Rh1DG239600

Cyclic nucleotide-gated ion channel 1-like

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1D
Physical Location & Seq
Forward (+)
45466967 .. 45483980
17014 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1DG239600.1

Sequence Viewer

Length: 1251 bp
ATGGCAGTTAACACTAGAGGATACATGTATCATCAAAATCTGGACAACATGAACGACCAGCCAGCCAATGATGCAGTAGCAATTGAAGTACCACGGGAGTTGGAATCTGGAAAGGGAAGCGCAGGACGTAAAAGTACAAGTAGAAAAGGGCTAGAGGAAATTGACGACGATGAGCCAAGACATAGATGGAATACAATCTTTACAATATCATGTGCAATTGCGATCTTCACTGATCCTTTGTACTGTTATGCTCCTGTGATCCGCGTCCGCGAAACATACAAGTGCTTGAAACTGGACCAAACTTTGTTGTGGACGTATATTGGTTTACGATCAGCCGTCGATGTCTTTTATGCAATCGATTTCGTTAGTTGGTGTAAGAAGACAGTTGGGGACTTCTGGACTAGAAGTAGCCGAAACACAGTTCTTGGTTCCAAAGGGGAGAAGAAGGAGCCCGTTAGTTGGTGCATGAAGACATTTGGGACCTTCTGGACTAGAAGTAACCAAAAGACAGAGGTTCTATATCTCATTCTAGTTTCTTTACCCCTTCCAGAGGGACTGATACTATCCGCAAAACGCTCATCATATTGGGATCCTACTTATGCTCTGATAATTTCCACTCCAGTCCAATATTCCTTACGAATTTATCACATCTACGTAACGTTGAAGCGGCGACGTCCTAACCAGACTAGAGTGGGAAAATGGCTAAAAGCTGTATTGGACTACCTTCCGTTCGTCCTTGCTTCTCATCTATTTGGAGCTTTGTGGTACCGTCTTGCTGTTCAACGACTGGTAGATTGTTGGAAGTCACATTGTCACATTCTCCTAGGAGATCCTCAATCTAAAAGAAGTCGACATTTTTTCTGTGGAAATATTACCATACACAACAACAACAATCTCTCTAAATGGGATGAATTATGTCCGGTAAAAGAAGCAAATCCAGATGTCTTTGATTTCGGTATATATATCCACGCTCTTCAATCTAATGCGACAAGTTCAACACATGTCGTGCAAAGAATGTCACAATCTTTTTGGTGGGCCTTACGGAATCTGAGTTCTTTTGGTTCGAACCTCCAGACTAGTCTGTATACAATGGAAATCTTCTTGTCTGTGATGATATCTATAAGTGGCATGGTGTTATTTTTAGTATACCTAAATGCAAGGGTGCAGGTCAGTACTCATCAGCCTCTAATCAGAAATTTTAACTATACTGTATGTGGCATTATGTTCCTGGATTTAATGATGTTGTCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

416

Amino Acids

48.0

Weight (kDa)

9.23

Isoelectric Point (pI)

52.9

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000017)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07351 FvH4_1g11800 FvH4_1g11800 FvH4_1g11800 FvH4_1g11800 FvH4_1g11800 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_4g14360 FvH4_6g13561 FvH4_6g13562 FvH4_6g13580 FvH4_6g13590 FvH4_6g13590 FvH4_6g13590 FvH4_6g13731 FvH4_6g13770 FvH4_6g13800 FvH4_6g13800 FvH4_6g13860 FvH4_6g13870 FvH4_6g13870 FvH4_6g13870 FvH4_6g13870 FvH4_6g13870 FvH4_6g13890 FvH4_6g33801 FvH4_7g13020 FvH4_7g13270 FvH4_7g13270 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g14580 FvH4_7g14580 FvH4_7g14580 FvH4_7g14600 FvH4_7g14600 FvH4_7g20030 FvH4_7g20510 FvH4_7g20510 FvH4_7g20510 FvH4_7g20670 FvH4_7g20670 FvH4_7g20670 FvH4_7g20670 FvH4_7g20690 FvH4_7g20690 FvH4_7g31930 FvH4_7g31930 FvH4_7g31940 FvH4_7g31940
malus_domestica MD01G1115700.v1.1 MD01G1115800.v1.1 MD01G1116600.v1.1 MD01G1116700.v1.1 MD01G1117000.v1.1 MD01G1225000.v1.1 MD02G1077900.v1.1 MD02G1078000.v1.1 MD02G1078200.v1.1 MD02G1078400.v1.1 MD02G1084300.v1.1 MD04G1004700.v1.1 MD04G1123100.v1.1 MD04G1123200.v1.1 MD04G1128000.v1.1 MD04G1128400.v1.1 MD05G1299700.v1.1 MD05G1300000.v1.1 MD07G1184000.v1.1 MD07G1292300.v1.1 MD08G1214800.v1.1
prunus_persica Prupe.1G205100_v2.0.a1 Prupe.1G205100_v2.0.a1 Prupe.1G205200_v2.0.a1 Prupe.2G222300_v2.0.a1 Prupe.2G223300_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223600_v2.0.a1 Prupe.2G223600_v2.0.a1 Prupe.2G223600_v2.0.a1 Prupe.2G223700_v2.0.a1 Prupe.2G223700_v2.0.a1 Prupe.2G223700_v2.0.a1 Prupe.2G223700_v2.0.a1 Prupe.2G223800_v2.0.a1 Prupe.2G223900_v2.0.a1 Prupe.2G224000_v2.0.a1 Prupe.5G162000_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G291000_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G210400_v2.0.a1 Prupe.7G210600_v2.0.a1 Prupe.7G210700_v2.0.a1 Prupe.7G210800_v2.0.a1 Prupe.7G210900_v2.0.a1 Prupe.8G097600_v2.0.a1 Prupe.8G097800_v2.0.a1 Prupe.8G097800_v2.0.a1
pyrus_communis pycom01g14430 pycom01g14440 pycom01g23130 pycom01g23160 pycom01g23330 pycom02g06210 pycom02g06220 pycom02g06250 pycom02g06270 pycom02g06710 pycom03g05360 pycom03g05380 pycom04g11470 pycom04g11480 pycom04g11520 pycom04g11560 pycom04g11600 pycom04g11610 pycom04g11650 pycom04g11660 pycom04g11670 pycom05g27790 pycom07g17630 pycom08g20960 pycom126g00020 pycom126g00030
rosa_chinensis RchiOBHm_Chr1g0318251 RchiOBHm_Chr1g0318731 RchiOBHm_Chr1g0339101 RchiOBHm_Chr1g0339111 RchiOBHm_Chr1g0347151 RchiOBHm_Chr1g0347161 RchiOBHm_Chr1g0347221 RchiOBHm_Chr1g0352401 RchiOBHm_Chr1g0352441 RchiOBHm_Chr1g0352461 RchiOBHm_Chr1g0356131 RchiOBHm_Chr1g0363991 RchiOBHm_Chr1g0364791 RchiOBHm_Chr1g0364801 RchiOBHm_Chr1g0364811 RchiOBHm_Chr1g0364851 RchiOBHm_Chr1g0364951 RchiOBHm_Chr1g0370821 RchiOBHm_Chr1g0381221 RchiOBHm_Chr1g0381231 RchiOBHm_Chr1g0381261 RchiOBHm_Chr1g0381271 RchiOBHm_Chr1g0381341 RchiOBHm_Chr1g0381351 RchiOBHm_Chr1g0381391 RchiOBHm_Chr1g0381801 RchiOBHm_Chr1g0381821 RchiOBHm_Chr2g0093241 RchiOBHm_Chr2g0116391 RchiOBHm_Chr3g0466441 RchiOBHm_Chr3g0466631 RchiOBHm_Chr3g0466651 RchiOBHm_Chr3g0496921 RchiOBHm_Chr4g0400441 RchiOBHm_Chr4g0400501 RchiOBHm_Chr4g0400511 RchiOBHm_Chr4g0400691 RchiOBHm_Chr4g0400701 RchiOBHm_Chr4g0404331 RchiOBHm_Chr5g0052101 RchiOBHm_Chr5g0052111 RchiOBHm_Chr5g0052171 RchiOBHm_Chr5g0052181 RchiOBHm_Chr6g0264161 RchiOBHm_Chr6g0265551 RchiOBHm_Chr7g0213571 RchiOBHm_Chr7g0213581
rosa_laevigata RLG00000002796 RLG00000003261 RLG00000007935 RLG00000007936 RLG00000009187 RLG00000014179 RLG00000016381 RLG00000018265 RLG00000024558 RLG00000024574 RLG00000026232 RLG00000026234 RLG00000026236 RLG00000026237 RLG00000027459 RLG00000027461 RLG00000027463 RLG00000027530 RLG00000028103 RLG00000028304 RLG00000028333 RLG00000029214 RLG00000029848 RLG00000029951 RLG00000030115 RLG00000030552 RLG00000033668 RLG00000034840 RLG00000034841 RLG00000034842 RLG00000035830
rosa_multiflora Rmu_sc0000654.1_g000004 Rmu_sc0000675.1_g000025 Rmu_sc0001075.1_g000002 Rmu_sc0001726.1_g000004 Rmu_sc0001772.1_g000061 Rmu_sc0001772.1_g000065 Rmu_sc0002067.1_g000002 Rmu_sc0002183.1_g000001 Rmu_sc0002183.1_g000006 Rmu_sc0002244.1_g000003 Rmu_sc0002313.1_g000004 Rmu_sc0002319.1_g000004 Rmu_sc0002539.1_g000085 Rmu_sc0002636.1_g000004 Rmu_sc0003229.1_g000007 Rmu_sc0003313.1_g000020 Rmu_sc0003546.1_g000007 Rmu_sc0003724.1_g000015 Rmu_sc0003936.1_g000029 Rmu_sc0004191.1_g000067 Rmu_sc0004525.1_g000012 Rmu_sc0005122.1_g000009 Rmu_sc0005255.1_g000040 Rmu_sc0005338.1_g000016 Rmu_sc0005584.1_g000008 Rmu_sc0006460.1_g000013 Rmu_sc0006872.1_g000011 Rmu_sc0006872.1_g000015 Rmu_sc0006872.1_g000016 Rmu_sc0006952.1_g000013 Rmu_sc0007342.1_g000005 Rmu_sc0007342.1_g000006 Rmu_sc0008418.1_g000003 Rmu_sc0008418.1_g000006 Rmu_sc0008636.1_g000007 Rmu_sc0008636.1_g000008 Rmu_sc0009205.1_g000014 Rmu_sc0009365.1_g000014 Rmu_sc0009917.1_g000002 Rmu_sc0019289.1_g000003 Rmu_ssc0000098.1_g000011 Rmu_ssc0000098.1_g000012 Rmu_ssc0000167.1_g000018 Rmu_ssc0000167.1_g000024 Rmu_ssc0000326.1_g000015
rosa_roxburghii Rroxscaffold_166G00440780 Rroxscaffold_176G00431500 Rroxscaffold_1G00015080 Rroxscaffold_1G00027880 Rroxscaffold_1G00027890 Rroxscaffold_1G00027920 Rroxscaffold_2G00127250 Rroxscaffold_2G00148380 Rroxscaffold_3G00219450 Rroxscaffold_3G00232170 Rroxscaffold_3G00232210 Rroxscaffold_3G00242230 Rroxscaffold_3G00242240 Rroxscaffold_3G00244790 Rroxscaffold_3G00245790 Rroxscaffold_4G00278400 Rroxscaffold_4G00278430 Rroxscaffold_4G00278670 Rroxscaffold_4G00278680 Rroxscaffold_4G00278690 Rroxscaffold_4G00278700 Rroxscaffold_4G00278720 Rroxscaffold_4G00291690 Rroxscaffold_4G00292070 Rroxscaffold_4G00292090 Rroxscaffold_4G00292770 Rroxscaffold_4G00302240 Rroxscaffold_4G00302860 Rroxscaffold_4G00311320 Rroxscaffold_4G00311330 Rroxscaffold_4G00320570 Rroxscaffold_4G00322050 Rroxscaffold_4G00329480 Rroxscaffold_4G00329730 Rroxscaffold_5G00345500 Rroxscaffold_5G00345510 Rroxscaffold_5G00360830 Rroxscaffold_5G00360840 Rroxscaffold_6G00393450 Rroxscaffold_6G00404030 Rroxscaffold_6G00414220 Rroxscaffold_6G00414230 Rroxscaffold_6G00414280 Rroxscaffold_6G00414290 Rroxscaffold_6G00414350 Rroxscaffold_6G00414470 Rroxscaffold_7G00202570 Rroxscaffold_7G00203460 Rroxscaffold_7G00203470
rosa_rugosa Rorug01G0020500 Rorug01G0020600 Rorug01G0020700 Rorug01G0143700.1 Rorug01G0225700 Rorug01G0228500 Rorug01G0228600 Rorug01G0228600 Rorug01G0228700 Rorug01G0228800 Rorug01G0228800 Rorug01G0229000 Rorug01G0229300 Rorug01G0229400 Rorug01G0229600 Rorug01G0229700 Rorug01G0232200 Rorug01G0232600 Rorug01G0232600 Rorug01G0311900 Rorug01G0311900 Rorug01G0318400 Rorug01G0318500 Rorug01G0318500 Rorug01G0318500 Rorug01G0427900 Rorug01G0427900 Rorug01G0428000 Rorug01G0428200 Rorug01G0428300 Rorug01G0428400 Rorug01G0431500 Rorug01G0431600 Rorug01G0431600 Rorug02G0033800 Rorug02G0206300 Rorug03G0081900 Rorug03G0083200 Rorug03G0083200 Rorug03G0083300 Rorug04G0025100 Rorug04G0025100 Rorug04G0025200 Rorug04G0025300 Rorug04G0058600 Rorug04G0058700 Rorug04G0058800 Rorug04G0098400 Rorug04G0098500 Rorug05G0274500 Rorug05G0274600 Rorug05G0274800 Rorug06G0008500 Rorug06G0009100 Rorug06G0018000
rosa_samantha Rh1AG031700 Rh1AG036100 Rh1AG089800 Rh1AG239800 Rh1AG239900 Rh1AG242000 Rh1AG242300 Rh1AG245600 Rh1AG262600 Rh1AG319700 Rh1AG319800 Rh1AG319900 Rh1AG327200 Rh1AG451100 Rh1AG451200 Rh1AG451300 Rh1AG451600 Rh1AG451700 Rh1BG027200 Rh1BG071600 Rh1BG090700 Rh1BG211000 Rh1BG213000 Rh1BG213500 Rh1BG282800 Rh1BG288400 Rh1BG408100 Rh1BG408200 Rh1BG408400 Rh1BG408700 Rh1CG026300 Rh1CG028300 Rh1CG224100 Rh1CG226000 Rh1CG226100 Rh1CG229300 Rh1CG229400 Rh1CG245900 Rh1CG299200 Rh1CG299400 Rh1CG299500 Rh1CG303300 Rh1CG305100 Rh1CG422500 Rh1CG422600 Rh1CG422700 Rh1CG422800 Rh1CG422900 Rh1CG423100 Rh1CG423300 Rh1CG423400 Rh1CG426300 Rh1CG426600 Rh1DG239300 Rh1DG239600 Rh1DG258300 Rh1DG314200 Rh1DG314300 Rh1DG314400 Rh1DG320000 Rh1DG439200 Rh1DG439400 Rh1DG439500 Rh1DG439700 Rh1DG440000 Rh1DG443800 Rh2AG261800 Rh2BG080900 Rh2CG083300 Rh2DG078900 Rh2DG270000 Rh2DG270100 Rh3AG128400 Rh3AG130100 Rh3AG130500 Rh3AG332500 Rh3AG332600 Rh3AG332800 Rh3BG149700 Rh3BG151500 Rh3CG151400 Rh3CG354500 Rh3CG366800 Rh3DG150500 Rh3DG152200 Rh4AG101400 Rh4AG102900 Rh4AG148300 Rh4AG148600 Rh4BG098000 Rh4CG111100 Rh4CG111300 Rh4CG155100 Rh4DG094800 Rh5AG213600 Rh5AG346900 Rh5AG347000 Rh5BG357500 Rh5BG357700 Rh5BG485400 Rh5CG383100 Rh5CG383200 Rh5CG383300 Rh5CG509900 Rh5DG373000 Rh5DG373200 Rh6BG054300 Rh6BG126300 Rh6CG125100 Rh6CG185300 Rh6DG177000 Rh7AG276100 Rh7AG276200 Rh7BG230500 Rh7BG270500 Rh7BG364000 Rh7CG250100 Rh7CG295200 Rh7CG295300 Rh7DG389700
rosa_wichuraiana Rw0G001190 Rw0G010680 Rw0G013360 Rw0G014310 Rw0G014890 Rw0G020310 Rw0G021350 Rw0G022510 Rw1G003360 Rw1G004330 Rw1G006930 Rw1G008310 Rw1G021090 Rw1G021150 Rw1G021210 Rw1G023200 Rw1G023210 Rw1G028340 Rw1G028350 Rw1G028990 Rw1G032510 Rw1G039370 Rw1G039400 Rw1G039410 Rw1G039420 Rw1G039430 Rw2G006700 Rw2G020550 Rw2G020580 Rw3G012130 Rw3G012300 Rw3G012310 Rw3G028220 Rw3G029230 Rw5G021600 Rw5G032790 Rw6G011240 Rw7G027670 Rw7G032780

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 676
Acc36I ACCTGC 1 cut(s) 1156
Acc65I GGTACC 1 cut(s) 765
AccB1I GGYRCC 1 cut(s) 765
AccI GTMKAC 3 cut(s) 850, 1085, 1146
AccII CGCG 2 cut(s) 264, 270
AciI CCGC 4 cut(s) 262, 268, 567, 667
AclI AACGTT 1 cut(s) 659
AclWI GGATC 5 cut(s) 227, 253, 584, 597, 824
AcsI RAATTY 2 cut(s) 639, 1195
AcyI GRCGYC 1 cut(s) 673
AfaI GTAC 5 cut(s) 90, 136, 242, 767, 1174
AfiI CCNNNNNNNGG 2 cut(s) 459, 550
AflIII ACRYGT 2 cut(s) 24, 1000
AgsI TTSAA 6 cut(s) 86, 289, 664, 782, 977, 996
AhlI ACTAGT 1 cut(s) 1076
AjnI CCWGG 1 cut(s) 1227
AloI GAACNNNNNNTCC 2 cut(s) 1036, 1068
AluBI AGCT 2 cut(s) 710, 758
AluI AGCT 2 cut(s) 710, 758
AlwI GGATC 5 cut(s) 227, 253, 584, 597, 824
AoxI GGCC 1 cut(s) 1035
ApoI RAATTY 2 cut(s) 639, 1195
Asp718I GGTACC 1 cut(s) 765
AspA2I CCTAGG 1 cut(s) 823
AspLEI GCGC 1 cut(s) 122
AspS9I GGNCC 3 cut(s) 295, 480, 1035
AsuII TTCGAA 1 cut(s) 1064
AvaII GGWCC 2 cut(s) 295, 480
AvrII CCTAGG 1 cut(s) 823
BamHI GGATCC 1 cut(s) 589
BanI GGYRCC 1 cut(s) 765
BanII GRGCYC 1 cut(s) 453
BbsI GAAGAC 2 cut(s) 386, 476
BccI CCATC 1 cut(s) 180
BceAI ACGGC 1 cut(s) 320
BciT130I CCWGG 1 cut(s) 1229
BciVI GTATCC 1 cut(s) 14
BcuI ACTAGT 1 cut(s) 1076
BfaI CTAG 8 cut(s) 15, 152, 402, 492, 530, 687, 824, 1077
BfuAI ACCTGC 1 cut(s) 1156
BfuI GTATCC 1 cut(s) 14
BisI GCNGC 1 cut(s) 668
BlnI CCTAGG 1 cut(s) 823
BlsI GCNGC 1 cut(s) 669
BmcAI AGTACT 1 cut(s) 1174
Bme1390I CCNGG 1 cut(s) 1229
Bme18I GGWCC 2 cut(s) 295, 480
BmgT120I GGNCC 3 cut(s) 295, 480, 1035
BmiI GGNNCC 5 cut(s) 430, 450, 481, 591, 767
BmrFI CCNGG 1 cut(s) 1229
BmsI GCATC 1 cut(s) 61
BpiI GAAGAC 2 cut(s) 386, 476
BpmI CTGGAG 2 cut(s) 603, 1055
Bpu14I TTCGAA 1 cut(s) 1064
Bsa29I ATCGAT 1 cut(s) 357
BsaAI YACGTR 1 cut(s) 655
BsaHI GRCGYC 1 cut(s) 673
BsaJI CCNNGG 2 cut(s) 92, 823
BsaWI WCCGGW 1 cut(s) 919
Bsc4I CCNNNNNNNGG 2 cut(s) 459, 550
Bse1I ACTGG 3 cut(s) 297, 620, 792
BseBI CCWGG 1 cut(s) 1229
BseCI ATCGAT 1 cut(s) 357
BseDI CCNNGG 2 cut(s) 92, 823
BseGI GGATG 1 cut(s) 913
BseLI CCNNNNNNNGG 2 cut(s) 459, 550
BseMII CTCAG 1 cut(s) 1040
BseNI ACTGG 3 cut(s) 297, 620, 792
BsgI GTGCAG 1 cut(s) 1184
Bsh1236I CGCG 2 cut(s) 264, 270
BshFI GGCC 1 cut(s) 1037
BshNI GGYRCC 1 cut(s) 765
BshVI ATCGAT 1 cut(s) 357
BsiSI CCGG 1 cut(s) 920
BslFI GGGAC 3 cut(s) 404, 493, 567
BslI CCNNNNNNNGG 2 cut(s) 459, 550
BsmFI GGGAC 3 cut(s) 404, 493, 567
BsnI GGCC 1 cut(s) 1037
Bsp119I TTCGAA 1 cut(s) 1064
Bsp1286I GDGCHC 1 cut(s) 453
Bsp143I GATC 6 cut(s) 222, 232, 258, 329, 589, 829
BspACI CCGC 4 cut(s) 262, 268, 567, 667
BspANI GGCC 1 cut(s) 1037
BspCNI CTCAG 1 cut(s) 1041
BspDI ATCGAT 1 cut(s) 357
BspFNI CGCG 2 cut(s) 264, 270
BspLI GGNNCC 5 cut(s) 430, 450, 481, 591, 767
BspMI ACCTGC 1 cut(s) 1156
BspPI GGATC 5 cut(s) 227, 253, 584, 597, 824
BspQI GCTCTTC 1 cut(s) 978
BspT104I TTCGAA 1 cut(s) 1064
BspT107I GGYRCC 1 cut(s) 765
BsrI ACTGG 3 cut(s) 297, 620, 792
BssECI CCNNGG 2 cut(s) 92, 823
BssMI GATC 6 cut(s) 222, 232, 258, 329, 589, 829
BssNAI GTATAC 2 cut(s) 1086, 1147
BssNI GRCGYC 1 cut(s) 673
BssT1I CCWWGG 1 cut(s) 823
Bst1107I GTATAC 2 cut(s) 1086, 1147
Bst2UI CCWGG 1 cut(s) 1229
Bst4CI ACNGT 5 cut(s) 245, 385, 421, 770, 1210
Bst6I CTCTTC 1 cut(s) 978
BstACI GRCGYC 1 cut(s) 673
BstBAI YACGTR 1 cut(s) 655
BstBI TTCGAA 1 cut(s) 1064
BstC8I GCNNGC 1 cut(s) 63
BstDEI CTNAG 1 cut(s) 1049
BstDSI CCRYGG 1 cut(s) 92
BstENI CCTNNNNNAGG 1 cut(s) 548
BstF5I GGATG 1 cut(s) 913
BstFNI CGCG 2 cut(s) 264, 270
BstHHI GCGC 1 cut(s) 122
BstKTI GATC 6 cut(s) 225, 235, 261, 332, 592, 832
BstMBI GATC 6 cut(s) 222, 232, 258, 329, 589, 829
BstMWI GCNNNNNNNGC 1 cut(s) 71
BstNI CCWGG 1 cut(s) 1229
BstNSI RCATGY 2 cut(s) 28, 1004
BstSCI CCNGG 1 cut(s) 1227
BstSNI TACGTA 1 cut(s) 655
BstUI CGCG 2 cut(s) 264, 270
BstV2I GAAGAC 2 cut(s) 386, 476
BstX2I RGATCY 2 cut(s) 589, 829
BstYI RGATCY 2 cut(s) 589, 829
BstZ17I GTATAC 2 cut(s) 1086, 1147
Bsu15I ATCGAT 1 cut(s) 357
BsuI GTATCC 1 cut(s) 14
BsuRI GGCC 1 cut(s) 1037
BsuTUI ATCGAT 1 cut(s) 357
BtgI CCRYGG 1 cut(s) 92
BtsCI GGATG 1 cut(s) 913
BtsIMutI CAGTG 1 cut(s) 228
BveI ACCTGC 1 cut(s) 1156
Cac8I GCNNGC 1 cut(s) 63
CfoI GCGC 1 cut(s) 122
Cfr13I GGNCC 3 cut(s) 295, 480, 1035
ClaI ATCGAT 1 cut(s) 357
CseI GACGC 1 cut(s) 253
Csp6I GTAC 5 cut(s) 89, 135, 241, 766, 1173
CspCI CAANNNNNGTGG 2 cut(s) 81, 116
CviAII CATG 6 cut(s) 25, 49, 210, 466, 1001, 1129
CviQI GTAC 5 cut(s) 89, 135, 241, 766, 1173
DdeI CTNAG 1 cut(s) 1049
DpnI GATC 6 cut(s) 224, 234, 260, 331, 591, 831
DpnII GATC 6 cut(s) 222, 232, 258, 329, 589, 829
Eam1104I CTCTTC 1 cut(s) 978
EarI CTCTTC 1 cut(s) 978
Eco105I TACGTA 1 cut(s) 655
Eco130I CCWWGG 1 cut(s) 823
Eco24I GRGCYC 1 cut(s) 453
Eco32I GATATC 1 cut(s) 1116
Eco47I GGWCC 2 cut(s) 295, 480
EcoNI CCTNNNNNAGG 1 cut(s) 548
EcoO109I RGGNCCY 1 cut(s) 480
EcoRII CCWGG 1 cut(s) 1227
EcoRV GATATC 1 cut(s) 1116
EcoT14I CCWWGG 1 cut(s) 823
EcoT38I GRGCYC 1 cut(s) 453
ErhI CCWWGG 1 cut(s) 823
FaeI CATG 6 cut(s) 28, 52, 213, 469, 1004, 1132
FaqI GGGAC 3 cut(s) 404, 493, 567
FatI CATG 6 cut(s) 24, 48, 209, 465, 1000, 1128
FblI GTMKAC 3 cut(s) 850, 1085, 1146
Fnu4HI GCNGC 1 cut(s) 668
FokI GGATG 1 cut(s) 920
FriOI GRGCYC 1 cut(s) 453
Fsp4HI GCNGC 1 cut(s) 668
FspBI CTAG 8 cut(s) 15, 152, 402, 492, 530, 687, 824, 1077
GlaI GCGC 1 cut(s) 121
GluI GCNGC 1 cut(s) 668
GsuI CTGGAG 2 cut(s) 603, 1055
HaeIII GGCC 1 cut(s) 1037
HapII CCGG 1 cut(s) 920
HgaI GACGC 1 cut(s) 253
HhaI GCGC 1 cut(s) 122
Hin1I GRCGYC 1 cut(s) 673
Hin1II CATG 6 cut(s) 28, 52, 213, 469, 1004, 1132
Hin6I GCGC 1 cut(s) 120
HinP1I GCGC 1 cut(s) 120
HincII GTYRAC 2 cut(s) 10, 851
HindII GTYRAC 2 cut(s) 10, 851
HinfI GANTC 2 cut(s) 104, 1045
HpaI GTTAAC 1 cut(s) 10
HpaII CCGG 1 cut(s) 920
Hpy166II GTNNAC 6 cut(s) 10, 312, 326, 851, 1086, 1147
Hpy188I TCNGA 3 cut(s) 606, 1050, 1193
Hpy188III TCNNGA 7 cut(s) 41, 108, 397, 487, 548, 938, 1072
Hpy8I GTNNAC 6 cut(s) 10, 312, 326, 851, 1086, 1147
Hpy99I CGWCG 3 cut(s) 170, 341, 675
HpyAV CCTTC 4 cut(s) 439, 493, 554, 734
HpyCH4III ACNGT 5 cut(s) 245, 385, 421, 770, 1210
HpyCH4IV ACGT 5 cut(s) 127, 314, 654, 659, 673
HpyCH4V TGCA 7 cut(s) 74, 215, 353, 465, 1009, 1157, 1165
HpyF10VI GCNNNNNNNGC 1 cut(s) 71
HpyF3I CTNAG 1 cut(s) 1049
HpySE526I ACGT 5 cut(s) 127, 314, 654, 659, 673
Hsp92I GRCGYC 1 cut(s) 673
Hsp92II CATG 6 cut(s) 28, 52, 213, 469, 1004, 1132
HspAI GCGC 1 cut(s) 120
KpnI GGTACC 1 cut(s) 769
KspAI GTTAAC 1 cut(s) 10
Kzo9I GATC 6 cut(s) 222, 232, 258, 329, 589, 829
LguI GCTCTTC 1 cut(s) 978
LmnI GCTCC 3 cut(s) 256, 448, 755
LweI GCATC 1 cut(s) 61
MaeI CTAG 8 cut(s) 15, 152, 402, 492, 530, 687, 824, 1077
MaeII ACGT 5 cut(s) 127, 314, 654, 659, 673
MaeIII GTNAC 5 cut(s) 497, 655, 804, 812, 1017
MalI GATC 6 cut(s) 224, 234, 260, 331, 591, 831
MboI GATC 6 cut(s) 222, 232, 258, 329, 589, 829
MboII GAAGA 6 cut(s) 217, 391, 454, 481, 965, 1090
MfeI CAATTG 2 cut(s) 81, 216
MflI RGATCY 2 cut(s) 589, 829
MhlI GDGCHC 1 cut(s) 453
MluCI AATT 7 cut(s) 81, 159, 216, 609, 639, 911, 1195
MmeI TCCRAC 2 cut(s) 81, 779
MnlI CCTC 7 cut(s) 11, 148, 505, 544, 843, 1079, 1194
MseI TTAA 3 cut(s) 9, 1200, 1235
MslI CAYNNNNRTG 1 cut(s) 280
MspI CCGG 1 cut(s) 920
MspR9I CCNGG 1 cut(s) 1229
MunI CAATTG 2 cut(s) 81, 216
MvaI CCWGG 1 cut(s) 1229
MvnI CGCG 2 cut(s) 264, 270
MwoI GCNNNNNNNGC 1 cut(s) 71
NdeII GATC 6 cut(s) 222, 232, 258, 329, 589, 829
NlaIII CATG 6 cut(s) 28, 52, 213, 469, 1004, 1132
NlaIV GGNNCC 5 cut(s) 430, 450, 481, 591, 767
NmuCI GTSAC 3 cut(s) 804, 812, 1017
NspI RCATGY 2 cut(s) 28, 1004
NspV TTCGAA 1 cut(s) 1064
PciI ACATGT 2 cut(s) 24, 1000
PciSI GCTCTTC 1 cut(s) 978
PfeI GAWTC 2 cut(s) 104, 1045
PfoI TCCNGGA 1 cut(s) 1227
PkrI GCNGC 1 cut(s) 669
Ppu21I YACGTR 1 cut(s) 655
PpuMI RGGWCCY 1 cut(s) 480
PscI ACATGT 2 cut(s) 24, 1000
Psp1406I AACGTT 1 cut(s) 659
Psp5II RGGWCCY 1 cut(s) 480
Psp6I CCWGG 1 cut(s) 1227
PspGI CCWGG 1 cut(s) 1227
PspN4I GGNNCC 5 cut(s) 430, 450, 481, 591, 767
PspPI GGNCC 3 cut(s) 295, 480, 1035
PspPPI RGGWCCY 1 cut(s) 480
PsuI RGATCY 2 cut(s) 589, 829
RsaI GTAC 5 cut(s) 90, 136, 242, 767, 1174
RsaNI GTAC 5 cut(s) 89, 135, 241, 766, 1173
RseI CAYNNNNRTG 1 cut(s) 280
SalI GTCGAC 1 cut(s) 849
SapI GCTCTTC 1 cut(s) 978
SaqAI TTAA 3 cut(s) 9, 1200, 1235
SatI GCNGC 1 cut(s) 668
Sau3AI GATC 6 cut(s) 222, 232, 258, 329, 589, 829
Sau96I GGNCC 3 cut(s) 295, 480, 1035
ScaI AGTACT 1 cut(s) 1174
ScrFI CCNGG 1 cut(s) 1229
SduI GDGCHC 1 cut(s) 453
SfaNI GCATC 1 cut(s) 61
SfuI TTCGAA 1 cut(s) 1064
SinI GGWCC 2 cut(s) 295, 480
SmiMI CAYNNNNRTG 1 cut(s) 280
SnaBI TACGTA 1 cut(s) 655
SpeI ACTAGT 1 cut(s) 1076
Sse9I AATT 7 cut(s) 81, 159, 216, 609, 639, 911, 1195
SsiI CCGC 4 cut(s) 262, 268, 567, 667
SspI AATATT 2 cut(s) 629, 871
SspMI CTAG 8 cut(s) 15, 152, 402, 492, 530, 687, 824, 1077
StyD4I CCNGG 1 cut(s) 1227
StyI CCWWGG 1 cut(s) 823
TaaI ACNGT 5 cut(s) 245, 385, 421, 770, 1210
TaiI ACGT 5 cut(s) 130, 317, 657, 662, 676
TaqI TCGA 4 cut(s) 339, 357, 850, 1064
TasI AATT 7 cut(s) 81, 159, 216, 609, 639, 911, 1195
TatI WGTACW 3 cut(s) 134, 240, 1172
TauI GCSGC 1 cut(s) 670
TfiI GAWTC 2 cut(s) 104, 1045
Tru1I TTAA 3 cut(s) 9, 1200, 1235
Tru9I TTAA 3 cut(s) 9, 1200, 1235
TscAI CASTG 1 cut(s) 235
TseFI GTSAC 3 cut(s) 804, 812, 1017
Tsp45I GTSAC 3 cut(s) 804, 812, 1017
TspDTI ATGAA 3 cut(s) 65, 482, 924
TspGWI ACGGA 2 cut(s) 717, 1057
TspRI CASTG 1 cut(s) 235
VpaK11BI GGWCC 2 cut(s) 295, 480
XagI CCTNNNNNAGG 1 cut(s) 548
XapI RAATTY 2 cut(s) 639, 1195
XceI RCATGY 2 cut(s) 28, 1004
XcmI CCANNNNNNNNNTGG 1 cut(s) 183
XmaJI CCTAGG 1 cut(s) 823
XmiI GTMKAC 3 cut(s) 850, 1085, 1146
XspI CTAG 8 cut(s) 15, 152, 402, 492, 530, 687, 824, 1077
ZraI GACGTC 1 cut(s) 674
ZrmI AGTACT 1 cut(s) 1174
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.