Rw0G020310

Cyclic nucleotide-gated ion channel 1-like

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Contig00914
Physical Location & Seq
Forward (+)
39156 .. 43562
4407 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw0G020310.1

Sequence Viewer

Length: 1971 bp
ATGAAGGACGTCAGTAATCATTCATTTGTGATGGAAACTATTTTGGAACATTGGGTTGATCAAGGACCTGCCAGAGAAAAAGGATATGAGGAAAGGAATCATAGGATAAAGGAAATCCTTGACCCGCAGGGATCATTCCTACCAATGTGGAATAGGATATTTGCAGTGTTCTGTGTGTTTGCTGTGTTACTAGATCCTTTGTTCTTTTACATTCCTATCATTCATGCTGATCTGAAGTGCCTCGGATTTGATACAAGAATGAAAAAAATAGCTCTTGTGTCAAGATCCGTCACAGATTTCTTTTACATGGTGGATATTATACTTCAAATTTGCACTCGACTTTATGCTGGAAGATATAAGGCTTCCTGGATATCAACATTGGACCAGGTAATTGTACCTACTAATGGTAAAGAATCGGCTGCGGAAGCTTTATCATTCGCTAAGAGGAACTCGCTGTTATACATTCTTATAGACATCATTGCTCTTCTTCCCCTGCCACAGGCGGTGATTTTCATTTTCTTTCCAAAACTAATCAGGAGCTCAGAATCTATGATTACAAGGATAATTCTGAACTGCTGTGTTTTATTACAATTTGTTCCACGTGTTCTTCGCATCTACCTATCGGGTGATGTCCTTACCATTGATGCTAGAAGTGGAATATGGATTAAAGGTGTATTCGACTTTTTTCCTTTCATCCTTGCTGGTCATGTATTTGGGGCTATGTGGTACTTTTTTGCTGTTCAACGAGAAGCAACTTGTTGGGAAAAAGCTTGTCAAAGTAAAAATGGATGTCAACCTATAAGTTTTGATTGTGATAGCAATGAGTTCAGAAATATTACACTTTTGAACGACTTATGCCCTATAAATCCACAAAATGCTACGCTCTTTGATTTCGGTATATTTCTTGATGCTATTCAGTCTGGTATGTTGGAGTCAACCGACTTTCCACAAAAATGGTTCCAGTGCTTTTGGTGGGGTTTACGAAATTTGAGCTCTTTTGGATCAAACCTTCAGCCGAGCCCTTATGCATTGGAAAACTTCTTCGCAGTTTTCATTTCTATAAGTGGCATGCTACTATTTTTAATATATTTGAATGCAAATTTGCAGACATATGTACAGCTGGAAGCAAAAAGATCAGAGCTGCTTAAACTGAAAAAGAAGATGCAAAAGATAAATCCTGAGATAGATTTGTGGTTACATAAGAACGGCCTCTCTAGATCTAATGATGAAAAGCGAAATCAGAGTCTAAATCATCTGAAAAAGCTGATCATGAAAAACGTACAGCAAAACCTTGAAGAAAACAAACATGTTGAGGTGGAGAATATCCTTTCTATTCTTCCCTTCAGCGACAGAATGCATATCATGCGGCATCTCCGTTTGAATTCGTTAAAGAAAGTGTCAATGTTTAAAGATATTGACGAGCGTGCATTAAAAGTAATTTCTCAATACCTTAAGCGAGTAATCTATGCTCCGGACACCTATATTATTCGAGAAGGAGAACCACTTGACAAGATGCTCTTCATCACACAAGGCACAGTATGGACCTACATAACAAGTAATGGACGTTATGGTCCCTCGAACACCACGTCCCTTGGCAAAGGTGATGTTTATGGAGCAAAACTTCTATTAGATTGGGCATTCAAAGATGAGTTCTCCCTTCCTGAGTTACCTATTTCACCTGCTATTGTCAAGTCCCAAACGAAAGTGGAAGGATTTATCATCAGGGCCAACGACTTGAAGTATGTTGTGTCTAAACCACAAATTTGGTGGTATTTTAAAGAGATGCTGATCCCTTCTTCTAAGTTGGAGGTGGTGTGTCGTCTCAAGGCAACTAGTTGCTTACAAGCAGCTTGGCGCCAATACCAATCAAGGGTTAGGGGGAAAAGTATAGCGGATGGGATAATTTCTTTGGACCATATAGTCACTTGTCAAAACAGAGAGTGGAATTCTGTTCTTGCCCCTTCTTGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

656

Amino Acids

75.67

Weight (kDa)

8.94

Isoelectric Point (pI)

41.64

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000017)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07351 FvH4_1g11800 FvH4_1g11800 FvH4_1g11800 FvH4_1g11800 FvH4_1g11800 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_4g14360 FvH4_6g13561 FvH4_6g13562 FvH4_6g13580 FvH4_6g13590 FvH4_6g13590 FvH4_6g13590 FvH4_6g13731 FvH4_6g13770 FvH4_6g13800 FvH4_6g13800 FvH4_6g13860 FvH4_6g13870 FvH4_6g13870 FvH4_6g13870 FvH4_6g13870 FvH4_6g13870 FvH4_6g13890 FvH4_6g33801 FvH4_7g13020 FvH4_7g13270 FvH4_7g13270 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g14580 FvH4_7g14580 FvH4_7g14580 FvH4_7g14600 FvH4_7g14600 FvH4_7g20030 FvH4_7g20510 FvH4_7g20510 FvH4_7g20510 FvH4_7g20670 FvH4_7g20670 FvH4_7g20670 FvH4_7g20670 FvH4_7g20690 FvH4_7g20690 FvH4_7g31930 FvH4_7g31930 FvH4_7g31940 FvH4_7g31940
malus_domestica MD01G1115700.v1.1 MD01G1115800.v1.1 MD01G1116600.v1.1 MD01G1116700.v1.1 MD01G1117000.v1.1 MD01G1225000.v1.1 MD02G1077900.v1.1 MD02G1078000.v1.1 MD02G1078200.v1.1 MD02G1078400.v1.1 MD02G1084300.v1.1 MD04G1004700.v1.1 MD04G1123100.v1.1 MD04G1123200.v1.1 MD04G1128000.v1.1 MD04G1128400.v1.1 MD05G1299700.v1.1 MD05G1300000.v1.1 MD07G1184000.v1.1 MD07G1292300.v1.1 MD08G1214800.v1.1
prunus_persica Prupe.1G205100_v2.0.a1 Prupe.1G205100_v2.0.a1 Prupe.1G205200_v2.0.a1 Prupe.2G222300_v2.0.a1 Prupe.2G223300_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223600_v2.0.a1 Prupe.2G223600_v2.0.a1 Prupe.2G223600_v2.0.a1 Prupe.2G223700_v2.0.a1 Prupe.2G223700_v2.0.a1 Prupe.2G223700_v2.0.a1 Prupe.2G223700_v2.0.a1 Prupe.2G223800_v2.0.a1 Prupe.2G223900_v2.0.a1 Prupe.2G224000_v2.0.a1 Prupe.5G162000_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G291000_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G210400_v2.0.a1 Prupe.7G210600_v2.0.a1 Prupe.7G210700_v2.0.a1 Prupe.7G210800_v2.0.a1 Prupe.7G210900_v2.0.a1 Prupe.8G097600_v2.0.a1 Prupe.8G097800_v2.0.a1 Prupe.8G097800_v2.0.a1
pyrus_communis pycom01g14430 pycom01g14440 pycom01g23130 pycom01g23160 pycom01g23330 pycom02g06210 pycom02g06220 pycom02g06250 pycom02g06270 pycom02g06710 pycom03g05360 pycom03g05380 pycom04g11470 pycom04g11480 pycom04g11520 pycom04g11560 pycom04g11600 pycom04g11610 pycom04g11650 pycom04g11660 pycom04g11670 pycom05g27790 pycom07g17630 pycom08g20960 pycom126g00020 pycom126g00030
rosa_chinensis RchiOBHm_Chr1g0318251 RchiOBHm_Chr1g0318731 RchiOBHm_Chr1g0339101 RchiOBHm_Chr1g0339111 RchiOBHm_Chr1g0347151 RchiOBHm_Chr1g0347161 RchiOBHm_Chr1g0347221 RchiOBHm_Chr1g0352401 RchiOBHm_Chr1g0352441 RchiOBHm_Chr1g0352461 RchiOBHm_Chr1g0356131 RchiOBHm_Chr1g0363991 RchiOBHm_Chr1g0364791 RchiOBHm_Chr1g0364801 RchiOBHm_Chr1g0364811 RchiOBHm_Chr1g0364851 RchiOBHm_Chr1g0364951 RchiOBHm_Chr1g0370821 RchiOBHm_Chr1g0381221 RchiOBHm_Chr1g0381231 RchiOBHm_Chr1g0381261 RchiOBHm_Chr1g0381271 RchiOBHm_Chr1g0381341 RchiOBHm_Chr1g0381351 RchiOBHm_Chr1g0381391 RchiOBHm_Chr1g0381801 RchiOBHm_Chr1g0381821 RchiOBHm_Chr2g0093241 RchiOBHm_Chr2g0116391 RchiOBHm_Chr3g0466441 RchiOBHm_Chr3g0466631 RchiOBHm_Chr3g0466651 RchiOBHm_Chr3g0496921 RchiOBHm_Chr4g0400441 RchiOBHm_Chr4g0400501 RchiOBHm_Chr4g0400511 RchiOBHm_Chr4g0400691 RchiOBHm_Chr4g0400701 RchiOBHm_Chr4g0404331 RchiOBHm_Chr5g0052101 RchiOBHm_Chr5g0052111 RchiOBHm_Chr5g0052171 RchiOBHm_Chr5g0052181 RchiOBHm_Chr6g0264161 RchiOBHm_Chr6g0265551 RchiOBHm_Chr7g0213571 RchiOBHm_Chr7g0213581
rosa_laevigata RLG00000002796 RLG00000003261 RLG00000007935 RLG00000007936 RLG00000009187 RLG00000014179 RLG00000016381 RLG00000018265 RLG00000024558 RLG00000024574 RLG00000026232 RLG00000026234 RLG00000026236 RLG00000026237 RLG00000027459 RLG00000027461 RLG00000027463 RLG00000027530 RLG00000028103 RLG00000028304 RLG00000028333 RLG00000029214 RLG00000029848 RLG00000029951 RLG00000030115 RLG00000030552 RLG00000033668 RLG00000034840 RLG00000034841 RLG00000034842 RLG00000035830
rosa_multiflora Rmu_sc0000654.1_g000004 Rmu_sc0000675.1_g000025 Rmu_sc0001075.1_g000002 Rmu_sc0001726.1_g000004 Rmu_sc0001772.1_g000061 Rmu_sc0001772.1_g000065 Rmu_sc0002067.1_g000002 Rmu_sc0002183.1_g000001 Rmu_sc0002183.1_g000006 Rmu_sc0002244.1_g000003 Rmu_sc0002313.1_g000004 Rmu_sc0002319.1_g000004 Rmu_sc0002539.1_g000085 Rmu_sc0002636.1_g000004 Rmu_sc0003229.1_g000007 Rmu_sc0003313.1_g000020 Rmu_sc0003546.1_g000007 Rmu_sc0003724.1_g000015 Rmu_sc0003936.1_g000029 Rmu_sc0004191.1_g000067 Rmu_sc0004525.1_g000012 Rmu_sc0005122.1_g000009 Rmu_sc0005255.1_g000040 Rmu_sc0005338.1_g000016 Rmu_sc0005584.1_g000008 Rmu_sc0006460.1_g000013 Rmu_sc0006872.1_g000011 Rmu_sc0006872.1_g000015 Rmu_sc0006872.1_g000016 Rmu_sc0006952.1_g000013 Rmu_sc0007342.1_g000005 Rmu_sc0007342.1_g000006 Rmu_sc0008418.1_g000003 Rmu_sc0008418.1_g000006 Rmu_sc0008636.1_g000007 Rmu_sc0008636.1_g000008 Rmu_sc0009205.1_g000014 Rmu_sc0009365.1_g000014 Rmu_sc0009917.1_g000002 Rmu_sc0019289.1_g000003 Rmu_ssc0000098.1_g000011 Rmu_ssc0000098.1_g000012 Rmu_ssc0000167.1_g000018 Rmu_ssc0000167.1_g000024 Rmu_ssc0000326.1_g000015
rosa_roxburghii Rroxscaffold_166G00440780 Rroxscaffold_176G00431500 Rroxscaffold_1G00015080 Rroxscaffold_1G00027880 Rroxscaffold_1G00027890 Rroxscaffold_1G00027920 Rroxscaffold_2G00127250 Rroxscaffold_2G00148380 Rroxscaffold_3G00219450 Rroxscaffold_3G00232170 Rroxscaffold_3G00232210 Rroxscaffold_3G00242230 Rroxscaffold_3G00242240 Rroxscaffold_3G00244790 Rroxscaffold_3G00245790 Rroxscaffold_4G00278400 Rroxscaffold_4G00278430 Rroxscaffold_4G00278670 Rroxscaffold_4G00278680 Rroxscaffold_4G00278690 Rroxscaffold_4G00278700 Rroxscaffold_4G00278720 Rroxscaffold_4G00291690 Rroxscaffold_4G00292070 Rroxscaffold_4G00292090 Rroxscaffold_4G00292770 Rroxscaffold_4G00302240 Rroxscaffold_4G00302860 Rroxscaffold_4G00311320 Rroxscaffold_4G00311330 Rroxscaffold_4G00320570 Rroxscaffold_4G00322050 Rroxscaffold_4G00329480 Rroxscaffold_4G00329730 Rroxscaffold_5G00345500 Rroxscaffold_5G00345510 Rroxscaffold_5G00360830 Rroxscaffold_5G00360840 Rroxscaffold_6G00393450 Rroxscaffold_6G00404030 Rroxscaffold_6G00414220 Rroxscaffold_6G00414230 Rroxscaffold_6G00414280 Rroxscaffold_6G00414290 Rroxscaffold_6G00414350 Rroxscaffold_6G00414470 Rroxscaffold_7G00202570 Rroxscaffold_7G00203460 Rroxscaffold_7G00203470
rosa_rugosa Rorug01G0020500 Rorug01G0020600 Rorug01G0020700 Rorug01G0143700.1 Rorug01G0225700 Rorug01G0228500 Rorug01G0228600 Rorug01G0228600 Rorug01G0228700 Rorug01G0228800 Rorug01G0228800 Rorug01G0229000 Rorug01G0229300 Rorug01G0229400 Rorug01G0229600 Rorug01G0229700 Rorug01G0232200 Rorug01G0232600 Rorug01G0232600 Rorug01G0311900 Rorug01G0311900 Rorug01G0318400 Rorug01G0318500 Rorug01G0318500 Rorug01G0318500 Rorug01G0427900 Rorug01G0427900 Rorug01G0428000 Rorug01G0428200 Rorug01G0428300 Rorug01G0428400 Rorug01G0431500 Rorug01G0431600 Rorug01G0431600 Rorug02G0033800 Rorug02G0206300 Rorug03G0081900 Rorug03G0083200 Rorug03G0083200 Rorug03G0083300 Rorug04G0025100 Rorug04G0025100 Rorug04G0025200 Rorug04G0025300 Rorug04G0058600 Rorug04G0058700 Rorug04G0058800 Rorug04G0098400 Rorug04G0098500 Rorug05G0274500 Rorug05G0274600 Rorug05G0274800 Rorug06G0008500 Rorug06G0009100 Rorug06G0018000
rosa_samantha Rh1AG031700 Rh1AG036100 Rh1AG089800 Rh1AG239800 Rh1AG239900 Rh1AG242000 Rh1AG242300 Rh1AG245600 Rh1AG262600 Rh1AG319700 Rh1AG319800 Rh1AG319900 Rh1AG327200 Rh1AG451100 Rh1AG451200 Rh1AG451300 Rh1AG451600 Rh1AG451700 Rh1BG027200 Rh1BG071600 Rh1BG090700 Rh1BG211000 Rh1BG213000 Rh1BG213500 Rh1BG282800 Rh1BG288400 Rh1BG408100 Rh1BG408200 Rh1BG408400 Rh1BG408700 Rh1CG026300 Rh1CG028300 Rh1CG224100 Rh1CG226000 Rh1CG226100 Rh1CG229300 Rh1CG229400 Rh1CG245900 Rh1CG299200 Rh1CG299400 Rh1CG299500 Rh1CG303300 Rh1CG305100 Rh1CG422500 Rh1CG422600 Rh1CG422700 Rh1CG422800 Rh1CG422900 Rh1CG423100 Rh1CG423300 Rh1CG423400 Rh1CG426300 Rh1CG426600 Rh1DG239300 Rh1DG239600 Rh1DG258300 Rh1DG314200 Rh1DG314300 Rh1DG314400 Rh1DG320000 Rh1DG439200 Rh1DG439400 Rh1DG439500 Rh1DG439700 Rh1DG440000 Rh1DG443800 Rh2AG261800 Rh2BG080900 Rh2CG083300 Rh2DG078900 Rh2DG270000 Rh2DG270100 Rh3AG128400 Rh3AG130100 Rh3AG130500 Rh3AG332500 Rh3AG332600 Rh3AG332800 Rh3BG149700 Rh3BG151500 Rh3CG151400 Rh3CG354500 Rh3CG366800 Rh3DG150500 Rh3DG152200 Rh4AG101400 Rh4AG102900 Rh4AG148300 Rh4AG148600 Rh4BG098000 Rh4CG111100 Rh4CG111300 Rh4CG155100 Rh4DG094800 Rh5AG213600 Rh5AG346900 Rh5AG347000 Rh5BG357500 Rh5BG357700 Rh5BG485400 Rh5CG383100 Rh5CG383200 Rh5CG383300 Rh5CG509900 Rh5DG373000 Rh5DG373200 Rh6BG054300 Rh6BG126300 Rh6CG125100 Rh6CG185300 Rh6DG177000 Rh7AG276100 Rh7AG276200 Rh7BG230500 Rh7BG270500 Rh7BG364000 Rh7CG250100 Rh7CG295200 Rh7CG295300 Rh7DG389700
rosa_wichuraiana Rw0G001190 Rw0G010680 Rw0G013360 Rw0G014310 Rw0G014890 Rw0G020310 Rw0G021350 Rw0G022510 Rw1G003360 Rw1G004330 Rw1G006930 Rw1G008310 Rw1G021090 Rw1G021150 Rw1G021210 Rw1G023200 Rw1G023210 Rw1G028340 Rw1G028350 Rw1G028990 Rw1G032510 Rw1G039370 Rw1G039400 Rw1G039410 Rw1G039420 Rw1G039430 Rw2G006700 Rw2G020550 Rw2G020580 Rw3G012130 Rw3G012300 Rw3G012310 Rw3G028220 Rw3G029230 Rw5G021600 Rw5G032790 Rw6G011240 Rw7G027670 Rw7G032780

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1687
AasI GACNNNNNNGTC 2 cut(s) 1569, 1919
AatII GACGTC 1 cut(s) 12
Acc36I ACCTGC 2 cut(s) 76, 1687
AccB1I GGYRCC 1 cut(s) 1854
AccIII TCCGGA 1 cut(s) 1471
AciI CCGC 5 cut(s) 125, 422, 503, 1366, 1892
AclWI GGATC 5 cut(s) 139, 188, 279, 1009, 1783
AcsI RAATTY 6 cut(s) 327, 985, 1099, 1381, 1761, 1945
AcuI CTGAAG 3 cut(s) 254, 995, 1327
AcvI CACGTG 1 cut(s) 602
AcyI GRCGYC 2 cut(s) 9, 1855
AfaI GTAC 4 cut(s) 396, 728, 1116, 1281
AfiI CCNNNNNNNGG 3 cut(s) 404, 499, 1870
AflII CTTAAG 1 cut(s) 1451
AflIII ACRYGT 2 cut(s) 601, 1306
AgsI TTSAA 8 cut(s) 326, 743, 847, 1093, 1295, 1381, 1642, 1738
AhlI ACTAGT 1 cut(s) 1832
AjiI CACGTC 1 cut(s) 1587
AjnI CCWGG 2 cut(s) 365, 384
AloI GAACNNNNNNTCC 2 cut(s) 1571, 1603
AluBI AGCT 9 cut(s) 272, 428, 540, 770, 993, 1120, 1141, 1264, 1850
AluI AGCT 9 cut(s) 272, 428, 540, 770, 993, 1120, 1141, 1264, 1850
Alw21I GWGCWC 2 cut(s) 542, 995
Alw26I GTCTC 1 cut(s) 1826
AlwI GGATC 5 cut(s) 139, 188, 279, 1009, 1783
Aor13HI TCCGGA 1 cut(s) 1471
AoxI GGCC 2 cut(s) 1207, 1725
ApeKI GCWGC 3 cut(s) 419, 1141, 1847
ApoI RAATTY 6 cut(s) 327, 985, 1099, 1381, 1761, 1945
ArsI GACNNNNNNTTYG 4 cut(s) 1228, 1260, 1571, 1603
AspLEI GCGC 1 cut(s) 1857
AspS9I GGNCC 6 cut(s) 65, 382, 1542, 1571, 1725, 1912
AsuHPI GGTGA 4 cut(s) 517, 638, 1613, 1668
AvaII GGWCC 5 cut(s) 65, 382, 1542, 1571, 1912
BanI GGYRCC 1 cut(s) 1854
BanII GRGCYC 3 cut(s) 542, 995, 1022
BbrPI CACGTG 1 cut(s) 602
Bbv12I GWGCWC 2 cut(s) 542, 995
BbvI GCAGC 3 cut(s) 406, 1128, 1859
BccI CCATC 2 cut(s) 25, 1889
BceAI ACGGC 1 cut(s) 1222
BciT130I CCWGG 2 cut(s) 367, 386
BclI TGATCA 2 cut(s) 58, 1266
BcoDI GTCTC 1 cut(s) 1826
BcuI ACTAGT 1 cut(s) 1832
BfaI CTAG 4 cut(s) 191, 648, 1215, 1833
BfoI RGCGCY 1 cut(s) 1858
BfrI CTTAAG 1 cut(s) 1451
BfuAI ACCTGC 2 cut(s) 76, 1687
BglII AGATCT 1 cut(s) 1217
BisI GCNGC 4 cut(s) 420, 1142, 1367, 1848
BlsI GCNGC 4 cut(s) 421, 1143, 1368, 1849
Bme1390I CCNGG 2 cut(s) 367, 386
Bme18I GGWCC 5 cut(s) 65, 382, 1542, 1571, 1912
BmgBI CACGTC 1 cut(s) 1587
BmgT120I GGNCC 6 cut(s) 65, 382, 1542, 1571, 1725, 1912
BmiI GGNNCC 3 cut(s) 959, 1573, 1856
BmrFI CCNGG 2 cut(s) 367, 386
BmsI GCATC 7 cut(s) 621, 634, 898, 1152, 1378, 1503, 1773
BpuEI CTTGAG 1 cut(s) 1808
BsaAI YACGTR 1 cut(s) 602
BsaBI GATNNNNATC 1 cut(s) 1787
BsaHI GRCGYC 2 cut(s) 9, 1855
BsaJI CCNNGG 2 cut(s) 241, 1591
BsaWI WCCGGW 1 cut(s) 1471
BsaXI ACNNNNNCTCC 2 cut(s) 1799, 1829
Bsc4I CCNNNNNNNGG 3 cut(s) 404, 499, 1870
Bse1I ACTGG 1 cut(s) 961
Bse3DI GCAATG 2 cut(s) 477, 826
Bse8I GATNNNNATC 1 cut(s) 1787
BseAI TCCGGA 1 cut(s) 1471
BseBI CCWGG 2 cut(s) 367, 386
BseDI CCNNGG 2 cut(s) 241, 1591
BseGI GGATG 3 cut(s) 693, 794, 1900
BseJI GATNNNNATC 1 cut(s) 1787
BseLI CCNNNNNNNGG 3 cut(s) 404, 499, 1870
BseMI GCAATG 2 cut(s) 477, 826
BseMII CTCAG 3 cut(s) 555, 1170, 1653
BseNI ACTGG 1 cut(s) 961
BseXI GCAGC 3 cut(s) 406, 1128, 1859
BshFI GGCC 2 cut(s) 1209, 1727
BshNI GGYRCC 1 cut(s) 1854
BsiHKAI GWGCWC 2 cut(s) 542, 995
BsiSI CCGG 1 cut(s) 1472
BslFI GGGAC 3 cut(s) 1557, 1573, 1678
BslI CCNNNNNNNGG 3 cut(s) 404, 499, 1870
BsmAI GTCTC 1 cut(s) 1826
BsmBI CGTCTC 1 cut(s) 1826
BsmFI GGGAC 3 cut(s) 1557, 1573, 1678
BsmI GAATGC 3 cut(s) 1099, 1359, 1637
BsnI GGCC 2 cut(s) 1209, 1727
Bsp1286I GDGCHC 3 cut(s) 542, 995, 1022
Bsp13I TCCGGA 1 cut(s) 1471
Bsp1407I TGTACA 1 cut(s) 1114
BspACI CCGC 5 cut(s) 125, 422, 503, 1366, 1892
BspANI GGCC 2 cut(s) 1209, 1727
BspCNI CTCAG 3 cut(s) 554, 1171, 1654
BspEI TCCGGA 1 cut(s) 1471
BspHI TCATGA 1 cut(s) 1269
BspLI GGNNCC 3 cut(s) 959, 1573, 1856
BspMI ACCTGC 2 cut(s) 76, 1687
BspPI GGATC 5 cut(s) 139, 188, 279, 1009, 1783
BspQI GCTCTTC 2 cut(s) 489, 1523
BspT107I GGYRCC 1 cut(s) 1854
BspTI CTTAAG 1 cut(s) 1451
BsrDI GCAATG 2 cut(s) 477, 826
BsrGI TGTACA 1 cut(s) 1114
BsrI ACTGG 1 cut(s) 961
BssECI CCNNGG 2 cut(s) 241, 1591
BssNI GRCGYC 2 cut(s) 9, 1855
BssT1I CCWWGG 1 cut(s) 1591
Bst2UI CCWGG 2 cut(s) 367, 386
Bst4CI ACNGT 1 cut(s) 1537
Bst6I CTCTTC 2 cut(s) 489, 1523
BstACI GRCGYC 2 cut(s) 9, 1855
BstAFI CTTAAG 1 cut(s) 1451
BstAPI GCANNNNNTGC 1 cut(s) 1363
BstAUI TGTACA 1 cut(s) 1114
BstBAI YACGTR 1 cut(s) 602
BstC8I GCNNGC 2 cut(s) 1070, 1425
BstDEI CTNAG 5 cut(s) 441, 541, 1179, 1662, 1800
BstENI CCTNNNNNAGG 1 cut(s) 497
BstF5I GGATG 3 cut(s) 693, 794, 1900
BstH2I RGCGCY 1 cut(s) 1858
BstHHI GCGC 1 cut(s) 1857
BstMAI GTCTC 1 cut(s) 1826
BstMWI GCNNNNNNNGC 2 cut(s) 425, 1363
BstNI CCWGG 2 cut(s) 367, 386
BstNSI RCATGY 2 cut(s) 1072, 1310
BstSCI CCNGG 2 cut(s) 365, 384
BstV1I GCAGC 3 cut(s) 406, 1128, 1859
BstX2I RGATCY 3 cut(s) 193, 284, 1217
BstXI CCANNNNNNTGG 2 cut(s) 954, 1764
BstYI RGATCY 3 cut(s) 193, 284, 1217
BsuRI GGCC 2 cut(s) 1209, 1727
BtrI CACGTC 1 cut(s) 1587
BtsCI GGATG 3 cut(s) 693, 794, 1900
BtsI GCAGTG 1 cut(s) 171
BtsIMutI CAGTG 2 cut(s) 171, 968
BveI ACCTGC 2 cut(s) 76, 1687
Cac8I GCNNGC 2 cut(s) 1070, 1425
CciI TCATGA 1 cut(s) 1269
CfoI GCGC 1 cut(s) 1857
Cfr13I GGNCC 6 cut(s) 65, 382, 1542, 1571, 1725, 1912
CsiI ACCWGGT 1 cut(s) 384
Csp6I GTAC 4 cut(s) 395, 727, 1115, 1280
CspCI CAANNNNNGTGG 4 cut(s) 1573, 1608, 1748, 1783
CviAII CATG 7 cut(s) 224, 307, 707, 1069, 1270, 1307, 1363
CviQI GTAC 4 cut(s) 395, 727, 1115, 1280
DdeI CTNAG 5 cut(s) 441, 541, 1179, 1662, 1800
DinI GGCGCC 1 cut(s) 1856
DraI TTTAAA 2 cut(s) 1408, 1777
DrdI GACNNNNNNGTC 2 cut(s) 1569, 1919
DseDI GACNNNNNNGTC 2 cut(s) 1569, 1919
Eam1104I CTCTTC 2 cut(s) 489, 1523
EarI CTCTTC 2 cut(s) 489, 1523
Ecl136II GAGCTC 2 cut(s) 540, 993
Eco130I CCWWGG 1 cut(s) 1591
Eco24I GRGCYC 3 cut(s) 542, 995, 1022
Eco32I GATATC 1 cut(s) 372
Eco47I GGWCC 5 cut(s) 65, 382, 1542, 1571, 1912
Eco53kI GAGCTC 2 cut(s) 540, 993
Eco57I CTGAAG 3 cut(s) 254, 995, 1327
Eco72I CACGTG 1 cut(s) 602
EcoICRI GAGCTC 2 cut(s) 540, 993
EcoNI CCTNNNNNAGG 1 cut(s) 497
EcoO109I RGGNCCY 1 cut(s) 65
EcoRI GAATTC 2 cut(s) 1381, 1945
EcoRII CCWGG 2 cut(s) 365, 384
EcoRV GATATC 1 cut(s) 372
EcoT14I CCWWGG 1 cut(s) 1591
EcoT22I ATGCAT 2 cut(s) 1030, 1359
EcoT38I GRGCYC 3 cut(s) 542, 995, 1022
EgeI GGCGCC 1 cut(s) 1856
EheI GGCGCC 1 cut(s) 1856
ErhI CCWWGG 1 cut(s) 1591
Esp3I CGTCTC 1 cut(s) 1826
FaeI CATG 7 cut(s) 227, 310, 710, 1072, 1273, 1310, 1366
FalI AAGNNNNNCTT 2 cut(s) 1502, 1534
FaqI GGGAC 3 cut(s) 1557, 1573, 1678
FatI CATG 7 cut(s) 223, 306, 706, 1068, 1269, 1306, 1362
FauI CCCGC 1 cut(s) 132
FauNDI CATATG 1 cut(s) 1111
FbaI TGATCA 2 cut(s) 58, 1266
Fnu4HI GCNGC 4 cut(s) 420, 1142, 1367, 1848
FokI GGATG 3 cut(s) 680, 801, 1907
FriOI GRGCYC 3 cut(s) 542, 995, 1022
Fsp4HI GCNGC 4 cut(s) 420, 1142, 1367, 1848
FspBI CTAG 4 cut(s) 191, 648, 1215, 1833
GlaI GCGC 1 cut(s) 1856
GluI GCNGC 4 cut(s) 420, 1142, 1367, 1848
HaeII RGCGCY 1 cut(s) 1858
HaeIII GGCC 2 cut(s) 1209, 1727
HapII CCGG 1 cut(s) 1472
HhaI GCGC 1 cut(s) 1857
Hin1I GRCGYC 2 cut(s) 9, 1855
Hin1II CATG 7 cut(s) 227, 310, 710, 1072, 1273, 1310, 1366
Hin6I GCGC 1 cut(s) 1855
HinP1I GCGC 1 cut(s) 1855
HincII GTYRAC 2 cut(s) 794, 936
HindII GTYRAC 2 cut(s) 794, 936
HindIII AAGCTT 2 cut(s) 426, 768
HinfI GANTC 5 cut(s) 97, 413, 545, 932, 1243
HpaII CCGG 1 cut(s) 1472
HphI GGTGA 4 cut(s) 517, 638, 1613, 1668
Hpy166II GTNNAC 3 cut(s) 794, 936, 980
Hpy188I TCNGA 8 cut(s) 234, 245, 544, 570, 830, 1138, 1242, 1257
Hpy188III TCNNGA 9 cut(s) 282, 535, 905, 1178, 1215, 1270, 1472, 1490, 1661
Hpy8I GTNNAC 3 cut(s) 794, 936, 980
HpyAV CCTTC 7 cut(s) 1019, 1351, 1487, 1667, 1703, 1803, 1971
HpyCH4III ACNGT 1 cut(s) 1537
HpyCH4IV ACGT 5 cut(s) 9, 601, 1278, 1564, 1586
HpyCH4V TGCA 8 cut(s) 164, 333, 1028, 1097, 1105, 1165, 1357, 1427
HpyF10VI GCNNNNNNNGC 2 cut(s) 425, 1363
HpyF3I CTNAG 5 cut(s) 441, 541, 1179, 1662, 1800
HpySE526I ACGT 5 cut(s) 9, 601, 1278, 1564, 1586
Hsp92I GRCGYC 2 cut(s) 9, 1855
Hsp92II CATG 7 cut(s) 227, 310, 710, 1072, 1273, 1310, 1366
HspAI GCGC 1 cut(s) 1855
KasI GGCGCC 1 cut(s) 1854
Kpn2I TCCGGA 1 cut(s) 1471
Ksp22I TGATCA 2 cut(s) 58, 1266
LguI GCTCTTC 2 cut(s) 489, 1523
LmnI GCTCC 3 cut(s) 537, 1474, 1613
Lsp1109I GCAGC 3 cut(s) 406, 1128, 1859
LweI GCATC 7 cut(s) 621, 634, 898, 1152, 1378, 1503, 1773
MabI ACCWGGT 1 cut(s) 384
MaeI CTAG 4 cut(s) 191, 648, 1215, 1833
MaeII ACGT 5 cut(s) 9, 601, 1278, 1564, 1586
MaeIII GTNAC 5 cut(s) 186, 289, 1194, 1665, 1921
MflI RGATCY 3 cut(s) 193, 284, 1217
MhlI GDGCHC 3 cut(s) 542, 995, 1022
Mly113I GGCGCC 1 cut(s) 1855
MlyI GAGTC 2 cut(s) 941, 1252
MmeI TCCRAC 2 cut(s) 909, 1785
MnlI CCTC 7 cut(s) 82, 251, 438, 1220, 1306, 1585, 1801
Mph1103I ATGCAT 2 cut(s) 1030, 1359
MroI TCCGGA 1 cut(s) 1471
MseI TTAA 8 cut(s) 666, 1082, 1146, 1388, 1407, 1430, 1452, 1776
MslI CAYNNNNRTG 1 cut(s) 952
MspA1I CMGCKG 1 cut(s) 1120
MspCI CTTAAG 1 cut(s) 1451
MspI CCGG 1 cut(s) 1472
MspR9I CCNGG 2 cut(s) 367, 386
Mva1269I GAATGC 3 cut(s) 1099, 1359, 1637
MvaI CCWGG 2 cut(s) 367, 386
MwoI GCNNNNNNNGC 2 cut(s) 425, 1363
NarI GGCGCC 1 cut(s) 1855
NdeI CATATG 1 cut(s) 1111
NlaIII CATG 7 cut(s) 227, 310, 710, 1072, 1273, 1310, 1366
NlaIV GGNNCC 3 cut(s) 959, 1573, 1856
NmeAIII GCCGAG 1 cut(s) 1041
NmuCI GTSAC 2 cut(s) 289, 1921
NsiI ATGCAT 2 cut(s) 1030, 1359
NspI RCATGY 2 cut(s) 1072, 1310
PaeI GCATGC 1 cut(s) 1072
PagI TCATGA 1 cut(s) 1269
PaqCI CACCTGC 1 cut(s) 1687
PciI ACATGT 1 cut(s) 1306
PciSI GCTCTTC 2 cut(s) 489, 1523
PcsI WCGNNNNNNNCGW 1 cut(s) 1583
PctI GAATGC 3 cut(s) 1099, 1359, 1637
PfeI GAWTC 3 cut(s) 97, 413, 545
PfoI TCCNGGA 1 cut(s) 365
PkrI GCNGC 4 cut(s) 421, 1143, 1368, 1849
PleI GAGTC 2 cut(s) 940, 1251
PluTI GGCGCC 1 cut(s) 1858
PmaCI CACGTG 1 cut(s) 602
PmlI CACGTG 1 cut(s) 602
PpsI GAGTC 2 cut(s) 940, 1251
Ppu21I YACGTR 1 cut(s) 602
PpuMI RGGWCCY 1 cut(s) 65
PscI ACATGT 1 cut(s) 1306
Psp124BI GAGCTC 2 cut(s) 542, 995
Psp5II RGGWCCY 1 cut(s) 65
Psp6I CCWGG 2 cut(s) 365, 384
PspCI CACGTG 1 cut(s) 602
PspGI CCWGG 2 cut(s) 365, 384
PspN4I GGNNCC 3 cut(s) 959, 1573, 1856
PspPI GGNCC 6 cut(s) 65, 382, 1542, 1571, 1725, 1912
PspPPI RGGWCCY 1 cut(s) 65
PsuI RGATCY 3 cut(s) 193, 284, 1217
PvuII CAGCTG 1 cut(s) 1120
RsaI GTAC 4 cut(s) 396, 728, 1116, 1281
RsaNI GTAC 4 cut(s) 395, 727, 1115, 1280
RseI CAYNNNNRTG 1 cut(s) 952
SacI GAGCTC 2 cut(s) 542, 995
SapI GCTCTTC 2 cut(s) 489, 1523
SaqAI TTAA 8 cut(s) 666, 1082, 1146, 1388, 1407, 1430, 1452, 1776
SatI GCNGC 4 cut(s) 420, 1142, 1367, 1848
Sau96I GGNCC 6 cut(s) 65, 382, 1542, 1571, 1725, 1912
SchI GAGTC 2 cut(s) 941, 1252
ScrFI CCNGG 2 cut(s) 367, 386
SduI GDGCHC 3 cut(s) 542, 995, 1022
SexAI ACCWGGT 1 cut(s) 384
SfaNI GCATC 7 cut(s) 621, 634, 898, 1152, 1378, 1503, 1773
SfoI GGCGCC 1 cut(s) 1856
SinI GGWCC 5 cut(s) 65, 382, 1542, 1571, 1912
SmiMI CAYNNNNRTG 1 cut(s) 952
SmlI CTYRAG 2 cut(s) 1451, 1823
SmoI CTYRAG 2 cut(s) 1451, 1823
SpeI ACTAGT 1 cut(s) 1832
SphI GCATGC 1 cut(s) 1072
SsiI CCGC 5 cut(s) 125, 422, 503, 1366, 1892
SspDI GGCGCC 1 cut(s) 1854
SspI AATATT 1 cut(s) 835
SspMI CTAG 4 cut(s) 191, 648, 1215, 1833
SstI GAGCTC 2 cut(s) 542, 995
StyD4I CCNGG 2 cut(s) 365, 384
StyI CCWWGG 1 cut(s) 1591
TaaI ACNGT 1 cut(s) 1537
TaiI ACGT 5 cut(s) 12, 604, 1281, 1567, 1589
TaqI TCGA 4 cut(s) 337, 678, 1489, 1577
TatI WGTACW 1 cut(s) 1114
TauI GCSGC 1 cut(s) 1369
TfiI GAWTC 3 cut(s) 97, 413, 545
Tru1I TTAA 8 cut(s) 666, 1082, 1146, 1388, 1407, 1430, 1452, 1776
Tru9I TTAA 8 cut(s) 666, 1082, 1146, 1388, 1407, 1430, 1452, 1776
TscAI CASTG 2 cut(s) 171, 968
TseFI GTSAC 2 cut(s) 289, 1921
TseI GCWGC 3 cut(s) 419, 1141, 1847
Tsp45I GTSAC 2 cut(s) 289, 1921
TspGWI ACGGA 2 cut(s) 277, 1364
TspRI CASTG 2 cut(s) 171, 968
Vha464I CTTAAG 1 cut(s) 1451
VpaK11BI GGWCC 5 cut(s) 65, 382, 1542, 1571, 1912
XagI CCTNNNNNAGG 1 cut(s) 497
XapI RAATTY 6 cut(s) 327, 985, 1099, 1381, 1761, 1945
XbaI TCTAGA 1 cut(s) 1214
XceI RCATGY 2 cut(s) 1072, 1310
XcmI CCANNNNNNNNNTGG 1 cut(s) 1764
XspI CTAG 4 cut(s) 191, 648, 1215, 1833
ZraI GACGTC 1 cut(s) 10
Zsp2I ATGCAT 2 cut(s) 1030, 1359
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.