Rw1G021150

Cyclic nucleotide-gated ion channel 1-like

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
Physical Location & Seq
Forward (+)
45168640 .. 45175495
6856 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G021150.1

Sequence Viewer

Length: 1908 bp
ATGTCTTCAGACATGTTCAAGCGGGCCAATGATGCAGTATTAATTCAGCTAAGAAATTTTAATGAGAGTACTTTAGAGGAGGAATCTGACAAGGAAGATGGAAAGGGACCAACAGTAGAGGAAATTCTTAAAGCACGAGATAAGGCAATGCACTGGTGGAATACATTCTTCATTATGGTCTGTGCATTTGGCGTCTTCATTGATCCTTTGTTCTGTTATATCCATGTCATTGAAAAGGTGACGTGCGTCTCCTACGATCTGAAAGCGGTCTGGACATATTTTGGTCTGCGAATGGCCATTGATGTCTTTTATGTTATCGACATTATCATTTTCTTATGTGGAATCTGTAAGAAACGTCAGGGTAAGAAAAAATTTGGGGCATGCTGCTGCAAGCCAATAACTGTGAAAAAGTTGACAGTAATTTCTTTGAAACAAGTAATCAAAAGATGGTGCTTGTTATCAATCCTGCCTCGCATTTTGGTCGCCCTTCCCATTCCAGAGGGACTCCTGGTCTGTGCATTTTACATGGGCTTTGATCCAATTTATGCTATCTTTGTCATCGTTCCTTTCCAATATACGTTAAGGATTTTTCTTATCTATGGATCAAAAAGATGGCATCCTATCAAAGAGACTGCAACAGGAAGATGGCTTAAACCATTGTTGGATTTTCTTCCATTCATCCTTGCTTCTCATCTATTTGGAGCGTTGTGGTACCGTCTTGCTGTACAAAGACAAATAGATTGTTGGAAGCCATATTGTCAAGTTCGTGGAGGTGGTCGCTGTACAGGAATTAAAGACTTTACCTGTGCCAATTGGAAAGGGGATATCAAAACTATGCAAAAATCGTGCCCAACAGATAGTGAAGATAAAAACGTTTTTGACTTTGGTATATATTTTTATGCTCTTCAATCTAATTCCACGGGTTCATTCAATCTTCCGCAAAGAATCTCGCAATCTTTTTGGTGGGCTCTACGAAATCTCAGTTCTTTTGGTTCAAATCTCCCGACCAGCATGCATACCTTGGAAATCTTCTTTTCAATTGTGATATCTATAAGTGGCATGGCGCTATTTTTAGTATATCTCAATGCAAGAGTAAAGGAGTCCCAGGAAAGATTTGCTCAGCTTAAACTGAAAGAAAGGAAGCATTTGATGAAACCGGATATAGATTTGTGGTTATCTAAAAATGTCTTTAAGTTGAAGACTATGACCAAGGACTCGGAAGTTTTGAAGAAGAGGAACAAAAAGAAGAAGGCTTTGAAGACGGTGATCATTGAAAACATACACAAACTTGACGAAAACAGAGCTATTGATGTGCAAAATATCATTTTTATTATTCCTATAAAATACAGAAGAAGCATCAAGCGTCTTCTTTGTTTGGCTTCACTAAGAAAAGTGCCGATGCTTGCAAATTTGAATGAGAAAATGTTGAAAGTGATTTGTGAGCATCTGAAGCCGGTCATTTACATCGAAGACAACTACATTGTTAAAGAGGGGAAACCACTTAGGATGATGCTATTCATCACGCAAGGCATCGCATACACAATTGGTAATAACGATGGTGTAGAAACAAGCTGTGGTTCCTCAAGCAGTAAGTGGTTAAAGCGAGGTGATTATTACGGAGAAGAGCTTTTGAACTGGGCATTCAAATGTCCCTCCTATTCTGACTTACCCATCTCAACTAGAACTGTTATGTCCCAAGAAAAGATCGAAGGATTTGCTCTTAGGGCTAGCGACCTAAAGAACATTGTGTCTATATATTGGTGGCATTTTAGCAGAAAGCAGCTACCTGAAGCAGAGCTCGAGCAGTGGGAGAATTTAGCAGCTTCTTCGCTACAAGCAGCCTGGCGCAGCTGGCTGGCAAGGGCTAGGCACTTAAATGGCAGGGACAAAATTAAATCAAAGGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

635

Amino Acids

73.62

Weight (kDa)

9.48

Isoelectric Point (pI)

47.61

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000017)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07351 FvH4_1g11800 FvH4_1g11800 FvH4_1g11800 FvH4_1g11800 FvH4_1g11800 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_1g22250 FvH4_4g14360 FvH4_6g13561 FvH4_6g13562 FvH4_6g13580 FvH4_6g13590 FvH4_6g13590 FvH4_6g13590 FvH4_6g13731 FvH4_6g13770 FvH4_6g13800 FvH4_6g13800 FvH4_6g13860 FvH4_6g13870 FvH4_6g13870 FvH4_6g13870 FvH4_6g13870 FvH4_6g13870 FvH4_6g13890 FvH4_6g33801 FvH4_7g13020 FvH4_7g13270 FvH4_7g13270 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g13280 FvH4_7g14580 FvH4_7g14580 FvH4_7g14580 FvH4_7g14600 FvH4_7g14600 FvH4_7g20030 FvH4_7g20510 FvH4_7g20510 FvH4_7g20510 FvH4_7g20670 FvH4_7g20670 FvH4_7g20670 FvH4_7g20670 FvH4_7g20690 FvH4_7g20690 FvH4_7g31930 FvH4_7g31930 FvH4_7g31940 FvH4_7g31940
malus_domestica MD01G1115700.v1.1 MD01G1115800.v1.1 MD01G1116600.v1.1 MD01G1116700.v1.1 MD01G1117000.v1.1 MD01G1225000.v1.1 MD02G1077900.v1.1 MD02G1078000.v1.1 MD02G1078200.v1.1 MD02G1078400.v1.1 MD02G1084300.v1.1 MD04G1004700.v1.1 MD04G1123100.v1.1 MD04G1123200.v1.1 MD04G1128000.v1.1 MD04G1128400.v1.1 MD05G1299700.v1.1 MD05G1300000.v1.1 MD07G1184000.v1.1 MD07G1292300.v1.1 MD08G1214800.v1.1
prunus_persica Prupe.1G205100_v2.0.a1 Prupe.1G205100_v2.0.a1 Prupe.1G205200_v2.0.a1 Prupe.2G222300_v2.0.a1 Prupe.2G223300_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223500_v2.0.a1 Prupe.2G223600_v2.0.a1 Prupe.2G223600_v2.0.a1 Prupe.2G223600_v2.0.a1 Prupe.2G223700_v2.0.a1 Prupe.2G223700_v2.0.a1 Prupe.2G223700_v2.0.a1 Prupe.2G223700_v2.0.a1 Prupe.2G223800_v2.0.a1 Prupe.2G223900_v2.0.a1 Prupe.2G224000_v2.0.a1 Prupe.5G162000_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G254400_v2.0.a1 Prupe.6G291000_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G057700_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G073200_v2.0.a1 Prupe.7G210400_v2.0.a1 Prupe.7G210600_v2.0.a1 Prupe.7G210700_v2.0.a1 Prupe.7G210800_v2.0.a1 Prupe.7G210900_v2.0.a1 Prupe.8G097600_v2.0.a1 Prupe.8G097800_v2.0.a1 Prupe.8G097800_v2.0.a1
pyrus_communis pycom01g14430 pycom01g14440 pycom01g23130 pycom01g23160 pycom01g23330 pycom02g06210 pycom02g06220 pycom02g06250 pycom02g06270 pycom02g06710 pycom03g05360 pycom03g05380 pycom04g11470 pycom04g11480 pycom04g11520 pycom04g11560 pycom04g11600 pycom04g11610 pycom04g11650 pycom04g11660 pycom04g11670 pycom05g27790 pycom07g17630 pycom08g20960 pycom126g00020 pycom126g00030
rosa_chinensis RchiOBHm_Chr1g0318251 RchiOBHm_Chr1g0318731 RchiOBHm_Chr1g0339101 RchiOBHm_Chr1g0339111 RchiOBHm_Chr1g0347151 RchiOBHm_Chr1g0347161 RchiOBHm_Chr1g0347221 RchiOBHm_Chr1g0352401 RchiOBHm_Chr1g0352441 RchiOBHm_Chr1g0352461 RchiOBHm_Chr1g0356131 RchiOBHm_Chr1g0363991 RchiOBHm_Chr1g0364791 RchiOBHm_Chr1g0364801 RchiOBHm_Chr1g0364811 RchiOBHm_Chr1g0364851 RchiOBHm_Chr1g0364951 RchiOBHm_Chr1g0370821 RchiOBHm_Chr1g0381221 RchiOBHm_Chr1g0381231 RchiOBHm_Chr1g0381261 RchiOBHm_Chr1g0381271 RchiOBHm_Chr1g0381341 RchiOBHm_Chr1g0381351 RchiOBHm_Chr1g0381391 RchiOBHm_Chr1g0381801 RchiOBHm_Chr1g0381821 RchiOBHm_Chr2g0093241 RchiOBHm_Chr2g0116391 RchiOBHm_Chr3g0466441 RchiOBHm_Chr3g0466631 RchiOBHm_Chr3g0466651 RchiOBHm_Chr3g0496921 RchiOBHm_Chr4g0400441 RchiOBHm_Chr4g0400501 RchiOBHm_Chr4g0400511 RchiOBHm_Chr4g0400691 RchiOBHm_Chr4g0400701 RchiOBHm_Chr4g0404331 RchiOBHm_Chr5g0052101 RchiOBHm_Chr5g0052111 RchiOBHm_Chr5g0052171 RchiOBHm_Chr5g0052181 RchiOBHm_Chr6g0264161 RchiOBHm_Chr6g0265551 RchiOBHm_Chr7g0213571 RchiOBHm_Chr7g0213581
rosa_laevigata RLG00000002796 RLG00000003261 RLG00000007935 RLG00000007936 RLG00000009187 RLG00000014179 RLG00000016381 RLG00000018265 RLG00000024558 RLG00000024574 RLG00000026232 RLG00000026234 RLG00000026236 RLG00000026237 RLG00000027459 RLG00000027461 RLG00000027463 RLG00000027530 RLG00000028103 RLG00000028304 RLG00000028333 RLG00000029214 RLG00000029848 RLG00000029951 RLG00000030115 RLG00000030552 RLG00000033668 RLG00000034840 RLG00000034841 RLG00000034842 RLG00000035830
rosa_multiflora Rmu_sc0000654.1_g000004 Rmu_sc0000675.1_g000025 Rmu_sc0001075.1_g000002 Rmu_sc0001726.1_g000004 Rmu_sc0001772.1_g000061 Rmu_sc0001772.1_g000065 Rmu_sc0002067.1_g000002 Rmu_sc0002183.1_g000001 Rmu_sc0002183.1_g000006 Rmu_sc0002244.1_g000003 Rmu_sc0002313.1_g000004 Rmu_sc0002319.1_g000004 Rmu_sc0002539.1_g000085 Rmu_sc0002636.1_g000004 Rmu_sc0003229.1_g000007 Rmu_sc0003313.1_g000020 Rmu_sc0003546.1_g000007 Rmu_sc0003724.1_g000015 Rmu_sc0003936.1_g000029 Rmu_sc0004191.1_g000067 Rmu_sc0004525.1_g000012 Rmu_sc0005122.1_g000009 Rmu_sc0005255.1_g000040 Rmu_sc0005338.1_g000016 Rmu_sc0005584.1_g000008 Rmu_sc0006460.1_g000013 Rmu_sc0006872.1_g000011 Rmu_sc0006872.1_g000015 Rmu_sc0006872.1_g000016 Rmu_sc0006952.1_g000013 Rmu_sc0007342.1_g000005 Rmu_sc0007342.1_g000006 Rmu_sc0008418.1_g000003 Rmu_sc0008418.1_g000006 Rmu_sc0008636.1_g000007 Rmu_sc0008636.1_g000008 Rmu_sc0009205.1_g000014 Rmu_sc0009365.1_g000014 Rmu_sc0009917.1_g000002 Rmu_sc0019289.1_g000003 Rmu_ssc0000098.1_g000011 Rmu_ssc0000098.1_g000012 Rmu_ssc0000167.1_g000018 Rmu_ssc0000167.1_g000024 Rmu_ssc0000326.1_g000015
rosa_roxburghii Rroxscaffold_166G00440780 Rroxscaffold_176G00431500 Rroxscaffold_1G00015080 Rroxscaffold_1G00027880 Rroxscaffold_1G00027890 Rroxscaffold_1G00027920 Rroxscaffold_2G00127250 Rroxscaffold_2G00148380 Rroxscaffold_3G00219450 Rroxscaffold_3G00232170 Rroxscaffold_3G00232210 Rroxscaffold_3G00242230 Rroxscaffold_3G00242240 Rroxscaffold_3G00244790 Rroxscaffold_3G00245790 Rroxscaffold_4G00278400 Rroxscaffold_4G00278430 Rroxscaffold_4G00278670 Rroxscaffold_4G00278680 Rroxscaffold_4G00278690 Rroxscaffold_4G00278700 Rroxscaffold_4G00278720 Rroxscaffold_4G00291690 Rroxscaffold_4G00292070 Rroxscaffold_4G00292090 Rroxscaffold_4G00292770 Rroxscaffold_4G00302240 Rroxscaffold_4G00302860 Rroxscaffold_4G00311320 Rroxscaffold_4G00311330 Rroxscaffold_4G00320570 Rroxscaffold_4G00322050 Rroxscaffold_4G00329480 Rroxscaffold_4G00329730 Rroxscaffold_5G00345500 Rroxscaffold_5G00345510 Rroxscaffold_5G00360830 Rroxscaffold_5G00360840 Rroxscaffold_6G00393450 Rroxscaffold_6G00404030 Rroxscaffold_6G00414220 Rroxscaffold_6G00414230 Rroxscaffold_6G00414280 Rroxscaffold_6G00414290 Rroxscaffold_6G00414350 Rroxscaffold_6G00414470 Rroxscaffold_7G00202570 Rroxscaffold_7G00203460 Rroxscaffold_7G00203470
rosa_rugosa Rorug01G0020500 Rorug01G0020600 Rorug01G0020700 Rorug01G0143700.1 Rorug01G0225700 Rorug01G0228500 Rorug01G0228600 Rorug01G0228600 Rorug01G0228700 Rorug01G0228800 Rorug01G0228800 Rorug01G0229000 Rorug01G0229300 Rorug01G0229400 Rorug01G0229600 Rorug01G0229700 Rorug01G0232200 Rorug01G0232600 Rorug01G0232600 Rorug01G0311900 Rorug01G0311900 Rorug01G0318400 Rorug01G0318500 Rorug01G0318500 Rorug01G0318500 Rorug01G0427900 Rorug01G0427900 Rorug01G0428000 Rorug01G0428200 Rorug01G0428300 Rorug01G0428400 Rorug01G0431500 Rorug01G0431600 Rorug01G0431600 Rorug02G0033800 Rorug02G0206300 Rorug03G0081900 Rorug03G0083200 Rorug03G0083200 Rorug03G0083300 Rorug04G0025100 Rorug04G0025100 Rorug04G0025200 Rorug04G0025300 Rorug04G0058600 Rorug04G0058700 Rorug04G0058800 Rorug04G0098400 Rorug04G0098500 Rorug05G0274500 Rorug05G0274600 Rorug05G0274800 Rorug06G0008500 Rorug06G0009100 Rorug06G0018000
rosa_samantha Rh1AG031700 Rh1AG036100 Rh1AG089800 Rh1AG239800 Rh1AG239900 Rh1AG242000 Rh1AG242300 Rh1AG245600 Rh1AG262600 Rh1AG319700 Rh1AG319800 Rh1AG319900 Rh1AG327200 Rh1AG451100 Rh1AG451200 Rh1AG451300 Rh1AG451600 Rh1AG451700 Rh1BG027200 Rh1BG071600 Rh1BG090700 Rh1BG211000 Rh1BG213000 Rh1BG213500 Rh1BG282800 Rh1BG288400 Rh1BG408100 Rh1BG408200 Rh1BG408400 Rh1BG408700 Rh1CG026300 Rh1CG028300 Rh1CG224100 Rh1CG226000 Rh1CG226100 Rh1CG229300 Rh1CG229400 Rh1CG245900 Rh1CG299200 Rh1CG299400 Rh1CG299500 Rh1CG303300 Rh1CG305100 Rh1CG422500 Rh1CG422600 Rh1CG422700 Rh1CG422800 Rh1CG422900 Rh1CG423100 Rh1CG423300 Rh1CG423400 Rh1CG426300 Rh1CG426600 Rh1DG239300 Rh1DG239600 Rh1DG258300 Rh1DG314200 Rh1DG314300 Rh1DG314400 Rh1DG320000 Rh1DG439200 Rh1DG439400 Rh1DG439500 Rh1DG439700 Rh1DG440000 Rh1DG443800 Rh2AG261800 Rh2BG080900 Rh2CG083300 Rh2DG078900 Rh2DG270000 Rh2DG270100 Rh3AG128400 Rh3AG130100 Rh3AG130500 Rh3AG332500 Rh3AG332600 Rh3AG332800 Rh3BG149700 Rh3BG151500 Rh3CG151400 Rh3CG354500 Rh3CG366800 Rh3DG150500 Rh3DG152200 Rh4AG101400 Rh4AG102900 Rh4AG148300 Rh4AG148600 Rh4BG098000 Rh4CG111100 Rh4CG111300 Rh4CG155100 Rh4DG094800 Rh5AG213600 Rh5AG346900 Rh5AG347000 Rh5BG357500 Rh5BG357700 Rh5BG485400 Rh5CG383100 Rh5CG383200 Rh5CG383300 Rh5CG509900 Rh5DG373000 Rh5DG373200 Rh6BG054300 Rh6BG126300 Rh6CG125100 Rh6CG185300 Rh6DG177000 Rh7AG276100 Rh7AG276200 Rh7BG230500 Rh7BG270500 Rh7BG364000 Rh7CG250100 Rh7CG295200 Rh7CG295300 Rh7DG389700
rosa_wichuraiana Rw0G001190 Rw0G010680 Rw0G013360 Rw0G014310 Rw0G014890 Rw0G020310 Rw0G021350 Rw0G022510 Rw1G003360 Rw1G004330 Rw1G006930 Rw1G008310 Rw1G021090 Rw1G021150 Rw1G021210 Rw1G023200 Rw1G023210 Rw1G028340 Rw1G028350 Rw1G028990 Rw1G032510 Rw1G039370 Rw1G039400 Rw1G039410 Rw1G039420 Rw1G039430 Rw2G006700 Rw2G020550 Rw2G020580 Rw3G012130 Rw3G012300 Rw3G012310 Rw3G028220 Rw3G029230 Rw5G021600 Rw5G032790 Rw6G011240 Rw7G027670 Rw7G032780

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 711
AccB1I GGYRCC 1 cut(s) 711
AciI CCGC 3 cut(s) 22, 266, 938
AclI AACGTT 1 cut(s) 873
AclWI GGATC 3 cut(s) 197, 530, 610
AcoI YGGCCR 1 cut(s) 294
AcsI RAATTY 5 cut(s) 55, 123, 371, 1408, 1813
AcuI CTGAAG 2 cut(s) 1469, 1809
AcyI GRCGYC 1 cut(s) 192
AfaI GTAC 4 cut(s) 70, 713, 726, 784
AflIII ACRYGT 1 cut(s) 12
AhdI GACNNNNNGTC 1 cut(s) 509
AjiI CACGTC 1 cut(s) 243
AjnI CCWGG 3 cut(s) 507, 1104, 1841
AluBI AGCT 9 cut(s) 49, 1123, 1304, 1572, 1627, 1783, 1798, 1823, 1851
AluI AGCT 9 cut(s) 49, 1123, 1304, 1572, 1627, 1783, 1798, 1823, 1851
Alw21I GWGCWC 1 cut(s) 1800
Alw26I GTCTC 2 cut(s) 253, 623
AlwI GGATC 3 cut(s) 197, 530, 610
Ama87I CYCGRG 1 cut(s) 1799
AoxI GGCC 2 cut(s) 24, 294
ApeKI GCWGC 6 cut(s) 384, 387, 1780, 1820, 1838, 1848
ApoI RAATTY 5 cut(s) 55, 123, 371, 1408, 1813
AseI ATTAAT 1 cut(s) 41
Asp700I GAANNNNTTC 1 cut(s) 164
Asp718I GGTACC 1 cut(s) 711
AspLEI GCGC 2 cut(s) 1066, 1848
AspS9I GGNCC 2 cut(s) 24, 107
AsuHPI GGTGA 3 cut(s) 250, 1276, 1619
AsuNHI GCTAGC 1 cut(s) 1727
AvaI CYCGRG 1 cut(s) 1799
AvaII GGWCC 1 cut(s) 107
BaeGI GKGCMC 1 cut(s) 851
BalI TGGCCA 1 cut(s) 296
BanI GGYRCC 1 cut(s) 711
BanII GRGCYC 2 cut(s) 970, 1800
BauI CACGAG 1 cut(s) 135
BbsI GAAGAC 5 cut(s) 187, 1205, 1265, 1358, 1476
Bbv12I GWGCWC 1 cut(s) 1800
BbvI GCAGC 6 cut(s) 371, 374, 1792, 1832, 1850, 1860
BccI CCATC 6 cut(s) 92, 441, 606, 639, 1550, 1679
BcgI CGANNNNNNTGC 8 cut(s) 463, 497, 994, 1028, 1697, 1731, 1809, 1843
BciT130I CCWGG 3 cut(s) 509, 1106, 1843
BclI TGATCA 1 cut(s) 1266
BcoDI GTCTC 2 cut(s) 253, 623
BfaI CTAG 3 cut(s) 1680, 1728, 1866
BfoI RGCGCY 1 cut(s) 1067
BisI GCNGC 6 cut(s) 385, 388, 1781, 1821, 1839, 1849
BlpI GCTNAGC 1 cut(s) 1119
BlsI GCNGC 6 cut(s) 386, 389, 1782, 1822, 1840, 1850
BmcAI AGTACT 1 cut(s) 70
Bme1390I CCNGG 3 cut(s) 509, 1106, 1843
Bme18I GGWCC 1 cut(s) 107
BmeRI GACNNNNNGTC 1 cut(s) 509
BmeT110I CYCGRG 1 cut(s) 1799
BmgBI CACGTC 1 cut(s) 243
BmgT120I GGNCC 2 cut(s) 24, 107
BmiI GGNNCC 3 cut(s) 108, 713, 1579
BmrFI CCNGG 3 cut(s) 509, 1106, 1843
BmrI ACTGGG 1 cut(s) 1645
BmsI GCATC 7 cut(s) 22, 625, 1365, 1389, 1453, 1500, 1539
BmtI GCTAGC 1 cut(s) 1731
BmuI ACTGGG 1 cut(s) 1645
BoxI GACNNNNGTC 1 cut(s) 245
BpiI GAAGAC 5 cut(s) 187, 1205, 1265, 1358, 1476
Bpu1102I GCTNAGC 1 cut(s) 1119
BpuEI CTTGAG 1 cut(s) 1567
BsaHI GRCGYC 1 cut(s) 192
BsaJI CCNNGG 4 cut(s) 918, 1020, 1104, 1209
BsaWI WCCGGW 1 cut(s) 1156
Bse118I RCCGGY 1 cut(s) 1453
Bse1I ACTGG 2 cut(s) 158, 1640
Bse3DI GCAATG 1 cut(s) 153
BseBI CCWGG 3 cut(s) 509, 1106, 1843
BseDI CCNNGG 4 cut(s) 918, 1020, 1104, 1209
BseGI GGATG 3 cut(s) 616, 678, 1512
BseMI GCAATG 1 cut(s) 153
BseMII CTCAG 2 cut(s) 994, 1133
BseNI ACTGG 2 cut(s) 158, 1640
BseRI GAGGAG 1 cut(s) 92
BseSI GKGCMC 1 cut(s) 851
BseXI GCAGC 6 cut(s) 371, 374, 1792, 1832, 1850, 1860
BshFI GGCC 2 cut(s) 26, 296
BshNI GGYRCC 1 cut(s) 711
BsiHKAI GWGCWC 1 cut(s) 1800
BsiHKCI CYCGRG 1 cut(s) 1799
BsiSI CCGG 2 cut(s) 1157, 1454
BslFI GGGAC 6 cut(s) 120, 516, 1087, 1635, 1678, 1898
BsmAI GTCTC 2 cut(s) 253, 623
BsmBI CGTCTC 1 cut(s) 253
BsmFI GGGAC 6 cut(s) 120, 516, 1087, 1635, 1678, 1898
BsmI GAATGC 1 cut(s) 1640
BsnI GGCC 2 cut(s) 26, 296
BsoBI CYCGRG 1 cut(s) 1799
Bsp1286I GDGCHC 3 cut(s) 851, 970, 1800
Bsp1407I TGTACA 2 cut(s) 724, 782
Bsp143I GATC 6 cut(s) 202, 256, 535, 602, 1266, 1704
Bsp1720I GCTNAGC 1 cut(s) 1119
BspACI CCGC 3 cut(s) 22, 266, 938
BspANI GGCC 2 cut(s) 26, 296
BspCNI CTCAG 2 cut(s) 993, 1132
BspLI GGNNCC 3 cut(s) 108, 713, 1579
BspOI GCTAGC 1 cut(s) 1731
BspPI GGATC 3 cut(s) 197, 530, 610
BspQI GCTCTTC 2 cut(s) 909, 1617
BspT107I GGYRCC 1 cut(s) 711
BsrDI GCAATG 1 cut(s) 153
BsrFI RCCGGY 1 cut(s) 1453
BsrGI TGTACA 2 cut(s) 724, 782
BsrI ACTGG 2 cut(s) 158, 1640
BssAI RCCGGY 1 cut(s) 1453
BssECI CCNNGG 4 cut(s) 918, 1020, 1104, 1209
BssMI GATC 6 cut(s) 202, 256, 535, 602, 1266, 1704
BssNI GRCGYC 1 cut(s) 192
BssSI CACGAG 1 cut(s) 135
BssT1I CCWWGG 2 cut(s) 1020, 1209
Bst2BI CACGAG 1 cut(s) 135
Bst2UI CCWGG 3 cut(s) 509, 1106, 1843
Bst4CI ACNGT 6 cut(s) 115, 403, 418, 716, 1264, 1687
Bst6I CTCTTC 3 cut(s) 909, 1226, 1617
BstACI GRCGYC 1 cut(s) 192
BstAUI TGTACA 2 cut(s) 724, 782
BstC8I GCNNGC 8 cut(s) 24, 382, 392, 1013, 1404, 1729, 1853, 1857
BstDEI CTNAG 6 cut(s) 50, 980, 1119, 1385, 1502, 1721
BstDSI CCRYGG 1 cut(s) 918
BstF5I GGATG 3 cut(s) 616, 678, 1512
BstH2I RGCGCY 1 cut(s) 1067
BstHHI GCGC 2 cut(s) 1066, 1848
BstKTI GATC 6 cut(s) 205, 259, 538, 605, 1269, 1707
BstMAI GTCTC 2 cut(s) 253, 623
BstMBI GATC 6 cut(s) 202, 256, 535, 602, 1266, 1704
BstMWI GCNNNNNNNGC 4 cut(s) 32, 1450, 1724, 1852
BstNI CCWGG 3 cut(s) 509, 1106, 1843
BstNSI RCATGY 3 cut(s) 16, 384, 1015
BstPAI GACNNNNGTC 1 cut(s) 245
BstSCI CCNGG 3 cut(s) 507, 1104, 1841
BstSLI GKGCMC 1 cut(s) 851
BstV1I GCAGC 6 cut(s) 371, 374, 1792, 1832, 1850, 1860
BstV2I GAAGAC 5 cut(s) 187, 1205, 1265, 1358, 1476
BsuRI GGCC 2 cut(s) 26, 296
BtgI CCRYGG 1 cut(s) 918
BtgZI GCGATG 1 cut(s) 1516
BtrI CACGTC 1 cut(s) 243
BtsCI GGATG 3 cut(s) 616, 678, 1512
BtsI GCAGTG 1 cut(s) 1811
BtsIMutI CAGTG 2 cut(s) 151, 1811
Cac8I GCNNGC 8 cut(s) 24, 382, 392, 1013, 1404, 1729, 1853, 1857
CfoI GCGC 2 cut(s) 1066, 1848
Cfr10I RCCGGY 1 cut(s) 1453
Cfr13I GGNCC 2 cut(s) 24, 107
CseI GACGC 3 cut(s) 181, 235, 1352
Csp6I GTAC 4 cut(s) 69, 712, 725, 783
CviAII CATG 6 cut(s) 13, 224, 381, 526, 1012, 1060
CviQI GTAC 4 cut(s) 69, 712, 725, 783
DdeI CTNAG 6 cut(s) 50, 980, 1119, 1385, 1502, 1721
DpnI GATC 6 cut(s) 204, 258, 537, 604, 1268, 1706
DpnII GATC 6 cut(s) 202, 256, 535, 602, 1266, 1704
DriI GACNNNNNGTC 1 cut(s) 509
EaeI YGGCCR 1 cut(s) 294
Eam1104I CTCTTC 3 cut(s) 909, 1226, 1617
Eam1105I GACNNNNNGTC 1 cut(s) 509
EarI CTCTTC 3 cut(s) 909, 1226, 1617
Ecl136II GAGCTC 1 cut(s) 1798
Eco130I CCWWGG 2 cut(s) 1020, 1209
Eco24I GRGCYC 2 cut(s) 970, 1800
Eco32I GATATC 2 cut(s) 826, 1047
Eco47I GGWCC 1 cut(s) 107
Eco53kI GAGCTC 1 cut(s) 1798
Eco57I CTGAAG 2 cut(s) 1469, 1809
Eco88I CYCGRG 1 cut(s) 1799
EcoICRI GAGCTC 1 cut(s) 1798
EcoRII CCWGG 3 cut(s) 507, 1104, 1841
EcoRV GATATC 2 cut(s) 826, 1047
EcoT14I CCWWGG 2 cut(s) 1020, 1209
EcoT22I ATGCAT 1 cut(s) 1017
EcoT38I GRGCYC 2 cut(s) 970, 1800
ErhI CCWWGG 2 cut(s) 1020, 1209
Esp3I CGTCTC 1 cut(s) 253
FaeI CATG 6 cut(s) 16, 227, 384, 529, 1015, 1063
FaqI GGGAC 6 cut(s) 120, 516, 1087, 1635, 1678, 1898
FatI CATG 6 cut(s) 12, 223, 380, 525, 1011, 1059
FauI CCCGC 1 cut(s) 15
FbaI TGATCA 1 cut(s) 1266
Fnu4HI GCNGC 6 cut(s) 385, 388, 1781, 1821, 1839, 1849
FokI GGATG 3 cut(s) 603, 665, 1519
FriOI GRGCYC 2 cut(s) 970, 1800
Fsp4HI GCNGC 6 cut(s) 385, 388, 1781, 1821, 1839, 1849
FspBI CTAG 3 cut(s) 1680, 1728, 1866
GlaI GCGC 2 cut(s) 1065, 1847
GluI GCNGC 6 cut(s) 385, 388, 1781, 1821, 1839, 1849
HaeII RGCGCY 1 cut(s) 1067
HaeIII GGCC 2 cut(s) 26, 296
HapII CCGG 2 cut(s) 1157, 1454
HgaI GACGC 3 cut(s) 181, 235, 1352
HhaI GCGC 2 cut(s) 1066, 1848
Hin1I GRCGYC 1 cut(s) 192
Hin1II CATG 6 cut(s) 16, 227, 384, 529, 1015, 1063
Hin6I GCGC 2 cut(s) 1064, 1846
HinP1I GCGC 2 cut(s) 1064, 1846
HincII GTYRAC 1 cut(s) 414
HindII GTYRAC 1 cut(s) 414
HinfI GANTC 6 cut(s) 83, 342, 504, 945, 1100, 1214
HpaII CCGG 2 cut(s) 1157, 1454
HphI GGTGA 3 cut(s) 250, 1276, 1619
Hpy166II GTNNAC 1 cut(s) 414
Hpy188I TCNGA 6 cut(s) 10, 88, 261, 1219, 1449, 1663
Hpy188III TCNNGA 3 cut(s) 271, 497, 1003
Hpy8I GTNNAC 1 cut(s) 414
HpyAV CCTTC 3 cut(s) 497, 1243, 1703
HpyCH4III ACNGT 6 cut(s) 115, 403, 418, 716, 1264, 1687
HpyCH4IV ACGT 4 cut(s) 242, 355, 578, 873
HpyF10VI GCNNNNNNNGC 4 cut(s) 32, 1450, 1724, 1852
HpyF3I CTNAG 6 cut(s) 50, 980, 1119, 1385, 1502, 1721
HpySE526I ACGT 4 cut(s) 242, 355, 578, 873
Hsp92I GRCGYC 1 cut(s) 192
Hsp92II CATG 6 cut(s) 16, 227, 384, 529, 1015, 1063
HspAI GCGC 2 cut(s) 1064, 1846
KpnI GGTACC 1 cut(s) 715
Ksp22I TGATCA 1 cut(s) 1266
Kzo9I GATC 6 cut(s) 202, 256, 535, 602, 1266, 1704
LguI GCTCTTC 2 cut(s) 909, 1617
LmnI GCTCC 1 cut(s) 701
Lsp1109I GCAGC 6 cut(s) 371, 374, 1792, 1832, 1850, 1860
LweI GCATC 7 cut(s) 22, 625, 1365, 1389, 1453, 1500, 1539
MaeI CTAG 3 cut(s) 1680, 1728, 1866
MaeII ACGT 4 cut(s) 242, 355, 578, 873
MaeIII GTNAC 1 cut(s) 238
MalI GATC 6 cut(s) 204, 258, 537, 604, 1268, 1706
MboI GATC 6 cut(s) 202, 256, 535, 602, 1266, 1704
MfeI CAATTG 3 cut(s) 811, 1038, 1542
MhlI GDGCHC 3 cut(s) 851, 970, 1800
MlsI TGGCCA 1 cut(s) 296
MluNI TGGCCA 1 cut(s) 296
MlyI GAGTC 3 cut(s) 498, 1109, 1208
MmeI TCCRAC 2 cut(s) 642, 725
Mox20I TGGCCA 1 cut(s) 296
Mph1103I ATGCAT 1 cut(s) 1017
MroXI GAANNNNTTC 1 cut(s) 164
MscI TGGCCA 1 cut(s) 296
MslI CAYNNNNRTG 2 cut(s) 1645, 1875
Msp20I TGGCCA 1 cut(s) 296
MspA1I CMGCKG 1 cut(s) 1851
MspI CCGG 2 cut(s) 1157, 1454
MspR9I CCNGG 3 cut(s) 509, 1106, 1843
MunI CAATTG 3 cut(s) 811, 1038, 1542
Mva1269I GAATGC 1 cut(s) 1640
MvaI CCWGG 3 cut(s) 509, 1106, 1843
MwoI GCNNNNNNNGC 4 cut(s) 32, 1450, 1724, 1852
NdeII GATC 6 cut(s) 202, 256, 535, 602, 1266, 1704
NheI GCTAGC 1 cut(s) 1727
NlaIII CATG 6 cut(s) 16, 227, 384, 529, 1015, 1063
NlaIV GGNNCC 3 cut(s) 108, 713, 1579
NmuCI GTSAC 1 cut(s) 238
NsiI ATGCAT 1 cut(s) 1017
NspI RCATGY 3 cut(s) 16, 384, 1015
PaeI GCATGC 2 cut(s) 384, 1015
PaeR7I CTCGAG 1 cut(s) 1799
PciI ACATGT 1 cut(s) 12
PciSI GCTCTTC 2 cut(s) 909, 1617
PctI GAATGC 1 cut(s) 1640
PdmI GAANNNNTTC 1 cut(s) 164
PfeI GAWTC 3 cut(s) 83, 342, 945
PkrI GCNGC 6 cut(s) 386, 389, 1782, 1822, 1840, 1850
PleI GAGTC 3 cut(s) 498, 1108, 1208
PpsI GAGTC 3 cut(s) 498, 1108, 1208
PscI ACATGT 1 cut(s) 12
PshAI GACNNNNGTC 1 cut(s) 245
PshBI ATTAAT 1 cut(s) 41
Psp124BI GAGCTC 1 cut(s) 1800
Psp1406I AACGTT 1 cut(s) 873
Psp6I CCWGG 3 cut(s) 507, 1104, 1841
PspGI CCWGG 3 cut(s) 507, 1104, 1841
PspN4I GGNNCC 3 cut(s) 108, 713, 1579
PspPI GGNCC 2 cut(s) 24, 107
PspXI VCTCGAGB 1 cut(s) 1799
PvuII CAGCTG 1 cut(s) 1851
RsaI GTAC 4 cut(s) 70, 713, 726, 784
RsaNI GTAC 4 cut(s) 69, 712, 725, 783
RseI CAYNNNNRTG 2 cut(s) 1645, 1875
SacI GAGCTC 1 cut(s) 1800
SapI GCTCTTC 2 cut(s) 909, 1617
SatI GCNGC 6 cut(s) 385, 388, 1781, 1821, 1839, 1849
Sau3AI GATC 6 cut(s) 202, 256, 535, 602, 1266, 1704
Sau96I GGNCC 2 cut(s) 24, 107
ScaI AGTACT 1 cut(s) 70
SchI GAGTC 3 cut(s) 498, 1109, 1208
ScrFI CCNGG 3 cut(s) 509, 1106, 1843
SduI GDGCHC 3 cut(s) 851, 970, 1800
SfaNI GCATC 7 cut(s) 22, 625, 1365, 1389, 1453, 1500, 1539
Sfr274I CTCGAG 1 cut(s) 1799
SinI GGWCC 1 cut(s) 107
SlaI CTCGAG 1 cut(s) 1799
SmiMI CAYNNNNRTG 2 cut(s) 1645, 1875
SmlI CTYRAG 2 cut(s) 1582, 1799
SmoI CTYRAG 2 cut(s) 1582, 1799
SphI GCATGC 2 cut(s) 384, 1015
SsiI CCGC 3 cut(s) 22, 266, 938
SspMI CTAG 3 cut(s) 1680, 1728, 1866
SstI GAGCTC 1 cut(s) 1800
StyD4I CCNGG 3 cut(s) 507, 1104, 1841
StyI CCWWGG 2 cut(s) 1020, 1209
TaaI ACNGT 6 cut(s) 115, 403, 418, 716, 1264, 1687
TaiI ACGT 4 cut(s) 245, 358, 581, 876
TaqI TCGA 4 cut(s) 318, 1467, 1707, 1800
TatI WGTACW 3 cut(s) 68, 724, 782
TfiI GAWTC 3 cut(s) 83, 342, 945
TscAI CASTG 2 cut(s) 158, 1811
TseFI GTSAC 1 cut(s) 238
TseI GCWGC 6 cut(s) 384, 387, 1780, 1820, 1838, 1848
Tsp45I GTSAC 1 cut(s) 238
TspDTI ATGAA 6 cut(s) 160, 187, 667, 915, 1166, 1507
TspGWI ACGGA 1 cut(s) 1632
TspRI CASTG 2 cut(s) 158, 1811
VpaK11BI GGWCC 1 cut(s) 107
VspI ATTAAT 1 cut(s) 41
XapI RAATTY 5 cut(s) 55, 123, 371, 1408, 1813
XceI RCATGY 3 cut(s) 16, 384, 1015
XhoI CTCGAG 1 cut(s) 1799
XmnI GAANNNNTTC 1 cut(s) 164
XspI CTAG 3 cut(s) 1680, 1728, 1866
ZrmI AGTACT 1 cut(s) 70
Zsp2I ATGCAT 1 cut(s) 1017
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.