Cyclic nucleotide-gated ion channel 1-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Ion_trans | PF00520 | 58 - 289 | 1.1e-07 | Ion transport protein |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 877 |
| AccII | CGCG | 1 cut(s) | 823 |
| AclWI | GGATC | 1 cut(s) | 218 |
| AcsI | RAATTY | 3 cut(s) | 162, 365, 410 |
| AfaI | GTAC | 2 cut(s) | 153, 879 |
| AhlI | ACTAGT | 1 cut(s) | 695 |
| AjiI | CACGTC | 1 cut(s) | 378 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 401, 433 |
| AluBI | AGCT | 5 cut(s) | 77, 662, 749, 943, 967 |
| AluI | AGCT | 5 cut(s) | 77, 662, 749, 943, 967 |
| AlwI | GGATC | 1 cut(s) | 218 |
| AoxI | GGCC | 1 cut(s) | 99 |
| ApeKI | GCWGC | 3 cut(s) | 662, 902, 905 |
| ApoI | RAATTY | 3 cut(s) | 162, 365, 410 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 335, 367 |
| AspLEI | GCGC | 2 cut(s) | 823, 825 |
| AspS9I | GGNCC | 2 cut(s) | 171, 280 |
| AsuHPI | GGTGA | 1 cut(s) | 331 |
| AvaII | GGWCC | 2 cut(s) | 171, 280 |
| BaeGI | GKGCMC | 1 cut(s) | 120 |
| BbvI | GCAGC | 3 cut(s) | 649, 889, 892 |
| BccI | CCATC | 1 cut(s) | 547 |
| BceAI | ACGGC | 1 cut(s) | 86 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 448, 458, 482, 492 |
| BclI | TGATCA | 1 cut(s) | 843 |
| BcuI | ACTAGT | 1 cut(s) | 695 |
| BfaI | CTAG | 4 cut(s) | 62, 627, 696, 707 |
| BfuAI | ACCTGC | 1 cut(s) | 877 |
| BglII | AGATCT | 1 cut(s) | 539 |
| BisI | GCNGC | 3 cut(s) | 663, 903, 906 |
| BlsI | GCNGC | 3 cut(s) | 664, 904, 907 |
| BmcAI | AGTACT | 1 cut(s) | 153 |
| Bme18I | GGWCC | 2 cut(s) | 171, 280 |
| BmgBI | CACGTC | 1 cut(s) | 378 |
| BmgT120I | GGNCC | 2 cut(s) | 171, 280 |
| BmiI | GGNNCC | 1 cut(s) | 712 |
| BmsI | GCATC | 1 cut(s) | 468 |
| BpmI | CTGGAG | 1 cut(s) | 36 |
| Bsa29I | ATCGAT | 1 cut(s) | 24 |
| BsaJI | CCNNGG | 3 cut(s) | 83, 102, 167 |
| Bse1I | ACTGG | 3 cut(s) | 53, 149, 345 |
| BseCI | ATCGAT | 1 cut(s) | 24 |
| BseDI | CCNNGG | 3 cut(s) | 83, 102, 167 |
| BseGI | GGATG | 3 cut(s) | 558, 747, 770 |
| BseMII | CTCAG | 6 cut(s) | 44, 866, 930, 954, 1001, 1024 |
| BseNI | ACTGG | 3 cut(s) | 53, 149, 345 |
| BsePI | GCGCGC | 1 cut(s) | 821 |
| BseRI | GAGGAG | 1 cut(s) | 122 |
| BseSI | GKGCMC | 1 cut(s) | 120 |
| BseXI | GCAGC | 3 cut(s) | 649, 889, 892 |
| BsgI | GTGCAG | 2 cut(s) | 963, 1048 |
| Bsh1236I | CGCG | 1 cut(s) | 823 |
| BshFI | GGCC | 1 cut(s) | 101 |
| BshVI | ATCGAT | 1 cut(s) | 24 |
| BslFI | GGGAC | 2 cut(s) | 546, 961 |
| BsmFI | GGGAC | 2 cut(s) | 546, 961 |
| BsmI | GAATGC | 1 cut(s) | 958 |
| BsnI | GGCC | 1 cut(s) | 101 |
| Bsp1286I | GDGCHC | 1 cut(s) | 120 |
| Bsp143I | GATC | 4 cut(s) | 223, 325, 539, 843 |
| Bsp19I | CCATGG | 2 cut(s) | 83, 167 |
| BspANI | GGCC | 1 cut(s) | 101 |
| BspCNI | CTCAG | 6 cut(s) | 43, 865, 931, 955, 1000, 1023 |
| BspDI | ATCGAT | 1 cut(s) | 24 |
| BspFNI | CGCG | 1 cut(s) | 823 |
| BspLI | GGNNCC | 1 cut(s) | 712 |
| BspMI | ACCTGC | 1 cut(s) | 877 |
| BspPI | GGATC | 1 cut(s) | 218 |
| BsrI | ACTGG | 3 cut(s) | 53, 149, 345 |
| BssECI | CCNNGG | 3 cut(s) | 83, 102, 167 |
| BssHII | GCGCGC | 1 cut(s) | 821 |
| BssMI | GATC | 4 cut(s) | 223, 325, 539, 843 |
| BssT1I | CCWWGG | 2 cut(s) | 83, 167 |
| Bst4CI | ACNGT | 3 cut(s) | 38, 818, 868 |
| Bst6I | CTCTTC | 3 cut(s) | 9, 924, 1005 |
| BstC8I | GCNNGC | 1 cut(s) | 823 |
| BstDEI | CTNAG | 7 cut(s) | 30, 536, 852, 939, 963, 987, 1010 |
| BstDSI | CCRYGG | 3 cut(s) | 83, 102, 167 |
| BstF5I | GGATG | 3 cut(s) | 558, 747, 770 |
| BstFNI | CGCG | 1 cut(s) | 823 |
| BstHHI | GCGC | 2 cut(s) | 823, 825 |
| BstKTI | GATC | 4 cut(s) | 226, 328, 542, 846 |
| BstMBI | GATC | 4 cut(s) | 223, 325, 539, 843 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 964 |
| BstSLI | GKGCMC | 1 cut(s) | 120 |
| BstUI | CGCG | 1 cut(s) | 823 |
| BstV1I | GCAGC | 3 cut(s) | 649, 889, 892 |
| BstX2I | RGATCY | 2 cut(s) | 223, 539 |
| BstYI | RGATCY | 2 cut(s) | 223, 539 |
| Bsu15I | ATCGAT | 1 cut(s) | 24 |
| BsuRI | GGCC | 1 cut(s) | 101 |
| BsuTUI | ATCGAT | 1 cut(s) | 24 |
| BtgI | CCRYGG | 3 cut(s) | 83, 102, 167 |
| BtrI | CACGTC | 1 cut(s) | 378 |
| BtsCI | GGATG | 3 cut(s) | 558, 747, 770 |
| BtsIMutI | CAGTG | 2 cut(s) | 823, 860 |
| BveI | ACCTGC | 1 cut(s) | 877 |
| Cac8I | GCNNGC | 1 cut(s) | 823 |
| CfoI | GCGC | 2 cut(s) | 823, 825 |
| Cfr13I | GGNCC | 2 cut(s) | 171, 280 |
| ClaI | ATCGAT | 1 cut(s) | 24 |
| Csp6I | GTAC | 2 cut(s) | 152, 878 |
| CviAII | CATG | 4 cut(s) | 84, 168, 201, 971 |
| CviJI | RGCY | 8 cut(s) | 77, 101, 437, 662, 713, 749, 943, 967 |
| CviKI_1 | RGCY | 8 cut(s) | 77, 101, 437, 662, 713, 749, 943, 967 |
| CviQI | GTAC | 2 cut(s) | 152, 878 |
| DdeI | CTNAG | 7 cut(s) | 30, 536, 852, 939, 963, 987, 1010 |
| DpnI | GATC | 4 cut(s) | 225, 327, 541, 845 |
| DpnII | GATC | 4 cut(s) | 223, 325, 539, 843 |
| Eam1104I | CTCTTC | 3 cut(s) | 9, 924, 1005 |
| EarI | CTCTTC | 3 cut(s) | 9, 924, 1005 |
| Eco130I | CCWWGG | 2 cut(s) | 83, 167 |
| Eco32I | GATATC | 1 cut(s) | 22 |
| Eco47I | GGWCC | 2 cut(s) | 171, 280 |
| EcoRV | GATATC | 1 cut(s) | 22 |
| EcoT14I | CCWWGG | 2 cut(s) | 83, 167 |
| EcoT22I | ATGCAT | 1 cut(s) | 461 |
| ErhI | CCWWGG | 2 cut(s) | 83, 167 |
| FaeI | CATG | 4 cut(s) | 87, 171, 204, 974 |
| FaqI | GGGAC | 2 cut(s) | 546, 961 |
| FatI | CATG | 4 cut(s) | 83, 167, 200, 970 |
| FauNDI | CATATG | 1 cut(s) | 176 |
| FbaI | TGATCA | 1 cut(s) | 843 |
| Fnu4HI | GCNGC | 3 cut(s) | 663, 903, 906 |
| FokI | GGATG | 3 cut(s) | 565, 754, 777 |
| Fsp4HI | GCNGC | 3 cut(s) | 663, 903, 906 |
| FspBI | CTAG | 4 cut(s) | 62, 627, 696, 707 |
| GlaI | GCGC | 2 cut(s) | 822, 824 |
| GluI | GCNGC | 3 cut(s) | 663, 903, 906 |
| GsuI | CTGGAG | 1 cut(s) | 36 |
| HaeIII | GGCC | 1 cut(s) | 101 |
| HhaI | GCGC | 2 cut(s) | 823, 825 |
| Hin1II | CATG | 4 cut(s) | 87, 171, 204, 974 |
| Hin6I | GCGC | 2 cut(s) | 821, 823 |
| HinP1I | GCGC | 2 cut(s) | 821, 823 |
| HindIII | AAGCTT | 1 cut(s) | 75 |
| HinfI | GANTC | 5 cut(s) | 26, 131, 297, 895, 949 |
| HphI | GGTGA | 1 cut(s) | 331 |
| Hpy188I | TCNGA | 7 cut(s) | 33, 91, 223, 408, 570, 940, 964 |
| Hpy188III | TCNNGA | 1 cut(s) | 841 |
| Hpy99I | CGWCG | 1 cut(s) | 251 |
| HpyAV | CCTTC | 3 cut(s) | 286, 1005, 1028 |
| HpyCH4III | ACNGT | 3 cut(s) | 38, 818, 868 |
| HpyCH4IV | ACGT | 2 cut(s) | 345, 377 |
| HpyCH4V | TGCA | 7 cut(s) | 275, 459, 786, 958, 980, 1041, 1065 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 964 |
| HpyF3I | CTNAG | 7 cut(s) | 30, 536, 852, 939, 963, 987, 1010 |
| HpySE526I | ACGT | 2 cut(s) | 345, 377 |
| Hsp92II | CATG | 4 cut(s) | 87, 171, 204, 974 |
| HspAI | GCGC | 2 cut(s) | 821, 823 |
| Ksp22I | TGATCA | 1 cut(s) | 843 |
| Kzo9I | GATC | 4 cut(s) | 223, 325, 539, 843 |
| LmnI | GCTCC | 2 cut(s) | 710, 979 |
| Lsp1109I | GCAGC | 3 cut(s) | 649, 889, 892 |
| LweI | GCATC | 1 cut(s) | 468 |
| MaeI | CTAG | 4 cut(s) | 62, 627, 696, 707 |
| MaeII | ACGT | 2 cut(s) | 345, 377 |
| MaeIII | GTNAC | 3 cut(s) | 193, 319, 862 |
| MalI | GATC | 4 cut(s) | 225, 327, 541, 845 |
| MboI | GATC | 4 cut(s) | 223, 325, 539, 843 |
| MboII | GAAGA | 6 cut(s) | 26, 226, 534, 590, 911, 992 |
| MfeI | CAATTG | 1 cut(s) | 416 |
| MflI | RGATCY | 2 cut(s) | 223, 539 |
| MhlI | GDGCHC | 1 cut(s) | 120 |
| MluCI | AATT | 8 cut(s) | 162, 207, 365, 410, 416, 483, 489, 673 |
| MlyI | GAGTC | 3 cut(s) | 140, 306, 943 |
| MnlI | CCTC | 6 cut(s) | 10, 60, 91, 100, 103, 543 |
| Mph1103I | ATGCAT | 1 cut(s) | 461 |
| MseI | TTAA | 1 cut(s) | 464 |
| MunI | CAATTG | 1 cut(s) | 416 |
| Mva1269I | GAATGC | 1 cut(s) | 958 |
| MvnI | CGCG | 1 cut(s) | 823 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 964 |
| NcoI | CCATGG | 2 cut(s) | 83, 167 |
| NdeI | CATATG | 1 cut(s) | 176 |
| NdeII | GATC | 4 cut(s) | 223, 325, 539, 843 |
| NlaIII | CATG | 4 cut(s) | 87, 171, 204, 974 |
| NlaIV | GGNNCC | 1 cut(s) | 712 |
| NmuCI | GTSAC | 2 cut(s) | 319, 862 |
| NsiI | ATGCAT | 1 cut(s) | 461 |
| PauI | GCGCGC | 1 cut(s) | 821 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 255, 598 |
| PctI | GAATGC | 1 cut(s) | 958 |
| PfeI | GAWTC | 2 cut(s) | 26, 895 |
| PkrI | GCNGC | 3 cut(s) | 664, 904, 907 |
| PleI | GAGTC | 3 cut(s) | 139, 305, 943 |
| PpsI | GAGTC | 3 cut(s) | 139, 305, 943 |
| PspN4I | GGNNCC | 1 cut(s) | 712 |
| PspPI | GGNCC | 2 cut(s) | 171, 280 |
| PsuI | RGATCY | 2 cut(s) | 223, 539 |
| PteI | GCGCGC | 1 cut(s) | 821 |
| RsaI | GTAC | 2 cut(s) | 153, 879 |
| RsaNI | GTAC | 2 cut(s) | 152, 878 |
| SaqAI | TTAA | 1 cut(s) | 464 |
| SatI | GCNGC | 3 cut(s) | 663, 903, 906 |
| Sau3AI | GATC | 4 cut(s) | 223, 325, 539, 843 |
| Sau96I | GGNCC | 2 cut(s) | 171, 280 |
| ScaI | AGTACT | 1 cut(s) | 153 |
| SchI | GAGTC | 3 cut(s) | 140, 306, 943 |
| SduI | GDGCHC | 1 cut(s) | 120 |
| SfaNI | GCATC | 1 cut(s) | 468 |
| SinI | GGWCC | 2 cut(s) | 171, 280 |
| SpeI | ACTAGT | 1 cut(s) | 695 |
| Sse9I | AATT | 8 cut(s) | 162, 207, 365, 410, 416, 483, 489, 673 |
| SspMI | CTAG | 4 cut(s) | 62, 627, 696, 707 |
| StyI | CCWWGG | 2 cut(s) | 83, 167 |
| TaaI | ACNGT | 3 cut(s) | 38, 818, 868 |
| TaiI | ACGT | 2 cut(s) | 348, 380 |
| TaqI | TCGA | 3 cut(s) | 24, 129, 468 |
| TasI | AATT | 8 cut(s) | 162, 207, 365, 410, 416, 483, 489, 673 |
| TatI | WGTACW | 1 cut(s) | 151 |
| TfiI | GAWTC | 2 cut(s) | 26, 895 |
| Tru1I | TTAA | 1 cut(s) | 464 |
| Tru9I | TTAA | 1 cut(s) | 464 |
| TscAI | CASTG | 2 cut(s) | 823, 860 |
| TseFI | GTSAC | 2 cut(s) | 319, 862 |
| TseI | GCWGC | 3 cut(s) | 662, 902, 905 |
| Tsp45I | GTSAC | 2 cut(s) | 319, 862 |
| TspDTI | ATGAA | 3 cut(s) | 278, 714, 959 |
| TspGWI | ACGGA | 2 cut(s) | 124, 754 |
| TspRI | CASTG | 2 cut(s) | 823, 860 |
| VpaK11BI | GGWCC | 2 cut(s) | 171, 280 |
| XapI | RAATTY | 3 cut(s) | 162, 365, 410 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 174 |
| XspI | CTAG | 4 cut(s) | 62, 627, 696, 707 |
| ZrmI | AGTACT | 1 cut(s) | 153 |
| Zsp2I | ATGCAT | 1 cut(s) | 461 |