Rh3AG292800

ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3A
OG0000404
Physical Location & Seq
Forward (+)
35425634 .. 35427745
2112 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3AG292800.1

Sequence Viewer

Length: 1500 bp
ATGGAGATTACAGAAGATCACCATGAAGACGATACAACAAGATCACTCTATGAGGCAGCAGTTGCAGGCTCCGTATCATCTTTGATAAGACTGATCCAGAAAGACCCTCTCATCCTCAACAAAGTTTCACTCACTCACTTCAGCGAAACTCCGCTTCACATCTCAGCTTTGCTCGGCCACCTTGATTTTACCAAAGCTCTTCTTATTCATAATTCGAGACTTGCCCGGGTGAGGGACTCCTTGAGACGCCCTCCGCTCCTCTTGGCATCTGCTGAGGGCCATAAGGAGACGGTCGAAGCTCTTCTGAAAGCCTACCCCGACGCTTGCTTGTTTCGGGATCAAGATGGTAGAGTTCCTCTTCACTACGCCGCAATGAGAGGACATGCTGAGGTTTTAGCTCAGCTGATATGCGCAAAGCCCGAATCGGTCACATTAAGGGTTCTTGATAGAGGAGACACGGTTTTCCACTTGTGTGTTACATATAACCAATTAGAATGCTTGAAGCTATTGGTGGAGGAAGTAGGAGACAATAATAGAGACGTCCTCAGTGCTAGAGCTGGTTGTGATGGTGGTATAACCATTCTTGAGTTAGCTGTGATGCTAAGGCAAATTGAGACCCTAAGATACTTGCTTTCGCTACCTGTTGTATGGTCAGAAGCAAATGTTGTGCATGGGAAGGTATTAAACATTGTTGAAAATATGCCAAAAGACTTCGTAAGCTTGGAAATTCAACGAGTTTTGATGGATTCTGGTATAATAAGGAATGGAAGGAATGAAAATGAGCAACAACCACTAGTACCAAACAACAAATCAAAGAAAGAAGGGAAAAAGGGAAGGAAAAGTACAAAAAACGTAAATGAGAAACGCAGTAGTAAGAGTGGGAATTGGGTGGAAGAGAAACGCGGCATGCTCATGGTTGTGGCTACCATGATCTCAACAATGACATTCCAAGCTGCAATTAACCCACCAGGTGGTTTTTGGCAAGAAATCAATACCAATACGGCTTTTGGTGGAGTATCTTATTGCAATGACACAAACCCATGTTTCGTCGGAACTGCAGTGTCAAGCTACATTCATCCAGATTTATACATTAACTTCCAGACTGCCGATACTATCTGCTTCCTTTTCTCCTTGAGCATCACTCTTTTGCTTATAAGGGGATTTCCTCTCCATAAACGAGTGCTTGTGTGGCTCTTATCAGTAGTCATGTGTCTCACACTCACATTCTTGACATTGACCTTCAATGCAGGCATAAAGATGGTAATACCCAAACGTGTTGATAATGAAGATCTTAGGAGTCCCGTGGTTATTGGTTCTGCAACATTGTTTTGGGGTCCAATGCTTGGACTGGTGGTTTTATACCAGACTATTCGACTTCTCGTTTGGCTGGTCAAGAAGTTGTGGCGCCTAGTCTACCCCAAAAATAAGATGACGAGCAACAGCAACGCAAATCTACTCCAGACTCCCATAAACTCTCATGAGATCAGTTCGTACGTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Ank_2 Ank_3 Ank_4 PGG

Protein Analysis

499

Amino Acids

55.87

Weight (kDa)

8.73

Isoelectric Point (pI)

40.46

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 16 - 105 1.3e-08 Ankyrin repeats (3 copies)
Ank_2 PF12796 120 - 212 1.4e-10 Ankyrin repeats (3 copies)
PGG PF13962 295 - 420 1.3e-17 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000404)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G13950 AT4G13266
fragaria_vesca FvH4_7g06240 FvH4_7g06250 FvH4_7g06270
malus_domestica MD12G1213300.v1.1 MD12G1213900.v1.1 MD12G1214100.v1.1 MD12G1214700.v1.1 MD12G1214800.v1.1
prunus_persica Prupe.2G107700_v2.0.a1 Prupe.3G142200_v2.0.a1 Prupe.3G154100_v2.0.a1 Prupe.3G154300_v2.0.a1 Prupe.3G154900_v2.0.a1 Prupe.3G155100_v2.0.a1
pyrus_communis pycom12g20010 pycom12g20080 pycom12g20090 pycom12g20100
rosa_chinensis RchiOBHm_Chr1g0341001 RchiOBHm_Chr1g0341021 RchiOBHm_Chr1g0341891 RchiOBHm_Chr1g0342341 RchiOBHm_Chr3g0490431
rosa_laevigata RLG00000022889 RLG00000029016 RLG00000029039 RLG00000029059 RLG00000029061 RLG00000029065 RLG00000029115 RLG00000029155 RLG00000033311 RLG00000033312
rosa_multiflora Rmu_sc0000404.1_g000006 Rmu_sc0001836.1_g000015 Rmu_sc0001836.1_g000050 Rmu_sc0002200.1_g000003 Rmu_sc0003862.1_g000020 Rmu_sc0005193.1_g000001 Rmu_sc0005193.1_g000002 Rmu_sc0008453.1_g000008 Rmu_sc0008453.1_g000009 Rmu_sc0008453.1_g000010 Rmu_sc0008862.1_g000001 Rmu_sc0011195.1_g000003 Rmu_sc0014077.1_g000001
rosa_roxburghii Rroxscaffold_4G00311670 Rroxscaffold_4G00311730 Rroxscaffold_4G00311750 Rroxscaffold_4G00312290 Rroxscaffold_6G00393430
rosa_rugosa Rorug01G0153800.1 Rorug01G0153900.1 Rorug01G0160100.1 Rorug03G0243800
rosa_samantha Rh1AG166400 Rh1AG168200 Rh1AG174100 Rh1AG174700 Rh1AG179000 Rh1BG132600 Rh1BG136500 Rh1BG142200 Rh1BG142800 Rh1BG143200 Rh1BG146200 Rh1BG147000 Rh1BG147100 Rh1CG154800 Rh1CG161900 Rh1CG162700 Rh1CG166000 Rh1DG167500 Rh1DG169900 Rh1DG174000 Rh1DG174400 Rh1DG174700 Rh1DG174800 Rh1DG178200 Rh1DG179000 Rh1DG179100 Rh3AG292800 Rh3BG329600 Rh3CG326900 Rh3DG326200 Rh5BG218300 Rh7CG326800 Rh7DG307100
rosa_wichuraiana Rw0G006190 Rw0G007830 Rw0G009970 Rw0G009980 Rw1G013880 Rw1G014000 Rw1G014500 Rw1G014560 Rw1G014920 Rw3G025950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1154
AatII GACGTC 1 cut(s) 543
Acc16I TGCGCA 1 cut(s) 412
AccB1I GGYRCC 1 cut(s) 1404
AccB7I CCANNNNNTGG 2 cut(s) 971, 1343
AccBSI CCGCTC 1 cut(s) 256
AccI GTMKAC 1 cut(s) 1413
AccII CGCG 1 cut(s) 903
AciI CCGC 4 cut(s) 152, 254, 369, 903
AclWI GGATC 2 cut(s) 88, 345
AcoI YGGCCR 1 cut(s) 175
AcsI RAATTY 1 cut(s) 726
AcuI CTGAAG 1 cut(s) 124
AcyI GRCGYC 3 cut(s) 247, 540, 1405
AdeI CACNNNGTG 1 cut(s) 971
AfaI GTAC 3 cut(s) 798, 844, 1493
AfiI CCNNNNNNNGG 4 cut(s) 231, 232, 971, 1343
AflIII ACRYGT 1 cut(s) 1273
AgsI TTSAA 4 cut(s) 502, 695, 731, 1243
AhlI ACTAGT 1 cut(s) 793
AjnI CCWGG 1 cut(s) 967
AleI CACNNNNGTG 1 cut(s) 471
Alw26I GTCTC 8 cut(s) 211, 238, 281, 447, 519, 531, 608, 1217
AlwI GGATC 2 cut(s) 88, 345
Ama87I CYCGRG 1 cut(s) 225
AoxI GGCC 2 cut(s) 175, 277
ApeKI GCWGC 2 cut(s) 56, 953
ApoI RAATTY 1 cut(s) 726
ArsI GACNNNNNNTTYG 2 cut(s) 1365, 1397
Asp700I GAANNNNTTC 1 cut(s) 300
AspLEI GCGC 2 cut(s) 413, 1407
AspS9I GGNCC 2 cut(s) 277, 1334
AsuC2I CCSGG 2 cut(s) 226, 227
AsuHPI GGTGA 2 cut(s) 11, 241
AvaI CYCGRG 1 cut(s) 225
AvaII GGWCC 1 cut(s) 1334
BanI GGYRCC 1 cut(s) 1404
BarI GAAGNNNNNNTAC 2 cut(s) 826, 858
BbsI GAAGAC 1 cut(s) 33
BbvCI CCTCAGC 2 cut(s) 273, 387
BbvI GCAGC 2 cut(s) 68, 940
BccI CCATC 4 cut(s) 338, 560, 736, 1252
BceAI ACGGC 1 cut(s) 1017
BciT130I CCWGG 1 cut(s) 969
BcnI CCSGG 2 cut(s) 226, 227
BcoDI GTCTC 8 cut(s) 211, 238, 281, 447, 519, 531, 608, 1217
BcuI ACTAGT 1 cut(s) 793
BfaI CTAG 3 cut(s) 552, 794, 1409
BfmI CTRYAG 1 cut(s) 1056
BfoI RGCGCY 1 cut(s) 1408
BglII AGATCT 1 cut(s) 1288
BisI GCNGC 4 cut(s) 57, 369, 904, 954
BlpI GCTNAGC 1 cut(s) 399
BlsI GCNGC 4 cut(s) 58, 370, 905, 955
Bme1390I CCNGG 3 cut(s) 226, 227, 969
Bme18I GGWCC 1 cut(s) 1334
BmeT110I CYCGRG 1 cut(s) 225
BmgT120I GGNCC 2 cut(s) 277, 1334
BmiI GGNNCC 3 cut(s) 70, 1335, 1406
BmrFI CCNGG 3 cut(s) 226, 227, 969
BmsI GCATC 3 cut(s) 275, 588, 1146
BpiI GAAGAC 1 cut(s) 33
BplI GAGNNNNNCTC 6 cut(s) 235, 267, 528, 560, 1126, 1158
BpmI CTGGAG 1 cut(s) 1442
Bpu10I CCTNAGC 3 cut(s) 273, 387, 602
Bpu1102I GCTNAGC 1 cut(s) 399
BpuEI CTTGAG 3 cut(s) 262, 605, 1153
BpuMI CCSGG 2 cut(s) 226, 227
BsaHI GRCGYC 3 cut(s) 247, 540, 1405
BsaI GGTCTC 1 cut(s) 608
BsaJI CCNNGG 2 cut(s) 225, 1302
BsaXI ACNNNNNCTCC 2 cut(s) 444, 474
Bsc4I CCNNNNNNNGG 4 cut(s) 231, 232, 971, 1343
Bse1I ACTGG 1 cut(s) 1353
Bse3DI GCAATG 2 cut(s) 378, 1033
BseBI CCWGG 1 cut(s) 969
BseDI CCNNGG 2 cut(s) 225, 1302
BseGI GGATG 2 cut(s) 111, 1075
BseLI CCNNNNNNNGG 4 cut(s) 231, 232, 971, 1343
BseMI GCAATG 2 cut(s) 378, 1033
BseMII CTCAG 5 cut(s) 177, 264, 378, 413, 559
BseNI ACTGG 1 cut(s) 1353
BseRI GAGGAG 2 cut(s) 248, 465
BseXI GCAGC 2 cut(s) 68, 940
Bsh1236I CGCG 1 cut(s) 903
Bsh1285I CGRYCG 1 cut(s) 294
BshFI GGCC 2 cut(s) 177, 279
BshNI GGYRCC 1 cut(s) 1404
BsiEI CGRYCG 1 cut(s) 294
BsiHKCI CYCGRG 1 cut(s) 225
BsiSI CCGG 1 cut(s) 226
BsiWI CGTACG 1 cut(s) 1491
BslFI GGGAC 2 cut(s) 248, 1284
BslI CCNNNNNNNGG 4 cut(s) 231, 232, 971, 1343
BsmAI GTCTC 8 cut(s) 211, 238, 281, 447, 519, 531, 608, 1217
BsmBI CGTCTC 3 cut(s) 238, 281, 531
BsmFI GGGAC 2 cut(s) 248, 1284
BsmI GAATGC 1 cut(s) 500
BsnI GGCC 2 cut(s) 177, 279
Bso31I GGTCTC 1 cut(s) 608
BsoBI CYCGRG 1 cut(s) 225
Bsp143I GATC 7 cut(s) 16, 41, 93, 337, 930, 1288, 1482
Bsp1720I GCTNAGC 1 cut(s) 399
BspACI CCGC 4 cut(s) 152, 254, 369, 903
BspANI GGCC 2 cut(s) 177, 279
BspCNI CTCAG 5 cut(s) 176, 265, 379, 412, 558
BspFNI CGCG 1 cut(s) 903
BspHI TCATGA 1 cut(s) 1477
BspLI GGNNCC 3 cut(s) 70, 1335, 1406
BspMAI CTGCAG 1 cut(s) 1060
BspPI GGATC 2 cut(s) 88, 345
BspQI GCTCTTC 2 cut(s) 204, 306
BspT107I GGYRCC 1 cut(s) 1404
BspTNI GGTCTC 1 cut(s) 608
BsrBI CCGCTC 1 cut(s) 256
BsrDI GCAATG 2 cut(s) 378, 1033
BsrI ACTGG 1 cut(s) 1353
BssECI CCNNGG 2 cut(s) 225, 1302
BssMI GATC 7 cut(s) 16, 41, 93, 337, 930, 1288, 1482
BssNI GRCGYC 3 cut(s) 247, 540, 1405
Bst2UI CCWGG 1 cut(s) 969
Bst4CI ACNGT 2 cut(s) 292, 460
Bst6I CTCTTC 4 cut(s) 204, 306, 363, 888
BstACI GRCGYC 3 cut(s) 247, 540, 1405
BstAPI GCANNNNNTGC 1 cut(s) 62
BstC8I GCNNGC 4 cut(s) 67, 325, 908, 1249
BstDEI CTNAG 8 cut(s) 163, 273, 387, 399, 545, 602, 620, 1292
BstDSI CCRYGG 1 cut(s) 1302
BstF5I GGATG 2 cut(s) 111, 1075
BstFNI CGCG 1 cut(s) 903
BstH2I RGCGCY 1 cut(s) 1408
BstHHI GCGC 2 cut(s) 413, 1407
BstKTI GATC 7 cut(s) 19, 44, 96, 340, 933, 1291, 1485
BstMAI GTCTC 8 cut(s) 211, 238, 281, 447, 519, 531, 608, 1217
BstMBI GATC 7 cut(s) 16, 41, 93, 337, 930, 1288, 1482
BstMCI CGRYCG 1 cut(s) 294
BstMWI GCNNNNNNNGC 2 cut(s) 62, 1189
BstNI CCWGG 1 cut(s) 969
BstNSI RCATGY 2 cut(s) 386, 910
BstSCI CCNGG 3 cut(s) 224, 225, 967
BstSFI CTRYAG 1 cut(s) 1056
BstUI CGCG 1 cut(s) 903
BstV1I GCAGC 2 cut(s) 68, 940
BstV2I GAAGAC 1 cut(s) 33
BstX2I RGATCY 1 cut(s) 1288
BstYI RGATCY 1 cut(s) 1288
BsuRI GGCC 2 cut(s) 177, 279
BtgI CCRYGG 1 cut(s) 1302
BtsCI GGATG 2 cut(s) 111, 1075
BtsI GCAGTG 1 cut(s) 1065
BtsIMutI CAGTG 2 cut(s) 553, 1065
Cac8I GCNNGC 4 cut(s) 67, 325, 908, 1249
CciI TCATGA 1 cut(s) 1477
CfoI GCGC 2 cut(s) 413, 1407
Cfr13I GGNCC 2 cut(s) 277, 1334
Cfr9I CCCGGG 1 cut(s) 225
CseI GACGC 2 cut(s) 255, 329
CsiI ACCWGGT 1 cut(s) 967
Csp6I GTAC 3 cut(s) 797, 843, 1492
CviAII CATG 9 cut(s) 23, 383, 671, 907, 913, 928, 1041, 1207, 1478
CviQI GTAC 3 cut(s) 797, 843, 1492
DdeI CTNAG 8 cut(s) 163, 273, 387, 399, 545, 602, 620, 1292
DinI GGCGCC 1 cut(s) 1406
DpnI GATC 7 cut(s) 18, 43, 95, 339, 932, 1290, 1484
DpnII GATC 7 cut(s) 16, 41, 93, 337, 930, 1288, 1482
DraIII CACNNNGTG 1 cut(s) 971
EaeI YGGCCR 1 cut(s) 175
Eam1104I CTCTTC 4 cut(s) 204, 306, 363, 888
EarI CTCTTC 4 cut(s) 204, 306, 363, 888
Eco31I GGTCTC 1 cut(s) 608
Eco47I GGWCC 1 cut(s) 1334
Eco57I CTGAAG 1 cut(s) 124
Eco88I CYCGRG 1 cut(s) 225
EcoRII CCWGG 1 cut(s) 967
EgeI GGCGCC 1 cut(s) 1406
EheI GGCGCC 1 cut(s) 1406
Esp3I CGTCTC 3 cut(s) 238, 281, 531
FaeI CATG 9 cut(s) 26, 386, 674, 910, 916, 931, 1044, 1210, 1481
FalI AAGNNNNNCTT 2 cut(s) 186, 218
FaqI GGGAC 2 cut(s) 248, 1284
FatI CATG 9 cut(s) 22, 382, 670, 906, 912, 927, 1040, 1206, 1477
FblI GTMKAC 1 cut(s) 1413
Fnu4HI GCNGC 4 cut(s) 57, 369, 904, 954
FokI GGATG 2 cut(s) 98, 1062
Fsp4HI GCNGC 4 cut(s) 57, 369, 904, 954
FspBI CTAG 3 cut(s) 552, 794, 1409
FspI TGCGCA 1 cut(s) 412
GlaI GCGC 2 cut(s) 412, 1406
GluI GCNGC 4 cut(s) 57, 369, 904, 954
GsuI CTGGAG 1 cut(s) 1442
HaeII RGCGCY 1 cut(s) 1408
HaeIII GGCC 2 cut(s) 177, 279
HapII CCGG 1 cut(s) 226
HgaI GACGC 2 cut(s) 255, 329
HhaI GCGC 2 cut(s) 413, 1407
Hin1I GRCGYC 3 cut(s) 247, 540, 1405
Hin1II CATG 9 cut(s) 26, 386, 674, 910, 916, 931, 1044, 1210, 1481
Hin6I GCGC 2 cut(s) 411, 1405
HinP1I GCGC 2 cut(s) 411, 1405
HindIII AAGCTT 1 cut(s) 718
HinfI GANTC 5 cut(s) 236, 422, 746, 1297, 1462
HpaII CCGG 1 cut(s) 226
HphI GGTGA 2 cut(s) 11, 241
Hpy166II GTNNAC 1 cut(s) 1414
Hpy188I TCNGA 3 cut(s) 306, 655, 1052
Hpy8I GTNNAC 1 cut(s) 1414
Hpy99I CGWCG 2 cut(s) 323, 1052
HpyAV CCTTC 5 cut(s) 670, 762, 815, 828, 1249
HpyCH4III ACNGT 2 cut(s) 292, 460
HpyCH4IV ACGT 4 cut(s) 540, 852, 1273, 1494
HpyCH4V TGCA 7 cut(s) 65, 670, 956, 1026, 1058, 1247, 1319
HpyF10VI GCNNNNNNNGC 2 cut(s) 62, 1189
HpyF3I CTNAG 8 cut(s) 163, 273, 387, 399, 545, 602, 620, 1292
HpySE526I ACGT 4 cut(s) 540, 852, 1273, 1494
Hsp92I GRCGYC 3 cut(s) 247, 540, 1405
Hsp92II CATG 9 cut(s) 26, 386, 674, 910, 916, 931, 1044, 1210, 1481
HspAI GCGC 2 cut(s) 411, 1405
KasI GGCGCC 1 cut(s) 1404
Kzo9I GATC 7 cut(s) 16, 41, 93, 337, 930, 1288, 1482
LguI GCTCTTC 2 cut(s) 204, 306
LmnI GCTCC 2 cut(s) 74, 261
Lsp1109I GCAGC 2 cut(s) 68, 940
LweI GCATC 3 cut(s) 275, 588, 1146
MabI ACCWGGT 1 cut(s) 967
MaeI CTAG 3 cut(s) 552, 794, 1409
MaeII ACGT 4 cut(s) 540, 852, 1273, 1494
MaeIII GTNAC 2 cut(s) 427, 475
MalI GATC 7 cut(s) 18, 43, 95, 339, 932, 1290, 1484
MbiI CCGCTC 1 cut(s) 256
MboI GATC 7 cut(s) 16, 41, 93, 337, 930, 1288, 1482
MboII GAAGA 7 cut(s) 26, 38, 191, 293, 350, 905, 1298
MflI RGATCY 1 cut(s) 1288
MluCI AATT 6 cut(s) 211, 488, 609, 726, 883, 957
Mly113I GGCGCC 1 cut(s) 1405
MlyI GAGTC 3 cut(s) 230, 1306, 1456
MmeI TCCRAC 1 cut(s) 1030
MroXI GAANNNNTTC 1 cut(s) 300
MseI TTAA 4 cut(s) 434, 683, 960, 1092
MslI CAYNNNNRTG 4 cut(s) 471, 911, 917, 1256
MspA1I CMGCKG 1 cut(s) 403
MspI CCGG 1 cut(s) 226
MspR9I CCNGG 3 cut(s) 226, 227, 969
Mva1269I GAATGC 1 cut(s) 500
MvaI CCWGG 1 cut(s) 969
MvnI CGCG 1 cut(s) 903
MwoI GCNNNNNNNGC 2 cut(s) 62, 1189
NarI GGCGCC 1 cut(s) 1405
NciI CCSGG 2 cut(s) 226, 227
NdeII GATC 7 cut(s) 16, 41, 93, 337, 930, 1288, 1482
NlaIII CATG 9 cut(s) 26, 386, 674, 910, 916, 931, 1044, 1210, 1481
NlaIV GGNNCC 3 cut(s) 70, 1335, 1406
NmeAIII GCCGAG 1 cut(s) 153
NmuCI GTSAC 1 cut(s) 427
NsbI TGCGCA 1 cut(s) 412
NspI RCATGY 2 cut(s) 386, 910
OliI CACNNNNGTG 1 cut(s) 471
PaeI GCATGC 1 cut(s) 910
PagI TCATGA 1 cut(s) 1477
PciSI GCTCTTC 2 cut(s) 204, 306
PctI GAATGC 1 cut(s) 500
PdmI GAANNNNTTC 1 cut(s) 300
PfeI GAWTC 2 cut(s) 422, 746
Pfl23II CGTACG 1 cut(s) 1491
PflMI CCANNNNNTGG 2 cut(s) 971, 1343
PkrI GCNGC 4 cut(s) 58, 370, 905, 955
PleI GAGTC 3 cut(s) 230, 1305, 1456
PluTI GGCGCC 1 cut(s) 1408
PpsI GAGTC 3 cut(s) 230, 1305, 1456
PsiI TTATAA 1 cut(s) 1154
Psp6I CCWGG 1 cut(s) 967
PspGI CCWGG 1 cut(s) 967
PspLI CGTACG 1 cut(s) 1491
PspN4I GGNNCC 3 cut(s) 70, 1335, 1406
PspPI GGNCC 2 cut(s) 277, 1334
PstI CTGCAG 1 cut(s) 1060
PsuI RGATCY 1 cut(s) 1288
PvuII CAGCTG 1 cut(s) 403
RsaI GTAC 3 cut(s) 798, 844, 1493
RsaNI GTAC 3 cut(s) 797, 843, 1492
RseI CAYNNNNRTG 4 cut(s) 471, 911, 917, 1256
SapI GCTCTTC 2 cut(s) 204, 306
SaqAI TTAA 4 cut(s) 434, 683, 960, 1092
SatI GCNGC 4 cut(s) 57, 369, 904, 954
Sau3AI GATC 7 cut(s) 16, 41, 93, 337, 930, 1288, 1482
Sau96I GGNCC 2 cut(s) 277, 1334
SchI GAGTC 3 cut(s) 230, 1306, 1456
ScrFI CCNGG 3 cut(s) 226, 227, 969
SexAI ACCWGGT 1 cut(s) 967
SfaNI GCATC 3 cut(s) 275, 588, 1146
SfcI CTRYAG 1 cut(s) 1056
SfoI GGCGCC 1 cut(s) 1406
SinI GGWCC 1 cut(s) 1334
SmaI CCCGGG 1 cut(s) 227
SmiMI CAYNNNNRTG 4 cut(s) 471, 911, 917, 1256
SmlI CTYRAG 3 cut(s) 241, 584, 1132
SmoI CTYRAG 3 cut(s) 241, 584, 1132
SpeI ACTAGT 1 cut(s) 793
SphI GCATGC 1 cut(s) 910
Sse9I AATT 6 cut(s) 211, 488, 609, 726, 883, 957
SsiI CCGC 4 cut(s) 152, 254, 369, 903
SspDI GGCGCC 1 cut(s) 1404
SspMI CTAG 3 cut(s) 552, 794, 1409
StyD4I CCNGG 3 cut(s) 224, 225, 967
TaaI ACNGT 2 cut(s) 292, 460
TaiI ACGT 4 cut(s) 543, 855, 1276, 1497
TaqI TCGA 3 cut(s) 215, 294, 1372
TaqII GACCGA 1 cut(s) 415
TasI AATT 6 cut(s) 211, 488, 609, 726, 883, 957
TatI WGTACW 1 cut(s) 842
TauI GCSGC 2 cut(s) 371, 906
TfiI GAWTC 2 cut(s) 422, 746
Tru1I TTAA 4 cut(s) 434, 683, 960, 1092
Tru9I TTAA 4 cut(s) 434, 683, 960, 1092
TscAI CASTG 2 cut(s) 553, 1065
TseFI GTSAC 1 cut(s) 427
TseI GCWGC 2 cut(s) 56, 953
Tsp45I GTSAC 1 cut(s) 427
TspDTI ATGAA 5 cut(s) 39, 197, 789, 1064, 1299
TspGWI ACGGA 1 cut(s) 61
TspMI CCCGGG 1 cut(s) 225
TspRI CASTG 2 cut(s) 553, 1065
Van91I CCANNNNNTGG 2 cut(s) 971, 1343
VpaK11BI GGWCC 1 cut(s) 1334
XapI RAATTY 1 cut(s) 726
XceI RCATGY 2 cut(s) 386, 910
XcmI CCANNNNNNNNNTGG 1 cut(s) 975
XmaI CCCGGG 1 cut(s) 225
XmiI GTMKAC 1 cut(s) 1413
XmnI GAANNNNTTC 1 cut(s) 300
XspI CTAG 3 cut(s) 552, 794, 1409
ZraI GACGTC 1 cut(s) 541
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.