RchiOBHm_Chr1g0341001

ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0000404
Physical Location & Seq
Forward (+)
32645006 .. 32647765
2760 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ56774

Sequence Viewer

Length: 1494 bp
ATGGAGATTAGAGAAGACCACCATGAAGACGATACAACAAAAGCACTCTATGAGGCAGCAGTTGCAGACTCTGTATCATCTTTTAAAACATTGATCCAGAAAGACCCTCTCATCCTTGACGAAGTTTCACTCACTCACTTCAGTGAAACTCCCCTCCACATCTCAGCTCTGCTCGGCAACATTGATTTCACCAAGGCTATTCTTACCCACAACTGGAGACTTGCCACCGTGAGGGACTCCTTGAGACGCCTGCCGCTTCTCTTGGCAGCTGCCGAGGGCCAAAAGGAGATTGTTCAAGCTCTTCTGAAAGCCTACCCGGCCGCTTGCTTGTTTCCTGATCAGTATGGAAGAATCCCTCTTCACTATGCCGCTATGAGAGGACACGCTGAGGTCTTAGTTGAGTTGATGCACACAATGCCCAAATCAGTCATGTTAAGGGTTCTTGATAGAGGAGACACGGTTTTCCACTTATGTGTTGCTTATAACCAATTAGAATGCTTGAAGCTATTGGTGGAAGAGGTAGGAGACAATAGAGACCTCCTCAATGCTAGAGCTGGATGCGATGGTGGTATGACCATCCTTGAATTAGCTGTGATGCTAAGGCAAATTGAGACCATAAAATACTTGCTTTCGCTACCTGCTGTACAAGCAGAAGCAAATGTTGTACATGGGAAGGTTTTAAACATGCTAGAAAATAGTCCAAGAGAGTCCGTAAGTTTGGAAATTCAACGAGTTTTGATGGATGCTGGTATCATGAGAAATGGAAAGAATGAAAATGAGAAACAACTACCATTACCAAACAACAAATCAAAGAAAGATGGAAAAAAGGGACGGAAAGGTTCGAAAAAGGTGAATGAGAAACGCAGTGAGAGTGGGAATTGGGTGGAAGAGAAACGCGGCATGCTGATGGTTGTAGCTACCATGATCTCAACAATGACATTCCAAGCTGCAATTAACCCACCAGGTGGGTTTTGGCAAGAAATGAACACCAATACGGTTTTTGATGGAGTTCCTTATTGCAGTATGAGAGACCCTTGTCTACCCGGAACTGCAGTATCAAGGTACATGCATCCAGAATACTTCAACTGCTTCCAGATTTTCAATACCATCAGCTTCCTCTGTTCTTTGTGCATCACTCTTTTGCTTATAAGTGGATTTCGTCTCCATAAACGAGTACTTGTCTGGCTCTTGTCAATAGTGATGTGTCTCACTCTCACATTCTTGGCACTGGCCTTCAGGGCAGGTTCCTATATGATAAGACCAGAAGGTATTCAATATGGATATCGCGATCGTATACGTTTTCTGGCTTATGGCTCATGGTTTTGGGTTCCATTGCTTCTACTGGTAGCTTTATATCACACTATTCGACTTCTGGTTTGGCTCGTAAGGAAGTTGTGGCGCCTAATCTACCACAAAATCAAGAAGACGAGCAGCAACGATGGAAATCAACATCAGCCTCCCTCAAACTCTCATGAGAACAATTCGTACGTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Ank_2 Ank_3 Ank_4 PGG

Protein Analysis

497

Amino Acids

56.45

Weight (kDa)

8.85

Isoelectric Point (pI)

37.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 17 - 103 4.8e-08 Ankyrin repeats (3 copies)
Ank_2 PF12796 80 - 136 2.7e-07 Ankyrin repeats (3 copies)
Ank_2 PF12796 86 - 173 3.4e-12 Ankyrin repeats (3 copies)
Ank_2 PF12796 120 - 212 2.9e-11 Ankyrin repeats (3 copies)
PGG PF13962 293 - 418 1.2e-23 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000404)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G13950 AT4G13266
fragaria_vesca FvH4_7g06240 FvH4_7g06250 FvH4_7g06270
malus_domestica MD12G1213300.v1.1 MD12G1213900.v1.1 MD12G1214100.v1.1 MD12G1214700.v1.1 MD12G1214800.v1.1
prunus_persica Prupe.2G107700_v2.0.a1 Prupe.3G142200_v2.0.a1 Prupe.3G154100_v2.0.a1 Prupe.3G154300_v2.0.a1 Prupe.3G154900_v2.0.a1 Prupe.3G155100_v2.0.a1
pyrus_communis pycom12g20010 pycom12g20080 pycom12g20090 pycom12g20100
rosa_chinensis RchiOBHm_Chr1g0341001 RchiOBHm_Chr1g0341021 RchiOBHm_Chr1g0341891 RchiOBHm_Chr1g0342341 RchiOBHm_Chr3g0490431
rosa_laevigata RLG00000022889 RLG00000029016 RLG00000029039 RLG00000029059 RLG00000029061 RLG00000029065 RLG00000029115 RLG00000029155 RLG00000033311 RLG00000033312
rosa_multiflora Rmu_sc0000404.1_g000006 Rmu_sc0001836.1_g000015 Rmu_sc0001836.1_g000050 Rmu_sc0002200.1_g000003 Rmu_sc0003862.1_g000020 Rmu_sc0005193.1_g000001 Rmu_sc0005193.1_g000002 Rmu_sc0008453.1_g000008 Rmu_sc0008453.1_g000009 Rmu_sc0008453.1_g000010 Rmu_sc0008862.1_g000001 Rmu_sc0011195.1_g000003 Rmu_sc0014077.1_g000001
rosa_roxburghii Rroxscaffold_4G00311670 Rroxscaffold_4G00311730 Rroxscaffold_4G00311750 Rroxscaffold_4G00312290 Rroxscaffold_6G00393430
rosa_rugosa Rorug01G0153800.1 Rorug01G0153900.1 Rorug01G0160100.1 Rorug03G0243800
rosa_samantha Rh1AG166400 Rh1AG168200 Rh1AG174100 Rh1AG174700 Rh1AG179000 Rh1BG132600 Rh1BG136500 Rh1BG142200 Rh1BG142800 Rh1BG143200 Rh1BG146200 Rh1BG147000 Rh1BG147100 Rh1CG154800 Rh1CG161900 Rh1CG162700 Rh1CG166000 Rh1DG167500 Rh1DG169900 Rh1DG174000 Rh1DG174400 Rh1DG174700 Rh1DG174800 Rh1DG178200 Rh1DG179000 Rh1DG179100 Rh3AG292800 Rh3BG329600 Rh3CG326900 Rh3DG326200 Rh5BG218300 Rh7CG326800 Rh7DG307100
rosa_wichuraiana Rw0G006190 Rw0G007830 Rw0G009970 Rw0G009980 Rw1G013880 Rw1G014000 Rw1G014500 Rw1G014560 Rw1G014920 Rw3G025950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 483, 1148
Acc36I ACCTGC 2 cut(s) 646, 1232
AccB1I GGYRCC 1 cut(s) 1398
AccB7I CCANNNNNTGG 1 cut(s) 965
AccI GTMKAC 2 cut(s) 1039, 1294
AccII CGCG 2 cut(s) 897, 1287
AciI CCGC 4 cut(s) 254, 321, 369, 897
AclWI GGATC 1 cut(s) 88
AcoI YGGCCR 1 cut(s) 318
AcsI RAATTY 1 cut(s) 723
AcuI CTGAAG 2 cut(s) 124, 1219
AcyI GRCGYC 2 cut(s) 247, 1399
AdeI CACNNNGTG 1 cut(s) 965
AfaI GTAC 5 cut(s) 645, 666, 1064, 1176, 1487
AfiI CCNNNNNNNGG 3 cut(s) 213, 231, 965
AgsI TTSAA 7 cut(s) 296, 502, 584, 728, 1084, 1102, 1274
AjnI CCWGG 1 cut(s) 961
AleI CACNNNNGTG 2 cut(s) 141, 471
Alw26I GTCTC 9 cut(s) 211, 238, 447, 519, 528, 605, 1023, 1166, 1211
AlwI GGATC 1 cut(s) 88
AlwNI CAGNNNCTG 1 cut(s) 71
AoxI GGCC 3 cut(s) 277, 318, 1230
ApeKI GCWGC 5 cut(s) 56, 266, 269, 947, 1431
ApoI RAATTY 1 cut(s) 723
ArsI GACNNNNNNTTYG 2 cut(s) 1359, 1391
Asp700I GAANNNNTTC 1 cut(s) 1269
AspLEI GCGC 1 cut(s) 1401
AspS9I GGNCC 1 cut(s) 277
AsuC2I CCSGG 2 cut(s) 317, 1044
AsuHPI GGTGA 2 cut(s) 181, 862
AsuII TTCGAA 1 cut(s) 842
BaeI ACNNNNGTAYC 2 cut(s) 1038, 1071
BanI GGYRCC 1 cut(s) 1398
BbsI GAAGAC 3 cut(s) 21, 33, 1430
BbvCI CCTCAGC 1 cut(s) 387
BbvI GCAGC 5 cut(s) 68, 256, 278, 934, 1443
BccI CCATC 8 cut(s) 557, 584, 733, 812, 901, 998, 1115, 1433
BciT130I CCWGG 1 cut(s) 963
BclI TGATCA 1 cut(s) 337
BcnI CCSGG 2 cut(s) 317, 1044
BcoDI GTCTC 9 cut(s) 211, 238, 447, 519, 528, 605, 1023, 1166, 1211
BfaI CTAG 2 cut(s) 549, 689
BfmI CTRYAG 1 cut(s) 1050
BfoI RGCGCY 1 cut(s) 1402
BfuAI ACCTGC 2 cut(s) 646, 1232
BglI GCCNNNNNGGC 2 cut(s) 317, 1238
BisI GCNGC 9 cut(s) 57, 254, 267, 270, 321, 369, 898, 948, 1432
BlsI GCNGC 9 cut(s) 58, 255, 268, 271, 322, 370, 899, 949, 1433
BmcAI AGTACT 1 cut(s) 1176
Bme1390I CCNGG 3 cut(s) 317, 963, 1044
BmgT120I GGNCC 1 cut(s) 277
BmiI GGNNCC 3 cut(s) 1246, 1329, 1400
BmrFI CCNGG 3 cut(s) 317, 963, 1044
BmsI GCATC 6 cut(s) 396, 548, 585, 733, 1078, 1140
BoxI GACNNNNGTC 1 cut(s) 1035
BpiI GAAGAC 3 cut(s) 21, 33, 1430
BplI GAGNNNNNCTC 2 cut(s) 525, 557
BpmI CTGGAG 1 cut(s) 235
Bpu10I CCTNAGC 2 cut(s) 387, 599
Bpu14I TTCGAA 1 cut(s) 842
BpuEI CTTGAG 1 cut(s) 262
BpuMI CCSGG 2 cut(s) 317, 1044
BsaBI GATNNNNATC 1 cut(s) 1443
BsaHI GRCGYC 2 cut(s) 247, 1399
BsaI GGTCTC 3 cut(s) 528, 605, 1023
BsaJI CCNNGG 2 cut(s) 192, 273
BsaXI ACNNNNNCTCC 2 cut(s) 444, 474
Bsc4I CCNNNNNNNGG 3 cut(s) 213, 231, 965
Bse1I ACTGG 3 cut(s) 218, 1233, 1347
Bse3DI GCAATG 1 cut(s) 1331
Bse8I GATNNNNATC 1 cut(s) 1443
BseBI CCWGG 1 cut(s) 963
BseDI CCNNGG 2 cut(s) 192, 273
BseGI GGATG 5 cut(s) 111, 563, 576, 748, 1069
BseJI GATNNNNATC 1 cut(s) 1443
BseLI CCNNNNNNNGG 3 cut(s) 213, 231, 965
BseMI GCAATG 1 cut(s) 1331
BseMII CTCAG 2 cut(s) 177, 378
BseNI ACTGG 3 cut(s) 218, 1233, 1347
BseRI GAGGAG 2 cut(s) 465, 530
BseX3I CGGCCG 1 cut(s) 318
BseXI GCAGC 5 cut(s) 68, 256, 278, 934, 1443
Bsh1236I CGCG 2 cut(s) 897, 1287
Bsh1285I CGRYCG 2 cut(s) 321, 1291
BshFI GGCC 3 cut(s) 279, 320, 1232
BshNI GGYRCC 1 cut(s) 1398
BsiEI CGRYCG 2 cut(s) 321, 1291
BsiSI CCGG 2 cut(s) 317, 1044
BsiWI CGTACG 1 cut(s) 1485
BslFI GGGAC 2 cut(s) 248, 843
BslI CCNNNNNNNGG 3 cut(s) 213, 231, 965
BsmAI GTCTC 9 cut(s) 211, 238, 447, 519, 528, 605, 1023, 1166, 1211
BsmBI CGTCTC 2 cut(s) 238, 1166
BsmFI GGGAC 2 cut(s) 248, 843
BsmI GAATGC 1 cut(s) 500
BsnI GGCC 3 cut(s) 279, 320, 1232
Bso31I GGTCTC 3 cut(s) 528, 605, 1023
Bsp119I TTCGAA 1 cut(s) 842
Bsp1407I TGTACA 2 cut(s) 643, 664
Bsp143I GATC 4 cut(s) 93, 337, 924, 1288
Bsp68I TCGCGA 1 cut(s) 1287
BspACI CCGC 4 cut(s) 254, 321, 369, 897
BspANI GGCC 3 cut(s) 279, 320, 1232
BspCNI CTCAG 2 cut(s) 176, 379
BspFNI CGCG 2 cut(s) 897, 1287
BspHI TCATGA 2 cut(s) 753, 1471
BspLI GGNNCC 3 cut(s) 1246, 1329, 1400
BspMAI CTGCAG 1 cut(s) 1054
BspMI ACCTGC 2 cut(s) 646, 1232
BspPI GGATC 1 cut(s) 88
BspQI GCTCTTC 1 cut(s) 306
BspT104I TTCGAA 1 cut(s) 842
BspT107I GGYRCC 1 cut(s) 1398
BspTNI GGTCTC 3 cut(s) 528, 605, 1023
BsrDI GCAATG 1 cut(s) 1331
BsrGI TGTACA 2 cut(s) 643, 664
BsrI ACTGG 3 cut(s) 218, 1233, 1347
BssECI CCNNGG 2 cut(s) 192, 273
BssMI GATC 4 cut(s) 93, 337, 924, 1288
BssNAI GTATAC 1 cut(s) 1295
BssNI GRCGYC 2 cut(s) 247, 1399
BssT1I CCWWGG 1 cut(s) 192
Bst1107I GTATAC 1 cut(s) 1295
Bst2UI CCWGG 1 cut(s) 963
Bst4CI ACNGT 3 cut(s) 229, 460, 997
Bst6I CTCTTC 4 cut(s) 306, 363, 510, 882
BstACI GRCGYC 2 cut(s) 247, 1399
BstAPI GCANNNNNTGC 2 cut(s) 62, 415
BstAUI TGTACA 2 cut(s) 643, 664
BstBI TTCGAA 1 cut(s) 842
BstC8I GCNNGC 3 cut(s) 251, 325, 902
BstDEI CTNAG 4 cut(s) 163, 387, 394, 599
BstF5I GGATG 5 cut(s) 111, 563, 576, 748, 1069
BstFNI CGCG 2 cut(s) 897, 1287
BstH2I RGCGCY 1 cut(s) 1402
BstHHI GCGC 1 cut(s) 1401
BstKTI GATC 4 cut(s) 96, 340, 927, 1291
BstMAI GTCTC 9 cut(s) 211, 238, 447, 519, 528, 605, 1023, 1166, 1211
BstMBI GATC 4 cut(s) 93, 337, 924, 1288
BstMCI CGRYCG 2 cut(s) 321, 1291
BstMWI GCNNNNNNNGC 5 cut(s) 62, 317, 415, 647, 1238
BstNI CCWGG 1 cut(s) 963
BstNSI RCATGY 3 cut(s) 688, 904, 1069
BstPAI GACNNNNGTC 1 cut(s) 1035
BstSCI CCNGG 3 cut(s) 315, 961, 1042
BstSFI CTRYAG 1 cut(s) 1050
BstUI CGCG 2 cut(s) 897, 1287
BstV1I GCAGC 5 cut(s) 68, 256, 278, 934, 1443
BstV2I GAAGAC 3 cut(s) 21, 33, 1430
BstZ17I GTATAC 1 cut(s) 1295
BstZI CGGCCG 1 cut(s) 318
BsuRI GGCC 3 cut(s) 279, 320, 1232
BtgZI GCGATG 1 cut(s) 576
BtsCI GGATG 5 cut(s) 111, 563, 576, 748, 1069
BtsI GCAGTG 1 cut(s) 871
BtsIMutI CAGTG 3 cut(s) 148, 871, 1226
BtuMI TCGCGA 1 cut(s) 1287
BveI ACCTGC 2 cut(s) 646, 1232
Cac8I GCNNGC 3 cut(s) 251, 325, 902
CaiI CAGNNNCTG 1 cut(s) 71
CciI TCATGA 2 cut(s) 753, 1471
CfoI GCGC 1 cut(s) 1401
Cfr13I GGNCC 1 cut(s) 277
CseI GACGC 1 cut(s) 255
CsiI ACCWGGT 1 cut(s) 961
Csp6I GTAC 5 cut(s) 644, 665, 1063, 1175, 1486
CviQI GTAC 5 cut(s) 644, 665, 1063, 1175, 1486
DdeI CTNAG 4 cut(s) 163, 387, 394, 599
DinI GGCGCC 1 cut(s) 1400
DpnI GATC 4 cut(s) 95, 339, 926, 1290
DpnII GATC 4 cut(s) 93, 337, 924, 1288
DraI TTTAAA 2 cut(s) 85, 681
DraIII CACNNNGTG 1 cut(s) 965
EaeI YGGCCR 1 cut(s) 318
EagI CGGCCG 1 cut(s) 318
Eam1104I CTCTTC 4 cut(s) 306, 363, 510, 882
EarI CTCTTC 4 cut(s) 306, 363, 510, 882
EclXI CGGCCG 1 cut(s) 318
Eco130I CCWWGG 1 cut(s) 192
Eco31I GGTCTC 3 cut(s) 528, 605, 1023
Eco32I GATATC 1 cut(s) 1283
Eco52I CGGCCG 1 cut(s) 318
Eco57I CTGAAG 2 cut(s) 124, 1219
EcoRII CCWGG 1 cut(s) 961
EcoRV GATATC 1 cut(s) 1283
EcoT14I CCWWGG 1 cut(s) 192
EcoT22I ATGCAT 1 cut(s) 1071
EgeI GGCGCC 1 cut(s) 1400
EheI GGCGCC 1 cut(s) 1400
ErhI CCWWGG 1 cut(s) 192
Esp3I CGTCTC 2 cut(s) 238, 1166
FaqI GGGAC 2 cut(s) 248, 843
FbaI TGATCA 1 cut(s) 337
FblI GTMKAC 2 cut(s) 1039, 1294
Fnu4HI GCNGC 9 cut(s) 57, 254, 267, 270, 321, 369, 898, 948, 1432
FokI GGATG 5 cut(s) 98, 563, 570, 755, 1056
Fsp4HI GCNGC 9 cut(s) 57, 254, 267, 270, 321, 369, 898, 948, 1432
FspBI CTAG 2 cut(s) 549, 689
GlaI GCGC 1 cut(s) 1400
GluI GCNGC 9 cut(s) 57, 254, 267, 270, 321, 369, 898, 948, 1432
GsuI CTGGAG 1 cut(s) 235
HaeII RGCGCY 1 cut(s) 1402
HaeIII GGCC 3 cut(s) 279, 320, 1232
HapII CCGG 2 cut(s) 317, 1044
HgaI GACGC 1 cut(s) 255
HhaI GCGC 1 cut(s) 1401
Hin1I GRCGYC 2 cut(s) 247, 1399
Hin6I GCGC 1 cut(s) 1399
HinP1I GCGC 1 cut(s) 1399
HinfI GANTC 4 cut(s) 68, 236, 351, 707
HpaII CCGG 2 cut(s) 317, 1044
HphI GGTGA 2 cut(s) 181, 862
Hpy166II GTNNAC 2 cut(s) 1040, 1295
Hpy188I TCNGA 1 cut(s) 306
Hpy188III TCNNGA 9 cut(s) 97, 335, 443, 754, 1073, 1093, 1286, 1420, 1472
Hpy8I GTNNAC 2 cut(s) 1040, 1295
HpyAV CCTTC 3 cut(s) 667, 1243, 1259
HpyCH4III ACNGT 3 cut(s) 229, 460, 997
HpyCH4IV ACGT 2 cut(s) 1297, 1488
HpyCH4V TGCA 7 cut(s) 65, 409, 950, 1020, 1052, 1069, 1131
HpyF10VI GCNNNNNNNGC 5 cut(s) 62, 317, 415, 647, 1238
HpyF3I CTNAG 4 cut(s) 163, 387, 394, 599
HpySE526I ACGT 2 cut(s) 1297, 1488
Hsp92I GRCGYC 2 cut(s) 247, 1399
HspAI GCGC 1 cut(s) 1399
KasI GGCGCC 1 cut(s) 1398
Ksp22I TGATCA 1 cut(s) 337
Kzo9I GATC 4 cut(s) 93, 337, 924, 1288
LguI GCTCTTC 1 cut(s) 306
Lsp1109I GCAGC 5 cut(s) 68, 256, 278, 934, 1443
LweI GCATC 6 cut(s) 396, 548, 585, 733, 1078, 1140
MabI ACCWGGT 1 cut(s) 961
MaeI CTAG 2 cut(s) 549, 689
MaeII ACGT 2 cut(s) 1297, 1488
MalI GATC 4 cut(s) 95, 339, 926, 1290
MboI GATC 4 cut(s) 93, 337, 924, 1288
MboII GAAGA 8 cut(s) 26, 38, 293, 350, 360, 527, 899, 1435
MluCI AATT 7 cut(s) 488, 584, 606, 723, 877, 951, 1480
Mly113I GGCGCC 1 cut(s) 1399
MlyI GAGTC 3 cut(s) 62, 230, 716
Mph1103I ATGCAT 1 cut(s) 1071
MroXI GAANNNNTTC 1 cut(s) 1269
MseI TTAA 4 cut(s) 84, 434, 680, 954
MslI CAYNNNNRTG 3 cut(s) 141, 471, 905
MspA1I CMGCKG 1 cut(s) 269
MspI CCGG 2 cut(s) 317, 1044
MspR9I CCNGG 3 cut(s) 317, 963, 1044
Mva1269I GAATGC 1 cut(s) 500
MvaI CCWGG 1 cut(s) 963
MvnI CGCG 2 cut(s) 897, 1287
MwoI GCNNNNNNNGC 5 cut(s) 62, 317, 415, 647, 1238
NarI GGCGCC 1 cut(s) 1399
NciI CCSGG 2 cut(s) 317, 1044
NdeII GATC 4 cut(s) 93, 337, 924, 1288
NlaIV GGNNCC 3 cut(s) 1246, 1329, 1400
NmeAIII GCCGAG 2 cut(s) 153, 298
NruI TCGCGA 1 cut(s) 1287
NsiI ATGCAT 1 cut(s) 1071
NspI RCATGY 3 cut(s) 688, 904, 1069
NspV TTCGAA 1 cut(s) 842
OliI CACNNNNGTG 2 cut(s) 141, 471
PaeI GCATGC 1 cut(s) 904
PagI TCATGA 2 cut(s) 753, 1471
PciSI GCTCTTC 1 cut(s) 306
PctI GAATGC 1 cut(s) 500
PdmI GAANNNNTTC 1 cut(s) 1269
PfeI GAWTC 1 cut(s) 351
Pfl23II CGTACG 1 cut(s) 1485
PflMI CCANNNNNTGG 1 cut(s) 965
PkrI GCNGC 9 cut(s) 58, 255, 268, 271, 322, 370, 899, 949, 1433
Ple19I CGATCG 1 cut(s) 1291
PleI GAGTC 3 cut(s) 62, 230, 715
PluTI GGCGCC 1 cut(s) 1402
PpsI GAGTC 3 cut(s) 62, 230, 715
PshAI GACNNNNGTC 1 cut(s) 1035
PsiI TTATAA 2 cut(s) 483, 1148
Psp6I CCWGG 1 cut(s) 961
PspGI CCWGG 1 cut(s) 961
PspLI CGTACG 1 cut(s) 1485
PspN4I GGNNCC 3 cut(s) 1246, 1329, 1400
PspPI GGNCC 1 cut(s) 277
PsrI GAACNNNNNNTAC 1 cut(s) 1469
PstI CTGCAG 1 cut(s) 1054
PstNI CAGNNNCTG 1 cut(s) 71
PvuI CGATCG 1 cut(s) 1291
PvuII CAGCTG 1 cut(s) 269
RruI TCGCGA 1 cut(s) 1287
RsaI GTAC 5 cut(s) 645, 666, 1064, 1176, 1487
RsaNI GTAC 5 cut(s) 644, 665, 1063, 1175, 1486
RseI CAYNNNNRTG 3 cut(s) 141, 471, 905
SapI GCTCTTC 1 cut(s) 306
SaqAI TTAA 4 cut(s) 84, 434, 680, 954
SatI GCNGC 9 cut(s) 57, 254, 267, 270, 321, 369, 898, 948, 1432
Sau3AI GATC 4 cut(s) 93, 337, 924, 1288
Sau96I GGNCC 1 cut(s) 277
ScaI AGTACT 1 cut(s) 1176
SchI GAGTC 3 cut(s) 62, 230, 716
ScrFI CCNGG 3 cut(s) 317, 963, 1044
SexAI ACCWGGT 1 cut(s) 961
SfaNI GCATC 6 cut(s) 396, 548, 585, 733, 1078, 1140
SfcI CTRYAG 1 cut(s) 1050
SfoI GGCGCC 1 cut(s) 1400
SfuI TTCGAA 1 cut(s) 842
SmiMI CAYNNNNRTG 3 cut(s) 141, 471, 905
SmlI CTYRAG 1 cut(s) 241
SmoI CTYRAG 1 cut(s) 241
SphI GCATGC 1 cut(s) 904
Sse9I AATT 7 cut(s) 488, 584, 606, 723, 877, 951, 1480
SsiI CCGC 4 cut(s) 254, 321, 369, 897
SspDI GGCGCC 1 cut(s) 1398
SspMI CTAG 2 cut(s) 549, 689
StyD4I CCNGG 3 cut(s) 315, 961, 1042
StyI CCWWGG 1 cut(s) 192
TaaI ACNGT 3 cut(s) 229, 460, 997
TaiI ACGT 2 cut(s) 1300, 1491
TaqI TCGA 2 cut(s) 842, 1366
TasI AATT 7 cut(s) 488, 584, 606, 723, 877, 951, 1480
TatI WGTACW 3 cut(s) 643, 664, 1174
TauI GCSGC 4 cut(s) 256, 323, 371, 900
TfiI GAWTC 1 cut(s) 351
Tru1I TTAA 4 cut(s) 84, 434, 680, 954
Tru9I TTAA 4 cut(s) 84, 434, 680, 954
TscAI CASTG 3 cut(s) 148, 871, 1233
TseI GCWGC 5 cut(s) 56, 266, 269, 947, 1431
TspDTI ATGAA 3 cut(s) 39, 786, 998
TspGWI ACGGA 2 cut(s) 700, 847
TspRI CASTG 3 cut(s) 148, 871, 1233
Van91I CCANNNNNTGG 1 cut(s) 965
XapI RAATTY 1 cut(s) 723
XceI RCATGY 3 cut(s) 688, 904, 1069
XcmI CCANNNNNNNNNTGG 1 cut(s) 969
XmiI GTMKAC 2 cut(s) 1039, 1294
XmnI GAANNNNTTC 1 cut(s) 1269
XspI CTAG 2 cut(s) 549, 689
ZrmI AGTACT 1 cut(s) 1176
Zsp2I ATGCAT 1 cut(s) 1071
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.