pycom05g27790

Cyclic nucleotide-gated ion channel 1-like

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
Physical Location & Seq
Forward (+)
28674942 .. 28681692
6751 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom05g27790.7

Sequence Viewer

Length: 1920 bp
ATGGCTAAGCGTAAAGTAACGTGTGATGTGGAGAACTCGACAAGTACTAAACAACAAGACGAATATGAGACAAATGAAGGATATTATGGAGCACATAAGGAACTACCAATTAATCCAAAATTTCTTGATGTACGTGGGCTAACATTCCTCGCATCGTGGAAGACGATATTTGCAATATCATGTACATTTGGAATCTTGGTGGATCCTTTATTCTTCTATATTCCTTTCGTCAATAAGAATATGAAGTGCTTCGAGTTGGATAAAAAGTTGAAGACAGTAGCTCTTGTATCACGATTACTTACAGATTTCATGTATGTAATCGACATTATCCTTCAAATTTCGATCGTGATTTTGGCAAAACGAAGGATATTAGTCAATAATCCTTTTGCAATGTTGGCTAAGTGGGCTTGGAAATCATACATTATTATGGACATTTTGGCCGTTCTTCCTGCACCTCAGGTTTTAACATTTATATTGTTTCCGAAAACGAGGGGCTCAAGCTCTTTGCTTGCTAAGGAGCTTATGACTACTCTTGCTCTGTTACAATACGTCCCAAGGATTATTCGCATCTACGTATCATGTAAAGAATTCCACAAGAGTCGTACAACTGAGACTGGAAAATGGATATTCTTCAAAGGAGGATTCAGCCTCTTTCTTTACATCCTTACTAGTCATGTACTTGGAGCTTTTTGGTACTTTTTAGCTATGCAAAGAGAGTCAACTTGCTGGCAACTTGCTTGTCAAAGTGATCAAAATGGATGTAAACCTAGTACTTTTTACTGCAATGATCGTTTGTTCCAAAATATCACAACCCTAAATGATCTATGCCCTATAAATCCGTCAGATGTAAAAGTTTTCGATTTTGGGATATTTCTTGATGCTCTTCAGTCCGGTGTGGTGGAGTCAACGGACTTCCCCAGAAAGCTTTTGCATTGTTTCTGGTGGGGACTTAGAAATCTAAGTTCTCTCGGATCGAACCTGGAGACCAGTAGCTACGCAATGGAAAATCTGTTTGCCGTTTTTATTTCTTTATTTGGCTTGCTACTACTTATATTTTACCTCAGTGGAAATTTGCAGCAGATATTTACGCATAGGGTAACTAGATCATCAGATAAGAGGAAAGTTCTACGGCAGAGGTGGAAAGTTCAACGGCTGAAGGAGATGAAAGAGTTGGAGATCCAAAGCTGGTTTTCTGAAAATGGCATTGGCATCCCTAAGCATATGAAGAAGGTGATTAAGGAAAGGCTACAAATACATCTAGAAGAAGAAAAAAACATCGATGTTAATATGAAGAGTATCATCTCTATTGTTTCCGTGGAAGATAAAAGATTAATCAAACTCTATTTATGCTGGTCTACGCTAAAAAAAGTGCCAATGTTTCGAACCCTGGATGAAGAAGTGCTGAAAATAATTTGTCAAAGCCTTACACCAGTGATGTTTACTGAGGATGCCTACATTGTTGAAGAGGGGAAACCGCTTGATAAGATGTTATTCATCACGCAAGGCATTGTATGGAGCTACAGATCTAGTAATAATAATAACAATAATCATAATAATACTGGATGCACTCGCTGTCTTAAGAAAGGTGATTTCTACGGAGAAGAACTTCTAGATTGGGTATCGAAAGTTAGCTCCTCGATTGCCTTACCGATCTCGACCAGGTTTGTCAAGTCCCACACAAAAGTTGAAGCCTTTGTTCTAAGGGCTTACGACTTGAAAACTATAGTCTCCCAAAACTGGTTGCGTTTTGTCATGGTCACTTCGCCCTCTCGGAAGCAGCATCTAGCAGCTTCTGCCCTTCAAGAAAGTTGGCGCCGCCATCATGAAAGGAAGGCACAGGCTCTGCATCTTGCCCAGGTGAGAGAAATGGGGAATAAAGAAATAACGGATGAAGTACCTCTTCTAGGTCAGTTCAAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

640

Amino Acids

74.01

Weight (kDa)

9.34

Isoelectric Point (pI)

43.77

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000017)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07351 FvH4_1g11800 FvH4_1g11800 FvH4_1g11800 FvH4_1g11800 FvH4_1g11800 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_4g14360 FvH4_6g13561 FvH4_6g13562 FvH4_6g13580 FvH4_6g13590 FvH4_6g13590 FvH4_6g13590 FvH4_6g13731 FvH4_6g13770 FvH4_6g13800 FvH4_6g13800 FvH4_6g13860 FvH4_6g13870 FvH4_6g13870 FvH4_6g13870 FvH4_6g13870 FvH4_6g13870 FvH4_6g13890 FvH4_6g33801 FvH4_7g13020 FvH4_7g13270 FvH4_7g13270 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g14580 FvH4_7g14580 FvH4_7g14580 FvH4_7g14600 FvH4_7g14600 FvH4_7g20030 FvH4_7g20510 FvH4_7g20510 FvH4_7g20510 FvH4_7g20670 FvH4_7g20670 FvH4_7g20670 FvH4_7g20670 FvH4_7g20690 FvH4_7g20690 FvH4_7g31930 FvH4_7g31930 FvH4_7g31940 FvH4_7g31940
malus_domestica MD01G1115700.v1.1 MD01G1115800.v1.1 MD01G1116600.v1.1 MD01G1116700.v1.1 MD01G1117000.v1.1 MD01G1225000.v1.1 MD02G1077900.v1.1 MD02G1078000.v1.1 MD02G1078200.v1.1 MD02G1078400.v1.1 MD02G1084300.v1.1 MD04G1004700.v1.1 MD04G1123100.v1.1 MD04G1123200.v1.1 MD04G1128000.v1.1 MD04G1128400.v1.1 MD05G1299700.v1.1 MD05G1300000.v1.1 MD07G1184000.v1.1 MD07G1292300.v1.1 MD08G1214800.v1.1
prunus_persica Prupe.1G205100_v2.0.a1 Prupe.1G205100_v2.0.a1 Prupe.1G205200_v2.0.a1 Prupe.2G222300_v2.0.a1 Prupe.2G223300_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223600_v2.0.a1 Prupe.2G223600_v2.0.a1 Prupe.2G223600_v2.0.a1 Prupe.2G223700_v2.0.a1 Prupe.2G223700_v2.0.a1 Prupe.2G223700_v2.0.a1 Prupe.2G223700_v2.0.a1 Prupe.2G223800_v2.0.a1 Prupe.2G223900_v2.0.a1 Prupe.2G224000_v2.0.a1 Prupe.5G162000_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G291000_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G210400_v2.0.a1 Prupe.7G210600_v2.0.a1 Prupe.7G210700_v2.0.a1 Prupe.7G210800_v2.0.a1 Prupe.7G210900_v2.0.a1 Prupe.8G097600_v2.0.a1 Prupe.8G097800_v2.0.a1 Prupe.8G097800_v2.0.a1
pyrus_communis pycom01g14430 pycom01g14440 pycom01g23130 pycom01g23160 pycom01g23330 pycom02g06210 pycom02g06220 pycom02g06250 pycom02g06270 pycom02g06710 pycom03g05360 pycom03g05380 pycom04g11470 pycom04g11480 pycom04g11520 pycom04g11560 pycom04g11600 pycom04g11610 pycom04g11650 pycom04g11660 pycom04g11670 pycom05g27790 pycom07g17630 pycom08g20960 pycom126g00020 pycom126g00030
rosa_chinensis RchiOBHm_Chr1g0318251 RchiOBHm_Chr1g0318731 RchiOBHm_Chr1g0339101 RchiOBHm_Chr1g0339111 RchiOBHm_Chr1g0347151 RchiOBHm_Chr1g0347161 RchiOBHm_Chr1g0347221 RchiOBHm_Chr1g0352401 RchiOBHm_Chr1g0352441 RchiOBHm_Chr1g0352461 RchiOBHm_Chr1g0356131 RchiOBHm_Chr1g0363991 RchiOBHm_Chr1g0364791 RchiOBHm_Chr1g0364801 RchiOBHm_Chr1g0364811 RchiOBHm_Chr1g0364851 RchiOBHm_Chr1g0364951 RchiOBHm_Chr1g0370821 RchiOBHm_Chr1g0381221 RchiOBHm_Chr1g0381231 RchiOBHm_Chr1g0381261 RchiOBHm_Chr1g0381271 RchiOBHm_Chr1g0381341 RchiOBHm_Chr1g0381351 RchiOBHm_Chr1g0381391 RchiOBHm_Chr1g0381801 RchiOBHm_Chr1g0381821 RchiOBHm_Chr2g0093241 RchiOBHm_Chr2g0116391 RchiOBHm_Chr3g0466441 RchiOBHm_Chr3g0466631 RchiOBHm_Chr3g0466651 RchiOBHm_Chr3g0496921 RchiOBHm_Chr4g0400441 RchiOBHm_Chr4g0400501 RchiOBHm_Chr4g0400511 RchiOBHm_Chr4g0400691 RchiOBHm_Chr4g0400701 RchiOBHm_Chr4g0404331 RchiOBHm_Chr5g0052101 RchiOBHm_Chr5g0052111 RchiOBHm_Chr5g0052171 RchiOBHm_Chr5g0052181 RchiOBHm_Chr6g0264161 RchiOBHm_Chr6g0265551 RchiOBHm_Chr7g0213571 RchiOBHm_Chr7g0213581
rosa_laevigata RLG00000002796 RLG00000003261 RLG00000007935 RLG00000007936 RLG00000009187 RLG00000014179 RLG00000016381 RLG00000018265 RLG00000024558 RLG00000024574 RLG00000026232 RLG00000026234 RLG00000026236 RLG00000026237 RLG00000027459 RLG00000027461 RLG00000027463 RLG00000027530 RLG00000028103 RLG00000028304 RLG00000028333 RLG00000029214 RLG00000029848 RLG00000029951 RLG00000030115 RLG00000030552 RLG00000033668 RLG00000034840 RLG00000034841 RLG00000034842 RLG00000035830
rosa_multiflora Rmu_sc0000654.1_g000004 Rmu_sc0000675.1_g000025 Rmu_sc0001075.1_g000002 Rmu_sc0001726.1_g000004 Rmu_sc0001772.1_g000061 Rmu_sc0001772.1_g000065 Rmu_sc0002067.1_g000002 Rmu_sc0002183.1_g000001 Rmu_sc0002183.1_g000006 Rmu_sc0002244.1_g000003 Rmu_sc0002313.1_g000004 Rmu_sc0002319.1_g000004 Rmu_sc0002539.1_g000085 Rmu_sc0002636.1_g000004 Rmu_sc0003229.1_g000007 Rmu_sc0003313.1_g000020 Rmu_sc0003546.1_g000007 Rmu_sc0003724.1_g000015 Rmu_sc0003936.1_g000029 Rmu_sc0004191.1_g000067 Rmu_sc0004525.1_g000012 Rmu_sc0005122.1_g000009 Rmu_sc0005255.1_g000040 Rmu_sc0005338.1_g000016 Rmu_sc0005584.1_g000008 Rmu_sc0006460.1_g000013 Rmu_sc0006872.1_g000011 Rmu_sc0006872.1_g000015 Rmu_sc0006872.1_g000016 Rmu_sc0006952.1_g000013 Rmu_sc0007342.1_g000005 Rmu_sc0007342.1_g000006 Rmu_sc0008418.1_g000003 Rmu_sc0008418.1_g000006 Rmu_sc0008636.1_g000007 Rmu_sc0008636.1_g000008 Rmu_sc0009205.1_g000014 Rmu_sc0009365.1_g000014 Rmu_sc0009917.1_g000002 Rmu_sc0019289.1_g000003 Rmu_ssc0000098.1_g000011 Rmu_ssc0000098.1_g000012 Rmu_ssc0000167.1_g000018 Rmu_ssc0000167.1_g000024 Rmu_ssc0000326.1_g000015
rosa_roxburghii Rroxscaffold_166G00440780 Rroxscaffold_176G00431500 Rroxscaffold_1G00015080 Rroxscaffold_1G00027880 Rroxscaffold_1G00027890 Rroxscaffold_1G00027920 Rroxscaffold_2G00127250 Rroxscaffold_2G00148380 Rroxscaffold_3G00219450 Rroxscaffold_3G00232170 Rroxscaffold_3G00232210 Rroxscaffold_3G00242230 Rroxscaffold_3G00242240 Rroxscaffold_3G00244790 Rroxscaffold_3G00245790 Rroxscaffold_4G00278400 Rroxscaffold_4G00278430 Rroxscaffold_4G00278670 Rroxscaffold_4G00278680 Rroxscaffold_4G00278690 Rroxscaffold_4G00278700 Rroxscaffold_4G00278720 Rroxscaffold_4G00291690 Rroxscaffold_4G00292070 Rroxscaffold_4G00292090 Rroxscaffold_4G00292770 Rroxscaffold_4G00302240 Rroxscaffold_4G00302860 Rroxscaffold_4G00311320 Rroxscaffold_4G00311330 Rroxscaffold_4G00320570 Rroxscaffold_4G00322050 Rroxscaffold_4G00329480 Rroxscaffold_4G00329730 Rroxscaffold_5G00345500 Rroxscaffold_5G00345510 Rroxscaffold_5G00360830 Rroxscaffold_5G00360840 Rroxscaffold_6G00393450 Rroxscaffold_6G00404030 Rroxscaffold_6G00414220 Rroxscaffold_6G00414230 Rroxscaffold_6G00414280 Rroxscaffold_6G00414290 Rroxscaffold_6G00414350 Rroxscaffold_6G00414470 Rroxscaffold_7G00202570 Rroxscaffold_7G00203460 Rroxscaffold_7G00203470
rosa_rugosa Rorug01G0020500 Rorug01G0020600 Rorug01G0020700 Rorug01G0143700.1 Rorug01G0225700 Rorug01G0228500 Rorug01G0228600 Rorug01G0228600 Rorug01G0228700 Rorug01G0228800 Rorug01G0228800 Rorug01G0229000 Rorug01G0229300 Rorug01G0229400 Rorug01G0229600 Rorug01G0229700 Rorug01G0232200 Rorug01G0232600 Rorug01G0232600 Rorug01G0311900 Rorug01G0311900 Rorug01G0318400 Rorug01G0318500 Rorug01G0318500 Rorug01G0318500 Rorug01G0427900 Rorug01G0427900 Rorug01G0428000 Rorug01G0428200 Rorug01G0428300 Rorug01G0428400 Rorug01G0431500 Rorug01G0431600 Rorug01G0431600 Rorug02G0033800 Rorug02G0206300 Rorug03G0081900 Rorug03G0083200 Rorug03G0083200 Rorug03G0083300 Rorug04G0025100 Rorug04G0025100 Rorug04G0025200 Rorug04G0025300 Rorug04G0058600 Rorug04G0058700 Rorug04G0058800 Rorug04G0098400 Rorug04G0098500 Rorug05G0274500 Rorug05G0274600 Rorug05G0274800 Rorug06G0008500 Rorug06G0009100 Rorug06G0018000
rosa_samantha Rh1AG031700 Rh1AG036100 Rh1AG089800 Rh1AG239800 Rh1AG239900 Rh1AG242000 Rh1AG242300 Rh1AG245600 Rh1AG262600 Rh1AG319700 Rh1AG319800 Rh1AG319900 Rh1AG327200 Rh1AG451100 Rh1AG451200 Rh1AG451300 Rh1AG451600 Rh1AG451700 Rh1BG027200 Rh1BG071600 Rh1BG090700 Rh1BG211000 Rh1BG213000 Rh1BG213500 Rh1BG282800 Rh1BG288400 Rh1BG408100 Rh1BG408200 Rh1BG408400 Rh1BG408700 Rh1CG026300 Rh1CG028300 Rh1CG224100 Rh1CG226000 Rh1CG226100 Rh1CG229300 Rh1CG229400 Rh1CG245900 Rh1CG299200 Rh1CG299400 Rh1CG299500 Rh1CG303300 Rh1CG305100 Rh1CG422500 Rh1CG422600 Rh1CG422700 Rh1CG422800 Rh1CG422900 Rh1CG423100 Rh1CG423300 Rh1CG423400 Rh1CG426300 Rh1CG426600 Rh1DG239300 Rh1DG239600 Rh1DG258300 Rh1DG314200 Rh1DG314300 Rh1DG314400 Rh1DG320000 Rh1DG439200 Rh1DG439400 Rh1DG439500 Rh1DG439700 Rh1DG440000 Rh1DG443800 Rh2AG261800 Rh2BG080900 Rh2CG083300 Rh2DG078900 Rh2DG270000 Rh2DG270100 Rh3AG128400 Rh3AG130100 Rh3AG130500 Rh3AG332500 Rh3AG332600 Rh3AG332800 Rh3BG149700 Rh3BG151500 Rh3CG151400 Rh3CG354500 Rh3CG366800 Rh3DG150500 Rh3DG152200 Rh4AG101400 Rh4AG102900 Rh4AG148300 Rh4AG148600 Rh4BG098000 Rh4CG111100 Rh4CG111300 Rh4CG155100 Rh4DG094800 Rh5AG213600 Rh5AG346900 Rh5AG347000 Rh5BG357500 Rh5BG357700 Rh5BG485400 Rh5CG383100 Rh5CG383200 Rh5CG383300 Rh5CG509900 Rh5DG373000 Rh5DG373200 Rh6BG054300 Rh6BG126300 Rh6CG125100 Rh6CG185300 Rh6DG177000 Rh7AG276100 Rh7AG276200 Rh7BG230500 Rh7BG270500 Rh7BG364000 Rh7CG250100 Rh7CG295200 Rh7CG295300 Rh7DG389700
rosa_wichuraiana Rw0G001190 Rw0G010680 Rw0G013360 Rw0G014310 Rw0G014890 Rw0G020310 Rw0G021350 Rw0G022510 Rw1G003360 Rw1G004330 Rw1G006930 Rw1G008310 Rw1G021090 Rw1G021150 Rw1G021210 Rw1G023200 Rw1G023210 Rw1G028340 Rw1G028350 Rw1G028990 Rw1G032510 Rw1G039370 Rw1G039400 Rw1G039410 Rw1G039420 Rw1G039430 Rw2G006700 Rw2G020550 Rw2G020580 Rw3G012130 Rw3G012300 Rw3G012310 Rw3G028220 Rw3G029230 Rw5G021600 Rw5G032790 Rw6G011240 Rw7G027670 Rw7G032780

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1812
AccI GTMKAC 1 cut(s) 1355
AciI CCGC 2 cut(s) 1475, 1816
AclWI GGATC 4 cut(s) 197, 210, 979, 1171
AcoI YGGCCR 1 cut(s) 438
AcsI RAATTY 4 cut(s) 119, 336, 587, 1069
AcuI CTGAAG 2 cut(s) 869, 1175
AcyI GRCGYC 1 cut(s) 1813
AfaI GTAC 8 cut(s) 46, 132, 184, 604, 678, 695, 772, 1896
AfiI CCNNNNNNNGG 2 cut(s) 1737, 1904
AflII CTTAAG 1 cut(s) 1577
AflIII ACRYGT 1 cut(s) 20
AgsI TTSAA 9 cut(s) 271, 335, 634, 1148, 1463, 1688, 1717, 1802, 1915
AhlI ACTAGT 1 cut(s) 668
AjnI CCWGG 4 cut(s) 978, 1386, 1658, 1854
AjuI GAANNNNNNNTTGG 2 cut(s) 1188, 1220
Alw21I GWGCWC 1 cut(s) 94
Alw26I GTCTC 4 cut(s) 62, 605, 977, 1732
AlwI GGATC 4 cut(s) 197, 210, 979, 1171
AlwNI CAGNNNCTG 2 cut(s) 1793, 1843
AoxI GGCC 1 cut(s) 438
ApeKI GCWGC 3 cut(s) 1075, 1777, 1787
ApoI RAATTY 4 cut(s) 119, 336, 587, 1069
AseI ATTAAT 2 cut(s) 111, 1331
Asp700I GAANNNNTTC 2 cut(s) 248, 1605
AspLEI GCGC 1 cut(s) 1815
AsuHPI GGTGA 3 cut(s) 1243, 1598, 1870
AsuII TTCGAA 1 cut(s) 1381
AxyI CCTNAGG 1 cut(s) 456
BamHI GGATCC 1 cut(s) 202
BanI GGYRCC 1 cut(s) 1812
BanII GRGCYC 1 cut(s) 497
BbsI GAAGAC 2 cut(s) 167, 278
Bbv12I GWGCWC 1 cut(s) 94
BbvI GCAGC 3 cut(s) 1087, 1789, 1799
BccI CCATC 1 cut(s) 1827
BceAI ACGGC 4 cut(s) 425, 1001, 1145, 1166
BciT130I CCWGG 4 cut(s) 980, 1388, 1660, 1856
BclI TGATCA 1 cut(s) 748
BcoDI GTCTC 4 cut(s) 62, 605, 977, 1732
BcuI ACTAGT 1 cut(s) 668
BfaI CTAG 8 cut(s) 669, 768, 1101, 1259, 1527, 1610, 1784, 1904
BfmI CTRYAG 2 cut(s) 1519, 1722
BfoI RGCGCY 1 cut(s) 1816
BfrI CTTAAG 1 cut(s) 1577
BglII AGATCT 1 cut(s) 1523
BisI GCNGC 4 cut(s) 1076, 1778, 1788, 1816
BlpI GCTNAGC 1 cut(s) 6
BlsI GCNGC 4 cut(s) 1077, 1779, 1789, 1817
BmcAI AGTACT 2 cut(s) 46, 772
Bme1390I CCNGG 4 cut(s) 980, 1388, 1660, 1856
BmiI GGNNCC 2 cut(s) 204, 1814
BmrFI CCNGG 4 cut(s) 980, 1388, 1660, 1856
BmsI GCATC 8 cut(s) 161, 576, 868, 1218, 1438, 1553, 1789, 1855
BpiI GAAGAC 2 cut(s) 167, 278
BpmI CTGGAG 1 cut(s) 1001
Bpu10I CCTNAGC 2 cut(s) 513, 1215
Bpu1102I GCTNAGC 1 cut(s) 6
Bpu14I TTCGAA 1 cut(s) 1381
BpuEI CTTGAG 1 cut(s) 481
Bsa29I ATCGAT 1 cut(s) 1278
BsaAI YACGTR 2 cut(s) 134, 574
BsaHI GRCGYC 1 cut(s) 1813
BsaI GGTCTC 1 cut(s) 977
BsaJI CCNNGG 4 cut(s) 554, 1314, 1386, 1854
BsaWI WCCGGW 1 cut(s) 890
Bsc4I CCNNNNNNNGG 2 cut(s) 1737, 1904
Bse1I ACTGG 5 cut(s) 619, 987, 1430, 1564, 1742
Bse21I CCTNAGG 1 cut(s) 456
Bse3DI GCAATG 3 cut(s) 396, 790, 1005
BseBI CCWGG 4 cut(s) 980, 1388, 1660, 1856
BseCI ATCGAT 1 cut(s) 1278
BseDI CCNNGG 4 cut(s) 554, 1314, 1386, 1854
BseGI GGATG 7 cut(s) 660, 764, 1209, 1396, 1453, 1568, 1894
BseLI CCNNNNNNNGG 2 cut(s) 1737, 1904
BseMI GCAATG 3 cut(s) 396, 790, 1005
BseMII CTCAG 4 cut(s) 470, 600, 1075, 1434
BseNI ACTGG 5 cut(s) 619, 987, 1430, 1564, 1742
BseRI GAGGAG 1 cut(s) 1624
BseXI GCAGC 3 cut(s) 1087, 1789, 1799
BsgI GTGCAG 1 cut(s) 435
Bsh1285I CGRYCG 1 cut(s) 345
BshFI GGCC 1 cut(s) 440
BshNI GGYRCC 1 cut(s) 1812
BshVI ATCGAT 1 cut(s) 1278
BsiEI CGRYCG 1 cut(s) 345
BsiHKAI GWGCWC 1 cut(s) 94
BsiSI CCGG 1 cut(s) 891
BslFI GGGAC 3 cut(s) 536, 960, 1657
BslI CCNNNNNNNGG 2 cut(s) 1737, 1904
BsmAI GTCTC 4 cut(s) 62, 605, 977, 1732
BsmFI GGGAC 3 cut(s) 536, 960, 1657
BsnI GGCC 1 cut(s) 440
Bso31I GGTCTC 1 cut(s) 977
Bsp119I TTCGAA 1 cut(s) 1381
Bsp1286I GDGCHC 2 cut(s) 94, 497
Bsp1407I TGTACA 1 cut(s) 182
Bsp1720I GCTNAGC 1 cut(s) 6
BspACI CCGC 2 cut(s) 1475, 1816
BspANI GGCC 1 cut(s) 440
BspCNI CTCAG 4 cut(s) 469, 601, 1074, 1435
BspDI ATCGAT 1 cut(s) 1278
BspHI TCATGA 1 cut(s) 1822
BspLI GGNNCC 2 cut(s) 204, 1814
BspPI GGATC 4 cut(s) 197, 210, 979, 1171
BspQI GCTCTTC 1 cut(s) 888
BspT104I TTCGAA 1 cut(s) 1381
BspT107I GGYRCC 1 cut(s) 1812
BspTI CTTAAG 1 cut(s) 1577
BspTNI GGTCTC 1 cut(s) 977
BsrDI GCAATG 3 cut(s) 396, 790, 1005
BsrGI TGTACA 1 cut(s) 182
BsrI ACTGG 5 cut(s) 619, 987, 1430, 1564, 1742
BssECI CCNNGG 4 cut(s) 554, 1314, 1386, 1854
BssNI GRCGYC 1 cut(s) 1813
BssT1I CCWWGG 1 cut(s) 554
Bst2UI CCWGG 4 cut(s) 980, 1388, 1660, 1856
Bst4CI ACNGT 1 cut(s) 277
Bst6I CTCTTC 4 cut(s) 888, 1286, 1458, 1905
BstACI GRCGYC 1 cut(s) 1813
BstAFI CTTAAG 1 cut(s) 1577
BstAPI GCANNNNNTGC 1 cut(s) 1793
BstAUI TGTACA 1 cut(s) 182
BstBAI YACGTR 2 cut(s) 134, 574
BstBI TTCGAA 1 cut(s) 1381
BstC8I GCNNGC 3 cut(s) 510, 728, 1040
BstDSI CCRYGG 1 cut(s) 1314
BstENI CCTNNNNNAGG 1 cut(s) 1902
BstF5I GGATG 7 cut(s) 660, 764, 1209, 1396, 1453, 1568, 1894
BstH2I RGCGCY 1 cut(s) 1816
BstHHI GCGC 1 cut(s) 1815
BstMAI GTCTC 4 cut(s) 62, 605, 977, 1732
BstMCI CGRYCG 1 cut(s) 345
BstMWI GCNNNNNNNGC 3 cut(s) 395, 404, 1793
BstNI CCWGG 4 cut(s) 980, 1388, 1660, 1856
BstSCI CCNGG 4 cut(s) 978, 1386, 1658, 1854
BstSFI CTRYAG 2 cut(s) 1519, 1722
BstSNI TACGTA 1 cut(s) 574
BstV1I GCAGC 3 cut(s) 1087, 1789, 1799
BstV2I GAAGAC 2 cut(s) 167, 278
BstX2I RGATCY 3 cut(s) 202, 1176, 1523
BstYI RGATCY 3 cut(s) 202, 1176, 1523
Bsu15I ATCGAT 1 cut(s) 1278
Bsu36I CCTNAGG 1 cut(s) 456
BsuRI GGCC 1 cut(s) 440
BsuTUI ATCGAT 1 cut(s) 1278
BtgI CCRYGG 1 cut(s) 1314
BtsCI GGATG 7 cut(s) 660, 764, 1209, 1396, 1453, 1568, 1894
BtsIMutI CAGTG 2 cut(s) 1069, 1437
Cac8I GCNNGC 3 cut(s) 510, 728, 1040
CaiI CAGNNNCTG 2 cut(s) 1793, 1843
CciI TCATGA 1 cut(s) 1822
CfoI GCGC 1 cut(s) 1815
ClaI ATCGAT 1 cut(s) 1278
CsiI ACCWGGT 1 cut(s) 1658
Csp6I GTAC 8 cut(s) 45, 131, 183, 603, 677, 694, 771, 1895
CviAII CATG 6 cut(s) 180, 310, 579, 674, 1753, 1823
CviQI GTAC 8 cut(s) 45, 131, 183, 603, 677, 694, 771, 1895
DinI GGCGCC 1 cut(s) 1814
EaeI YGGCCR 1 cut(s) 438
Eam1104I CTCTTC 4 cut(s) 888, 1286, 1458, 1905
EarI CTCTTC 4 cut(s) 888, 1286, 1458, 1905
Eco105I TACGTA 1 cut(s) 574
Eco130I CCWWGG 1 cut(s) 554
Eco24I GRGCYC 1 cut(s) 497
Eco31I GGTCTC 1 cut(s) 977
Eco57I CTGAAG 2 cut(s) 869, 1175
Eco81I CCTNAGG 1 cut(s) 456
EcoNI CCTNNNNNAGG 1 cut(s) 1902
EcoRI GAATTC 1 cut(s) 587
EcoRII CCWGG 4 cut(s) 978, 1386, 1658, 1854
EcoT14I CCWWGG 1 cut(s) 554
EcoT38I GRGCYC 1 cut(s) 497
EgeI GGCGCC 1 cut(s) 1814
EheI GGCGCC 1 cut(s) 1814
ErhI CCWWGG 1 cut(s) 554
FaeI CATG 6 cut(s) 183, 313, 582, 677, 1756, 1826
FalI AAGNNNNNCTT 2 cut(s) 1884, 1916
FaqI GGGAC 3 cut(s) 536, 960, 1657
FatI CATG 6 cut(s) 179, 309, 578, 673, 1752, 1822
FauNDI CATATG 1 cut(s) 1221
FbaI TGATCA 1 cut(s) 748
FblI GTMKAC 1 cut(s) 1355
Fnu4HI GCNGC 4 cut(s) 1076, 1778, 1788, 1816
FokI GGATG 7 cut(s) 647, 771, 1196, 1403, 1460, 1575, 1901
FriOI GRGCYC 1 cut(s) 497
Fsp4HI GCNGC 4 cut(s) 1076, 1778, 1788, 1816
FspBI CTAG 8 cut(s) 669, 768, 1101, 1259, 1527, 1610, 1784, 1904
GlaI GCGC 1 cut(s) 1814
GluI GCNGC 4 cut(s) 1076, 1778, 1788, 1816
GsuI CTGGAG 1 cut(s) 1001
HaeII RGCGCY 1 cut(s) 1816
HaeIII GGCC 1 cut(s) 440
HapII CCGG 1 cut(s) 891
HhaI GCGC 1 cut(s) 1815
Hin1I GRCGYC 1 cut(s) 1813
Hin1II CATG 6 cut(s) 183, 313, 582, 677, 1756, 1826
Hin6I GCGC 1 cut(s) 1813
HinP1I GCGC 1 cut(s) 1813
HincII GTYRAC 2 cut(s) 720, 906
HindII GTYRAC 2 cut(s) 720, 906
HindIII AAGCTT 1 cut(s) 923
HinfI GANTC 5 cut(s) 192, 598, 642, 716, 902
HpaII CCGG 1 cut(s) 891
HphI GGTGA 3 cut(s) 1243, 1598, 1870
Hpy166II GTNNAC 5 cut(s) 720, 764, 906, 1356, 1440
Hpy188I TCNGA 6 cut(s) 483, 844, 971, 1111, 1195, 1773
Hpy188III TCNNGA 9 cut(s) 125, 291, 346, 875, 1259, 1610, 1654, 1802, 1823
Hpy8I GTNNAC 5 cut(s) 720, 764, 906, 1356, 1440
HpyAV CCTTC 7 cut(s) 71, 341, 357, 1150, 1222, 1808, 1825
HpyCH4III ACNGT 1 cut(s) 277
HpyCH4IV ACGT 4 cut(s) 20, 133, 549, 573
HpyCH4V TGCA 9 cut(s) 173, 389, 452, 709, 783, 931, 1075, 1566, 1846
HpyF10VI GCNNNNNNNGC 3 cut(s) 395, 404, 1793
HpySE526I ACGT 4 cut(s) 20, 133, 549, 573
Hsp92I GRCGYC 1 cut(s) 1813
Hsp92II CATG 6 cut(s) 183, 313, 582, 677, 1756, 1826
HspAI GCGC 1 cut(s) 1813
KasI GGCGCC 1 cut(s) 1812
Ksp22I TGATCA 1 cut(s) 748
LguI GCTCTTC 1 cut(s) 888
LmnI GCTCC 5 cut(s) 89, 517, 683, 1515, 1637
Lsp1109I GCAGC 3 cut(s) 1087, 1789, 1799
LweI GCATC 8 cut(s) 161, 576, 868, 1218, 1438, 1553, 1789, 1855
MabI ACCWGGT 1 cut(s) 1658
MaeI CTAG 8 cut(s) 669, 768, 1101, 1259, 1527, 1610, 1784, 1904
MaeII ACGT 4 cut(s) 20, 133, 549, 573
MaeIII GTNAC 4 cut(s) 16, 540, 1096, 1756
MflI RGATCY 3 cut(s) 202, 1176, 1523
MhlI GDGCHC 2 cut(s) 94, 497
MluCI AATT 6 cut(s) 108, 119, 336, 587, 1069, 1410
Mly113I GGCGCC 1 cut(s) 1813
MlyI GAGTC 3 cut(s) 607, 725, 911
MmeI TCCRAC 2 cut(s) 237, 1152
MroXI GAANNNNTTC 2 cut(s) 248, 1605
MseI TTAA 6 cut(s) 111, 464, 1236, 1284, 1331, 1578
MslI CAYNNNNRTG 1 cut(s) 425
MspCI CTTAAG 1 cut(s) 1577
MspI CCGG 1 cut(s) 891
MspR9I CCNGG 4 cut(s) 980, 1388, 1660, 1856
MvaI CCWGG 4 cut(s) 980, 1388, 1660, 1856
MwoI GCNNNNNNNGC 3 cut(s) 395, 404, 1793
NarI GGCGCC 1 cut(s) 1813
NdeI CATATG 1 cut(s) 1221
NlaIII CATG 6 cut(s) 183, 313, 582, 677, 1756, 1826
NlaIV GGNNCC 2 cut(s) 204, 1814
NmuCI GTSAC 1 cut(s) 1756
NspV TTCGAA 1 cut(s) 1381
PagI TCATGA 1 cut(s) 1822
PciSI GCTCTTC 1 cut(s) 888
PcsI WCGNNNNNNNCGW 1 cut(s) 161
PdmI GAANNNNTTC 2 cut(s) 248, 1605
PfeI GAWTC 2 cut(s) 192, 642
PkrI GCNGC 4 cut(s) 1077, 1779, 1789, 1817
Ple19I CGATCG 1 cut(s) 345
PleI GAGTC 3 cut(s) 606, 724, 910
PluTI GGCGCC 1 cut(s) 1816
PpsI GAGTC 3 cut(s) 606, 724, 910
Ppu21I YACGTR 2 cut(s) 134, 574
PshBI ATTAAT 2 cut(s) 111, 1331
Psp6I CCWGG 4 cut(s) 978, 1386, 1658, 1854
PspGI CCWGG 4 cut(s) 978, 1386, 1658, 1854
PspN4I GGNNCC 2 cut(s) 204, 1814
PstNI CAGNNNCTG 2 cut(s) 1793, 1843
PsuI RGATCY 3 cut(s) 202, 1176, 1523
PvuI CGATCG 1 cut(s) 345
RsaI GTAC 8 cut(s) 46, 132, 184, 604, 678, 695, 772, 1896
RsaNI GTAC 8 cut(s) 45, 131, 183, 603, 677, 694, 771, 1895
RseI CAYNNNNRTG 1 cut(s) 425
SapI GCTCTTC 1 cut(s) 888
SaqAI TTAA 6 cut(s) 111, 464, 1236, 1284, 1331, 1578
SatI GCNGC 4 cut(s) 1076, 1778, 1788, 1816
ScaI AGTACT 2 cut(s) 46, 772
SchI GAGTC 3 cut(s) 607, 725, 911
ScrFI CCNGG 4 cut(s) 980, 1388, 1660, 1856
SduI GDGCHC 2 cut(s) 94, 497
SexAI ACCWGGT 1 cut(s) 1658
SfaNI GCATC 8 cut(s) 161, 576, 868, 1218, 1438, 1553, 1789, 1855
SfcI CTRYAG 2 cut(s) 1519, 1722
SfoI GGCGCC 1 cut(s) 1814
SfuI TTCGAA 1 cut(s) 1381
SmiMI CAYNNNNRTG 1 cut(s) 425
SmlI CTYRAG 2 cut(s) 496, 1577
SmoI CTYRAG 2 cut(s) 496, 1577
SnaBI TACGTA 1 cut(s) 574
SpeI ACTAGT 1 cut(s) 668
Sse9I AATT 6 cut(s) 108, 119, 336, 587, 1069, 1410
SsiI CCGC 2 cut(s) 1475, 1816
SspDI GGCGCC 1 cut(s) 1812
SspMI CTAG 8 cut(s) 669, 768, 1101, 1259, 1527, 1610, 1784, 1904
StyD4I CCNGG 4 cut(s) 978, 1386, 1658, 1854
StyI CCWWGG 1 cut(s) 554
TaaI ACNGT 1 cut(s) 277
TaiI ACGT 4 cut(s) 23, 136, 552, 576
TasI AATT 6 cut(s) 108, 119, 336, 587, 1069, 1410
TatI WGTACW 4 cut(s) 44, 182, 676, 770
TauI GCSGC 1 cut(s) 1818
TfiI GAWTC 2 cut(s) 192, 642
Tru1I TTAA 6 cut(s) 111, 464, 1236, 1284, 1331, 1578
Tru9I TTAA 6 cut(s) 111, 464, 1236, 1284, 1331, 1578
TscAI CASTG 2 cut(s) 1069, 1437
TseFI GTSAC 1 cut(s) 1756
TseI GCWGC 3 cut(s) 1075, 1777, 1787
Tsp45I GTSAC 1 cut(s) 1756
TspGWI ACGGA 5 cut(s) 828, 923, 1303, 1611, 1901
TspRI CASTG 2 cut(s) 1069, 1437
Vha464I CTTAAG 1 cut(s) 1577
VspI ATTAAT 2 cut(s) 111, 1331
XagI CCTNNNNNAGG 1 cut(s) 1902
XapI RAATTY 4 cut(s) 119, 336, 587, 1069
XbaI TCTAGA 2 cut(s) 1258, 1609
XmiI GTMKAC 1 cut(s) 1355
XmnI GAANNNNTTC 2 cut(s) 248, 1605
XspI CTAG 8 cut(s) 669, 768, 1101, 1259, 1527, 1610, 1784, 1904
ZrmI AGTACT 2 cut(s) 46, 772
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.