Rmu_sc0006872.1_g000011

Cyclic nucleotide-gated ion channel 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006872.1
OG0000017
Physical Location & Seq
Reverse (-)
55676 .. 60283
4608 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006872.1_g000011.1.cds

Sequence Viewer

Length: 2370 bp
atgagtgccggcgatcttgaattgaagatgaagccgatctggacggggatgaagccgatctggaagggagacggagcccgcgatctgaacaaagggaagcggtctgaacagagggagccggcgatctggacgacaggaccaggctggaagggccgggtggacggagcggacctggtttggattgatcgggaaacagcaccagagcacccggaagaagagaaatctcagagatcggttactgagggaggagatacaagaacaactggaggatggttctcctttaacaaaattttcaatccaaaagggaagttgatgtggaacaacatatttgtagcatcttgtgtgtttgctgtctcctttgatcctttgttctactacattccgatcattaacgagaagaagaagtgcgtatattttgacacaaggttgaaggccatagcccttgtcttaaggttactcacagatcacttctacattgcggatattattatgcgaattttgaccaaggcttctgagctgacgaaaaaacaagcggaagctcataattcgaacgggaaaatatcagttgaggatgttgtgaaaatagctaagagggcttgggcgaaagctaatagatcatacatcctgattgacattttagctattcttcccataccccaggtgggaatgttcgttttcttttcgaagatgaagggtccgggatgttcgatagaaaggaggcttttcgacattcttattttgttccaatttgtcccacgcgtgcttcccgtttacttattgtgcagagaacgtaagaagactcttaataaagcaagcatgtggactaaaggtgttttcaatttttttctatacatccttgcaagtcatgtacttggagctctttggtacttttttgccattcaacgagagatggattgttggcattatgtttgccaaagtcacaagggatgtcaacctagtagctttagttgtagtgaacgacgagatagattgagaactatcccattgttagacaaacaatgtccgataaaccaaccggaagaaatgaaaggaaagccctttaattttggtatatttgctaatgcgcttgactccggcctagtgcagtcgattgattttcctcaaaaattcttgaactgtttctggtggggactccgaaatctgagctctcttggtcaaaacctccaaacaagtacctatgcatgggaaaacctctttgctgtgtttatttccattataggcttgctattgtttatatatctcatcggaaatttgcagacatatttgcagtttgcaactacaagatcagagaagattagacggaagatgaaaacgaaaaatttggaggttgatctgtggctatctagaaaaggactgcctagcaacttgaaggtagtgataatgcaattcatacaaaaaaaacttgaacagaacaatgatgttcaagttgagaacatcctctctgttcttccttcagcacatagtaaatatatcaagcgctatctacggttggctacactcaagaaagtgccaatgcttcaaaccatgggggtaagactgctgaaagcaatctgtgagcacctcgagccggtggactatcctgaggacagttgcattattcaagagggaaagccactccataagatgattttcatcacacatggcacagtacatacctacaggaccaatgataaaggtggaaaaattggttccgaatttcttgagaaagggaacttctatggatcagaagagcttctcaattgggcatcaaagtttagctgttccaacgaattaccaaactcgaccagaatggttaagcctgtcacgaaagtcgaagtctttgagctgagcgcggacgacttgaagagtgtagccatcaagtactggtggaatttcaccaagaacagggatccaaaggatttcgaccagtctgtgttggaggagtatgcaatattctccatagaaaaagaaatccgtcgccgtaggcaagcgaaaaagaagcatacaataagttctctccataagttggatactaatcagggtagtgctagccagaagttgcaaaaggttatcagtagggtcatgagggatcagctaccttcaccagtttgtgctctagccttgagttcttccaaagttttaatcttgcagaatatgagttctcaacaatcattagaaaaattaatggctacacatacagatctcttcctcagcaattcatctctcttccaccgctgtacgattcctccgataccaaacccggttccagctgtccatcccgggccggtgcctcgatttgactcattcgcagaatcaagttgcagacagatcactcatctgacgactggcgactccttcctttgcgcctag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
Ion_trans cNMP_binding

Protein Analysis

789

Amino Acids

90.39

Weight (kDa)

9.48

Isoelectric Point (pI)

47.22

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000017)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07351 FvH4_1g11800 FvH4_1g11800 FvH4_1g11800 FvH4_1g11800 FvH4_1g11800 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_4g14360 FvH4_6g13561 FvH4_6g13562 FvH4_6g13580 FvH4_6g13590 FvH4_6g13590 FvH4_6g13590 FvH4_6g13731 FvH4_6g13770 FvH4_6g13800 FvH4_6g13800 FvH4_6g13860 FvH4_6g13870 FvH4_6g13870 FvH4_6g13870 FvH4_6g13870 FvH4_6g13870 FvH4_6g13890 FvH4_6g33801 FvH4_7g13020 FvH4_7g13270 FvH4_7g13270 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g14580 FvH4_7g14580 FvH4_7g14580 FvH4_7g14600 FvH4_7g14600 FvH4_7g20030 FvH4_7g20510 FvH4_7g20510 FvH4_7g20510 FvH4_7g20670 FvH4_7g20670 FvH4_7g20670 FvH4_7g20670 FvH4_7g20690 FvH4_7g20690 FvH4_7g31930 FvH4_7g31930 FvH4_7g31940 FvH4_7g31940
malus_domestica MD01G1115700.v1.1 MD01G1115800.v1.1 MD01G1116600.v1.1 MD01G1116700.v1.1 MD01G1117000.v1.1 MD01G1225000.v1.1 MD02G1077900.v1.1 MD02G1078000.v1.1 MD02G1078200.v1.1 MD02G1078400.v1.1 MD02G1084300.v1.1 MD04G1004700.v1.1 MD04G1123100.v1.1 MD04G1123200.v1.1 MD04G1128000.v1.1 MD04G1128400.v1.1 MD05G1299700.v1.1 MD05G1300000.v1.1 MD07G1184000.v1.1 MD07G1292300.v1.1 MD08G1214800.v1.1
prunus_persica Prupe.1G205100_v2.0.a1 Prupe.1G205100_v2.0.a1 Prupe.1G205200_v2.0.a1 Prupe.2G222300_v2.0.a1 Prupe.2G223300_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223600_v2.0.a1 Prupe.2G223600_v2.0.a1 Prupe.2G223600_v2.0.a1 Prupe.2G223700_v2.0.a1 Prupe.2G223700_v2.0.a1 Prupe.2G223700_v2.0.a1 Prupe.2G223700_v2.0.a1 Prupe.2G223800_v2.0.a1 Prupe.2G223900_v2.0.a1 Prupe.2G224000_v2.0.a1 Prupe.5G162000_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G291000_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G210400_v2.0.a1 Prupe.7G210600_v2.0.a1 Prupe.7G210700_v2.0.a1 Prupe.7G210800_v2.0.a1 Prupe.7G210900_v2.0.a1 Prupe.8G097600_v2.0.a1 Prupe.8G097800_v2.0.a1 Prupe.8G097800_v2.0.a1
pyrus_communis pycom01g14430 pycom01g14440 pycom01g23130 pycom01g23160 pycom01g23330 pycom02g06210 pycom02g06220 pycom02g06250 pycom02g06270 pycom02g06710 pycom03g05360 pycom03g05380 pycom04g11470 pycom04g11480 pycom04g11520 pycom04g11560 pycom04g11600 pycom04g11610 pycom04g11650 pycom04g11660 pycom04g11670 pycom05g27790 pycom07g17630 pycom08g20960 pycom126g00020 pycom126g00030
rosa_chinensis RchiOBHm_Chr1g0318251 RchiOBHm_Chr1g0318731 RchiOBHm_Chr1g0339101 RchiOBHm_Chr1g0339111 RchiOBHm_Chr1g0347151 RchiOBHm_Chr1g0347161 RchiOBHm_Chr1g0347221 RchiOBHm_Chr1g0352401 RchiOBHm_Chr1g0352441 RchiOBHm_Chr1g0352461 RchiOBHm_Chr1g0356131 RchiOBHm_Chr1g0363991 RchiOBHm_Chr1g0364791 RchiOBHm_Chr1g0364801 RchiOBHm_Chr1g0364811 RchiOBHm_Chr1g0364851 RchiOBHm_Chr1g0364951 RchiOBHm_Chr1g0370821 RchiOBHm_Chr1g0381221 RchiOBHm_Chr1g0381231 RchiOBHm_Chr1g0381261 RchiOBHm_Chr1g0381271 RchiOBHm_Chr1g0381341 RchiOBHm_Chr1g0381351 RchiOBHm_Chr1g0381391 RchiOBHm_Chr1g0381801 RchiOBHm_Chr1g0381821 RchiOBHm_Chr2g0093241 RchiOBHm_Chr2g0116391 RchiOBHm_Chr3g0466441 RchiOBHm_Chr3g0466631 RchiOBHm_Chr3g0466651 RchiOBHm_Chr3g0496921 RchiOBHm_Chr4g0400441 RchiOBHm_Chr4g0400501 RchiOBHm_Chr4g0400511 RchiOBHm_Chr4g0400691 RchiOBHm_Chr4g0400701 RchiOBHm_Chr4g0404331 RchiOBHm_Chr5g0052101 RchiOBHm_Chr5g0052111 RchiOBHm_Chr5g0052171 RchiOBHm_Chr5g0052181 RchiOBHm_Chr6g0264161 RchiOBHm_Chr6g0265551 RchiOBHm_Chr7g0213571 RchiOBHm_Chr7g0213581
rosa_laevigata RLG00000002796 RLG00000003261 RLG00000007935 RLG00000007936 RLG00000009187 RLG00000014179 RLG00000016381 RLG00000018265 RLG00000024558 RLG00000024574 RLG00000026232 RLG00000026234 RLG00000026236 RLG00000026237 RLG00000027459 RLG00000027461 RLG00000027463 RLG00000027530 RLG00000028103 RLG00000028304 RLG00000028333 RLG00000029214 RLG00000029848 RLG00000029951 RLG00000030115 RLG00000030552 RLG00000033668 RLG00000034840 RLG00000034841 RLG00000034842 RLG00000035830
rosa_multiflora Rmu_sc0000654.1_g000004 Rmu_sc0000675.1_g000025 Rmu_sc0001075.1_g000002 Rmu_sc0001726.1_g000004 Rmu_sc0001772.1_g000061 Rmu_sc0001772.1_g000065 Rmu_sc0002067.1_g000002 Rmu_sc0002183.1_g000001 Rmu_sc0002183.1_g000006 Rmu_sc0002244.1_g000003 Rmu_sc0002313.1_g000004 Rmu_sc0002319.1_g000004 Rmu_sc0002539.1_g000085 Rmu_sc0002636.1_g000004 Rmu_sc0003229.1_g000007 Rmu_sc0003313.1_g000020 Rmu_sc0003546.1_g000007 Rmu_sc0003724.1_g000015 Rmu_sc0003936.1_g000029 Rmu_sc0004191.1_g000067 Rmu_sc0004525.1_g000012 Rmu_sc0005122.1_g000009 Rmu_sc0005255.1_g000040 Rmu_sc0005338.1_g000016 Rmu_sc0005584.1_g000008 Rmu_sc0006460.1_g000013 Rmu_sc0006872.1_g000011 Rmu_sc0006872.1_g000015 Rmu_sc0006872.1_g000016 Rmu_sc0006952.1_g000013 Rmu_sc0007342.1_g000005 Rmu_sc0007342.1_g000006 Rmu_sc0008418.1_g000003 Rmu_sc0008418.1_g000006 Rmu_sc0008636.1_g000007 Rmu_sc0008636.1_g000008 Rmu_sc0009205.1_g000014 Rmu_sc0009365.1_g000014 Rmu_sc0009917.1_g000002 Rmu_sc0019289.1_g000003 Rmu_ssc0000098.1_g000011 Rmu_ssc0000098.1_g000012 Rmu_ssc0000167.1_g000018 Rmu_ssc0000167.1_g000024 Rmu_ssc0000326.1_g000015
rosa_roxburghii Rroxscaffold_166G00440780 Rroxscaffold_176G00431500 Rroxscaffold_1G00015080 Rroxscaffold_1G00027880 Rroxscaffold_1G00027890 Rroxscaffold_1G00027920 Rroxscaffold_2G00127250 Rroxscaffold_2G00148380 Rroxscaffold_3G00219450 Rroxscaffold_3G00232170 Rroxscaffold_3G00232210 Rroxscaffold_3G00242230 Rroxscaffold_3G00242240 Rroxscaffold_3G00244790 Rroxscaffold_3G00245790 Rroxscaffold_4G00278400 Rroxscaffold_4G00278430 Rroxscaffold_4G00278670 Rroxscaffold_4G00278680 Rroxscaffold_4G00278690 Rroxscaffold_4G00278700 Rroxscaffold_4G00278720 Rroxscaffold_4G00291690 Rroxscaffold_4G00292070 Rroxscaffold_4G00292090 Rroxscaffold_4G00292770 Rroxscaffold_4G00302240 Rroxscaffold_4G00302860 Rroxscaffold_4G00311320 Rroxscaffold_4G00311330 Rroxscaffold_4G00320570 Rroxscaffold_4G00322050 Rroxscaffold_4G00329480 Rroxscaffold_4G00329730 Rroxscaffold_5G00345500 Rroxscaffold_5G00345510 Rroxscaffold_5G00360830 Rroxscaffold_5G00360840 Rroxscaffold_6G00393450 Rroxscaffold_6G00404030 Rroxscaffold_6G00414220 Rroxscaffold_6G00414230 Rroxscaffold_6G00414280 Rroxscaffold_6G00414290 Rroxscaffold_6G00414350 Rroxscaffold_6G00414470 Rroxscaffold_7G00202570 Rroxscaffold_7G00203460 Rroxscaffold_7G00203470
rosa_rugosa Rorug01G0020500 Rorug01G0020600 Rorug01G0020700 Rorug01G0143700.1 Rorug01G0225700 Rorug01G0228500 Rorug01G0228600 Rorug01G0228600 Rorug01G0228700 Rorug01G0228800 Rorug01G0228800 Rorug01G0229000 Rorug01G0229300 Rorug01G0229400 Rorug01G0229600 Rorug01G0229700 Rorug01G0232200 Rorug01G0232600 Rorug01G0232600 Rorug01G0311900 Rorug01G0311900 Rorug01G0318400 Rorug01G0318500 Rorug01G0318500 Rorug01G0318500 Rorug01G0427900 Rorug01G0427900 Rorug01G0428000 Rorug01G0428200 Rorug01G0428300 Rorug01G0428400 Rorug01G0431500 Rorug01G0431600 Rorug01G0431600 Rorug02G0033800 Rorug02G0206300 Rorug03G0081900 Rorug03G0083200 Rorug03G0083200 Rorug03G0083300 Rorug04G0025100 Rorug04G0025100 Rorug04G0025200 Rorug04G0025300 Rorug04G0058600 Rorug04G0058700 Rorug04G0058800 Rorug04G0098400 Rorug04G0098500 Rorug05G0274500 Rorug05G0274600 Rorug05G0274800 Rorug06G0008500 Rorug06G0009100 Rorug06G0018000
rosa_samantha Rh1AG031700 Rh1AG036100 Rh1AG089800 Rh1AG239800 Rh1AG239900 Rh1AG242000 Rh1AG242300 Rh1AG245600 Rh1AG262600 Rh1AG319700 Rh1AG319800 Rh1AG319900 Rh1AG327200 Rh1AG451100 Rh1AG451200 Rh1AG451300 Rh1AG451600 Rh1AG451700 Rh1BG027200 Rh1BG071600 Rh1BG090700 Rh1BG211000 Rh1BG213000 Rh1BG213500 Rh1BG282800 Rh1BG288400 Rh1BG408100 Rh1BG408200 Rh1BG408400 Rh1BG408700 Rh1CG026300 Rh1CG028300 Rh1CG224100 Rh1CG226000 Rh1CG226100 Rh1CG229300 Rh1CG229400 Rh1CG245900 Rh1CG299200 Rh1CG299400 Rh1CG299500 Rh1CG303300 Rh1CG305100 Rh1CG422500 Rh1CG422600 Rh1CG422700 Rh1CG422800 Rh1CG422900 Rh1CG423100 Rh1CG423300 Rh1CG423400 Rh1CG426300 Rh1CG426600 Rh1DG239300 Rh1DG239600 Rh1DG258300 Rh1DG314200 Rh1DG314300 Rh1DG314400 Rh1DG320000 Rh1DG439200 Rh1DG439400 Rh1DG439500 Rh1DG439700 Rh1DG440000 Rh1DG443800 Rh2AG261800 Rh2BG080900 Rh2CG083300 Rh2DG078900 Rh2DG270000 Rh2DG270100 Rh3AG128400 Rh3AG130100 Rh3AG130500 Rh3AG332500 Rh3AG332600 Rh3AG332800 Rh3BG149700 Rh3BG151500 Rh3CG151400 Rh3CG354500 Rh3CG366800 Rh3DG150500 Rh3DG152200 Rh4AG101400 Rh4AG102900 Rh4AG148300 Rh4AG148600 Rh4BG098000 Rh4CG111100 Rh4CG111300 Rh4CG155100 Rh4DG094800 Rh5AG213600 Rh5AG346900 Rh5AG347000 Rh5BG357500 Rh5BG357700 Rh5BG485400 Rh5CG383100 Rh5CG383200 Rh5CG383300 Rh5CG509900 Rh5DG373000 Rh5DG373200 Rh6BG054300 Rh6BG126300 Rh6CG125100 Rh6CG185300 Rh6DG177000 Rh7AG276100 Rh7AG276200 Rh7BG230500 Rh7BG270500 Rh7BG364000 Rh7CG250100 Rh7CG295200 Rh7CG295300 Rh7DG389700
rosa_wichuraiana Rw0G001190 Rw0G010680 Rw0G013360 Rw0G014310 Rw0G014890 Rw0G020310 Rw0G021350 Rw0G022510 Rw1G003360 Rw1G004330 Rw1G006930 Rw1G008310 Rw1G021090 Rw1G021150 Rw1G021210 Rw1G023200 Rw1G023210 Rw1G028340 Rw1G028350 Rw1G028990 Rw1G032510 Rw1G039370 Rw1G039400 Rw1G039410 Rw1G039420 Rw1G039430 Rw2G006700 Rw2G020550 Rw2G020580 Rw3G012130 Rw3G012300 Rw3G012310 Rw3G028220 Rw3G029230 Rw5G021600 Rw5G032790 Rw6G011240 Rw7G027670 Rw7G032780

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 2287
AccB7I CCANNNNNTGG 1 cut(s) 2026
AccBSI CCGCTC 1 cut(s) 167
AccII CGCG 3 cut(s) 81, 759, 1853
AciI CCGC 7 cut(s) 79, 100, 167, 479, 533, 1853, 2233
AclWI GGATC 5 cut(s) 356, 1750, 1904, 1917, 2097
AcsI RAATTY 7 cut(s) 288, 495, 1127, 1270, 1339, 1715, 1891
AcuI CTGAAG 1 cut(s) 1458
AfaI GTAC 6 cut(s) 870, 887, 1195, 1671, 1883, 2239
AfeI AGCGCT 1 cut(s) 1499
AfiI CCNNNNNNNGG 5 cut(s) 662, 1203, 1588, 1905, 2026
AflII CTTAAG 1 cut(s) 448
AflIII ACRYGT 1 cut(s) 757
AjnI CCWGG 3 cut(s) 139, 171, 657
Alw21I GWGCWC 5 cut(s) 207, 880, 1169, 1581, 2116
Alw26I GTCTC 2 cut(s) 63, 358
AlwI GGATC 5 cut(s) 356, 1750, 1904, 1917, 2097
Ama87I CYCGRG 2 cut(s) 1583, 2279
Aor51HI AGCGCT 1 cut(s) 1499
AoxI GGCC 4 cut(s) 151, 432, 1096, 2282
ApoI RAATTY 7 cut(s) 288, 495, 1127, 1270, 1339, 1715, 1891
AseI ATTAAT 1 cut(s) 2183
Asp700I GAANNNNTTC 2 cut(s) 1139, 1752
AspLEI GCGC 4 cut(s) 1087, 1500, 1853, 2366
AspS9I GGNCC 6 cut(s) 137, 151, 169, 695, 1683, 2282
AsuC2I CCSGG 6 cut(s) 155, 209, 699, 2261, 2280, 2281
AsuHPI GGTGA 2 cut(s) 1888, 2094
AsuII TTCGAA 2 cut(s) 548, 683
AsuNHI GCTAGC 1 cut(s) 2048
AvaI CYCGRG 2 cut(s) 1583, 2279
AvaII GGWCC 4 cut(s) 137, 169, 695, 1683
AxyI CCTNAGG 1 cut(s) 1602
BamHI GGATCC 1 cut(s) 1909
BanI GGYRCC 1 cut(s) 2287
BanII GRGCYC 3 cut(s) 79, 880, 1169
BbsI GAAGAC 1 cut(s) 803
Bbv12I GWGCWC 5 cut(s) 207, 880, 1169, 1581, 2116
BbvCI CCTCAGC 1 cut(s) 2210
BccI CCATC 4 cut(s) 264, 904, 1883, 2283
BceAI ACGGC 1 cut(s) 1965
BciT130I CCWGG 3 cut(s) 141, 173, 659
BciVI GTATCC 1 cut(s) 2023
BcnI CCSGG 6 cut(s) 155, 209, 699, 2261, 2280, 2281
BcoDI GTCTC 2 cut(s) 63, 358
BfaI CTAG 7 cut(s) 957, 1100, 1365, 1380, 2049, 2117, 2368
BfmI CTRYAG 1 cut(s) 1678
BfoI RGCGCY 1 cut(s) 1501
BfrI CTTAAG 1 cut(s) 448
BfuI GTATCC 1 cut(s) 2023
BglII AGATCT 1 cut(s) 2200
BlpI GCTNAGC 1 cut(s) 1847
BmcAI AGTACT 1 cut(s) 1883
Bme1390I CCNGG 9 cut(s) 141, 155, 173, 209, 659, 699, 2261, 2280, 2281
Bme18I GGWCC 4 cut(s) 137, 169, 695, 1683
BmeT110I CYCGRG 2 cut(s) 1583, 2279
BmgT120I GGNCC 6 cut(s) 137, 151, 169, 695, 1683, 2282
BmiI GGNNCC 7 cut(s) 76, 117, 696, 1711, 1911, 2265, 2289
BmrFI CCNGG 9 cut(s) 141, 155, 173, 209, 659, 699, 2261, 2280, 2281
BmsI GCATC 2 cut(s) 344, 1775
BmtI GCTAGC 1 cut(s) 2052
BpiI GAAGAC 1 cut(s) 803
BpmI CTGGAG 1 cut(s) 285
Bpu10I CCTNAGC 1 cut(s) 2210
Bpu1102I GCTNAGC 1 cut(s) 1847
Bpu14I TTCGAA 2 cut(s) 548, 683
BpuEI CTTGAG 3 cut(s) 1505, 1742, 2143
BpuMI CCSGG 6 cut(s) 155, 209, 699, 2261, 2280, 2281
BsaBI GATNNNNATC 2 cut(s) 1652, 2034
BsaJI CCNNGG 4 cut(s) 504, 657, 1545, 2279
BsaWI WCCGGW 1 cut(s) 1036
BsaXI ACNNNNNCTCC 2 cut(s) 2230, 2260
Bsc4I CCNNNNNNNGG 5 cut(s) 662, 1203, 1588, 1905, 2026
Bse118I RCCGGY 4 cut(s) 8, 118, 1588, 2284
Bse1I ACTGG 5 cut(s) 268, 1889, 1927, 2105, 2350
Bse21I CCTNAGG 1 cut(s) 1602
Bse3DI GCAATG 1 cut(s) 474
Bse8I GATNNNNATC 2 cut(s) 1652, 2034
BseBI CCWGG 3 cut(s) 141, 173, 659
BseDI CCNNGG 4 cut(s) 504, 657, 1545, 2279
BseGI GGATG 9 cut(s) 54, 275, 577, 621, 707, 852, 953, 1455, 2275
BseJI GATNNNNATC 2 cut(s) 1652, 2034
BseLI CCNNNNNNNGG 5 cut(s) 662, 1203, 1588, 1905, 2026
BseMI GCAATG 1 cut(s) 474
BseMII CTCAG 7 cut(s) 231, 239, 504, 1154, 1593, 1838, 2224
BseNI ACTGG 5 cut(s) 268, 1889, 1927, 2105, 2350
BseRI GAGGAG 2 cut(s) 261, 1955
BsgI GTGCAG 2 cut(s) 802, 1124
Bsh1236I CGCG 3 cut(s) 81, 759, 1853
BshFI GGCC 4 cut(s) 153, 434, 1098, 2284
BshNI GGYRCC 1 cut(s) 2287
BsiHKAI GWGCWC 5 cut(s) 207, 880, 1169, 1581, 2116
BsiHKCI CYCGRG 2 cut(s) 1583, 2279
BslFI GGGAC 2 cut(s) 737, 1164
BslI CCNNNNNNNGG 5 cut(s) 662, 1203, 1588, 1905, 2026
BsmAI GTCTC 2 cut(s) 63, 358
BsmBI CGTCTC 1 cut(s) 63
BsmFI GGGAC 2 cut(s) 737, 1164
BsnI GGCC 4 cut(s) 153, 434, 1098, 2284
BsoBI CYCGRG 2 cut(s) 1583, 2279
Bsp119I TTCGAA 2 cut(s) 548, 683
Bsp1286I GDGCHC 6 cut(s) 79, 207, 880, 1169, 1581, 2116
Bsp1720I GCTNAGC 1 cut(s) 1847
Bsp19I CCATGG 1 cut(s) 1545
BspACI CCGC 7 cut(s) 79, 100, 167, 479, 533, 1853, 2233
BspANI GGCC 4 cut(s) 153, 434, 1098, 2284
BspCNI CTCAG 7 cut(s) 232, 238, 505, 1155, 1594, 1839, 2223
BspFNI CGCG 3 cut(s) 81, 759, 1853
BspHI TCATGA 1 cut(s) 2082
BspLI GGNNCC 7 cut(s) 76, 117, 696, 1711, 1911, 2265, 2289
BspOI GCTAGC 1 cut(s) 2052
BspPI GGATC 5 cut(s) 356, 1750, 1904, 1917, 2097
BspQI GCTCTTC 1 cut(s) 1743
BspT104I TTCGAA 2 cut(s) 548, 683
BspT107I GGYRCC 1 cut(s) 2287
BspTI CTTAAG 1 cut(s) 448
BsrBI CCGCTC 1 cut(s) 167
BsrDI GCAATG 1 cut(s) 474
BsrFI RCCGGY 4 cut(s) 8, 118, 1588, 2284
BsrI ACTGG 5 cut(s) 268, 1889, 1927, 2105, 2350
BssAI RCCGGY 4 cut(s) 8, 118, 1588, 2284
BssECI CCNNGG 4 cut(s) 504, 657, 1545, 2279
BssT1I CCWWGG 2 cut(s) 504, 1545
Bst2UI CCWGG 3 cut(s) 141, 173, 659
Bst4CI ACNGT 4 cut(s) 1139, 1509, 1610, 1669
Bst6I CTCTTC 5 cut(s) 210, 1743, 1859, 2210, 2231
BstAFI CTTAAG 1 cut(s) 448
BstBI TTCGAA 2 cut(s) 548, 683
BstC8I GCNNGC 8 cut(s) 10, 79, 120, 761, 814, 1244, 1989, 2050
BstDEI CTNAG 8 cut(s) 225, 240, 513, 588, 1163, 1602, 1847, 2210
BstDSI CCRYGG 1 cut(s) 1545
BstF5I GGATG 9 cut(s) 54, 275, 577, 621, 707, 852, 953, 1455, 2275
BstFNI CGCG 3 cut(s) 81, 759, 1853
BstH2I RGCGCY 1 cut(s) 1501
BstHHI GCGC 4 cut(s) 1087, 1500, 1853, 2366
BstMAI GTCTC 2 cut(s) 63, 358
BstMWI GCNNNNNNNGC 3 cut(s) 150, 593, 1585
BstNI CCWGG 3 cut(s) 141, 173, 659
BstNSI RCATGY 1 cut(s) 820
BstSCI CCNGG 9 cut(s) 139, 153, 171, 207, 657, 697, 2259, 2278, 2279
BstSFI CTRYAG 1 cut(s) 1678
BstUI CGCG 3 cut(s) 81, 759, 1853
BstV2I GAAGAC 1 cut(s) 803
BstX2I RGATCY 2 cut(s) 1909, 2200
BstYI RGATCY 2 cut(s) 1909, 2200
Bsu36I CCTNAGG 1 cut(s) 1602
BsuI GTATCC 1 cut(s) 2023
BsuRI GGCC 4 cut(s) 153, 434, 1098, 2284
BtgI CCRYGG 1 cut(s) 1545
BtsCI GGATG 9 cut(s) 54, 275, 577, 621, 707, 852, 953, 1455, 2275
Cac8I GCNNGC 8 cut(s) 10, 79, 120, 761, 814, 1244, 1989, 2050
CciI TCATGA 1 cut(s) 2082
CfoI GCGC 4 cut(s) 1087, 1500, 1853, 2366
Cfr10I RCCGGY 4 cut(s) 8, 118, 1588, 2284
Cfr13I GGNCC 6 cut(s) 137, 151, 169, 695, 1683, 2282
Cfr9I CCCGGG 1 cut(s) 2279
CsiI ACCWGGT 1 cut(s) 171
Csp6I GTAC 6 cut(s) 869, 886, 1194, 1670, 1882, 2238
CviAII CATG 6 cut(s) 817, 866, 1203, 1546, 1661, 2083
CviQI GTAC 6 cut(s) 869, 886, 1194, 1670, 1882, 2238
DdeI CTNAG 8 cut(s) 225, 240, 513, 588, 1163, 1602, 1847, 2210
Eam1104I CTCTTC 5 cut(s) 210, 1743, 1859, 2210, 2231
EarI CTCTTC 5 cut(s) 210, 1743, 1859, 2210, 2231
Ecl136II GAGCTC 2 cut(s) 878, 1167
Eco130I CCWWGG 2 cut(s) 504, 1545
Eco24I GRGCYC 3 cut(s) 79, 880, 1169
Eco47I GGWCC 4 cut(s) 137, 169, 695, 1683
Eco47III AGCGCT 1 cut(s) 1499
Eco53kI GAGCTC 2 cut(s) 878, 1167
Eco57I CTGAAG 1 cut(s) 1458
Eco81I CCTNAGG 1 cut(s) 1602
Eco88I CYCGRG 2 cut(s) 1583, 2279
EcoICRI GAGCTC 2 cut(s) 878, 1167
EcoRII CCWGG 3 cut(s) 139, 171, 657
EcoT14I CCWWGG 2 cut(s) 504, 1545
EcoT22I ATGCAT 1 cut(s) 1204
EcoT38I GRGCYC 3 cut(s) 79, 880, 1169
ErhI CCWWGG 2 cut(s) 504, 1545
Esp3I CGTCTC 1 cut(s) 63
FaeI CATG 6 cut(s) 820, 869, 1206, 1549, 1664, 2086
FaqI GGGAC 2 cut(s) 737, 1164
FatI CATG 6 cut(s) 816, 865, 1202, 1545, 1660, 2082
FauI CCCGC 1 cut(s) 86
FokI GGATG 9 cut(s) 61, 282, 584, 608, 714, 839, 960, 1442, 2262
FriOI GRGCYC 3 cut(s) 79, 880, 1169
FspBI CTAG 7 cut(s) 957, 1100, 1365, 1380, 2049, 2117, 2368
GlaI GCGC 4 cut(s) 1086, 1499, 1852, 2365
GsuI CTGGAG 1 cut(s) 285
HaeII RGCGCY 1 cut(s) 1501
HaeIII GGCC 4 cut(s) 153, 434, 1098, 2284
HhaI GCGC 4 cut(s) 1087, 1500, 1853, 2366
Hin1II CATG 6 cut(s) 820, 869, 1206, 1549, 1664, 2086
Hin6I GCGC 4 cut(s) 1085, 1498, 1851, 2364
HinP1I GCGC 4 cut(s) 1085, 1498, 1851, 2364
HincII GTYRAC 1 cut(s) 953
HindII GTYRAC 1 cut(s) 953
HinfI GANTC 7 cut(s) 799, 1091, 1152, 2242, 2300, 2312, 2351
HphI GGTGA 2 cut(s) 1888, 2094
Hpy166II GTNNAC 6 cut(s) 160, 772, 822, 953, 977, 1594
Hpy8I GTNNAC 6 cut(s) 160, 772, 822, 953, 977, 1594
Hpy99I CGWCG 2 cut(s) 984, 1980
HpyAV CCTTC 8 cut(s) 58, 142, 424, 685, 1384, 1482, 2109, 2365
HpyCH4III ACNGT 4 cut(s) 1139, 1509, 1610, 1669
HpyCH4IV ACGT 1 cut(s) 790
HpyF10VI GCNNNNNNNGC 3 cut(s) 150, 593, 1585
HpyF3I CTNAG 8 cut(s) 225, 240, 513, 588, 1163, 1602, 1847, 2210
HpySE526I ACGT 1 cut(s) 790
Hsp92II CATG 6 cut(s) 820, 869, 1206, 1549, 1664, 2086
HspAI GCGC 4 cut(s) 1085, 1498, 1851, 2364
KroI GCCGGC 2 cut(s) 8, 118
KroNI GCCGGC 2 cut(s) 10, 120
LguI GCTCTTC 1 cut(s) 1743
LmnI GCTCC 4 cut(s) 74, 115, 164, 875
LweI GCATC 2 cut(s) 344, 1775
MabI ACCWGGT 1 cut(s) 171
MaeI CTAG 7 cut(s) 957, 1100, 1365, 1380, 2049, 2117, 2368
MaeII ACGT 1 cut(s) 790
MaeIII GTNAC 4 cut(s) 235, 453, 938, 1822
MbiI CCGCTC 1 cut(s) 167
MfeI CAATTG 1 cut(s) 1759
MflI RGATCY 2 cut(s) 1909, 2200
MhlI GDGCHC 6 cut(s) 79, 207, 880, 1169, 1581, 2116
MluI ACGCGT 1 cut(s) 757
MlyI GAGTC 5 cut(s) 793, 1085, 1146, 2294, 2345
MmeI TCCRAC 3 cut(s) 1809, 1917, 2007
Mph1103I ATGCAT 1 cut(s) 1204
MroNI GCCGGC 2 cut(s) 8, 118
MroXI GAANNNNTTC 2 cut(s) 1139, 1752
MseI TTAA 8 cut(s) 282, 390, 449, 804, 1062, 1815, 2141, 2183
MspA1I CMGCKG 2 cut(s) 2235, 2270
MspCI CTTAAG 1 cut(s) 448
MspR9I CCNGG 9 cut(s) 141, 155, 173, 209, 659, 699, 2261, 2280, 2281
MunI CAATTG 1 cut(s) 1759
MvaI CCWGG 3 cut(s) 141, 173, 659
MvnI CGCG 3 cut(s) 81, 759, 1853
MwoI GCNNNNNNNGC 3 cut(s) 150, 593, 1585
NaeI GCCGGC 2 cut(s) 10, 120
NciI CCSGG 6 cut(s) 155, 209, 699, 2261, 2280, 2281
NcoI CCATGG 1 cut(s) 1545
NgoMIV GCCGGC 2 cut(s) 8, 118
NheI GCTAGC 1 cut(s) 2048
NlaIII CATG 6 cut(s) 820, 869, 1206, 1549, 1664, 2086
NlaIV GGNNCC 7 cut(s) 76, 117, 696, 1711, 1911, 2265, 2289
NmuCI GTSAC 2 cut(s) 938, 1822
NsiI ATGCAT 1 cut(s) 1204
NspI RCATGY 1 cut(s) 820
NspV TTCGAA 2 cut(s) 548, 683
PaeR7I CTCGAG 1 cut(s) 1583
PagI TCATGA 1 cut(s) 2082
PciSI GCTCTTC 1 cut(s) 1743
PcsI WCGNNNNNNNCGW 2 cut(s) 78, 2246
PdiI GCCGGC 2 cut(s) 10, 120
PdmI GAANNNNTTC 2 cut(s) 1139, 1752
PfeI GAWTC 2 cut(s) 2242, 2312
PflMI CCANNNNNTGG 1 cut(s) 2026
PfoI TCCNGGA 1 cut(s) 697
PleI GAGTC 5 cut(s) 793, 1085, 1146, 2294, 2345
PpsI GAGTC 5 cut(s) 793, 1085, 1146, 2294, 2345
PshBI ATTAAT 1 cut(s) 2183
Psp124BI GAGCTC 2 cut(s) 880, 1169
Psp6I CCWGG 3 cut(s) 139, 171, 657
PspGI CCWGG 3 cut(s) 139, 171, 657
PspN4I GGNNCC 7 cut(s) 76, 117, 696, 1711, 1911, 2265, 2289
PspPI GGNCC 6 cut(s) 137, 151, 169, 695, 1683, 2282
PspXI VCTCGAGB 1 cut(s) 1583
PsuI RGATCY 2 cut(s) 1909, 2200
PvuII CAGCTG 1 cut(s) 2270
RsaI GTAC 6 cut(s) 870, 887, 1195, 1671, 1883, 2239
RsaNI GTAC 6 cut(s) 869, 886, 1194, 1670, 1882, 2238
SacI GAGCTC 2 cut(s) 880, 1169
SapI GCTCTTC 1 cut(s) 1743
SaqAI TTAA 8 cut(s) 282, 390, 449, 804, 1062, 1815, 2141, 2183
Sau96I GGNCC 6 cut(s) 137, 151, 169, 695, 1683, 2282
ScaI AGTACT 1 cut(s) 1883
SchI GAGTC 5 cut(s) 793, 1085, 1146, 2294, 2345
ScrFI CCNGG 9 cut(s) 141, 155, 173, 209, 659, 699, 2261, 2280, 2281
SduI GDGCHC 6 cut(s) 79, 207, 880, 1169, 1581, 2116
SexAI ACCWGGT 1 cut(s) 171
SfaNI GCATC 2 cut(s) 344, 1775
SfcI CTRYAG 1 cut(s) 1678
Sfr274I CTCGAG 1 cut(s) 1583
SfuI TTCGAA 2 cut(s) 548, 683
SinI GGWCC 4 cut(s) 137, 169, 695, 1683
SlaI CTCGAG 1 cut(s) 1583
SmaI CCCGGG 1 cut(s) 2281
SmlI CTYRAG 5 cut(s) 448, 1520, 1583, 1721, 2122
SmoI CTYRAG 5 cut(s) 448, 1520, 1583, 1721, 2122
SsiI CCGC 7 cut(s) 79, 100, 167, 479, 533, 1853, 2233
SspI AATATT 1 cut(s) 1953
SspMI CTAG 7 cut(s) 957, 1100, 1365, 1380, 2049, 2117, 2368
SstI GAGCTC 2 cut(s) 880, 1169
StyD4I CCNGG 9 cut(s) 139, 153, 171, 207, 657, 697, 2259, 2278, 2279
StyI CCWWGG 2 cut(s) 504, 1545
TaaI ACNGT 4 cut(s) 1139, 1509, 1610, 1669
TaiI ACGT 1 cut(s) 793
TatI WGTACW 3 cut(s) 868, 1669, 1881
TfiI GAWTC 2 cut(s) 2242, 2312
Tru1I TTAA 8 cut(s) 282, 390, 449, 804, 1062, 1815, 2141, 2183
Tru9I TTAA 8 cut(s) 282, 390, 449, 804, 1062, 1815, 2141, 2183
TseFI GTSAC 2 cut(s) 938, 1822
Tsp45I GTSAC 2 cut(s) 938, 1822
TspDTI ATGAA 8 cut(s) 44, 65, 704, 1061, 1343, 1399, 1642, 2208
TspGWI ACGGA 4 cut(s) 87, 177, 1336, 1964
TspMI CCCGGG 1 cut(s) 2279
Van91I CCANNNNNTGG 1 cut(s) 2026
Vha464I CTTAAG 1 cut(s) 448
VpaK11BI GGWCC 4 cut(s) 137, 169, 695, 1683
VspI ATTAAT 1 cut(s) 2183
XapI RAATTY 7 cut(s) 288, 495, 1127, 1270, 1339, 1715, 1891
XbaI TCTAGA 1 cut(s) 1364
XceI RCATGY 1 cut(s) 820
XcmI CCANNNNNNNNNTGG 1 cut(s) 658
XhoI CTCGAG 1 cut(s) 1583
XmaI CCCGGG 1 cut(s) 2279
XmnI GAANNNNTTC 2 cut(s) 1139, 1752
XspI CTAG 7 cut(s) 957, 1100, 1365, 1380, 2049, 2117, 2368
ZrmI AGTACT 1 cut(s) 1883
Zsp2I ATGCAT 1 cut(s) 1204
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.