Cyclic nucleotide-gated ion channel 1-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 1984 |
| AccI | GTMKAC | 2 cut(s) | 340, 986 |
| AccII | CGCG | 2 cut(s) | 615, 1730 |
| AciI | CCGC | 3 cut(s) | 555, 1730, 1858 |
| AclWI | GGATC | 5 cut(s) | 188, 1627, 1781, 1794, 1974 |
| AcsI | RAATTY | 6 cut(s) | 114, 327, 941, 1004, 1216, 1768 |
| AcuI | CTGAAG | 1 cut(s) | 1335 |
| AfaI | GTAC | 5 cut(s) | 743, 817, 1072, 1548, 1760 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 518, 1080, 1465, 1903 |
| AflIII | ACRYGT | 1 cut(s) | 613 |
| AgeI | ACCGGT | 1 cut(s) | 1803 |
| AjnI | CCWGG | 2 cut(s) | 513, 1589 |
| Alw21I | GWGCWC | 6 cut(s) | 36, 736, 936, 1046, 1458, 1993 |
| Alw26I | GTCTC | 2 cut(s) | 190, 1812 |
| AlwI | GGATC | 5 cut(s) | 188, 1627, 1781, 1794, 1974 |
| Ama87I | CYCGRG | 1 cut(s) | 1460 |
| AoxI | GGCC | 2 cut(s) | 264, 1956 |
| ApeKI | GCWGC | 4 cut(s) | 552, 1030, 1608, 2001 |
| ApoI | RAATTY | 6 cut(s) | 114, 327, 941, 1004, 1216, 1768 |
| AsiGI | ACCGGT | 1 cut(s) | 1803 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1016, 1629 |
| AspLEI | GCGC | 3 cut(s) | 964, 1377, 1730 |
| AspS9I | GGNCC | 2 cut(s) | 1560, 1956 |
| AsuHPI | GGTGA | 1 cut(s) | 1765 |
| AsuII | TTCGAA | 1 cut(s) | 539 |
| AsuNHI | GCTAGC | 1 cut(s) | 1925 |
| AvaI | CYCGRG | 1 cut(s) | 1460 |
| AvaII | GGWCC | 1 cut(s) | 1560 |
| BamHI | GGATCC | 1 cut(s) | 1786 |
| BanII | GRGCYC | 3 cut(s) | 736, 936, 1046 |
| Bbv12I | GWGCWC | 6 cut(s) | 36, 736, 936, 1046, 1458, 1993 |
| BbvI | GCAGC | 3 cut(s) | 539, 1017, 1620 |
| BccI | CCATC | 3 cut(s) | 65, 760, 1760 |
| BceAI | ACGGC | 1 cut(s) | 1082 |
| BciT130I | CCWGG | 2 cut(s) | 515, 1591 |
| BcoDI | GTCTC | 2 cut(s) | 190, 1812 |
| BfaI | CTAG | 7 cut(s) | 813, 977, 1242, 1257, 1920, 1926, 1994 |
| BfmI | CTRYAG | 3 cut(s) | 911, 1151, 1555 |
| BfuAI | ACCTGC | 1 cut(s) | 1984 |
| BglII | AGATCT | 1 cut(s) | 295 |
| BisI | GCNGC | 5 cut(s) | 553, 1031, 1609, 1858, 2002 |
| BlpI | GCTNAGC | 1 cut(s) | 1724 |
| BlsI | GCNGC | 5 cut(s) | 554, 1032, 1610, 1859, 2003 |
| Bme1390I | CCNGG | 2 cut(s) | 515, 1591 |
| Bme18I | GGWCC | 1 cut(s) | 1560 |
| BmeT110I | CYCGRG | 1 cut(s) | 1460 |
| BmgT120I | GGNCC | 2 cut(s) | 1560, 1956 |
| BmiI | GGNNCC | 2 cut(s) | 1588, 1788 |
| BmrFI | CCNGG | 2 cut(s) | 515, 1591 |
| BmsI | GCATC | 3 cut(s) | 176, 949, 1652 |
| BmtI | GCTAGC | 1 cut(s) | 1929 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1497, 1529 |
| BpmI | CTGGAG | 2 cut(s) | 114, 198 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1724 |
| Bpu14I | TTCGAA | 1 cut(s) | 539 |
| BpuEI | CTTGAG | 3 cut(s) | 301, 1382, 1619 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1529 |
| BsaI | GGTCTC | 1 cut(s) | 1812 |
| BsaJI | CCNNGG | 2 cut(s) | 360, 513 |
| BsaWI | WCCGGW | 1 cut(s) | 1803 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1878, 1908 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 518, 1080, 1465, 1903 |
| Bse118I | RCCGGY | 2 cut(s) | 1465, 1803 |
| Bse1I | ACTGG | 4 cut(s) | 97, 215, 1766, 1982 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1529 |
| BseBI | CCWGG | 2 cut(s) | 515, 1591 |
| BseDI | CCNNGG | 2 cut(s) | 360, 513 |
| BseGI | GGATG | 7 cut(s) | 356, 433, 477, 563, 708, 809, 1332 |
| BseJI | GATNNNNATC | 1 cut(s) | 1529 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 518, 1080, 1465, 1903 |
| BseMII | CTCAG | 5 cut(s) | 68, 360, 1031, 1470, 1715 |
| BseNI | ACTGG | 4 cut(s) | 97, 215, 1766, 1982 |
| BseRI | GAGGAG | 2 cut(s) | 90, 1832 |
| BseXI | GCAGC | 3 cut(s) | 539, 1017, 1620 |
| BsgI | GTGCAG | 3 cut(s) | 658, 1001, 1962 |
| Bsh1236I | CGCG | 2 cut(s) | 615, 1730 |
| Bsh1285I | CGRYCG | 2 cut(s) | 881, 1804 |
| BshFI | GGCC | 2 cut(s) | 266, 1958 |
| BshTI | ACCGGT | 1 cut(s) | 1803 |
| BsiEI | CGRYCG | 2 cut(s) | 881, 1804 |
| BsiHKAI | GWGCWC | 6 cut(s) | 36, 736, 936, 1046, 1458, 1993 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1460 |
| BsiSI | CCGG | 2 cut(s) | 1466, 1804 |
| BslFI | GGGAC | 3 cut(s) | 326, 593, 1263 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 518, 1080, 1465, 1903 |
| BsmAI | GTCTC | 2 cut(s) | 190, 1812 |
| BsmFI | GGGAC | 3 cut(s) | 326, 593, 1263 |
| BsnI | GGCC | 2 cut(s) | 266, 1958 |
| Bso31I | GGTCTC | 1 cut(s) | 1812 |
| BsoBI | CYCGRG | 1 cut(s) | 1460 |
| Bsp119I | TTCGAA | 1 cut(s) | 539 |
| Bsp1286I | GDGCHC | 6 cut(s) | 36, 736, 936, 1046, 1458, 1993 |
| Bsp143I | GATC | 9 cut(s) | 59, 193, 295, 470, 878, 1181, 1619, 1786, 1966 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1724 |
| BspACI | CCGC | 3 cut(s) | 555, 1730, 1858 |
| BspANI | GGCC | 2 cut(s) | 266, 1958 |
| BspCNI | CTCAG | 5 cut(s) | 67, 361, 1032, 1471, 1716 |
| BspFNI | CGCG | 2 cut(s) | 615, 1730 |
| BspLI | GGNNCC | 2 cut(s) | 1588, 1788 |
| BspMAI | CTGCAG | 1 cut(s) | 1155 |
| BspMI | ACCTGC | 1 cut(s) | 1984 |
| BspOI | GCTAGC | 1 cut(s) | 1929 |
| BspPI | GGATC | 5 cut(s) | 188, 1627, 1781, 1794, 1974 |
| BspQI | GCTCTTC | 2 cut(s) | 1620, 1663 |
| BspT104I | TTCGAA | 1 cut(s) | 539 |
| BspTNI | GGTCTC | 1 cut(s) | 1812 |
| BsrFI | RCCGGY | 2 cut(s) | 1465, 1803 |
| BsrI | ACTGG | 4 cut(s) | 97, 215, 1766, 1982 |
| BssAI | RCCGGY | 2 cut(s) | 1465, 1803 |
| BssECI | CCNNGG | 2 cut(s) | 360, 513 |
| BssMI | GATC | 9 cut(s) | 59, 193, 295, 470, 878, 1181, 1619, 1786, 1966 |
| BssNAI | GTATAC | 1 cut(s) | 341 |
| BssT1I | CCWWGG | 1 cut(s) | 360 |
| Bst1107I | GTATAC | 1 cut(s) | 341 |
| Bst2UI | CCWGG | 2 cut(s) | 515, 1591 |
| Bst4CI | ACNGT | 4 cut(s) | 1016, 1128, 1487, 1546 |
| Bst6I | CTCTTC | 4 cut(s) | 39, 305, 1620, 1663 |
| BstBI | TTCGAA | 1 cut(s) | 539 |
| BstC8I | GCNNGC | 4 cut(s) | 670, 1121, 1862, 1927 |
| BstDEI | CTNAG | 5 cut(s) | 54, 369, 1040, 1479, 1724 |
| BstF5I | GGATG | 7 cut(s) | 356, 433, 477, 563, 708, 809, 1332 |
| BstFNI | CGCG | 2 cut(s) | 615, 1730 |
| BstHHI | GCGC | 3 cut(s) | 964, 1377, 1730 |
| BstKTI | GATC | 9 cut(s) | 62, 196, 298, 473, 881, 1184, 1622, 1789, 1969 |
| BstMAI | GTCTC | 2 cut(s) | 190, 1812 |
| BstMBI | GATC | 9 cut(s) | 59, 193, 295, 470, 878, 1181, 1619, 1786, 1966 |
| BstMCI | CGRYCG | 2 cut(s) | 881, 1804 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 449, 1462 |
| BstNI | CCWGG | 2 cut(s) | 515, 1591 |
| BstNSI | RCATGY | 1 cut(s) | 676 |
| BstSCI | CCNGG | 2 cut(s) | 513, 1589 |
| BstSFI | CTRYAG | 3 cut(s) | 911, 1151, 1555 |
| BstUI | CGCG | 2 cut(s) | 615, 1730 |
| BstV1I | GCAGC | 3 cut(s) | 539, 1017, 1620 |
| BstX2I | RGATCY | 2 cut(s) | 295, 1786 |
| BstYI | RGATCY | 2 cut(s) | 295, 1786 |
| BstZ17I | GTATAC | 1 cut(s) | 341 |
| BsuRI | GGCC | 2 cut(s) | 266, 1958 |
| BtsCI | GGATG | 7 cut(s) | 356, 433, 477, 563, 708, 809, 1332 |
| BveI | ACCTGC | 1 cut(s) | 1984 |
| Cac8I | GCNNGC | 4 cut(s) | 670, 1121, 1862, 1927 |
| CfoI | GCGC | 3 cut(s) | 964, 1377, 1730 |
| Cfr10I | RCCGGY | 2 cut(s) | 1465, 1803 |
| Cfr13I | GGNCC | 2 cut(s) | 1560, 1956 |
| Csp6I | GTAC | 5 cut(s) | 742, 816, 1071, 1547, 1759 |
| CspAI | ACCGGT | 1 cut(s) | 1803 |
| CviAII | CATG | 7 cut(s) | 673, 722, 1080, 1372, 1538, 1756, 1960 |
| CviQI | GTAC | 5 cut(s) | 742, 816, 1071, 1547, 1759 |
| DdeI | CTNAG | 5 cut(s) | 54, 369, 1040, 1479, 1724 |
| DpnI | GATC | 9 cut(s) | 61, 195, 297, 472, 880, 1183, 1621, 1788, 1968 |
| DpnII | GATC | 9 cut(s) | 59, 193, 295, 470, 878, 1181, 1619, 1786, 1966 |
| DraI | TTTAAA | 2 cut(s) | 24, 940 |
| Eam1104I | CTCTTC | 4 cut(s) | 39, 305, 1620, 1663 |
| EarI | CTCTTC | 4 cut(s) | 39, 305, 1620, 1663 |
| Ecl136II | GAGCTC | 3 cut(s) | 734, 934, 1044 |
| Eco130I | CCWWGG | 1 cut(s) | 360 |
| Eco24I | GRGCYC | 3 cut(s) | 736, 936, 1046 |
| Eco31I | GGTCTC | 1 cut(s) | 1812 |
| Eco47I | GGWCC | 1 cut(s) | 1560 |
| Eco53kI | GAGCTC | 3 cut(s) | 734, 934, 1044 |
| Eco57I | CTGAAG | 1 cut(s) | 1335 |
| Eco88I | CYCGRG | 1 cut(s) | 1460 |
| EcoICRI | GAGCTC | 3 cut(s) | 734, 934, 1044 |
| EcoRII | CCWGG | 2 cut(s) | 513, 1589 |
| EcoT14I | CCWWGG | 1 cut(s) | 360 |
| EcoT22I | ATGCAT | 1 cut(s) | 1081 |
| EcoT38I | GRGCYC | 3 cut(s) | 736, 936, 1046 |
| ErhI | CCWWGG | 1 cut(s) | 360 |
| FaeI | CATG | 7 cut(s) | 676, 725, 1083, 1375, 1541, 1759, 1963 |
| FaqI | GGGAC | 3 cut(s) | 326, 593, 1263 |
| FatI | CATG | 7 cut(s) | 672, 721, 1079, 1371, 1537, 1755, 1959 |
| FblI | GTMKAC | 2 cut(s) | 340, 986 |
| Fnu4HI | GCNGC | 5 cut(s) | 553, 1031, 1609, 1858, 2002 |
| FokI | GGATG | 7 cut(s) | 343, 440, 464, 570, 695, 816, 1319 |
| FriOI | GRGCYC | 3 cut(s) | 736, 936, 1046 |
| Fsp4HI | GCNGC | 5 cut(s) | 553, 1031, 1609, 1858, 2002 |
| FspBI | CTAG | 7 cut(s) | 813, 977, 1242, 1257, 1920, 1926, 1994 |
| GlaI | GCGC | 3 cut(s) | 963, 1376, 1729 |
| GluI | GCNGC | 5 cut(s) | 553, 1031, 1609, 1858, 2002 |
| GsuI | CTGGAG | 2 cut(s) | 114, 198 |
| HaeIII | GGCC | 2 cut(s) | 266, 1958 |
| HapII | CCGG | 2 cut(s) | 1466, 1804 |
| HhaI | GCGC | 3 cut(s) | 964, 1377, 1730 |
| Hin1II | CATG | 7 cut(s) | 676, 725, 1083, 1375, 1541, 1759, 1963 |
| Hin6I | GCGC | 3 cut(s) | 962, 1375, 1728 |
| HinP1I | GCGC | 3 cut(s) | 962, 1375, 1728 |
| HincII | GTYRAC | 2 cut(s) | 809, 987 |
| HindII | GTYRAC | 2 cut(s) | 809, 987 |
| HinfI | GANTC | 1 cut(s) | 968 |
| HpaII | CCGG | 2 cut(s) | 1466, 1804 |
| HphI | GGTGA | 1 cut(s) | 1765 |
| Hpy166II | GTNNAC | 7 cut(s) | 341, 628, 678, 809, 833, 987, 1471 |
| Hpy8I | GTNNAC | 7 cut(s) | 341, 628, 678, 809, 833, 987, 1471 |
| Hpy99I | CGWCG | 3 cut(s) | 230, 840, 1857 |
| HpyAV | CCTTC | 6 cut(s) | 149, 256, 541, 1261, 1359, 1957 |
| HpyCH4III | ACNGT | 4 cut(s) | 1016, 1128, 1487, 1546 |
| HpyCH4IV | ACGT | 3 cut(s) | 646, 793, 1888 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 449, 1462 |
| HpyF3I | CTNAG | 5 cut(s) | 54, 369, 1040, 1479, 1724 |
| HpySE526I | ACGT | 3 cut(s) | 646, 793, 1888 |
| Hsp92II | CATG | 7 cut(s) | 676, 725, 1083, 1375, 1541, 1759, 1963 |
| HspAI | GCGC | 3 cut(s) | 962, 1375, 1728 |
| Kzo9I | GATC | 9 cut(s) | 59, 193, 295, 470, 878, 1181, 1619, 1786, 1966 |
| LguI | GCTCTTC | 2 cut(s) | 1620, 1663 |
| LmnI | GCTCC | 1 cut(s) | 731 |
| Lsp1109I | GCAGC | 3 cut(s) | 539, 1017, 1620 |
| LweI | GCATC | 3 cut(s) | 176, 949, 1652 |
| MaeI | CTAG | 7 cut(s) | 813, 977, 1242, 1257, 1920, 1926, 1994 |
| MaeII | ACGT | 3 cut(s) | 646, 793, 1888 |
| MaeIII | GTNAC | 4 cut(s) | 64, 285, 373, 794 |
| MalI | GATC | 9 cut(s) | 61, 195, 297, 472, 880, 1183, 1621, 1788, 1968 |
| MboI | GATC | 9 cut(s) | 59, 193, 295, 470, 878, 1181, 1619, 1786, 1966 |
| MfeI | CAATTG | 1 cut(s) | 1636 |
| MflI | RGATCY | 2 cut(s) | 295, 1786 |
| MhlI | GDGCHC | 6 cut(s) | 36, 736, 936, 1046, 1458, 1993 |
| MluI | ACGCGT | 1 cut(s) | 613 |
| MlyI | GAGTC | 1 cut(s) | 962 |
| MmeI | TCCRAC | 4 cut(s) | 888, 996, 1686, 1794 |
| Mph1103I | ATGCAT | 1 cut(s) | 1081 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1016, 1629 |
| MseI | TTAA | 8 cut(s) | 23, 108, 222, 660, 939, 1692, 1739, 1899 |
| MslI | CAYNNNNRTG | 1 cut(s) | 320 |
| MspI | CCGG | 2 cut(s) | 1466, 1804 |
| MspR9I | CCNGG | 2 cut(s) | 515, 1591 |
| MunI | CAATTG | 1 cut(s) | 1636 |
| MvaI | CCWGG | 2 cut(s) | 515, 1591 |
| MvnI | CGCG | 2 cut(s) | 615, 1730 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 449, 1462 |
| NdeII | GATC | 9 cut(s) | 59, 193, 295, 470, 878, 1181, 1619, 1786, 1966 |
| NheI | GCTAGC | 1 cut(s) | 1925 |
| NlaIII | CATG | 7 cut(s) | 676, 725, 1083, 1375, 1541, 1759, 1963 |
| NlaIV | GGNNCC | 2 cut(s) | 1588, 1788 |
| NmuCI | GTSAC | 2 cut(s) | 373, 794 |
| NsiI | ATGCAT | 1 cut(s) | 1081 |
| NspI | RCATGY | 1 cut(s) | 676 |
| NspV | TTCGAA | 1 cut(s) | 539 |
| PaeR7I | CTCGAG | 1 cut(s) | 1460 |
| PciSI | GCTCTTC | 2 cut(s) | 1620, 1663 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1016, 1629 |
| PinAI | ACCGGT | 1 cut(s) | 1803 |
| PkrI | GCNGC | 5 cut(s) | 554, 1032, 1610, 1859, 2003 |
| Ple19I | CGATCG | 1 cut(s) | 881 |
| PleI | GAGTC | 1 cut(s) | 962 |
| PpsI | GAGTC | 1 cut(s) | 962 |
| Psp124BI | GAGCTC | 3 cut(s) | 736, 936, 1046 |
| Psp6I | CCWGG | 2 cut(s) | 513, 1589 |
| PspGI | CCWGG | 2 cut(s) | 513, 1589 |
| PspN4I | GGNNCC | 2 cut(s) | 1588, 1788 |
| PspPI | GGNCC | 2 cut(s) | 1560, 1956 |
| PspXI | VCTCGAGB | 1 cut(s) | 1460 |
| PstI | CTGCAG | 1 cut(s) | 1155 |
| PsuI | RGATCY | 2 cut(s) | 295, 1786 |
| PvuI | CGATCG | 1 cut(s) | 881 |
| RsaI | GTAC | 5 cut(s) | 743, 817, 1072, 1548, 1760 |
| RsaNI | GTAC | 5 cut(s) | 742, 816, 1071, 1547, 1759 |
| RseI | CAYNNNNRTG | 1 cut(s) | 320 |
| SacI | GAGCTC | 3 cut(s) | 736, 936, 1046 |
| SalI | GTCGAC | 1 cut(s) | 985 |
| SapI | GCTCTTC | 2 cut(s) | 1620, 1663 |
| SaqAI | TTAA | 8 cut(s) | 23, 108, 222, 660, 939, 1692, 1739, 1899 |
| SatI | GCNGC | 5 cut(s) | 553, 1031, 1609, 1858, 2002 |
| Sau3AI | GATC | 9 cut(s) | 59, 193, 295, 470, 878, 1181, 1619, 1786, 1966 |
| Sau96I | GGNCC | 2 cut(s) | 1560, 1956 |
| SchI | GAGTC | 1 cut(s) | 962 |
| ScrFI | CCNGG | 2 cut(s) | 515, 1591 |
| SduI | GDGCHC | 6 cut(s) | 36, 736, 936, 1046, 1458, 1993 |
| SfaNI | GCATC | 3 cut(s) | 176, 949, 1652 |
| SfcI | CTRYAG | 3 cut(s) | 911, 1151, 1555 |
| Sfr274I | CTCGAG | 1 cut(s) | 1460 |
| SfuI | TTCGAA | 1 cut(s) | 539 |
| SinI | GGWCC | 1 cut(s) | 1560 |
| SlaI | CTCGAG | 1 cut(s) | 1460 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 320 |
| SmlI | CTYRAG | 4 cut(s) | 280, 1397, 1460, 1598 |
| SmoI | CTYRAG | 4 cut(s) | 280, 1397, 1460, 1598 |
| SsiI | CCGC | 3 cut(s) | 555, 1730, 1858 |
| SspMI | CTAG | 7 cut(s) | 813, 977, 1242, 1257, 1920, 1926, 1994 |
| SstI | GAGCTC | 3 cut(s) | 736, 936, 1046 |
| StyD4I | CCNGG | 2 cut(s) | 513, 1589 |
| StyI | CCWWGG | 1 cut(s) | 360 |
| TaaI | ACNGT | 4 cut(s) | 1016, 1128, 1487, 1546 |
| TaiI | ACGT | 3 cut(s) | 649, 796, 1891 |
| TaqI | TCGA | 8 cut(s) | 539, 877, 902, 986, 1461, 1679, 1710, 1800 |
| TatI | WGTACW | 2 cut(s) | 1546, 1758 |
| TauI | GCSGC | 1 cut(s) | 1860 |
| Tru1I | TTAA | 8 cut(s) | 23, 108, 222, 660, 939, 1692, 1739, 1899 |
| Tru9I | TTAA | 8 cut(s) | 23, 108, 222, 660, 939, 1692, 1739, 1899 |
| TseFI | GTSAC | 2 cut(s) | 373, 794 |
| TseI | GCWGC | 4 cut(s) | 552, 1030, 1608, 2001 |
| Tsp45I | GTSAC | 2 cut(s) | 373, 794 |
| TspDTI | ATGAA | 5 cut(s) | 560, 1220, 1276, 1519, 1976 |
| TspGWI | ACGGA | 3 cut(s) | 53, 1213, 1841 |
| VpaK11BI | GGWCC | 1 cut(s) | 1560 |
| XapI | RAATTY | 6 cut(s) | 114, 327, 941, 1004, 1216, 1768 |
| XbaI | TCTAGA | 1 cut(s) | 1241 |
| XceI | RCATGY | 1 cut(s) | 676 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 514 |
| XhoI | CTCGAG | 1 cut(s) | 1460 |
| XmiI | GTMKAC | 2 cut(s) | 340, 986 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1016, 1629 |
| XspI | CTAG | 7 cut(s) | 813, 977, 1242, 1257, 1920, 1926, 1994 |
| Zsp2I | ATGCAT | 1 cut(s) | 1081 |