseI TTAA 6 cut(s) 8, 306, 401, 525, 776, 1311
MslI CAYNNNNRTG 1 cut(s) 54
MspI CCGG 1 cut(s) 120
MspR9I CCNGG 2 cut(s) 54, 167
MunI CAATTG 1 cut(s) 603
MvaI CCWGG 2 cut(s) 54, 167
MvnI CGCG 1 cut(s) 188
MwoI GCNNNNNNNGC 3 cut(s) 953, 1357, 1634
NdeII GATC 9 cut(s) 112, 169, 260, 863, 1103, 1263, 1365, 1469, 1581
NheI GCTAGC 1 cut(s) 352
NlaIV GGNNCC 3 cut(s) 171, 427, 1404
NmuCI GTSAC 2 cut(s) 278, 1426
NsbI TGCGCA 1 cut(s) 73
NspI RCATGY 3 cut(s) 704, 859, 1034
NspV TTCGAA 1 cut(s) 748
OliI CACNNNNGTG 1 cut(s) 54
PagI TCATGA 2 cut(s) 124, 1141
PcsI WCGNNNNNNNCGW 1 cut(s) 825
PfeI GAWTC 5 cut(s) 559, 587, 796, 1138, 1225
PfoI TCCNGGA 1 cut(s) 165
PkrI GCNGC 1 cut(s) 247
PleI GAGTC 1 cut(s) 1680
PpsI GAGTC 1 cut(s) 1680
PshBI ATTAAT 1 cut(s) 525
Psp6I CCWGG 2 cut(s) 52, 165
PspGI CCWGG 2 cut(s) 52, 165
PspN4I GGNNCC 3 cut(s) 171, 427, 1404
PsuI RGATCY 1 cut(s) 169
RsaI GTAC 8 cut(s) 60, 185, 507, 626, 736, 1069, 1443, 1489
RsaNI GTAC 8 cut(s) 59, 184, 506, 625, 735, 1068, 1442, 1488
RseI CAYNNNNRTG 1 cut(s) 54
SaqAI TTAA 6 cut(s) 8, 306, 401, 525, 776, 1311
SatI GCNGC 1 cut(s) 246
Sau3AI GATC 9 cut(s) 112, 169, 260, 863, 1103, 1263, 1365, 1469, 1581
ScaI AGTACT 1 cut(s) 736
SchI GAGTC 1 cut(s) 1681
ScrFI CCNGG 2 cut(s) 54, 167
SduI GDGCHC 2 cut(s) 428, 791
SfaNI GCATC 2 cut(s) 829, 1370
SfcI CTRYAG 2 cut(s) 544, 1369
SfuI TTCGAA 1 cut(s) 748
SmiMI CAYNNNNRTG 1 cut(s) 54
SmlI CTYRAG 2 cut(s) 1292, 1499
SmoI CTYRAG 2 cut(s) 1292, 1499
SsiI CCGC 1 cut(s) 1169
SspI AATATT 2 cut(s) 16, 135
SspMI CTAG 2 cut(s) 353, 1560
StyD4I CCNGG 2 cut(s) 52, 165
TaaI ACNGT 5 cut(s) 367, 690, 1199, 1373, 1597
TatI WGTACW 4 cut(s) 505, 734, 1067, 1441
TfiI GAWTC 5 cut(s) 559, 587, 796, 1138, 1225
Tru1I TTAA 6 cut(s) 8, 306, 401, 525, 776, 1311
Tru9I TTAA 6 cut(s) 8, 306, 401, 525, 776, 1311
TscAI CASTG 4 cut(s) 695, 899, 958, 1444
TseFI GTSAC 2 cut(s) 278, 1426
TseI GCWGC 1 cut(s) 245
Tsp45I GTSAC 2 cut(s) 278, 1426
TspDTI ATGAA 6 cut(s) 531, 729, 809, 1100, 1270, 1731
TspRI CASTG 4 cut(s) 695, 899, 958, 1444
VspI ATTAAT 1 cut(s) 525
XapI RAATTY 3 cut(s) 728, 884, 1249
XceI RCATGY 3 cut(s) 704, 859, 1034
XspI CTAG 2 cut(s) 353, 1560
ZrmI AGTACT 1 cut(s) 736
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.