Rroxscaffold_4G00311730

ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
OG0000404
Physical Location & Seq
Forward (+)
34295003 .. 34298032
3030 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00311730.1

Sequence Viewer

Length: 1566 bp
ATGGAGATTAGAAAGGATCATGATGGAGATGATACACTGAGACTCTTCCACGCATCAGTGGAAGGATCAATTTCATCGCTAAACACTTTGATCCAAAACGATCCACTACTCCTGAGAAGAGTTTCTCTGACTACATTGAGTGAAACCCCATTGCATATTTCAGCTTTGCTTGGCCACCTTGAATTTTCCAAAATCATTCTCACTCATAATCCAAGACTTGCCACGGAGTTGGACTCCTTACGGCGCTCACCCCTGCACTTGGCTTCGGCAGAAGGACACAAGGAGCTCGTACAAGCTTTGCTTGCATTTCCTGATGCATGCTTGTTTTACGATCAGGAGGGGAGAATCCCTCTGCATTATGCTGCCATGAGAGGACGAGTTGAGGTGGTCAAGGAGCTGACGCGTGCAATGCCTCAGTGTATTGCTCTTGTGGTTCTGGACAGATCAAGAGAAACAAGTTTGCATCTTTGTGTCAAGCATAACCGCCTGGACTGCTTGAAAATTTTAGTGAAAAAAGTGGGAGGGAATAGCGACTTGCTCAACTCAGGAACTGGCTATAATGCTAGCATGACAGTACTGAGGTTAGCTATGATGCTAAGGCAAACTGAGACCATAACATACCTGGTTTCACTACCTGCTATAAGCAAGAATCTTGTAAACAATGTGGTCTTGGAGACCTTGGAATGTGGTCCCAGAGACTTTAGAAGCCTAGAAATTCAACAGATTTTGATGGACGCATGTATCAATAAAAACGAAAAAGGTGAGTACCAGCAACAAATATGCTCAACAACACCACCTCACCCGCCACCATCACAATCCACTAAAGTCGTAACAGGACTCCCATGGTTGTGGATGAAATTAATGCAATGCTTGAACTACAAAAATCTGCTCCCACGGTTTTGGAAGAAATTAATGCAATGCTTGAACTACAACAAGAGTGATCGTTGGTTAGAAGAGACACGCGGCATGTTGATGGTTGTCGGTACCATGATATCAACAATGACTTTCCAAGCAGCCATGAACCCACCGGGTGGGGTTTGGCAAGAGAATGTAAAGCCATTTAGGCTATTGAGCATTGGAAAAGAATACTGTTCAACAGAAGACCCATGCTATCCTGGAACTGCAGTGTTGGGCTATGTGTGGGAAGAGCTAATGCAGGACTTCATTAAGTTCAACACCATCTCTTTCATTGCTTCTCTTTGTGTTACCCTTTTTCTTATCAGCGGATTTCCTCTGACAAATCGAATATGTATGTGGTTCTTATCAATGGCTATGTGCGTCACTATCACATTCACTGGTCTTACTTACCTAGTTGGTGTTTACATGGTGATGCCAAATAATGTTGCAAATCATCTTGATCGTAAGTACGCACCAGTAGGAGTTTGTGTTTGGATTGGATTGCTTGTAATGGTTAGTGCATTTCATACTTTTCGTTTTCTCACTTGGCTTGTGAAGATGGTCGTGAACTCCAAGTTCAGATGTAAGAGCAGGGAAAATGATATGCCCATAGAGGATGGAGGGTCGATTGATCAATTCATATGGACGAAGAAATGCGGTTGCTGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Ank_2 Ank_3 Ank_4 PGG

Protein Analysis

521

Amino Acids

59.05

Weight (kDa)

8.53

Isoelectric Point (pI)

43.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 15 - 101 5.3e-09 Ankyrin repeats (3 copies)
Ank_4 PF13637 85 - 131 5.9e-07 Ankyrin repeats (many copies)
Ank_2 PF12796 110 - 172 1.8e-09 Ankyrin repeats (3 copies)
PGG PF13962 315 - 443 1.9e-17 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000404)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G13950 AT4G13266
fragaria_vesca FvH4_7g06240 FvH4_7g06250 FvH4_7g06270
malus_domestica MD12G1213300.v1.1 MD12G1213900.v1.1 MD12G1214100.v1.1 MD12G1214700.v1.1 MD12G1214800.v1.1
prunus_persica Prupe.2G107700_v2.0.a1 Prupe.3G142200_v2.0.a1 Prupe.3G154100_v2.0.a1 Prupe.3G154300_v2.0.a1 Prupe.3G154900_v2.0.a1 Prupe.3G155100_v2.0.a1
pyrus_communis pycom12g20010 pycom12g20080 pycom12g20090 pycom12g20100
rosa_chinensis RchiOBHm_Chr1g0341001 RchiOBHm_Chr1g0341021 RchiOBHm_Chr1g0341891 RchiOBHm_Chr1g0342341 RchiOBHm_Chr3g0490431
rosa_laevigata RLG00000022889 RLG00000029016 RLG00000029039 RLG00000029059 RLG00000029061 RLG00000029065 RLG00000029115 RLG00000029155 RLG00000033311 RLG00000033312
rosa_multiflora Rmu_sc0000404.1_g000006 Rmu_sc0001836.1_g000015 Rmu_sc0001836.1_g000050 Rmu_sc0002200.1_g000003 Rmu_sc0003862.1_g000020 Rmu_sc0005193.1_g000001 Rmu_sc0005193.1_g000002 Rmu_sc0008453.1_g000008 Rmu_sc0008453.1_g000009 Rmu_sc0008453.1_g000010 Rmu_sc0008862.1_g000001 Rmu_sc0011195.1_g000003 Rmu_sc0014077.1_g000001
rosa_roxburghii Rroxscaffold_4G00311670 Rroxscaffold_4G00311730 Rroxscaffold_4G00311750 Rroxscaffold_4G00312290 Rroxscaffold_6G00393430
rosa_rugosa Rorug01G0153800.1 Rorug01G0153900.1 Rorug01G0160100.1 Rorug03G0243800
rosa_samantha Rh1AG166400 Rh1AG168200 Rh1AG174100 Rh1AG174700 Rh1AG179000 Rh1BG132600 Rh1BG136500 Rh1BG142200 Rh1BG142800 Rh1BG143200 Rh1BG146200 Rh1BG147000 Rh1BG147100 Rh1CG154800 Rh1CG161900 Rh1CG162700 Rh1CG166000 Rh1DG167500 Rh1DG169900 Rh1DG174000 Rh1DG174400 Rh1DG174700 Rh1DG174800 Rh1DG178200 Rh1DG179000 Rh1DG179100 Rh3AG292800 Rh3BG329600 Rh3CG326900 Rh3DG326200 Rh5BG218300 Rh7CG326800 Rh7DG307100
rosa_wichuraiana Rw0G006190 Rw0G007830 Rw0G009970 Rw0G009980 Rw1G013880 Rw1G014000 Rw1G014500 Rw1G014560 Rw1G014920 Rw3G025950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 643
Acc65I GGTACC 1 cut(s) 983
AccB1I GGYRCC 1 cut(s) 983
AccB7I CCANNNNNTGG 1 cut(s) 1031
AccII CGCG 2 cut(s) 403, 963
AciI CCGC 5 cut(s) 484, 803, 963, 1224, 1554
AclWI GGATC 4 cut(s) 24, 73, 85, 95
AcoI YGGCCR 1 cut(s) 172
AcsI RAATTY 3 cut(s) 182, 501, 714
AdeI CACNNNGTG 1 cut(s) 1031
AfaI GTAC 5 cut(s) 291, 576, 767, 985, 1367
AfiI CCNNNNNNNGG 2 cut(s) 259, 1031
AflIII ACRYGT 1 cut(s) 401
AgsI TTSAA 7 cut(s) 182, 499, 719, 874, 925, 1095, 1174
AjnI CCWGG 3 cut(s) 486, 621, 1114
AluBI AGCT 6 cut(s) 164, 286, 296, 397, 587, 1150
AluI AGCT 6 cut(s) 164, 286, 296, 397, 587, 1150
Alw21I GWGCWC 1 cut(s) 288
Alw26I GTCTC 5 cut(s) 34, 602, 668, 690, 950
AlwI GGATC 4 cut(s) 24, 73, 85, 95
AlwNI CAGNNNCTG 1 cut(s) 551
AoxI GGCC 1 cut(s) 172
ApeKI GCWGC 3 cut(s) 362, 1013, 1560
ApoI RAATTY 3 cut(s) 182, 501, 714
AseI ATTAAT 2 cut(s) 860, 911
Asp700I GAANNNNTTC 1 cut(s) 121
Asp718I GGTACC 1 cut(s) 983
AspLEI GCGC 1 cut(s) 246
AspS9I GGNCC 1 cut(s) 689
AsuC2I CCSGG 1 cut(s) 1029
AsuHPI GGTGA 4 cut(s) 240, 773, 791, 1339
AsuNHI GCTAGC 1 cut(s) 563
AvaII GGWCC 1 cut(s) 689
BaeI ACNNNNGTAYC 2 cut(s) 724, 757
BalI TGGCCA 1 cut(s) 174
BanI GGYRCC 1 cut(s) 983
BanII GRGCYC 1 cut(s) 288
BbsI GAAGAC 1 cut(s) 1107
Bbv12I GWGCWC 1 cut(s) 288
BbvI GCAGC 3 cut(s) 349, 1025, 1547
BccI CCATC 7 cut(s) 17, 724, 817, 967, 1187, 1450, 1508
BceAI ACGGC 1 cut(s) 257
BciT130I CCWGG 3 cut(s) 488, 623, 1116
BclI TGATCA 1 cut(s) 1528
BcnI CCSGG 1 cut(s) 1029
BcoDI GTCTC 5 cut(s) 34, 602, 668, 690, 950
BfaI CTAG 3 cut(s) 564, 710, 1310
BfmI CTRYAG 1 cut(s) 1122
BfoI RGCGCY 1 cut(s) 247
BfuAI ACCTGC 1 cut(s) 643
BglI GCCNNNNNGGC 1 cut(s) 1063
BisI GCNGC 4 cut(s) 363, 964, 1014, 1561
BlsI GCNGC 4 cut(s) 364, 965, 1015, 1562
BmcAI AGTACT 1 cut(s) 576
Bme1390I CCNGG 4 cut(s) 488, 623, 1029, 1116
Bme18I GGWCC 1 cut(s) 689
BmgT120I GGNCC 1 cut(s) 689
BmiI GGNNCC 2 cut(s) 691, 985
BmrFI CCNGG 4 cut(s) 488, 623, 1029, 1116
BmsI GCATC 5 cut(s) 62, 304, 472, 582, 1320
BmtI GCTAGC 1 cut(s) 567
BpiI GAAGAC 1 cut(s) 1107
BplI GAGNNNNNCTC 4 cut(s) 218, 250, 334, 366
Bpu10I CCTNAGC 1 cut(s) 596
BpuMI CCSGG 1 cut(s) 1029
BsaI GGTCTC 2 cut(s) 602, 668
BsaJI CCNNGG 4 cut(s) 222, 678, 842, 893
BsaXI ACNNNNNCTCC 2 cut(s) 1371, 1401
Bsc4I CCNNNNNNNGG 2 cut(s) 259, 1031
Bse1I ACTGG 3 cut(s) 556, 1300, 1373
Bse3DI GCAATG 5 cut(s) 149, 414, 872, 923, 1188
BseBI CCWGG 3 cut(s) 488, 623, 1116
BseDI CCNNGG 4 cut(s) 222, 678, 842, 893
BseGI GGATG 2 cut(s) 858, 1519
BseLI CCNNNNNNNGG 2 cut(s) 259, 1031
BseMI GCAATG 5 cut(s) 149, 414, 872, 923, 1188
BseMII CTCAG 6 cut(s) 29, 104, 428, 558, 569, 597
BseNI ACTGG 3 cut(s) 556, 1300, 1373
BseXI GCAGC 3 cut(s) 349, 1025, 1547
BsgI GTGCAG 1 cut(s) 239
Bsh1236I CGCG 2 cut(s) 403, 963
BshFI GGCC 1 cut(s) 174
BshNI GGYRCC 1 cut(s) 983
BsiHKAI GWGCWC 1 cut(s) 288
BsiSI CCGG 1 cut(s) 1028
BslFI GGGAC 1 cut(s) 675
BslI CCNNNNNNNGG 2 cut(s) 259, 1031
BsmAI GTCTC 5 cut(s) 34, 602, 668, 690, 950
BsmFI GGGAC 1 cut(s) 675
BsnI GGCC 1 cut(s) 174
Bso31I GGTCTC 2 cut(s) 602, 668
Bsp1286I GDGCHC 1 cut(s) 288
Bsp143I GATC 9 cut(s) 16, 65, 90, 100, 331, 443, 940, 1357, 1528
Bsp19I CCATGG 1 cut(s) 842
BspACI CCGC 5 cut(s) 484, 803, 963, 1224, 1554
BspANI GGCC 1 cut(s) 174
BspCNI CTCAG 6 cut(s) 30, 105, 427, 557, 570, 598
BspFNI CGCG 2 cut(s) 403, 963
BspHI TCATGA 1 cut(s) 19
BspLI GGNNCC 2 cut(s) 691, 985
BspMAI CTGCAG 1 cut(s) 1126
BspMI ACCTGC 1 cut(s) 643
BspOI GCTAGC 1 cut(s) 567
BspPI GGATC 4 cut(s) 24, 73, 85, 95
BspQI GCTCTTC 1 cut(s) 1140
BspT107I GGYRCC 1 cut(s) 983
BspTNI GGTCTC 2 cut(s) 602, 668
BsrDI GCAATG 5 cut(s) 149, 414, 872, 923, 1188
BsrI ACTGG 3 cut(s) 556, 1300, 1373
BssECI CCNNGG 4 cut(s) 222, 678, 842, 893
BssMI GATC 9 cut(s) 16, 65, 90, 100, 331, 443, 940, 1357, 1528
BssT1I CCWWGG 2 cut(s) 678, 842
Bst2UI CCWGG 3 cut(s) 488, 623, 1116
Bst4CI ACNGT 3 cut(s) 574, 897, 1091
Bst6I CTCTTC 4 cut(s) 50, 112, 948, 1140
BstC8I GCNNGC 4 cut(s) 303, 319, 405, 565
BstDEI CTNAG 7 cut(s) 38, 113, 414, 544, 578, 596, 606
BstDSI CCRYGG 3 cut(s) 222, 842, 893
BstF5I GGATG 2 cut(s) 858, 1519
BstFNI CGCG 2 cut(s) 403, 963
BstH2I RGCGCY 1 cut(s) 247
BstHHI GCGC 1 cut(s) 246
BstKTI GATC 9 cut(s) 19, 68, 93, 103, 334, 446, 943, 1360, 1531
BstMAI GTCTC 5 cut(s) 34, 602, 668, 690, 950
BstMBI GATC 9 cut(s) 16, 65, 90, 100, 331, 443, 940, 1357, 1528
BstMWI GCNNNNNNNGC 5 cut(s) 302, 409, 492, 1063, 1560
BstNI CCWGG 3 cut(s) 488, 623, 1116
BstNSI RCATGY 3 cut(s) 321, 741, 970
BstSCI CCNGG 4 cut(s) 486, 621, 1027, 1114
BstSFI CTRYAG 1 cut(s) 1122
BstUI CGCG 2 cut(s) 403, 963
BstV1I GCAGC 3 cut(s) 349, 1025, 1547
BstV2I GAAGAC 1 cut(s) 1107
BstXI CCANNNNNNTGG 3 cut(s) 229, 849, 900
BsuRI GGCC 1 cut(s) 174
BtgI CCRYGG 3 cut(s) 222, 842, 893
BtgZI GCGATG 1 cut(s) 60
BtsCI GGATG 2 cut(s) 858, 1519
BtsI GCAGTG 1 cut(s) 1131
BtsIMutI CAGTG 5 cut(s) 35, 63, 422, 1131, 1293
BveI ACCTGC 1 cut(s) 643
Cac8I GCNNGC 4 cut(s) 303, 319, 405, 565
CaiI CAGNNNCTG 1 cut(s) 551
CciI TCATGA 1 cut(s) 19
CfoI GCGC 1 cut(s) 246
Cfr13I GGNCC 1 cut(s) 689
CseI GACGC 3 cut(s) 409, 743, 1267
CsiI ACCWGGT 1 cut(s) 621
Csp6I GTAC 5 cut(s) 290, 575, 766, 984, 1366
CviQI GTAC 5 cut(s) 290, 575, 766, 984, 1366
DdeI CTNAG 7 cut(s) 38, 113, 414, 544, 578, 596, 606
DpnI GATC 9 cut(s) 18, 67, 92, 102, 333, 445, 942, 1359, 1530
DpnII GATC 9 cut(s) 16, 65, 90, 100, 331, 443, 940, 1357, 1528
DraIII CACNNNGTG 1 cut(s) 1031
EaeI YGGCCR 1 cut(s) 172
Eam1104I CTCTTC 4 cut(s) 50, 112, 948, 1140
EarI CTCTTC 4 cut(s) 50, 112, 948, 1140
Ecl136II GAGCTC 1 cut(s) 286
Eco130I CCWWGG 2 cut(s) 678, 842
Eco24I GRGCYC 1 cut(s) 288
Eco31I GGTCTC 2 cut(s) 602, 668
Eco32I GATATC 1 cut(s) 993
Eco47I GGWCC 1 cut(s) 689
Eco53kI GAGCTC 1 cut(s) 286
EcoICRI GAGCTC 1 cut(s) 286
EcoRII CCWGG 3 cut(s) 486, 621, 1114
EcoRV GATATC 1 cut(s) 993
EcoT14I CCWWGG 2 cut(s) 678, 842
EcoT22I ATGCAT 1 cut(s) 319
EcoT38I GRGCYC 1 cut(s) 288
ErhI CCWWGG 2 cut(s) 678, 842
FalI AAGNNNNNCTT 2 cut(s) 285, 317
FaqI GGGAC 1 cut(s) 675
FauI CCCGC 1 cut(s) 810
FauNDI CATATG 1 cut(s) 1538
FbaI TGATCA 1 cut(s) 1528
Fnu4HI GCNGC 4 cut(s) 363, 964, 1014, 1561
FokI GGATG 2 cut(s) 865, 1526
FriOI GRGCYC 1 cut(s) 288
Fsp4HI GCNGC 4 cut(s) 363, 964, 1014, 1561
FspBI CTAG 3 cut(s) 564, 710, 1310
GlaI GCGC 1 cut(s) 245
GluI GCNGC 4 cut(s) 363, 964, 1014, 1561
HaeII RGCGCY 1 cut(s) 247
HaeIII GGCC 1 cut(s) 174
HapII CCGG 1 cut(s) 1028
HgaI GACGC 3 cut(s) 409, 743, 1267
HhaI GCGC 1 cut(s) 246
Hin6I GCGC 1 cut(s) 244
HinP1I GCGC 1 cut(s) 244
HindIII AAGCTT 1 cut(s) 294
HinfI GANTC 5 cut(s) 42, 233, 345, 649, 837
HpaII CCGG 1 cut(s) 1028
HphI GGTGA 4 cut(s) 240, 773, 791, 1339
Hpy166II GTNNAC 3 cut(s) 658, 1321, 1465
Hpy188I TCNGA 3 cut(s) 129, 1236, 1478
Hpy188III TCNNGA 9 cut(s) 20, 112, 311, 335, 437, 447, 546, 1355, 1462
Hpy8I GTNNAC 3 cut(s) 658, 1321, 1465
HpyAV CCTTC 2 cut(s) 56, 266
HpyCH4III ACNGT 3 cut(s) 574, 897, 1091
HpyF10VI GCNNNNNNNGC 5 cut(s) 302, 409, 492, 1063, 1560
HpyF3I CTNAG 7 cut(s) 38, 113, 414, 544, 578, 596, 606
HspAI GCGC 1 cut(s) 244
KpnI GGTACC 1 cut(s) 987
Ksp22I TGATCA 1 cut(s) 1528
Kzo9I GATC 9 cut(s) 16, 65, 90, 100, 331, 443, 940, 1357, 1528
LguI GCTCTTC 1 cut(s) 1140
LmnI GCTCC 3 cut(s) 283, 394, 894
Lsp1109I GCAGC 3 cut(s) 349, 1025, 1547
LweI GCATC 5 cut(s) 62, 304, 472, 582, 1320
MabI ACCWGGT 1 cut(s) 621
MaeI CTAG 3 cut(s) 564, 710, 1310
MaeIII GTNAC 3 cut(s) 829, 1204, 1279
MalI GATC 9 cut(s) 18, 67, 92, 102, 333, 445, 942, 1359, 1530
MboI GATC 9 cut(s) 16, 65, 90, 100, 331, 443, 940, 1357, 1528
MboII GAAGA 8 cut(s) 37, 129, 916, 965, 1112, 1157, 1465, 1558
MhlI GDGCHC 1 cut(s) 288
MlsI TGGCCA 1 cut(s) 174
MluCI AATT 7 cut(s) 69, 182, 501, 714, 857, 908, 1532
MluI ACGCGT 1 cut(s) 401
MluNI TGGCCA 1 cut(s) 174
MlyI GAGTC 3 cut(s) 36, 227, 831
MmeI TCCRAC 1 cut(s) 210
Mox20I TGGCCA 1 cut(s) 174
Mph1103I ATGCAT 1 cut(s) 319
MroXI GAANNNNTTC 1 cut(s) 121
MscI TGGCCA 1 cut(s) 174
MseI TTAA 3 cut(s) 860, 911, 1167
MslI CAYNNNNRTG 4 cut(s) 468, 847, 971, 1328
Msp20I TGGCCA 1 cut(s) 174
MspA1I CMGCKG 1 cut(s) 1224
MspI CCGG 1 cut(s) 1028
MspR9I CCNGG 4 cut(s) 488, 623, 1029, 1116
MvaI CCWGG 3 cut(s) 488, 623, 1116
MvnI CGCG 2 cut(s) 403, 963
MwoI GCNNNNNNNGC 5 cut(s) 302, 409, 492, 1063, 1560
NciI CCSGG 1 cut(s) 1029
NcoI CCATGG 1 cut(s) 842
NdeI CATATG 1 cut(s) 1538
NdeII GATC 9 cut(s) 16, 65, 90, 100, 331, 443, 940, 1357, 1528
NheI GCTAGC 1 cut(s) 563
NlaIV GGNNCC 2 cut(s) 691, 985
NmuCI GTSAC 1 cut(s) 1279
NsiI ATGCAT 1 cut(s) 319
NspI RCATGY 3 cut(s) 321, 741, 970
PaeI GCATGC 1 cut(s) 321
PagI TCATGA 1 cut(s) 19
PciSI GCTCTTC 1 cut(s) 1140
PdmI GAANNNNTTC 1 cut(s) 121
PfeI GAWTC 2 cut(s) 345, 649
PflMI CCANNNNNTGG 1 cut(s) 1031
PfoI TCCNGGA 1 cut(s) 1114
PkrI GCNGC 4 cut(s) 364, 965, 1015, 1562
PleI GAGTC 3 cut(s) 36, 227, 831
PpsI GAGTC 3 cut(s) 36, 227, 831
PshBI ATTAAT 2 cut(s) 860, 911
Psp124BI GAGCTC 1 cut(s) 288
Psp6I CCWGG 3 cut(s) 486, 621, 1114
PspGI CCWGG 3 cut(s) 486, 621, 1114
PspN4I GGNNCC 2 cut(s) 691, 985
PspPI GGNCC 1 cut(s) 689
PstI CTGCAG 1 cut(s) 1126
PstNI CAGNNNCTG 1 cut(s) 551
RsaI GTAC 5 cut(s) 291, 576, 767, 985, 1367
RsaNI GTAC 5 cut(s) 290, 575, 766, 984, 1366
RseI CAYNNNNRTG 4 cut(s) 468, 847, 971, 1328
SacI GAGCTC 1 cut(s) 288
SapI GCTCTTC 1 cut(s) 1140
SaqAI TTAA 3 cut(s) 860, 911, 1167
SatI GCNGC 4 cut(s) 363, 964, 1014, 1561
Sau3AI GATC 9 cut(s) 16, 65, 90, 100, 331, 443, 940, 1357, 1528
Sau96I GGNCC 1 cut(s) 689
ScaI AGTACT 1 cut(s) 576
SchI GAGTC 3 cut(s) 36, 227, 831
ScrFI CCNGG 4 cut(s) 488, 623, 1029, 1116
SduI GDGCHC 1 cut(s) 288
SexAI ACCWGGT 1 cut(s) 621
SfaNI GCATC 5 cut(s) 62, 304, 472, 582, 1320
SfcI CTRYAG 1 cut(s) 1122
SinI GGWCC 1 cut(s) 689
SmiMI CAYNNNNRTG 4 cut(s) 468, 847, 971, 1328
SphI GCATGC 1 cut(s) 321
Sse9I AATT 7 cut(s) 69, 182, 501, 714, 857, 908, 1532
SsiI CCGC 5 cut(s) 484, 803, 963, 1224, 1554
SspMI CTAG 3 cut(s) 564, 710, 1310
SstI GAGCTC 1 cut(s) 288
StyD4I CCNGG 4 cut(s) 486, 621, 1027, 1114
StyI CCWWGG 2 cut(s) 678, 842
TaaI ACNGT 3 cut(s) 574, 897, 1091
TaqI TCGA 2 cut(s) 1243, 1523
TasI AATT 7 cut(s) 69, 182, 501, 714, 857, 908, 1532
TatI WGTACW 1 cut(s) 574
TauI GCSGC 1 cut(s) 966
TfiI GAWTC 2 cut(s) 345, 649
Tru1I TTAA 3 cut(s) 860, 911, 1167
Tru9I TTAA 3 cut(s) 860, 911, 1167
TscAI CASTG 5 cut(s) 42, 63, 422, 1131, 1300
TseFI GTSAC 1 cut(s) 1279
TseI GCWGC 3 cut(s) 362, 1013, 1560
Tsp45I GTSAC 1 cut(s) 1279
TspDTI ATGAA 7 cut(s) 63, 869, 1034, 1153, 1177, 1412, 1525
TspGWI ACGGA 1 cut(s) 239
TspRI CASTG 5 cut(s) 42, 63, 422, 1131, 1300
Van91I CCANNNNNTGG 1 cut(s) 1031
VpaK11BI GGWCC 1 cut(s) 689
VspI ATTAAT 2 cut(s) 860, 911
XapI RAATTY 3 cut(s) 182, 501, 714
XceI RCATGY 3 cut(s) 321, 741, 970
XcmI CCANNNNNNNNNTGG 1 cut(s) 619
XmnI GAANNNNTTC 1 cut(s) 121
XspI CTAG 3 cut(s) 564, 710, 1310
ZrmI AGTACT 1 cut(s) 576
Zsp2I ATGCAT 1 cut(s) 319
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.