Cyclic nucleotide-gated ion channel 1-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 1809 |
| AccIII | TCCGGA | 1 cut(s) | 1147 |
| AciI | CCGC | 3 cut(s) | 78, 891, 1467 |
| AclWI | GGATC | 2 cut(s) | 245, 764 |
| AcoI | YGGCCR | 1 cut(s) | 122 |
| AcsI | RAATTY | 4 cut(s) | 664, 1601, 1709, 1777 |
| AcuI | CTGAAG | 1 cut(s) | 1106 |
| AcyI | GRCGYC | 1 cut(s) | 1810 |
| AfaI | GTAC | 8 cut(s) | 436, 582, 713, 1218, 1365, 1495, 1519, 1721 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 511 |
| AflII | CTTAAG | 1 cut(s) | 1388 |
| AhlI | ACTAGT | 2 cut(s) | 998, 1490 |
| AleI | CACNNNNGTG | 1 cut(s) | 866 |
| AluBI | AGCT | 7 cut(s) | 175, 347, 656, 925, 1393, 1579, 1787 |
| AluI | AGCT | 7 cut(s) | 175, 347, 656, 925, 1393, 1579, 1787 |
| Alw26I | GTCTC | 1 cut(s) | 1742 |
| AlwI | GGATC | 2 cut(s) | 245, 764 |
| Ama87I | CYCGRG | 2 cut(s) | 420, 608 |
| Aor13HI | TCCGGA | 1 cut(s) | 1147 |
| AoxI | GGCC | 4 cut(s) | 122, 417, 1590, 1680 |
| ApeKI | GCWGC | 3 cut(s) | 686, 704, 1784 |
| ApoI | RAATTY | 4 cut(s) | 664, 1601, 1709, 1777 |
| AseI | ATTAAT | 1 cut(s) | 831 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 55, 1451 |
| AspLEI | GCGC | 1 cut(s) | 1812 |
| AspS9I | GGNCC | 5 cut(s) | 307, 418, 1479, 1590, 1680 |
| AsuC2I | CCSGG | 2 cut(s) | 421, 422 |
| AsuHPI | GGTGA | 2 cut(s) | 459, 1571 |
| AsuII | TTCGAA | 1 cut(s) | 49 |
| AvaI | CYCGRG | 2 cut(s) | 420, 608 |
| AvaII | GGWCC | 2 cut(s) | 307, 1479 |
| BalI | TGGCCA | 1 cut(s) | 124 |
| BanI | GGYRCC | 1 cut(s) | 1809 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 311, 343 |
| BauI | CACGAG | 1 cut(s) | 1359 |
| BbsI | GAAGAC | 3 cut(s) | 995, 1087, 1416 |
| BbvI | GCAGC | 3 cut(s) | 673, 716, 1796 |
| BccI | CCATC | 5 cut(s) | 80, 295, 1314, 1424, 1749 |
| BceAI | ACGGC | 2 cut(s) | 82, 224 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 177, 211 |
| BciVI | GTATCC | 1 cut(s) | 86 |
| BcnI | CCSGG | 2 cut(s) | 421, 422 |
| BcoDI | GTCTC | 1 cut(s) | 1742 |
| BcuI | ACTAGT | 2 cut(s) | 998, 1490 |
| BfaI | CTAG | 4 cut(s) | 999, 1491, 1635, 1728 |
| BfmI | CTRYAG | 1 cut(s) | 348 |
| BfoI | RGCGCY | 1 cut(s) | 1813 |
| BfrI | CTTAAG | 1 cut(s) | 1388 |
| BfuI | GTATCC | 1 cut(s) | 86 |
| BisI | GCNGC | 5 cut(s) | 78, 687, 705, 1468, 1785 |
| BlsI | GCNGC | 5 cut(s) | 79, 688, 706, 1469, 1786 |
| BmcAI | AGTACT | 2 cut(s) | 436, 1365 |
| Bme1390I | CCNGG | 2 cut(s) | 421, 422 |
| Bme18I | GGWCC | 2 cut(s) | 307, 1479 |
| BmeT110I | CYCGRG | 2 cut(s) | 420, 608 |
| BmgT120I | GGNCC | 5 cut(s) | 307, 418, 1479, 1590, 1680 |
| BmiI | GGNNCC | 2 cut(s) | 1437, 1811 |
| BmrFI | CCNGG | 2 cut(s) | 421, 422 |
| BmsI | GCATC | 6 cut(s) | 603, 742, 1059, 1122, 1345, 1393 |
| BoxI | GACNNNNGTC | 1 cut(s) | 999 |
| BpiI | GAAGAC | 3 cut(s) | 995, 1087, 1416 |
| Bpu14I | TTCGAA | 1 cut(s) | 49 |
| BpuEI | CTTGAG | 3 cut(s) | 434, 1463, 1628 |
| BpuMI | CCSGG | 2 cut(s) | 421, 422 |
| BsaHI | GRCGYC | 1 cut(s) | 1810 |
| BsaJI | CCNNGG | 2 cut(s) | 420, 421 |
| BsaWI | WCCGGW | 2 cut(s) | 43, 1147 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 459, 489 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 511 |
| Bse3DI | GCAATG | 1 cut(s) | 1775 |
| BseAI | TCCGGA | 1 cut(s) | 1147 |
| BseDI | CCNNGG | 2 cut(s) | 420, 421 |
| BseGI | GGATG | 3 cut(s) | 172, 678, 1360 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 511 |
| BseMI | GCAATG | 1 cut(s) | 1775 |
| BseMII | CTCAG | 5 cut(s) | 36, 51, 962, 1608, 1772 |
| BseXI | GCAGC | 3 cut(s) | 673, 716, 1796 |
| BshFI | GGCC | 4 cut(s) | 124, 419, 1592, 1682 |
| BshNI | GGYRCC | 1 cut(s) | 1809 |
| BsiHKCI | CYCGRG | 2 cut(s) | 420, 608 |
| BsiSI | CCGG | 4 cut(s) | 44, 421, 1148, 1512 |
| BslFI | GGGAC | 2 cut(s) | 218, 972 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 511 |
| BsmAI | GTCTC | 1 cut(s) | 1742 |
| BsmFI | GGGAC | 2 cut(s) | 218, 972 |
| BsmI | GAATGC | 2 cut(s) | 188, 406 |
| BsnI | GGCC | 4 cut(s) | 124, 419, 1592, 1682 |
| BsoBI | CYCGRG | 2 cut(s) | 420, 608 |
| Bsp119I | TTCGAA | 1 cut(s) | 49 |
| Bsp13I | TCCGGA | 1 cut(s) | 1147 |
| Bsp1407I | TGTACA | 1 cut(s) | 1216 |
| Bsp143I | GATC | 7 cut(s) | 250, 341, 458, 769, 1017, 1103, 1285 |
| BspACI | CCGC | 3 cut(s) | 78, 891, 1467 |
| BspANI | GGCC | 4 cut(s) | 124, 419, 1592, 1682 |
| BspCNI | CTCAG | 5 cut(s) | 35, 52, 963, 1609, 1771 |
| BspEI | TCCGGA | 1 cut(s) | 1147 |
| BspHI | TCATGA | 2 cut(s) | 1299, 1819 |
| BspLI | GGNNCC | 2 cut(s) | 1437, 1811 |
| BspPI | GGATC | 2 cut(s) | 245, 764 |
| BspQI | GCTCTTC | 3 cut(s) | 504, 1569, 1688 |
| BspT104I | TTCGAA | 1 cut(s) | 49 |
| BspT107I | GGYRCC | 1 cut(s) | 1809 |
| BspTI | CTTAAG | 1 cut(s) | 1388 |
| BsrDI | GCAATG | 1 cut(s) | 1775 |
| BsrGI | TGTACA | 1 cut(s) | 1216 |
| BssECI | CCNNGG | 2 cut(s) | 420, 421 |
| BssMI | GATC | 7 cut(s) | 250, 341, 458, 769, 1017, 1103, 1285 |
| BssNI | GRCGYC | 1 cut(s) | 1810 |
| BssSI | CACGAG | 1 cut(s) | 1359 |
| Bst2BI | CACGAG | 1 cut(s) | 1359 |
| Bst4CI | ACNGT | 8 cut(s) | 439, 580, 634, 724, 731, 779, 808, 1201 |
| Bst6I | CTCTTC | 3 cut(s) | 504, 1569, 1688 |
| BstACI | GRCGYC | 1 cut(s) | 1810 |
| BstAFI | CTTAAG | 1 cut(s) | 1388 |
| BstAUI | TGTACA | 1 cut(s) | 1216 |
| BstBI | TTCGAA | 1 cut(s) | 49 |
| BstC8I | GCNNGC | 1 cut(s) | 186 |
| BstDEI | CTNAG | 9 cut(s) | 22, 60, 151, 405, 971, 1121, 1170, 1617, 1758 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 509 |
| BstF5I | GGATG | 3 cut(s) | 172, 678, 1360 |
| BstH2I | RGCGCY | 1 cut(s) | 1813 |
| BstHHI | GCGC | 1 cut(s) | 1812 |
| BstKTI | GATC | 7 cut(s) | 253, 344, 461, 772, 1020, 1106, 1288 |
| BstMAI | GTCTC | 1 cut(s) | 1742 |
| BstMBI | GATC | 7 cut(s) | 250, 341, 458, 769, 1017, 1103, 1285 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 181, 1390, 1508 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 999 |
| BstSCI | CCNGG | 2 cut(s) | 419, 420 |
| BstSFI | CTRYAG | 1 cut(s) | 348 |
| BstV1I | GCAGC | 3 cut(s) | 673, 716, 1796 |
| BstV2I | GAAGAC | 3 cut(s) | 995, 1087, 1416 |
| BsuI | GTATCC | 1 cut(s) | 86 |
| BsuRI | GGCC | 4 cut(s) | 124, 419, 1592, 1682 |
| BtsCI | GGATG | 3 cut(s) | 172, 678, 1360 |
| BtsI | GCAGTG | 2 cut(s) | 525, 1470 |
| BtsIMutI | CAGTG | 4 cut(s) | 468, 525, 1206, 1470 |
| Cac8I | GCNNGC | 1 cut(s) | 186 |
| CciI | TCATGA | 2 cut(s) | 1299, 1819 |
| CfoI | GCGC | 1 cut(s) | 1812 |
| Cfr13I | GGNCC | 5 cut(s) | 307, 418, 1479, 1590, 1680 |
| Cfr9I | CCCGGG | 1 cut(s) | 420 |
| Csp6I | GTAC | 8 cut(s) | 435, 581, 712, 1217, 1364, 1494, 1518, 1720 |
| CviAII | CATG | 5 cut(s) | 228, 840, 1300, 1476, 1820 |
| CviQI | GTAC | 8 cut(s) | 435, 581, 712, 1217, 1364, 1494, 1518, 1720 |
| DdeI | CTNAG | 9 cut(s) | 22, 60, 151, 405, 971, 1121, 1170, 1617, 1758 |
| DinI | GGCGCC | 1 cut(s) | 1811 |
| DpnI | GATC | 7 cut(s) | 252, 343, 460, 771, 1019, 1105, 1287 |
| DpnII | GATC | 7 cut(s) | 250, 341, 458, 769, 1017, 1103, 1285 |
| DraI | TTTAAA | 1 cut(s) | 789 |
| EaeI | YGGCCR | 1 cut(s) | 122 |
| Eam1104I | CTCTTC | 3 cut(s) | 504, 1569, 1688 |
| EarI | CTCTTC | 3 cut(s) | 504, 1569, 1688 |
| Eco47I | GGWCC | 2 cut(s) | 307, 1479 |
| Eco57I | CTGAAG | 1 cut(s) | 1106 |
| Eco88I | CYCGRG | 2 cut(s) | 420, 608 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 509 |
| EcoT22I | ATGCAT | 1 cut(s) | 367 |
| EgeI | GGCGCC | 1 cut(s) | 1811 |
| EheI | GGCGCC | 1 cut(s) | 1811 |
| FaeI | CATG | 5 cut(s) | 231, 843, 1303, 1479, 1823 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1439, 1471 |
| FaqI | GGGAC | 2 cut(s) | 218, 972 |
| FatI | CATG | 5 cut(s) | 227, 839, 1299, 1475, 1819 |
| FauNDI | CATATG | 1 cut(s) | 361 |
| Fnu4HI | GCNGC | 5 cut(s) | 78, 687, 705, 1468, 1785 |
| FokI | GGATG | 3 cut(s) | 179, 665, 1367 |
| Fsp4HI | GCNGC | 5 cut(s) | 78, 687, 705, 1468, 1785 |
| FspBI | CTAG | 4 cut(s) | 999, 1491, 1635, 1728 |
| GlaI | GCGC | 1 cut(s) | 1811 |
| GluI | GCNGC | 5 cut(s) | 78, 687, 705, 1468, 1785 |
| HaeII | RGCGCY | 1 cut(s) | 1813 |
| HaeIII | GGCC | 4 cut(s) | 124, 419, 1592, 1682 |
| HapII | CCGG | 4 cut(s) | 44, 421, 1148, 1512 |
| HhaI | GCGC | 1 cut(s) | 1812 |
| Hin1I | GRCGYC | 1 cut(s) | 1810 |
| Hin1II | CATG | 5 cut(s) | 231, 843, 1303, 1479, 1823 |
| Hin6I | GCGC | 1 cut(s) | 1810 |
| HinP1I | GCGC | 1 cut(s) | 1810 |
| HincII | GTYRAC | 1 cut(s) | 727 |
| HindII | GTYRAC | 1 cut(s) | 727 |
| HindIII | AAGCTT | 2 cut(s) | 173, 923 |
| HinfI | GANTC | 7 cut(s) | 5, 20, 542, 1144, 1639, 1648, 1735 |
| HpaII | CCGG | 4 cut(s) | 44, 421, 1148, 1512 |
| HphI | GGTGA | 2 cut(s) | 459, 1571 |
| Hpy166II | GTNNAC | 3 cut(s) | 307, 727, 1118 |
| Hpy188I | TCNGA | 7 cut(s) | 61, 117, 399, 720, 972, 1015, 1618 |
| Hpy188III | TCNNGA | 7 cut(s) | 196, 992, 1148, 1300, 1427, 1645, 1820 |
| Hpy8I | GTNNAC | 3 cut(s) | 307, 727, 1118 |
| Hpy99I | CGWCG | 1 cut(s) | 287 |
| HpyAV | CCTTC | 6 cut(s) | 482, 515, 685, 1081, 1283, 1658 |
| HpyCH4III | ACNGT | 8 cut(s) | 439, 580, 634, 724, 731, 779, 808, 1201 |
| HpyCH4IV | ACGT | 2 cut(s) | 330, 1816 |
| HpyCH4V | TGCA | 8 cut(s) | 233, 365, 943, 1135, 1232, 1358, 1475, 1553 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 181, 1390, 1508 |
| HpyF3I | CTNAG | 9 cut(s) | 22, 60, 151, 405, 971, 1121, 1170, 1617, 1758 |
| HpySE526I | ACGT | 2 cut(s) | 330, 1816 |
| Hsp92I | GRCGYC | 1 cut(s) | 1810 |
| Hsp92II | CATG | 5 cut(s) | 231, 843, 1303, 1479, 1823 |
| HspAI | GCGC | 1 cut(s) | 1810 |
| KasI | GGCGCC | 1 cut(s) | 1809 |
| Kpn2I | TCCGGA | 1 cut(s) | 1147 |
| Kzo9I | GATC | 7 cut(s) | 250, 341, 458, 769, 1017, 1103, 1285 |
| LguI | GCTCTTC | 3 cut(s) | 504, 1569, 1688 |
| LmnI | GCTCC | 1 cut(s) | 701 |
| Lsp1109I | GCAGC | 3 cut(s) | 673, 716, 1796 |
| LweI | GCATC | 6 cut(s) | 603, 742, 1059, 1122, 1345, 1393 |
| MaeI | CTAG | 4 cut(s) | 999, 1491, 1635, 1728 |
| MaeII | ACGT | 2 cut(s) | 330, 1816 |
| MaeIII | GTNAC | 8 cut(s) | 142, 331, 465, 514, 736, 1268, 1396, 1459 |
| MalI | GATC | 7 cut(s) | 252, 343, 460, 771, 1019, 1105, 1287 |
| MboI | GATC | 7 cut(s) | 250, 341, 458, 769, 1017, 1103, 1285 |
| MfeI | CAATTG | 1 cut(s) | 1745 |
| MlsI | TGGCCA | 1 cut(s) | 124 |
| MluNI | TGGCCA | 1 cut(s) | 124 |
| Mly113I | GGCGCC | 1 cut(s) | 1810 |
| MlyI | GAGTC | 4 cut(s) | 14, 1633, 1642, 1744 |
| MmeI | TCCRAC | 1 cut(s) | 725 |
| Mox20I | TGGCCA | 1 cut(s) | 124 |
| Mph1103I | ATGCAT | 1 cut(s) | 367 |
| MroI | TCCGGA | 1 cut(s) | 1147 |
| MroXI | GAANNNNTTC | 2 cut(s) | 55, 1451 |
| MscI | TGGCCA | 1 cut(s) | 124 |
| MslI | CAYNNNNRTG | 2 cut(s) | 15, 866 |
| Msp20I | TGGCCA | 1 cut(s) | 124 |
| MspCI | CTTAAG | 1 cut(s) | 1388 |
| MspI | CCGG | 4 cut(s) | 44, 421, 1148, 1512 |
| MspR9I | CCNGG | 2 cut(s) | 421, 422 |
| MunI | CAATTG | 1 cut(s) | 1745 |
| Mva1269I | GAATGC | 2 cut(s) | 188, 406 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 181, 1390, 1508 |
| NarI | GGCGCC | 1 cut(s) | 1810 |
| NciI | CCSGG | 2 cut(s) | 421, 422 |
| NdeI | CATATG | 1 cut(s) | 361 |
| NdeII | GATC | 7 cut(s) | 250, 341, 458, 769, 1017, 1103, 1285 |
| NlaIII | CATG | 5 cut(s) | 231, 843, 1303, 1479, 1823 |
| NlaIV | GGNNCC | 2 cut(s) | 1437, 1811 |
| NmuCI | GTSAC | 3 cut(s) | 465, 736, 1459 |
| NsiI | ATGCAT | 1 cut(s) | 367 |
| NspV | TTCGAA | 1 cut(s) | 49 |
| OliI | CACNNNNGTG | 1 cut(s) | 866 |
| PagI | TCATGA | 2 cut(s) | 1299, 1819 |
| PciSI | GCTCTTC | 3 cut(s) | 504, 1569, 1688 |
| PctI | GAATGC | 2 cut(s) | 188, 406 |
| PdmI | GAANNNNTTC | 2 cut(s) | 55, 1451 |
| PfeI | GAWTC | 2 cut(s) | 542, 1144 |
| PkrI | GCNGC | 5 cut(s) | 79, 688, 706, 1469, 1786 |
| PleI | GAGTC | 4 cut(s) | 14, 1633, 1642, 1743 |
| PluTI | GGCGCC | 1 cut(s) | 1813 |
| PpsI | GAGTC | 4 cut(s) | 14, 1633, 1642, 1743 |
| PshAI | GACNNNNGTC | 1 cut(s) | 999 |
| PshBI | ATTAAT | 1 cut(s) | 831 |
| PspN4I | GGNNCC | 2 cut(s) | 1437, 1811 |
| PspPI | GGNCC | 5 cut(s) | 307, 418, 1479, 1590, 1680 |
| RsaI | GTAC | 8 cut(s) | 436, 582, 713, 1218, 1365, 1495, 1519, 1721 |
| RsaNI | GTAC | 8 cut(s) | 435, 581, 712, 1217, 1364, 1494, 1518, 1720 |
| RseI | CAYNNNNRTG | 2 cut(s) | 15, 866 |
| SapI | GCTCTTC | 3 cut(s) | 504, 1569, 1688 |
| SatI | GCNGC | 5 cut(s) | 78, 687, 705, 1468, 1785 |
| Sau3AI | GATC | 7 cut(s) | 250, 341, 458, 769, 1017, 1103, 1285 |
| Sau96I | GGNCC | 5 cut(s) | 307, 418, 1479, 1590, 1680 |
| ScaI | AGTACT | 2 cut(s) | 436, 1365 |
| SchI | GAGTC | 4 cut(s) | 14, 1633, 1642, 1744 |
| ScrFI | CCNGG | 2 cut(s) | 421, 422 |
| SfaNI | GCATC | 6 cut(s) | 603, 742, 1059, 1122, 1345, 1393 |
| SfcI | CTRYAG | 1 cut(s) | 348 |
| SfoI | GGCGCC | 1 cut(s) | 1811 |
| SfuI | TTCGAA | 1 cut(s) | 49 |
| SinI | GGWCC | 2 cut(s) | 307, 1479 |
| SmaI | CCCGGG | 1 cut(s) | 422 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 15, 866 |
| SmlI | CTYRAG | 4 cut(s) | 413, 1388, 1442, 1643 |
| SmoI | CTYRAG | 4 cut(s) | 413, 1388, 1442, 1643 |
| SpeI | ACTAGT | 2 cut(s) | 998, 1490 |
| SsiI | CCGC | 3 cut(s) | 78, 891, 1467 |
| SspDI | GGCGCC | 1 cut(s) | 1809 |
| SspI | AATATT | 1 cut(s) | 802 |
| SspMI | CTAG | 4 cut(s) | 999, 1491, 1635, 1728 |
| StyD4I | CCNGG | 2 cut(s) | 419, 420 |
| TaaI | ACNGT | 8 cut(s) | 439, 580, 634, 724, 731, 779, 808, 1201 |
| TaiI | ACGT | 2 cut(s) | 333, 1819 |
| TaqI | TCGA | 5 cut(s) | 49, 197, 1028, 1288, 1662 |
| TaqII | GACCGA | 1 cut(s) | 324 |
| TatI | WGTACW | 3 cut(s) | 434, 1216, 1363 |
| TauI | GCSGC | 2 cut(s) | 80, 1470 |
| TfiI | GAWTC | 2 cut(s) | 542, 1144 |
| TscAI | CASTG | 4 cut(s) | 468, 532, 1206, 1477 |
| TseFI | GTSAC | 3 cut(s) | 465, 736, 1459 |
| TseI | GCWGC | 3 cut(s) | 686, 704, 1784 |
| Tsp45I | GTSAC | 3 cut(s) | 465, 736, 1459 |
| TspDTI | ATGAA | 6 cut(s) | 167, 473, 667, 1157, 1521, 1836 |
| TspGWI | ACGGA | 1 cut(s) | 176 |
| TspMI | CCCGGG | 1 cut(s) | 420 |
| TspRI | CASTG | 4 cut(s) | 468, 532, 1206, 1477 |
| Vha464I | CTTAAG | 1 cut(s) | 1388 |
| VpaK11BI | GGWCC | 2 cut(s) | 307, 1479 |
| VspI | ATTAAT | 1 cut(s) | 831 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 509 |
| XapI | RAATTY | 4 cut(s) | 664, 1601, 1709, 1777 |
| XmaI | CCCGGG | 1 cut(s) | 420 |
| XmnI | GAANNNNTTC | 2 cut(s) | 55, 1451 |
| XspI | CTAG | 4 cut(s) | 999, 1491, 1635, 1728 |
| ZrmI | AGTACT | 2 cut(s) | 436, 1365 |
| Zsp2I | ATGCAT | 1 cut(s) | 367 |