Rroxscaffold_6G00393430

ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000006
OG0000404
Physical Location & Seq
Reverse (-)
13519234 .. 13521838
2605 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_6G00393430.1

Sequence Viewer

Length: 1548 bp
ATGGAAGACCTATTGATTAAACAGGATGATGAAAACAAAAGTGAGGGTCTGTTTTGGCGTAGCTTTGTGAAACCAAGCAACATCGATAAGAAACTCACGTCCAATAGAACAGTTGCAGGCTCCGTATCATCTTTGATAAGACTGATCCAGAAAGACCCTCTCATCCTCAACAAAGTTTCACTCACTCACTTCAGCGAAACTCCGCTTCACATCTCAGCTTTGCTCGGCCACCTTGATTTTACCAAAGCTCTTCTTATTCATAACTCGAGACTTGCCCGGGTGAGGGACTCCTTGAGACGCCCTCCGCTCCTCTTGGCATCTGCTGAGGGCCATAAGGAGACGGTCGAAGCTCTTCTGAAAGCCTACCCCGACGCTTGCTTGTTTCGGGATCAAGATGGTAGAGTTCCTCTTCACTACGCCGCAATGAGAGGACATGCTGAGGTTTTAGCTCAGCTGATGTGCGCAAAGCCCGAATCGGTCACATTAAGGGTTCTTGATAGAGGAGACACGGTTTTCCACTTGTGTGTTACATATAACCAATTAGAATGCTTGAAGCTATTGGTGGAGGAAGTAGGAGACAATAATAGAGACGTCCTCAGTGCTAGAGCTGGTTGTGATGGTGGTATAACCATTCTTGAGTTAGCTGTGATGCTAAGGCAAATTGAGACCCTAAGATACTTGCTTTCACTACCTGTTGTATGGGCAGAAGCAAATGTTGTGCATGGGAAGGTATTAAACATTGTAGAAAATATGCCAAAAGACTTCGTAAGCTTGGAAATTCAACGAGTTTTGATGGATTCTGGTATAATAAGGAATGGAAGGAATGAAAATGAGCAACAACCAGTAGTACCAAACAACAAATCAAAGAAAGAAGGGAAAAAGGGAAGGAAAAGTACAAAAAACGTAAATGAGAAACGCAGTAAGAGTGGGAATTGGGTGGAAGAGAAACGCGGCATGCTCATGGTTGTGGCTACCATGATCTCAACAATGACATTCCAAGCTGCAATTAACCCACCAGGTGGTTTTTGGCAAGAAATCAACACCAATACGGCTTTTGGTGGAGTATCTTATTGCAATGACACAAGCCCATGTTTCGTCGGAACTGCAGTGTCAAGCTACATTCATCCAGATTTATACATTAACTTCCAGACTTTCGATACTATCTGCTTCCTCTTCTCTTTGAGCATCACTCTTTTGCTTATAAGCGGATTTCCTCTCCATAAACGAGTGCTTGTGTGGCTCTTAACAGTAGTCATGTGTCTCACACTCACATTCTTGACATTGACCTTCAATGAAGGTATAAAGATGGTAATACCCAAACGTGTTAATAATGAAGATCTTAGCAGTTACGTGGTTATTGGTTCTGTAACATTGTTTTGGGTTCCAATGCTTGGACTGGTGGCTTTATACCACACTATTCGACTTCTCGTTTGGCTGGTCAAGAAGTTGTGGCGCCTAATCTACCCAAAAAATAAGATGACGAGCAACAGCAACGCAAATCTACTCCAGCCTCCCATAAACTCTCATGAGACCAGTTCGTATGTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Ank_2 Ank_3 Ank_4 PGG

Protein Analysis

515

Amino Acids

57.89

Weight (kDa)

9.05

Isoelectric Point (pI)

41.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 49 - 122 8.8e-08 Ankyrin repeats (3 copies)
Ank_2 PF12796 137 - 229 2.5e-10 Ankyrin repeats (3 copies)
PGG PF13962 311 - 434 3.9e-17 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000404)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G13950 AT4G13266
fragaria_vesca FvH4_7g06240 FvH4_7g06250 FvH4_7g06270
malus_domestica MD12G1213300.v1.1 MD12G1213900.v1.1 MD12G1214100.v1.1 MD12G1214700.v1.1 MD12G1214800.v1.1
prunus_persica Prupe.2G107700_v2.0.a1 Prupe.3G142200_v2.0.a1 Prupe.3G154100_v2.0.a1 Prupe.3G154300_v2.0.a1 Prupe.3G154900_v2.0.a1 Prupe.3G155100_v2.0.a1
pyrus_communis pycom12g20010 pycom12g20080 pycom12g20090 pycom12g20100
rosa_chinensis RchiOBHm_Chr1g0341001 RchiOBHm_Chr1g0341021 RchiOBHm_Chr1g0341891 RchiOBHm_Chr1g0342341 RchiOBHm_Chr3g0490431
rosa_laevigata RLG00000022889 RLG00000029016 RLG00000029039 RLG00000029059 RLG00000029061 RLG00000029065 RLG00000029115 RLG00000029155 RLG00000033311 RLG00000033312
rosa_multiflora Rmu_sc0000404.1_g000006 Rmu_sc0001836.1_g000015 Rmu_sc0001836.1_g000050 Rmu_sc0002200.1_g000003 Rmu_sc0003862.1_g000020 Rmu_sc0005193.1_g000001 Rmu_sc0005193.1_g000002 Rmu_sc0008453.1_g000008 Rmu_sc0008453.1_g000009 Rmu_sc0008453.1_g000010 Rmu_sc0008862.1_g000001 Rmu_sc0011195.1_g000003 Rmu_sc0014077.1_g000001
rosa_roxburghii Rroxscaffold_4G00311670 Rroxscaffold_4G00311730 Rroxscaffold_4G00311750 Rroxscaffold_4G00312290 Rroxscaffold_6G00393430
rosa_rugosa Rorug01G0153800.1 Rorug01G0153900.1 Rorug01G0160100.1 Rorug03G0243800
rosa_samantha Rh1AG166400 Rh1AG168200 Rh1AG174100 Rh1AG174700 Rh1AG179000 Rh1BG132600 Rh1BG136500 Rh1BG142200 Rh1BG142800 Rh1BG143200 Rh1BG146200 Rh1BG147000 Rh1BG147100 Rh1CG154800 Rh1CG161900 Rh1CG162700 Rh1CG166000 Rh1DG167500 Rh1DG169900 Rh1DG174000 Rh1DG174400 Rh1DG174700 Rh1DG174800 Rh1DG178200 Rh1DG179000 Rh1DG179100 Rh3AG292800 Rh3BG329600 Rh3CG326900 Rh3DG326200 Rh5BG218300 Rh7CG326800 Rh7DG307100
rosa_wichuraiana Rw0G006190 Rw0G007830 Rw0G009970 Rw0G009980 Rw1G013880 Rw1G014000 Rw1G014500 Rw1G014560 Rw1G014920 Rw3G025950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1202
AatII GACGTC 1 cut(s) 594
Acc16I TGCGCA 1 cut(s) 463
AccB1I GGYRCC 1 cut(s) 1452
AccB7I CCANNNNNTGG 2 cut(s) 1019, 1391
AccBSI CCGCTC 1 cut(s) 307
AccII CGCG 1 cut(s) 951
AciI CCGC 5 cut(s) 203, 305, 420, 951, 1206
AclWI GGATC 2 cut(s) 139, 396
AcoI YGGCCR 1 cut(s) 226
AcsI RAATTY 1 cut(s) 777
AcuI CTGAAG 1 cut(s) 175
AcyI GRCGYC 3 cut(s) 298, 591, 1453
AdeI CACNNNGTG 1 cut(s) 1019
AfaI GTAC 2 cut(s) 849, 895
AfiI CCNNNNNNNGG 4 cut(s) 282, 283, 1019, 1391
AflIII ACRYGT 1 cut(s) 1321
AgsI TTSAA 3 cut(s) 553, 782, 1291
AjiI CACGTC 1 cut(s) 99
AjnI CCWGG 1 cut(s) 1015
AleI CACNNNNGTG 1 cut(s) 522
Alw26I GTCTC 9 cut(s) 262, 289, 332, 498, 570, 582, 659, 1265, 1523
AlwI GGATC 2 cut(s) 139, 396
Ama87I CYCGRG 2 cut(s) 265, 276
AoxI GGCC 2 cut(s) 226, 328
ApeKI GCWGC 1 cut(s) 1001
ApoI RAATTY 1 cut(s) 777
ArsI GACNNNNNNTTYG 2 cut(s) 1413, 1445
Asp700I GAANNNNTTC 1 cut(s) 351
AspLEI GCGC 2 cut(s) 464, 1455
AspS9I GGNCC 1 cut(s) 328
AsuC2I CCSGG 2 cut(s) 277, 278
AsuHPI GGTGA 1 cut(s) 292
AvaI CYCGRG 2 cut(s) 265, 276
BanI GGYRCC 1 cut(s) 1452
BarI GAAGNNNNNNTAC 2 cut(s) 877, 909
BbsI GAAGAC 1 cut(s) 12
BbvCI CCTCAGC 2 cut(s) 324, 438
BbvI GCAGC 1 cut(s) 988
BccI CCATC 4 cut(s) 389, 611, 787, 1300
BceAI ACGGC 1 cut(s) 1065
BciT130I CCWGG 1 cut(s) 1017
BcnI CCSGG 2 cut(s) 277, 278
BcoDI GTCTC 9 cut(s) 262, 289, 332, 498, 570, 582, 659, 1265, 1523
BfaI CTAG 1 cut(s) 603
BfmI CTRYAG 1 cut(s) 1104
BfoI RGCGCY 1 cut(s) 1456
BglII AGATCT 1 cut(s) 1336
BisI GCNGC 3 cut(s) 420, 952, 1002
BlpI GCTNAGC 1 cut(s) 450
BlsI GCNGC 3 cut(s) 421, 953, 1003
Bme1390I CCNGG 3 cut(s) 277, 278, 1017
BmeT110I CYCGRG 2 cut(s) 265, 276
BmgBI CACGTC 1 cut(s) 99
BmgT120I GGNCC 1 cut(s) 328
BmiI GGNNCC 3 cut(s) 121, 1383, 1454
BmrFI CCNGG 3 cut(s) 277, 278, 1017
BmsI GCATC 3 cut(s) 326, 639, 1194
BpiI GAAGAC 1 cut(s) 12
BplI GAGNNNNNCTC 6 cut(s) 286, 318, 579, 611, 1174, 1206
BpmI CTGGAG 1 cut(s) 1490
Bpu10I CCTNAGC 3 cut(s) 324, 438, 653
Bpu1102I GCTNAGC 1 cut(s) 450
BpuEI CTTGAG 2 cut(s) 313, 656
BpuMI CCSGG 2 cut(s) 277, 278
Bsa29I ATCGAT 1 cut(s) 84
BsaAI YACGTR 1 cut(s) 1351
BsaHI GRCGYC 3 cut(s) 298, 591, 1453
BsaI GGTCTC 2 cut(s) 659, 1523
BsaJI CCNNGG 1 cut(s) 276
BsaXI ACNNNNNCTCC 2 cut(s) 495, 525
Bsc4I CCNNNNNNNGG 4 cut(s) 282, 283, 1019, 1391
Bse1I ACTGG 3 cut(s) 842, 1401, 1533
Bse3DI GCAATG 2 cut(s) 429, 1081
BseBI CCWGG 1 cut(s) 1017
BseCI ATCGAT 1 cut(s) 84
BseDI CCNNGG 1 cut(s) 276
BseGI GGATG 3 cut(s) 31, 162, 1123
BseLI CCNNNNNNNGG 4 cut(s) 282, 283, 1019, 1391
BseMI GCAATG 2 cut(s) 429, 1081
BseMII CTCAG 5 cut(s) 228, 315, 429, 464, 610
BseNI ACTGG 3 cut(s) 842, 1401, 1533
BseRI GAGGAG 2 cut(s) 299, 516
BseXI GCAGC 1 cut(s) 988
Bsh1236I CGCG 1 cut(s) 951
Bsh1285I CGRYCG 1 cut(s) 345
BshFI GGCC 2 cut(s) 228, 330
BshNI GGYRCC 1 cut(s) 1452
BshVI ATCGAT 1 cut(s) 84
BsiEI CGRYCG 1 cut(s) 345
BsiHKCI CYCGRG 2 cut(s) 265, 276
BsiSI CCGG 1 cut(s) 277
BslFI GGGAC 1 cut(s) 299
BslI CCNNNNNNNGG 4 cut(s) 282, 283, 1019, 1391
BsmAI GTCTC 9 cut(s) 262, 289, 332, 498, 570, 582, 659, 1265, 1523
BsmBI CGTCTC 3 cut(s) 289, 332, 582
BsmFI GGGAC 1 cut(s) 299
BsmI GAATGC 1 cut(s) 551
BsnI GGCC 2 cut(s) 228, 330
Bso31I GGTCTC 2 cut(s) 659, 1523
BsoBI CYCGRG 2 cut(s) 265, 276
Bsp143I GATC 4 cut(s) 144, 388, 978, 1336
Bsp1720I GCTNAGC 1 cut(s) 450
BspACI CCGC 5 cut(s) 203, 305, 420, 951, 1206
BspANI GGCC 2 cut(s) 228, 330
BspCNI CTCAG 5 cut(s) 227, 316, 430, 463, 609
BspDI ATCGAT 1 cut(s) 84
BspFNI CGCG 1 cut(s) 951
BspHI TCATGA 1 cut(s) 1525
BspLI GGNNCC 3 cut(s) 121, 1383, 1454
BspMAI CTGCAG 1 cut(s) 1108
BspPI GGATC 2 cut(s) 139, 396
BspQI GCTCTTC 2 cut(s) 255, 357
BspT107I GGYRCC 1 cut(s) 1452
BspTNI GGTCTC 2 cut(s) 659, 1523
BsrBI CCGCTC 1 cut(s) 307
BsrDI GCAATG 2 cut(s) 429, 1081
BsrI ACTGG 3 cut(s) 842, 1401, 1533
BssECI CCNNGG 1 cut(s) 276
BssMI GATC 4 cut(s) 144, 388, 978, 1336
BssNI GRCGYC 3 cut(s) 298, 591, 1453
Bst2UI CCWGG 1 cut(s) 1017
Bst4CI ACNGT 4 cut(s) 112, 343, 511, 1249
Bst6I CTCTTC 5 cut(s) 255, 357, 414, 936, 1178
BstACI GRCGYC 3 cut(s) 298, 591, 1453
BstBAI YACGTR 1 cut(s) 1351
BstC8I GCNNGC 3 cut(s) 118, 376, 956
BstDEI CTNAG 8 cut(s) 214, 324, 438, 450, 596, 653, 671, 1340
BstF5I GGATG 3 cut(s) 31, 162, 1123
BstFNI CGCG 1 cut(s) 951
BstH2I RGCGCY 1 cut(s) 1456
BstHHI GCGC 2 cut(s) 464, 1455
BstKTI GATC 4 cut(s) 147, 391, 981, 1339
BstMAI GTCTC 9 cut(s) 262, 289, 332, 498, 570, 582, 659, 1265, 1523
BstMBI GATC 4 cut(s) 144, 388, 978, 1336
BstMCI CGRYCG 1 cut(s) 345
BstMWI GCNNNNNNNGC 1 cut(s) 1237
BstNI CCWGG 1 cut(s) 1017
BstNSI RCATGY 2 cut(s) 437, 958
BstSCI CCNGG 3 cut(s) 275, 276, 1015
BstSFI CTRYAG 1 cut(s) 1104
BstUI CGCG 1 cut(s) 951
BstV1I GCAGC 1 cut(s) 988
BstV2I GAAGAC 1 cut(s) 12
BstX2I RGATCY 1 cut(s) 1336
BstYI RGATCY 1 cut(s) 1336
Bsu15I ATCGAT 1 cut(s) 84
BsuRI GGCC 2 cut(s) 228, 330
BsuTUI ATCGAT 1 cut(s) 84
BtrI CACGTC 1 cut(s) 99
BtsCI GGATG 3 cut(s) 31, 162, 1123
BtsI GCAGTG 1 cut(s) 1113
BtsIMutI CAGTG 2 cut(s) 604, 1113
Cac8I GCNNGC 3 cut(s) 118, 376, 956
CciI TCATGA 1 cut(s) 1525
CfoI GCGC 2 cut(s) 464, 1455
Cfr13I GGNCC 1 cut(s) 328
Cfr9I CCCGGG 1 cut(s) 276
ClaI ATCGAT 1 cut(s) 84
CseI GACGC 2 cut(s) 306, 380
CsiI ACCWGGT 1 cut(s) 1015
Csp6I GTAC 2 cut(s) 848, 894
CviAII CATG 8 cut(s) 434, 722, 955, 961, 976, 1089, 1255, 1526
CviQI GTAC 2 cut(s) 848, 894
DdeI CTNAG 8 cut(s) 214, 324, 438, 450, 596, 653, 671, 1340
DinI GGCGCC 1 cut(s) 1454
DpnI GATC 4 cut(s) 146, 390, 980, 1338
DpnII GATC 4 cut(s) 144, 388, 978, 1336
DraIII CACNNNGTG 1 cut(s) 1019
EaeI YGGCCR 1 cut(s) 226
Eam1104I CTCTTC 5 cut(s) 255, 357, 414, 936, 1178
EarI CTCTTC 5 cut(s) 255, 357, 414, 936, 1178
Eco31I GGTCTC 2 cut(s) 659, 1523
Eco57I CTGAAG 1 cut(s) 175
Eco88I CYCGRG 2 cut(s) 265, 276
EcoRII CCWGG 1 cut(s) 1015
EgeI GGCGCC 1 cut(s) 1454
EheI GGCGCC 1 cut(s) 1454
Esp3I CGTCTC 3 cut(s) 289, 332, 582
FaeI CATG 8 cut(s) 437, 725, 958, 964, 979, 1092, 1258, 1529
FalI AAGNNNNNCTT 2 cut(s) 237, 269
FaqI GGGAC 1 cut(s) 299
FatI CATG 8 cut(s) 433, 721, 954, 960, 975, 1088, 1254, 1525
Fnu4HI GCNGC 3 cut(s) 420, 952, 1002
FokI GGATG 3 cut(s) 38, 149, 1110
Fsp4HI GCNGC 3 cut(s) 420, 952, 1002
FspBI CTAG 1 cut(s) 603
FspI TGCGCA 1 cut(s) 463
GlaI GCGC 2 cut(s) 463, 1454
GluI GCNGC 3 cut(s) 420, 952, 1002
GsuI CTGGAG 1 cut(s) 1490
HaeII RGCGCY 1 cut(s) 1456
HaeIII GGCC 2 cut(s) 228, 330
HapII CCGG 1 cut(s) 277
HgaI GACGC 2 cut(s) 306, 380
HhaI GCGC 2 cut(s) 464, 1455
Hin1I GRCGYC 3 cut(s) 298, 591, 1453
Hin1II CATG 8 cut(s) 437, 725, 958, 964, 979, 1092, 1258, 1529
Hin6I GCGC 2 cut(s) 462, 1453
HinP1I GCGC 2 cut(s) 462, 1453
HindIII AAGCTT 1 cut(s) 769
HinfI GANTC 3 cut(s) 287, 473, 797
HpaII CCGG 1 cut(s) 277
HphI GGTGA 1 cut(s) 292
Hpy188I TCNGA 2 cut(s) 357, 1100
Hpy99I CGWCG 2 cut(s) 374, 1100
HpyAV CCTTC 6 cut(s) 721, 813, 866, 879, 1289, 1297
HpyCH4III ACNGT 4 cut(s) 112, 343, 511, 1249
HpyCH4IV ACGT 5 cut(s) 98, 591, 903, 1321, 1350
HpyCH4V TGCA 5 cut(s) 116, 721, 1004, 1074, 1106
HpyF10VI GCNNNNNNNGC 1 cut(s) 1237
HpyF3I CTNAG 8 cut(s) 214, 324, 438, 450, 596, 653, 671, 1340
HpySE526I ACGT 5 cut(s) 98, 591, 903, 1321, 1350
Hsp92I GRCGYC 3 cut(s) 298, 591, 1453
Hsp92II CATG 8 cut(s) 437, 725, 958, 964, 979, 1092, 1258, 1529
HspAI GCGC 2 cut(s) 462, 1453
KasI GGCGCC 1 cut(s) 1452
Kzo9I GATC 4 cut(s) 144, 388, 978, 1336
LguI GCTCTTC 2 cut(s) 255, 357
LmnI GCTCC 2 cut(s) 125, 312
Lsp1109I GCAGC 1 cut(s) 988
LweI GCATC 3 cut(s) 326, 639, 1194
MabI ACCWGGT 1 cut(s) 1015
MaeI CTAG 1 cut(s) 603
MaeII ACGT 5 cut(s) 98, 591, 903, 1321, 1350
MaeIII GTNAC 4 cut(s) 478, 526, 1346, 1366
MalI GATC 4 cut(s) 146, 390, 980, 1338
MbiI CCGCTC 1 cut(s) 307
MboI GATC 4 cut(s) 144, 388, 978, 1336
MboII GAAGA 7 cut(s) 17, 242, 344, 401, 953, 1165, 1346
MflI RGATCY 1 cut(s) 1336
MluCI AATT 5 cut(s) 539, 660, 777, 931, 1005
Mly113I GGCGCC 1 cut(s) 1453
MlyI GAGTC 1 cut(s) 281
MmeI TCCRAC 1 cut(s) 1078
MroXI GAANNNNTTC 1 cut(s) 351
MseI TTAA 7 cut(s) 18, 485, 734, 1008, 1140, 1244, 1326
MslI CAYNNNNRTG 3 cut(s) 522, 959, 965
MspA1I CMGCKG 1 cut(s) 454
MspI CCGG 1 cut(s) 277
MspR9I CCNGG 3 cut(s) 277, 278, 1017
Mva1269I GAATGC 1 cut(s) 551
MvaI CCWGG 1 cut(s) 1017
MvnI CGCG 1 cut(s) 951
MwoI GCNNNNNNNGC 1 cut(s) 1237
NarI GGCGCC 1 cut(s) 1453
NciI CCSGG 2 cut(s) 277, 278
NdeII GATC 4 cut(s) 144, 388, 978, 1336
NlaIII CATG 8 cut(s) 437, 725, 958, 964, 979, 1092, 1258, 1529
NlaIV GGNNCC 3 cut(s) 121, 1383, 1454
NmeAIII GCCGAG 1 cut(s) 204
NmuCI GTSAC 1 cut(s) 478
NsbI TGCGCA 1 cut(s) 463
NspI RCATGY 2 cut(s) 437, 958
OliI CACNNNNGTG 1 cut(s) 522
PaeI GCATGC 1 cut(s) 958
PaeR7I CTCGAG 1 cut(s) 265
PagI TCATGA 1 cut(s) 1525
PciSI GCTCTTC 2 cut(s) 255, 357
PctI GAATGC 1 cut(s) 551
PdmI GAANNNNTTC 1 cut(s) 351
PfeI GAWTC 2 cut(s) 473, 797
PflMI CCANNNNNTGG 2 cut(s) 1019, 1391
PkrI GCNGC 3 cut(s) 421, 953, 1003
PleI GAGTC 1 cut(s) 281
PluTI GGCGCC 1 cut(s) 1456
PpsI GAGTC 1 cut(s) 281
Ppu21I YACGTR 1 cut(s) 1351
PsiI TTATAA 1 cut(s) 1202
Psp6I CCWGG 1 cut(s) 1015
PspGI CCWGG 1 cut(s) 1015
PspN4I GGNNCC 3 cut(s) 121, 1383, 1454
PspPI GGNCC 1 cut(s) 328
PstI CTGCAG 1 cut(s) 1108
PsuI RGATCY 1 cut(s) 1336
PvuII CAGCTG 1 cut(s) 454
RsaI GTAC 2 cut(s) 849, 895
RsaNI GTAC 2 cut(s) 848, 894
RseI CAYNNNNRTG 3 cut(s) 522, 959, 965
SapI GCTCTTC 2 cut(s) 255, 357
SaqAI TTAA 7 cut(s) 18, 485, 734, 1008, 1140, 1244, 1326
SatI GCNGC 3 cut(s) 420, 952, 1002
Sau3AI GATC 4 cut(s) 144, 388, 978, 1336
Sau96I GGNCC 1 cut(s) 328
SchI GAGTC 1 cut(s) 281
ScrFI CCNGG 3 cut(s) 277, 278, 1017
SexAI ACCWGGT 1 cut(s) 1015
SfaNI GCATC 3 cut(s) 326, 639, 1194
SfcI CTRYAG 1 cut(s) 1104
SfoI GGCGCC 1 cut(s) 1454
Sfr274I CTCGAG 1 cut(s) 265
SlaI CTCGAG 1 cut(s) 265
SmaI CCCGGG 1 cut(s) 278
SmiMI CAYNNNNRTG 3 cut(s) 522, 959, 965
SmlI CTYRAG 3 cut(s) 265, 292, 635
SmoI CTYRAG 3 cut(s) 265, 292, 635
SphI GCATGC 1 cut(s) 958
Sse9I AATT 5 cut(s) 539, 660, 777, 931, 1005
SsiI CCGC 5 cut(s) 203, 305, 420, 951, 1206
SspDI GGCGCC 1 cut(s) 1452
SspMI CTAG 1 cut(s) 603
StyD4I CCNGG 3 cut(s) 275, 276, 1015
TaaI ACNGT 4 cut(s) 112, 343, 511, 1249
TaiI ACGT 5 cut(s) 101, 594, 906, 1324, 1353
TaqI TCGA 5 cut(s) 84, 266, 345, 1155, 1420
TaqII GACCGA 1 cut(s) 466
TasI AATT 5 cut(s) 539, 660, 777, 931, 1005
TatI WGTACW 1 cut(s) 893
TauI GCSGC 2 cut(s) 422, 954
TfiI GAWTC 2 cut(s) 473, 797
Tru1I TTAA 7 cut(s) 18, 485, 734, 1008, 1140, 1244, 1326
Tru9I TTAA 7 cut(s) 18, 485, 734, 1008, 1140, 1244, 1326
TscAI CASTG 2 cut(s) 604, 1113
TseFI GTSAC 1 cut(s) 478
TseI GCWGC 1 cut(s) 1001
Tsp45I GTSAC 1 cut(s) 478
TspDTI ATGAA 6 cut(s) 45, 248, 840, 1112, 1308, 1347
TspGWI ACGGA 1 cut(s) 112
TspMI CCCGGG 1 cut(s) 276
TspRI CASTG 2 cut(s) 604, 1113
Van91I CCANNNNNTGG 2 cut(s) 1019, 1391
XapI RAATTY 1 cut(s) 777
XceI RCATGY 2 cut(s) 437, 958
XcmI CCANNNNNNNNNTGG 1 cut(s) 1023
XhoI CTCGAG 1 cut(s) 265
XmaI CCCGGG 1 cut(s) 276
XmnI GAANNNNTTC 1 cut(s) 351
XspI CTAG 1 cut(s) 603
ZraI GACGTC 1 cut(s) 592
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.