RLG00000029155

ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
OG0000404
Physical Location & Seq
Reverse (-)
33785048 .. 33792291
7244 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000029155

Sequence Viewer

Length: 1440 bp
ATGGCTACTAGTCAAGATGAAGGAGACGTAATAAAGCTAGTCTACAAGGCATCAGTTGCGGGGTGCGTGTCTACCTTAAACGAATTGATCGAAACAAGCCCACTCATTCTTAGAAAGTTTTCTTTGAGTACTTTCACTGAAACTCCCTTGCATGTATCTGCTTTGCTCGGCCACCATGACTTTACCAGAACCCTTCTCACTCATAATCCCAACCTCGCGAAGGAGTTGGACTCTTTCAGACGCTCACCTCTCCACTTGGCTTCTGCCGAGGGCCACGAGGAGATCGTTCAAGTTTTGTTACATGCAGATCATGTCGATGTCTGCTTGTTTCATGATCAGGATGGCAGAATCCCGCTTCACTATTCAGCCATGAGAGGACGACTTGGGGTCCTCAAGAAGTTGATACGAGCAAAGCCAGAGTCCATATTTGTGTCGGTTCTGAATAGTTCAAGAGAAACGGCTTTGCACTTGTGTGTTAAATATAATCATTTGGAGTGCTTGAAATTGTTAGTCGAACATGTGGGTGAACAAAGATCAGAATTCCTCCACTCAAAAGACACTGTTGGTGGCCAGACTATCCTGCACTTAGCTTTGGTTCTGAAGCAAACTGAGACAATAAGGTACCTGCTTTCTATACCAATTATACGAGAAGAAGCAAATGATGTGATCAGATCTTATGTCTTGGAGCACAACTCAGGAGATATCAGAAATCTTGAACTTCAACAAATTGTGATCGGCCACAACGATGACCACCATCATCAGCAACCATTGTCATCTGTGCCGCCAGGACCGACTGCTAATGTTCTTGACAACAATGCAGCGGAAGAAGTGTCAAAGGCAAGGTGGAGGACCAAGCTAATGAAATACCTGAAATACCGAACTGATTGGCTGGAAGATACCCGTGGCATGCTGATTGTTGTGGCCGGCATGATTGCAACGATGAGTTTCCAAGCTGCGGTTAATCCACCAGGTGGTGTTTGGCAAGGAAATAATACGGATTCTACAATTAATAGTTATGGAAGTCCTTCCTCAACCGAGTCACAGATATGTTACGCTGGAACTGCAGTTTTAGCCTGTGCAACGGACTACGGACTTAATTACTACTTCTGGTGGTTCATGAATTTCAATACCATCTCCTTCCTTGCTTCTTTGAGTGTTACTTCTTTACTTATTTGCGGTTTTCCTCTCCATAACCGGCTTTGTCTGTGGCTCTTATCAATGGGTATGTGTATCGTTCTCTCTTGCCTGGCACTAAGCTATCTATTTATTGTGAACATGATCATCCCTAATCAGGCTTTCGAGCTCTATATTAGTACTACTACTTGCCATAATATCATCTACGTTTGGGTTTCGTTGCTTGTCATGTTGGGTTTAATCCACACACTTCGCGTTTTCATTTGGCTGGGGAAGAGGCTGCGTCGCAGATTCAAACGTAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Ank_2 Ank_3 Ank_4 PGG

Protein Analysis

480

Amino Acids

54.05

Weight (kDa)

7.34

Isoelectric Point (pI)

43.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 20 - 105 3.6e-11 Ankyrin repeats (3 copies)
Ank_4 PF13637 84 - 135 2.1e-07 Ankyrin repeats (many copies)
Ank_2 PF12796 119 - 211 1.3e-12 Ankyrin repeats (3 copies)
PGG PF13962 295 - 425 8.2e-14 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000404)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G13950 AT4G13266
fragaria_vesca FvH4_7g06240 FvH4_7g06250 FvH4_7g06270
malus_domestica MD12G1213300.v1.1 MD12G1213900.v1.1 MD12G1214100.v1.1 MD12G1214700.v1.1 MD12G1214800.v1.1
prunus_persica Prupe.2G107700_v2.0.a1 Prupe.3G142200_v2.0.a1 Prupe.3G154100_v2.0.a1 Prupe.3G154300_v2.0.a1 Prupe.3G154900_v2.0.a1 Prupe.3G155100_v2.0.a1
pyrus_communis pycom12g20010 pycom12g20080 pycom12g20090 pycom12g20100
rosa_chinensis RchiOBHm_Chr1g0341001 RchiOBHm_Chr1g0341021 RchiOBHm_Chr1g0341891 RchiOBHm_Chr1g0342341 RchiOBHm_Chr3g0490431
rosa_laevigata RLG00000022889 RLG00000029016 RLG00000029039 RLG00000029059 RLG00000029061 RLG00000029065 RLG00000029115 RLG00000029155 RLG00000033311 RLG00000033312
rosa_multiflora Rmu_sc0000404.1_g000006 Rmu_sc0001836.1_g000015 Rmu_sc0001836.1_g000050 Rmu_sc0002200.1_g000003 Rmu_sc0003862.1_g000020 Rmu_sc0005193.1_g000001 Rmu_sc0005193.1_g000002 Rmu_sc0008453.1_g000008 Rmu_sc0008453.1_g000009 Rmu_sc0008453.1_g000010 Rmu_sc0008862.1_g000001 Rmu_sc0011195.1_g000003 Rmu_sc0014077.1_g000001
rosa_roxburghii Rroxscaffold_4G00311670 Rroxscaffold_4G00311730 Rroxscaffold_4G00311750 Rroxscaffold_4G00312290 Rroxscaffold_6G00393430
rosa_rugosa Rorug01G0153800.1 Rorug01G0153900.1 Rorug01G0160100.1 Rorug03G0243800
rosa_samantha Rh1AG166400 Rh1AG168200 Rh1AG174100 Rh1AG174700 Rh1AG179000 Rh1BG132600 Rh1BG136500 Rh1BG142200 Rh1BG142800 Rh1BG143200 Rh1BG146200 Rh1BG147000 Rh1BG147100 Rh1CG154800 Rh1CG161900 Rh1CG162700 Rh1CG166000 Rh1DG167500 Rh1DG169900 Rh1DG174000 Rh1DG174400 Rh1DG174700 Rh1DG174800 Rh1DG178200 Rh1DG179000 Rh1DG179100 Rh3AG292800 Rh3BG329600 Rh3CG326900 Rh3DG326200 Rh5BG218300 Rh7CG326800 Rh7DG307100
rosa_wichuraiana Rw0G006190 Rw0G007830 Rw0G009970 Rw0G009980 Rw1G013880 Rw1G014000 Rw1G014500 Rw1G014560 Rw1G014920 Rw3G025950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 633
Acc65I GGTACC 1 cut(s) 621
AccB1I GGYRCC 1 cut(s) 621
AccB7I CCANNNNNTGG 1 cut(s) 971
AccI GTMKAC 2 cut(s) 42, 71
AccII CGCG 2 cut(s) 218, 1389
AciI CCGC 6 cut(s) 59, 353, 782, 821, 956, 1176
AcoI YGGCCR 4 cut(s) 169, 568, 736, 921
AcsI RAATTY 2 cut(s) 539, 1120
AcuI CTGAAG 1 cut(s) 620
AdeI CACNNNGTG 1 cut(s) 971
AfaI GTAC 3 cut(s) 130, 623, 1315
AfiI CCNNNNNNNGG 4 cut(s) 220, 955, 971, 1291
AflIII ACRYGT 1 cut(s) 517
AgsI TTSAA 7 cut(s) 290, 450, 502, 716, 722, 1126, 1429
AhdI GACNNNNNGTC 1 cut(s) 386
AhlI ACTAGT 1 cut(s) 8
AjnI CCWGG 3 cut(s) 784, 967, 1245
AleI CACNNNNGTG 1 cut(s) 471
AluBI AGCT 6 cut(s) 37, 590, 856, 953, 1257, 1303
AluI AGCT 6 cut(s) 37, 590, 856, 953, 1257, 1303
Alw21I GWGCWC 2 cut(s) 690, 1305
Alw26I GTCTC 2 cut(s) 18, 605
AoxI GGCC 5 cut(s) 169, 271, 568, 736, 921
ApeKI GCWGC 3 cut(s) 818, 953, 1414
ApoI RAATTY 2 cut(s) 539, 1120
ArsI GACNNNNNNTTYG 2 cut(s) 404, 436
AseI ATTAAT 1 cut(s) 1008
Asp700I GAANNNNTTC 2 cut(s) 118, 1024
Asp718I GGTACC 1 cut(s) 621
AspS9I GGNCC 4 cut(s) 271, 388, 788, 849
AsuHPI GGTGA 2 cut(s) 237, 536
AvaII GGWCC 3 cut(s) 388, 788, 849
BalI TGGCCA 1 cut(s) 570
BanI GGYRCC 1 cut(s) 621
BanII GRGCYC 1 cut(s) 1305
BauI CACGAG 1 cut(s) 275
Bbv12I GWGCWC 2 cut(s) 690, 1305
BbvI GCAGC 3 cut(s) 830, 940, 1401
BccI CCATC 3 cut(s) 335, 762, 1139
BceAI ACGGC 1 cut(s) 474
BciT130I CCWGG 3 cut(s) 786, 969, 1247
BclI TGATCA 3 cut(s) 334, 666, 1278
BcoDI GTCTC 2 cut(s) 18, 605
BcuI ACTAGT 1 cut(s) 8
BfaI CTAG 2 cut(s) 9, 38
BfmI CTRYAG 1 cut(s) 1062
BfuAI ACCTGC 1 cut(s) 633
BglII AGATCT 1 cut(s) 671
BisI GCNGC 4 cut(s) 782, 819, 954, 1415
BlsI GCNGC 4 cut(s) 783, 820, 955, 1416
BmcAI AGTACT 2 cut(s) 130, 1315
Bme1390I CCNGG 3 cut(s) 786, 969, 1247
Bme18I GGWCC 3 cut(s) 388, 788, 849
BmeRI GACNNNNNGTC 1 cut(s) 386
BmgT120I GGNCC 4 cut(s) 271, 388, 788, 849
BmiI GGNNCC 2 cut(s) 389, 623
BmrFI CCNGG 3 cut(s) 786, 969, 1247
BmsI GCATC 1 cut(s) 59
BplI GAGNNNNNCTC 4 cut(s) 215, 247, 677, 709
BpuEI CTTGAG 1 cut(s) 377
BsaJI CCNNGG 2 cut(s) 267, 901
BsaXI ACNNNNNCTCC 2 cut(s) 127, 157
Bsc4I CCNNNNNNNGG 4 cut(s) 220, 955, 971, 1291
Bse118I RCCGGY 2 cut(s) 923, 1194
BseBI CCWGG 3 cut(s) 786, 969, 1247
BseDI CCNNGG 2 cut(s) 267, 901
BseGI GGATG 2 cut(s) 346, 1281
BseLI CCNNNNNNNGG 4 cut(s) 220, 955, 971, 1291
BseMII CTCAG 2 cut(s) 600, 708
BseRI GAGGAG 1 cut(s) 293
BseXI GCAGC 3 cut(s) 830, 940, 1401
BseYI CCCAGC 1 cut(s) 1402
BsgI GTGCAG 1 cut(s) 566
Bsh1236I CGCG 2 cut(s) 218, 1389
BshFI GGCC 5 cut(s) 171, 273, 570, 738, 923
BshNI GGYRCC 1 cut(s) 621
BsiHKAI GWGCWC 2 cut(s) 690, 1305
BsiSI CCGG 2 cut(s) 924, 1195
BslI CCNNNNNNNGG 4 cut(s) 220, 955, 971, 1291
BsmAI GTCTC 2 cut(s) 18, 605
BsmBI CGTCTC 1 cut(s) 18
BsnI GGCC 5 cut(s) 171, 273, 570, 738, 923
Bsp1286I GDGCHC 2 cut(s) 690, 1305
Bsp143I GATC 9 cut(s) 87, 282, 307, 334, 533, 666, 671, 732, 1278
Bsp68I TCGCGA 1 cut(s) 218
BspACI CCGC 6 cut(s) 59, 353, 782, 821, 956, 1176
BspANI GGCC 5 cut(s) 171, 273, 570, 738, 923
BspCNI CTCAG 2 cut(s) 601, 707
BspFNI CGCG 2 cut(s) 218, 1389
BspHI TCATGA 2 cut(s) 331, 1116
BspLI GGNNCC 2 cut(s) 389, 623
BspMAI CTGCAG 1 cut(s) 1066
BspMI ACCTGC 1 cut(s) 633
BspT107I GGYRCC 1 cut(s) 621
BsrFI RCCGGY 2 cut(s) 923, 1194
BssAI RCCGGY 2 cut(s) 923, 1194
BssECI CCNNGG 2 cut(s) 267, 901
BssMI GATC 9 cut(s) 87, 282, 307, 334, 533, 666, 671, 732, 1278
BssSI CACGAG 1 cut(s) 275
Bst2BI CACGAG 1 cut(s) 275
Bst2UI CCWGG 3 cut(s) 786, 969, 1247
Bst4CI ACNGT 1 cut(s) 562
Bst6I CTCTTC 1 cut(s) 1403
BstAPI GCANNNNNTGC 1 cut(s) 56
BstC8I GCNNGC 2 cut(s) 908, 925
BstDEI CTNAG 5 cut(s) 110, 586, 609, 694, 1253
BstDSI CCRYGG 1 cut(s) 901
BstENI CCTNNNNNAGG 1 cut(s) 218
BstF5I GGATG 2 cut(s) 346, 1281
BstFNI CGCG 2 cut(s) 218, 1389
BstKTI GATC 9 cut(s) 90, 285, 310, 337, 536, 669, 674, 735, 1281
BstMAI GTCTC 2 cut(s) 18, 605
BstMBI GATC 9 cut(s) 87, 282, 307, 334, 533, 666, 671, 732, 1278
BstMWI GCNNNNNNNGC 3 cut(s) 56, 1061, 1070
BstNI CCWGG 3 cut(s) 786, 969, 1247
BstNSI RCATGY 4 cut(s) 155, 305, 521, 910
BstSCI CCNGG 3 cut(s) 784, 967, 1245
BstSFI CTRYAG 1 cut(s) 1062
BstUI CGCG 2 cut(s) 218, 1389
BstV1I GCAGC 3 cut(s) 830, 940, 1401
BstX2I RGATCY 1 cut(s) 671
BstYI RGATCY 1 cut(s) 671
BsuRI GGCC 5 cut(s) 171, 273, 570, 738, 923
BtgI CCRYGG 1 cut(s) 901
BtsCI GGATG 2 cut(s) 346, 1281
BtsIMutI CAGTG 2 cut(s) 135, 558
BtuMI TCGCGA 1 cut(s) 218
BveI ACCTGC 1 cut(s) 633
Cac8I GCNNGC 2 cut(s) 908, 925
CciI TCATGA 2 cut(s) 331, 1116
Cfr10I RCCGGY 2 cut(s) 923, 1194
Cfr13I GGNCC 4 cut(s) 271, 388, 788, 849
CseI GACGC 2 cut(s) 249, 1406
CsiI ACCWGGT 1 cut(s) 967
Csp6I GTAC 3 cut(s) 129, 622, 1314
CviQI GTAC 3 cut(s) 129, 622, 1314
DdeI CTNAG 5 cut(s) 110, 586, 609, 694, 1253
DpnI GATC 9 cut(s) 89, 284, 309, 336, 535, 668, 673, 734, 1280
DpnII GATC 9 cut(s) 87, 282, 307, 334, 533, 666, 671, 732, 1278
DraIII CACNNNGTG 1 cut(s) 971
DriI GACNNNNNGTC 1 cut(s) 386
EaeI YGGCCR 4 cut(s) 169, 568, 736, 921
Eam1104I CTCTTC 1 cut(s) 1403
Eam1105I GACNNNNNGTC 1 cut(s) 386
EarI CTCTTC 1 cut(s) 1403
Ecl136II GAGCTC 1 cut(s) 1303
Eco24I GRGCYC 1 cut(s) 1305
Eco32I GATATC 1 cut(s) 703
Eco47I GGWCC 3 cut(s) 388, 788, 849
Eco53kI GAGCTC 1 cut(s) 1303
Eco57I CTGAAG 1 cut(s) 620
EcoICRI GAGCTC 1 cut(s) 1303
EcoNI CCTNNNNNAGG 1 cut(s) 218
EcoO109I RGGNCCY 1 cut(s) 388
EcoRI GAATTC 1 cut(s) 539
EcoRII CCWGG 3 cut(s) 784, 967, 1245
EcoRV GATATC 1 cut(s) 703
EcoT38I GRGCYC 1 cut(s) 1305
Esp3I CGTCTC 1 cut(s) 18
FauI CCCGC 2 cut(s) 52, 360
FbaI TGATCA 3 cut(s) 334, 666, 1278
FblI GTMKAC 2 cut(s) 42, 71
Fnu4HI GCNGC 4 cut(s) 782, 819, 954, 1415
FokI GGATG 2 cut(s) 353, 1268
FriOI GRGCYC 1 cut(s) 1305
Fsp4HI GCNGC 4 cut(s) 782, 819, 954, 1415
FspBI CTAG 2 cut(s) 9, 38
GluI GCNGC 4 cut(s) 782, 819, 954, 1415
GsaI CCCAGC 1 cut(s) 1406
HaeIII GGCC 5 cut(s) 171, 273, 570, 738, 923
HapII CCGG 2 cut(s) 924, 1195
HgaI GACGC 2 cut(s) 249, 1406
HinfI GANTC 6 cut(s) 230, 348, 419, 998, 1037, 1425
HpaII CCGG 2 cut(s) 924, 1195
HphI GGTGA 2 cut(s) 237, 536
Hpy166II GTNNAC 4 cut(s) 43, 72, 527, 1273
Hpy188I TCNGA 6 cut(s) 239, 441, 538, 600, 671, 707
Hpy8I GTNNAC 4 cut(s) 43, 72, 527, 1273
Hpy99I CGWCG 1 cut(s) 1422
HpyAV CCTTC 5 cut(s) 14, 203, 214, 1035, 1147
HpyCH4III ACNGT 1 cut(s) 562
HpyCH4IV ACGT 3 cut(s) 27, 1341, 1432
HpyCH4V TGCA 8 cut(s) 151, 305, 466, 583, 818, 935, 1064, 1079
HpyF10VI GCNNNNNNNGC 3 cut(s) 56, 1061, 1070
HpyF3I CTNAG 5 cut(s) 110, 586, 609, 694, 1253
HpySE526I ACGT 3 cut(s) 27, 1341, 1432
KpnI GGTACC 1 cut(s) 625
KroI GCCGGC 1 cut(s) 923
KroNI GCCGGC 1 cut(s) 925
Ksp22I TGATCA 3 cut(s) 334, 666, 1278
Kzo9I GATC 9 cut(s) 87, 282, 307, 334, 533, 666, 671, 732, 1278
LmnI GCTCC 1 cut(s) 685
Lsp1109I GCAGC 3 cut(s) 830, 940, 1401
LweI GCATC 1 cut(s) 59
MabI ACCWGGT 1 cut(s) 967
MaeI CTAG 2 cut(s) 9, 38
MaeII ACGT 3 cut(s) 27, 1341, 1432
MaeIII GTNAC 4 cut(s) 297, 1038, 1049, 1156
MalI GATC 9 cut(s) 89, 284, 309, 336, 535, 668, 673, 734, 1280
MboI GATC 9 cut(s) 87, 282, 307, 334, 533, 666, 671, 732, 1278
MboII GAAGA 4 cut(s) 662, 836, 905, 1420
MflI RGATCY 1 cut(s) 671
MhlI GDGCHC 2 cut(s) 690, 1305
MlsI TGGCCA 1 cut(s) 570
MluCI AATT 9 cut(s) 83, 503, 539, 639, 726, 1005, 1096, 1120, 1435
MluNI TGGCCA 1 cut(s) 570
MlyI GAGTC 3 cut(s) 224, 428, 1046
MmeI TCCRAC 1 cut(s) 207
Mox20I TGGCCA 1 cut(s) 570
MroNI GCCGGC 1 cut(s) 923
MroXI GAANNNNTTC 2 cut(s) 118, 1024
MscI TGGCCA 1 cut(s) 570
MseI TTAA 7 cut(s) 77, 477, 960, 1008, 1095, 1373, 1438
MslI CAYNNNNRTG 6 cut(s) 315, 428, 471, 522, 744, 1045
Msp20I TGGCCA 1 cut(s) 570
MspA1I CMGCKG 1 cut(s) 821
MspI CCGG 2 cut(s) 924, 1195
MspR9I CCNGG 3 cut(s) 786, 969, 1247
MvaI CCWGG 3 cut(s) 786, 969, 1247
MvnI CGCG 2 cut(s) 218, 1389
MwoI GCNNNNNNNGC 3 cut(s) 56, 1061, 1070
NaeI GCCGGC 1 cut(s) 925
NdeII GATC 9 cut(s) 87, 282, 307, 334, 533, 666, 671, 732, 1278
NgoMIV GCCGGC 1 cut(s) 923
NlaIV GGNNCC 2 cut(s) 389, 623
NmeAIII GCCGAG 2 cut(s) 147, 292
NmuCI GTSAC 1 cut(s) 1038
NruI TCGCGA 1 cut(s) 218
NspI RCATGY 4 cut(s) 155, 305, 521, 910
OliI CACNNNNGTG 1 cut(s) 471
PaeI GCATGC 1 cut(s) 910
PagI TCATGA 2 cut(s) 331, 1116
PciI ACATGT 1 cut(s) 517
PcsI WCGNNNNNNNCGW 3 cut(s) 87, 282, 741
PdiI GCCGGC 1 cut(s) 925
PdmI GAANNNNTTC 2 cut(s) 118, 1024
PfeI GAWTC 3 cut(s) 348, 998, 1425
PflMI CCANNNNNTGG 1 cut(s) 971
PkrI GCNGC 4 cut(s) 783, 820, 955, 1416
PleI GAGTC 3 cut(s) 224, 427, 1045
PpsI GAGTC 3 cut(s) 224, 427, 1045
PpuMI RGGWCCY 1 cut(s) 388
PscI ACATGT 1 cut(s) 517
PshBI ATTAAT 1 cut(s) 1008
Psp124BI GAGCTC 1 cut(s) 1305
Psp5II RGGWCCY 1 cut(s) 388
Psp6I CCWGG 3 cut(s) 784, 967, 1245
PspFI CCCAGC 1 cut(s) 1402
PspGI CCWGG 3 cut(s) 784, 967, 1245
PspN4I GGNNCC 2 cut(s) 389, 623
PspPI GGNCC 4 cut(s) 271, 388, 788, 849
PspPPI RGGWCCY 1 cut(s) 388
PstI CTGCAG 1 cut(s) 1066
PsuI RGATCY 1 cut(s) 671
RruI TCGCGA 1 cut(s) 218
RsaI GTAC 3 cut(s) 130, 623, 1315
RsaNI GTAC 3 cut(s) 129, 622, 1314
RseI CAYNNNNRTG 6 cut(s) 315, 428, 471, 522, 744, 1045
SacI GAGCTC 1 cut(s) 1305
SaqAI TTAA 7 cut(s) 77, 477, 960, 1008, 1095, 1373, 1438
SatI GCNGC 4 cut(s) 782, 819, 954, 1415
Sau3AI GATC 9 cut(s) 87, 282, 307, 334, 533, 666, 671, 732, 1278
Sau96I GGNCC 4 cut(s) 271, 388, 788, 849
ScaI AGTACT 2 cut(s) 130, 1315
SchI GAGTC 3 cut(s) 224, 428, 1046
ScrFI CCNGG 3 cut(s) 786, 969, 1247
SduI GDGCHC 2 cut(s) 690, 1305
SexAI ACCWGGT 1 cut(s) 967
SfaNI GCATC 1 cut(s) 59
SfcI CTRYAG 1 cut(s) 1062
SinI GGWCC 3 cut(s) 388, 788, 849
SmiMI CAYNNNNRTG 6 cut(s) 315, 428, 471, 522, 744, 1045
SmlI CTYRAG 1 cut(s) 392
SmoI CTYRAG 1 cut(s) 392
SpeI ACTAGT 1 cut(s) 8
SphI GCATGC 1 cut(s) 910
Sse9I AATT 9 cut(s) 83, 503, 539, 639, 726, 1005, 1096, 1120, 1435
SsiI CCGC 6 cut(s) 59, 353, 782, 821, 956, 1176
SspMI CTAG 2 cut(s) 9, 38
SstI GAGCTC 1 cut(s) 1305
StyD4I CCNGG 3 cut(s) 784, 967, 1245
TaaI ACNGT 1 cut(s) 562
TaiI ACGT 3 cut(s) 30, 1344, 1435
TaqI TCGA 4 cut(s) 90, 315, 513, 1299
TaqII GACCGA 1 cut(s) 805
TasI AATT 9 cut(s) 83, 503, 539, 639, 726, 1005, 1096, 1120, 1435
TatI WGTACW 2 cut(s) 128, 1313
TauI GCSGC 1 cut(s) 784
TfiI GAWTC 3 cut(s) 348, 998, 1425
Tru1I TTAA 7 cut(s) 77, 477, 960, 1008, 1095, 1373, 1438
Tru9I TTAA 7 cut(s) 77, 477, 960, 1008, 1095, 1373, 1438
TscAI CASTG 2 cut(s) 142, 565
TseFI GTSAC 1 cut(s) 1038
TseI GCWGC 3 cut(s) 818, 953, 1414
Tsp45I GTSAC 1 cut(s) 1038
TspDTI ATGAA 6 cut(s) 33, 320, 875, 1105, 1133, 1384
TspGWI ACGGA 3 cut(s) 1010, 1097, 1104
TspRI CASTG 2 cut(s) 142, 565
Van91I CCANNNNNTGG 1 cut(s) 971
VpaK11BI GGWCC 3 cut(s) 388, 788, 849
VspI ATTAAT 1 cut(s) 1008
XagI CCTNNNNNAGG 1 cut(s) 218
XapI RAATTY 2 cut(s) 539, 1120
XceI RCATGY 4 cut(s) 155, 305, 521, 910
XcmI CCANNNNNNNNNTGG 1 cut(s) 975
XmiI GTMKAC 2 cut(s) 42, 71
XmnI GAANNNNTTC 2 cut(s) 118, 1024
XspI CTAG 2 cut(s) 9, 38
ZrmI AGTACT 2 cut(s) 130, 1315
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.