Cyclic nucleotide-gated ion channel 1-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Ion_trans | PF00520 | 86 - 368 | 1.2e-09 | Ion transport protein |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 2 cut(s) | 843, 1372 |
| AccI | GTMKAC | 2 cut(s) | 333, 1697 |
| AccII | CGCG | 1 cut(s) | 512 |
| AccIII | TCCGGA | 2 cut(s) | 59, 1168 |
| AciI | CCGC | 4 cut(s) | 74, 473, 479, 1575 |
| AclI | AACGTT | 1 cut(s) | 30 |
| AclWI | GGATC | 6 cut(s) | 259, 272, 285, 1160, 1492, 1598 |
| AcsI | RAATTY | 4 cut(s) | 588, 820, 1078, 1195 |
| AcuI | CTGAAG | 1 cut(s) | 1714 |
| AfaI | GTAC | 5 cut(s) | 66, 666, 702, 719, 1727 |
| AflII | CTTAAG | 1 cut(s) | 1427 |
| AhlI | ACTAGT | 1 cut(s) | 998 |
| AjiI | CACGTC | 1 cut(s) | 782 |
| AjnI | CCWGG | 2 cut(s) | 775, 1500 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 269, 301 |
| Alw26I | GTCTC | 3 cut(s) | 92, 419, 620 |
| AlwI | GGATC | 6 cut(s) | 259, 272, 285, 1160, 1492, 1598 |
| Ama87I | CYCGRG | 1 cut(s) | 1671 |
| Aor13HI | TCCGGA | 2 cut(s) | 59, 1168 |
| AoxI | GGCC | 4 cut(s) | 75, 1048, 1650, 1783 |
| ApeKI | GCWGC | 8 cut(s) | 5, 52, 71, 571, 1028, 1405, 1720, 1811 |
| ApoI | RAATTY | 4 cut(s) | 588, 820, 1078, 1195 |
| AspS9I | GGNCC | 3 cut(s) | 76, 915, 1650 |
| AsuC2I | CCSGG | 1 cut(s) | 1649 |
| AsuII | TTCGAA | 1 cut(s) | 1220 |
| AvaI | CYCGRG | 1 cut(s) | 1671 |
| AvaII | GGWCC | 1 cut(s) | 915 |
| AxyI | CCTNAGG | 1 cut(s) | 1318 |
| BaeGI | GKGCMC | 1 cut(s) | 848 |
| BamHI | GGATCC | 1 cut(s) | 277 |
| BanI | GGYRCC | 2 cut(s) | 843, 1372 |
| BbvI | GCAGC | 7 cut(s) | 58, 64, 558, 1040, 1392, 1732, 1798 |
| BccI | CCATC | 4 cut(s) | 87, 380, 513, 1643 |
| BceAI | ACGGC | 1 cut(s) | 1698 |
| BciT130I | CCWGG | 2 cut(s) | 777, 1502 |
| BcnI | CCSGG | 1 cut(s) | 1649 |
| BcoDI | GTCTC | 3 cut(s) | 92, 419, 620 |
| BcuI | ACTAGT | 1 cut(s) | 998 |
| BfaI | CTAG | 3 cut(s) | 816, 999, 1781 |
| BfmI | CTRYAG | 1 cut(s) | 1701 |
| BfrI | CTTAAG | 1 cut(s) | 1427 |
| BisI | GCNGC | 9 cut(s) | 6, 53, 72, 75, 572, 1029, 1406, 1721, 1812 |
| BlsI | GCNGC | 9 cut(s) | 7, 54, 73, 76, 573, 1030, 1407, 1722, 1813 |
| BmcAI | AGTACT | 1 cut(s) | 1727 |
| Bme1390I | CCNGG | 3 cut(s) | 777, 1502, 1649 |
| Bme18I | GGWCC | 1 cut(s) | 915 |
| BmeT110I | CYCGRG | 1 cut(s) | 1671 |
| BmgBI | CACGTC | 1 cut(s) | 782 |
| BmgT120I | GGNCC | 3 cut(s) | 76, 915, 1650 |
| BmiI | GGNNCC | 5 cut(s) | 279, 845, 916, 1374, 1476 |
| BmrFI | CCNGG | 3 cut(s) | 777, 1502, 1649 |
| BmsI | GCATC | 6 cut(s) | 127, 606, 1432, 1536, 1553, 1607 |
| BpmI | CTGGAG | 1 cut(s) | 977 |
| Bpu10I | CCTNAGC | 1 cut(s) | 325 |
| Bpu14I | TTCGAA | 1 cut(s) | 1220 |
| BpuEI | CTTGAG | 2 cut(s) | 917, 991 |
| BpuMI | CCSGG | 1 cut(s) | 1649 |
| BsaJI | CCNNGG | 1 cut(s) | 1786 |
| BsaWI | WCCGGW | 2 cut(s) | 59, 1168 |
| Bse1I | ACTGG | 3 cut(s) | 201, 236, 755 |
| Bse21I | CCTNAGG | 1 cut(s) | 1318 |
| BseAI | TCCGGA | 2 cut(s) | 59, 1168 |
| BseBI | CCWGG | 2 cut(s) | 777, 1502 |
| BseDI | CCNNGG | 1 cut(s) | 1786 |
| BseGI | GGATG | 9 cut(s) | 79, 444, 524, 528, 684, 1206, 1288, 1294, 1399 |
| BseMII | CTCAG | 3 cut(s) | 102, 1332, 1819 |
| BseNI | ACTGG | 3 cut(s) | 201, 236, 755 |
| BseRI | GAGGAG | 1 cut(s) | 1578 |
| BseSI | GKGCMC | 1 cut(s) | 848 |
| BseXI | GCAGC | 7 cut(s) | 58, 64, 558, 1040, 1392, 1732, 1798 |
| BsgI | GTGCAG | 1 cut(s) | 1797 |
| Bsh1236I | CGCG | 1 cut(s) | 512 |
| BshFI | GGCC | 4 cut(s) | 77, 1050, 1652, 1785 |
| BshNI | GGYRCC | 2 cut(s) | 843, 1372 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1671 |
| BsiSI | CCGG | 3 cut(s) | 60, 1169, 1648 |
| BsmAI | GTCTC | 3 cut(s) | 92, 419, 620 |
| BsmBI | CGTCTC | 1 cut(s) | 419 |
| BsnI | GGCC | 4 cut(s) | 77, 1050, 1652, 1785 |
| BsoBI | CYCGRG | 1 cut(s) | 1671 |
| Bsp119I | TTCGAA | 1 cut(s) | 1220 |
| Bsp1286I | GDGCHC | 1 cut(s) | 848 |
| Bsp13I | TCCGGA | 2 cut(s) | 59, 1168 |
| Bsp143I | GATC | 7 cut(s) | 251, 277, 437, 1165, 1242, 1497, 1603 |
| BspACI | CCGC | 4 cut(s) | 74, 473, 479, 1575 |
| BspANI | GGCC | 4 cut(s) | 77, 1050, 1652, 1785 |
| BspCNI | CTCAG | 3 cut(s) | 101, 1331, 1818 |
| BspEI | TCCGGA | 2 cut(s) | 59, 1168 |
| BspFNI | CGCG | 1 cut(s) | 512 |
| BspHI | TCATGA | 2 cut(s) | 549, 1245 |
| BspLI | GGNNCC | 5 cut(s) | 279, 845, 916, 1374, 1476 |
| BspPI | GGATC | 6 cut(s) | 259, 272, 285, 1160, 1492, 1598 |
| BspT104I | TTCGAA | 1 cut(s) | 1220 |
| BspT107I | GGYRCC | 2 cut(s) | 843, 1372 |
| BspTI | CTTAAG | 1 cut(s) | 1427 |
| BsrI | ACTGG | 3 cut(s) | 201, 236, 755 |
| BssECI | CCNNGG | 1 cut(s) | 1786 |
| BssMI | GATC | 7 cut(s) | 251, 277, 437, 1165, 1242, 1497, 1603 |
| BssNAI | GTATAC | 1 cut(s) | 1698 |
| Bst1107I | GTATAC | 1 cut(s) | 1698 |
| Bst2UI | CCWGG | 2 cut(s) | 777, 1502 |
| Bst4CI | ACNGT | 6 cut(s) | 145, 1106, 1372, 1513, 1645, 1702 |
| Bst6I | CTCTTC | 3 cut(s) | 636, 1108, 1152 |
| BstAFI | CTTAAG | 1 cut(s) | 1427 |
| BstBI | TTCGAA | 1 cut(s) | 1220 |
| BstC8I | GCNNGC | 2 cut(s) | 264, 1052 |
| BstDEI | CTNAG | 4 cut(s) | 88, 325, 1318, 1805 |
| BstF5I | GGATG | 9 cut(s) | 79, 444, 524, 528, 684, 1206, 1288, 1294, 1399 |
| BstFNI | CGCG | 1 cut(s) | 512 |
| BstKTI | GATC | 7 cut(s) | 254, 280, 440, 1168, 1245, 1500, 1606 |
| BstMAI | GTCTC | 3 cut(s) | 92, 419, 620 |
| BstMBI | GATC | 7 cut(s) | 251, 277, 437, 1165, 1242, 1497, 1603 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 1429 |
| BstNI | CCWGG | 2 cut(s) | 777, 1502 |
| BstSCI | CCNGG | 3 cut(s) | 775, 1500, 1647 |
| BstSFI | CTRYAG | 1 cut(s) | 1701 |
| BstSLI | GKGCMC | 1 cut(s) | 848 |
| BstUI | CGCG | 1 cut(s) | 512 |
| BstV1I | GCAGC | 7 cut(s) | 58, 64, 558, 1040, 1392, 1732, 1798 |
| BstX2I | RGATCY | 3 cut(s) | 277, 1165, 1603 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 840 |
| BstYI | RGATCY | 3 cut(s) | 277, 1165, 1603 |
| BstZ17I | GTATAC | 1 cut(s) | 1698 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1318 |
| BsuRI | GGCC | 4 cut(s) | 77, 1050, 1652, 1785 |
| BtrI | CACGTC | 1 cut(s) | 782 |
| BtsCI | GGATG | 9 cut(s) | 79, 444, 524, 528, 684, 1206, 1288, 1294, 1399 |
| BtsI | GCAGTG | 1 cut(s) | 214 |
| BtsIMutI | CAGTG | 6 cut(s) | 120, 214, 229, 1111, 1738, 1814 |
| Cac8I | GCNNGC | 2 cut(s) | 264, 1052 |
| CciI | TCATGA | 2 cut(s) | 549, 1245 |
| Cfr13I | GGNCC | 3 cut(s) | 76, 915, 1650 |
| CseI | GACGC | 1 cut(s) | 1757 |
| Csp6I | GTAC | 5 cut(s) | 65, 665, 701, 718, 1726 |
| CviQI | GTAC | 5 cut(s) | 65, 665, 701, 718, 1726 |
| DdeI | CTNAG | 4 cut(s) | 88, 325, 1318, 1805 |
| DpnI | GATC | 7 cut(s) | 253, 279, 439, 1167, 1244, 1499, 1605 |
| DpnII | GATC | 7 cut(s) | 251, 277, 437, 1165, 1242, 1497, 1603 |
| Eam1104I | CTCTTC | 3 cut(s) | 636, 1108, 1152 |
| EarI | CTCTTC | 3 cut(s) | 636, 1108, 1152 |
| Eco147I | AGGCCT | 1 cut(s) | 1785 |
| Eco32I | GATATC | 1 cut(s) | 1300 |
| Eco47I | GGWCC | 1 cut(s) | 915 |
| Eco57I | CTGAAG | 1 cut(s) | 1714 |
| Eco81I | CCTNAGG | 1 cut(s) | 1318 |
| Eco88I | CYCGRG | 1 cut(s) | 1671 |
| EcoRI | GAATTC | 1 cut(s) | 588 |
| EcoRII | CCWGG | 2 cut(s) | 775, 1500 |
| EcoRV | GATATC | 1 cut(s) | 1300 |
| Esp3I | CGTCTC | 1 cut(s) | 419 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 615, 647 |
| FblI | GTMKAC | 2 cut(s) | 333, 1697 |
| Fnu4HI | GCNGC | 9 cut(s) | 6, 53, 72, 75, 572, 1029, 1406, 1721, 1812 |
| FokI | GGATG | 9 cut(s) | 66, 431, 531, 535, 671, 1193, 1295, 1301, 1406 |
| Fsp4HI | GCNGC | 9 cut(s) | 6, 53, 72, 75, 572, 1029, 1406, 1721, 1812 |
| FspBI | CTAG | 3 cut(s) | 816, 999, 1781 |
| GluI | GCNGC | 9 cut(s) | 6, 53, 72, 75, 572, 1029, 1406, 1721, 1812 |
| GsuI | CTGGAG | 1 cut(s) | 977 |
| HaeIII | GGCC | 4 cut(s) | 77, 1050, 1652, 1785 |
| HapII | CCGG | 3 cut(s) | 60, 1169, 1648 |
| HgaI | GACGC | 1 cut(s) | 1757 |
| HincII | GTYRAC | 2 cut(s) | 153, 334 |
| HindII | GTYRAC | 2 cut(s) | 153, 334 |
| HindIII | AAGCTT | 2 cut(s) | 1342, 1379 |
| HinfI | GANTC | 5 cut(s) | 86, 92, 628, 648, 899 |
| HpaII | CCGG | 3 cut(s) | 60, 1169, 1648 |
| Hpy166II | GTNNAC | 6 cut(s) | 153, 334, 397, 665, 767, 1698 |
| Hpy188I | TCNGA | 6 cut(s) | 46, 91, 97, 251, 1603, 1808 |
| Hpy8I | GTNNAC | 6 cut(s) | 153, 334, 397, 665, 767, 1698 |
| Hpy99I | CGWCG | 1 cut(s) | 1751 |
| HpyAV | CCTTC | 4 cut(s) | 112, 538, 1265, 1465 |
| HpyCH4III | ACNGT | 6 cut(s) | 145, 1106, 1372, 1513, 1645, 1702 |
| HpyCH4IV | ACGT | 3 cut(s) | 30, 367, 781 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 1429 |
| HpyF3I | CTNAG | 4 cut(s) | 88, 325, 1318, 1805 |
| HpySE526I | ACGT | 3 cut(s) | 30, 367, 781 |
| Kpn2I | TCCGGA | 2 cut(s) | 59, 1168 |
| Kzo9I | GATC | 7 cut(s) | 251, 277, 437, 1165, 1242, 1497, 1603 |
| LmnI | GCTCC | 2 cut(s) | 707, 1756 |
| Lsp1109I | GCAGC | 7 cut(s) | 58, 64, 558, 1040, 1392, 1732, 1798 |
| LweI | GCATC | 6 cut(s) | 127, 606, 1432, 1536, 1553, 1607 |
| MaeI | CTAG | 3 cut(s) | 816, 999, 1781 |
| MaeII | ACGT | 3 cut(s) | 30, 367, 781 |
| MaeIII | GTNAC | 7 cut(s) | 227, 363, 502, 746, 782, 1236, 1688 |
| MalI | GATC | 7 cut(s) | 253, 279, 439, 1167, 1244, 1499, 1605 |
| MboI | GATC | 7 cut(s) | 251, 277, 437, 1165, 1242, 1497, 1603 |
| MfeI | CAATTG | 1 cut(s) | 319 |
| MflI | RGATCY | 3 cut(s) | 277, 1165, 1603 |
| MhlI | GDGCHC | 1 cut(s) | 848 |
| MlyI | GAGTC | 4 cut(s) | 80, 622, 642, 908 |
| MmeI | TCCRAC | 2 cut(s) | 229, 1134 |
| MroI | TCCGGA | 2 cut(s) | 59, 1168 |
| MseI | TTAA | 8 cut(s) | 272, 488, 540, 621, 657, 798, 1428, 1773 |
| MspCI | CTTAAG | 1 cut(s) | 1427 |
| MspI | CCGG | 3 cut(s) | 60, 1169, 1648 |
| MspR9I | CCNGG | 3 cut(s) | 777, 1502, 1649 |
| MunI | CAATTG | 1 cut(s) | 319 |
| MvaI | CCWGG | 2 cut(s) | 777, 1502 |
| MvnI | CGCG | 1 cut(s) | 512 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 1429 |
| NciI | CCSGG | 1 cut(s) | 1649 |
| NdeII | GATC | 7 cut(s) | 251, 277, 437, 1165, 1242, 1497, 1603 |
| NlaIV | GGNNCC | 5 cut(s) | 279, 845, 916, 1374, 1476 |
| NmuCI | GTSAC | 5 cut(s) | 227, 363, 782, 1236, 1688 |
| NspV | TTCGAA | 1 cut(s) | 1220 |
| PagI | TCATGA | 2 cut(s) | 549, 1245 |
| PceI | AGGCCT | 1 cut(s) | 1785 |
| PfeI | GAWTC | 1 cut(s) | 92 |
| PfoI | TCCNGGA | 2 cut(s) | 775, 1500 |
| PkrI | GCNGC | 9 cut(s) | 7, 54, 73, 76, 573, 1030, 1407, 1722, 1813 |
| PleI | GAGTC | 4 cut(s) | 80, 622, 642, 907 |
| PpsI | GAGTC | 4 cut(s) | 80, 622, 642, 907 |
| Psp1406I | AACGTT | 1 cut(s) | 30 |
| Psp6I | CCWGG | 2 cut(s) | 775, 1500 |
| PspGI | CCWGG | 2 cut(s) | 775, 1500 |
| PspN4I | GGNNCC | 5 cut(s) | 279, 845, 916, 1374, 1476 |
| PspPI | GGNCC | 3 cut(s) | 76, 915, 1650 |
| PsuI | RGATCY | 3 cut(s) | 277, 1165, 1603 |
| RsaI | GTAC | 5 cut(s) | 66, 666, 702, 719, 1727 |
| RsaNI | GTAC | 5 cut(s) | 65, 665, 701, 718, 1726 |
| SalI | GTCGAC | 1 cut(s) | 332 |
| SaqAI | TTAA | 8 cut(s) | 272, 488, 540, 621, 657, 798, 1428, 1773 |
| SatI | GCNGC | 9 cut(s) | 6, 53, 72, 75, 572, 1029, 1406, 1721, 1812 |
| Sau3AI | GATC | 7 cut(s) | 251, 277, 437, 1165, 1242, 1497, 1603 |
| Sau96I | GGNCC | 3 cut(s) | 76, 915, 1650 |
| ScaI | AGTACT | 1 cut(s) | 1727 |
| SchI | GAGTC | 4 cut(s) | 80, 622, 642, 908 |
| ScrFI | CCNGG | 3 cut(s) | 777, 1502, 1649 |
| SduI | GDGCHC | 1 cut(s) | 848 |
| SfaNI | GCATC | 6 cut(s) | 127, 606, 1432, 1536, 1553, 1607 |
| SfcI | CTRYAG | 1 cut(s) | 1701 |
| SfuI | TTCGAA | 1 cut(s) | 1220 |
| SinI | GGWCC | 1 cut(s) | 915 |
| SmlI | CTYRAG | 3 cut(s) | 896, 970, 1427 |
| SmoI | CTYRAG | 3 cut(s) | 896, 970, 1427 |
| SpeI | ACTAGT | 1 cut(s) | 998 |
| SseBI | AGGCCT | 1 cut(s) | 1785 |
| SsiI | CCGC | 4 cut(s) | 74, 473, 479, 1575 |
| SspMI | CTAG | 3 cut(s) | 816, 999, 1781 |
| StuI | AGGCCT | 1 cut(s) | 1785 |
| StyD4I | CCNGG | 3 cut(s) | 775, 1500, 1647 |
| TaaI | ACNGT | 6 cut(s) | 145, 1106, 1372, 1513, 1645, 1702 |
| TaiI | ACGT | 3 cut(s) | 33, 370, 784 |
| TaqI | TCGA | 6 cut(s) | 15, 333, 1220, 1465, 1665, 1746 |
| TatI | WGTACW | 4 cut(s) | 64, 664, 700, 1725 |
| TauI | GCSGC | 1 cut(s) | 77 |
| TfiI | GAWTC | 1 cut(s) | 92 |
| Tru1I | TTAA | 8 cut(s) | 272, 488, 540, 621, 657, 798, 1428, 1773 |
| Tru9I | TTAA | 8 cut(s) | 272, 488, 540, 621, 657, 798, 1428, 1773 |
| TscAI | CASTG | 6 cut(s) | 120, 221, 236, 1111, 1738, 1821 |
| TseFI | GTSAC | 5 cut(s) | 227, 363, 782, 1236, 1688 |
| TseI | GCWGC | 8 cut(s) | 5, 52, 71, 571, 1028, 1405, 1720, 1811 |
| Tsp45I | GTSAC | 5 cut(s) | 227, 363, 782, 1236, 1688 |
| TspDTI | ATGAA | 5 cut(s) | 569, 623, 750, 1195, 1670 |
| TspGWI | ACGGA | 2 cut(s) | 392, 1521 |
| TspRI | CASTG | 6 cut(s) | 120, 221, 236, 1111, 1738, 1821 |
| Vha464I | CTTAAG | 1 cut(s) | 1427 |
| VpaK11BI | GGWCC | 1 cut(s) | 915 |
| XapI | RAATTY | 4 cut(s) | 588, 820, 1078, 1195 |
| XbaI | TCTAGA | 1 cut(s) | 815 |
| XmiI | GTMKAC | 2 cut(s) | 333, 1697 |
| XspI | CTAG | 3 cut(s) | 816, 999, 1781 |
| ZrmI | AGTACT | 1 cut(s) | 1727 |