Rh3DG326200

ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3D
OG0000404
Physical Location & Seq
Forward (+)
35773997 .. 35775802
1806 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3DG326200.1

Sequence Viewer

Length: 1497 bp
ATGGAGATTAGAGAAGATCACCCTGAAGACGATACAACAAGAGCACTCTATGAGGCAGCAGTTGCAGGCTCCGTATCATCTTTGGTAAGATTGATCCAGAAAGACCCTCTCATCCTCAACAAAGTTTCACTCACTCACTTTAGCGAAACTCCGCTCCACATCTCAGCTTTGCTCGGCCACCTTGATTTTACCAAAGCTCTTCTTATTCATAACTCGAGACTTGCGCGGGTGAGGGACTCCTTGAGACGCCCTCCGCTCCTCTTGGCATCTGCTGAAGGCCATAAGGAGACGGTCGAAGCTCTTCTGAAAGCCTACCCCGACGCTTGCTTGTTTCGGGATCAAGATGGTAGAGTTCCTCTTCACTACGCCGCAATGAGAGGACATGCTGAGGTTTTAGCTCAGCTGATGTGCGCAAAGCCCGAATCGGTCACATTAAGGGTTCTTGATAGAGGAGACACGGTTTTCCACTTATGTGTTACATATAACCAATTAGAATGCTTGAAGCTATTGGTGGAGGAAGTAGGAGACAATAATAGAGACGTCCTCAGTGCTAGAGCTGGTTGTGATGGTGGTATAACCATTCTTGAGTTAGCTGTGATGCTAAGGCAAATTGAGACCATAAGATACTTGCTTTCGCTACCTGTTGTACGGTCAGAAGCAAATGTTGTACATGGGAAGGTATTAAACATTGTAGAAAATATGCCAAAAGACTTCGTAAGCTTGGAAATTCAACGAGTTTTGATAGATTCTGGTATAATAAGGAATGGAAGTAATGAAAATGAGCAACAACCACTAGTACCAAACAACAAATCAAAGAAAGAAGGAAAAAAGGGAAGGAAAAGTACCAAAAAGGTAAATGAGAAACGCAGTAAGAGTGGGAATTGGGTGGAAGAGAAACGCGGCATGCTCATGGTTGTGGCTACCATGATCTCAACAATGACATTCCAAGCTGCAATTAACCCACCAGGTGGTTTTTGGCAAGAAATCAACACCAATACGGCTTTTGGTGGAGTATCTTATTGCAATGACACAAACCCATGTTTCGTCGGAACTGCAGTGTCAAGCTACATTCATCCAGATTTTTACATTAACTTCCAGACTTTCGATACTACCTGCTTCCTCTTCTCTTTGAGCATCACTCTTTTGCTTGTAAGCGGATTTCCTCTCCATAAACGAGTGCTTGTGTGGCTCTTAACAGTAGTCATGTGCCTCACACTCACATTCTTGACATTGACCTTCAATGAAGGTATAAAGATGGTAATACCCAAACGTGTTAATAATGAAGATCTTAGCAGTCCCGTGGTTATTGGTTCTGCAACATTGTTTTGGGTTCCAATGCTTGGACTGGTGGTTTTATACCACACTATTCGACTTCTCGTTTGGCTGGTCAAGAAGTTGTGGCGCCTCGTCTACCCCAAAAATAAGATGACGAGCAACAGCAACGCAAATCTACTCCAGACTCCCATAAACTCTCATGAGATCAGTTCGTACGTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Ank_2 Ank_3 Ank_4 PGG

Protein Analysis

498

Amino Acids

55.75

Weight (kDa)

8.72

Isoelectric Point (pI)

40.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 16 - 105 1e-08 Ankyrin repeats (3 copies)
Ank_2 PF12796 86 - 177 1.9e-12 Ankyrin repeats (3 copies)
Ank_2 PF12796 120 - 212 1.4e-10 Ankyrin repeats (3 copies)
PGG PF13962 294 - 417 6.2e-17 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000404)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G13950 AT4G13266
fragaria_vesca FvH4_7g06240 FvH4_7g06250 FvH4_7g06270
malus_domestica MD12G1213300.v1.1 MD12G1213900.v1.1 MD12G1214100.v1.1 MD12G1214700.v1.1 MD12G1214800.v1.1
prunus_persica Prupe.2G107700_v2.0.a1 Prupe.3G142200_v2.0.a1 Prupe.3G154100_v2.0.a1 Prupe.3G154300_v2.0.a1 Prupe.3G154900_v2.0.a1 Prupe.3G155100_v2.0.a1
pyrus_communis pycom12g20010 pycom12g20080 pycom12g20090 pycom12g20100
rosa_chinensis RchiOBHm_Chr1g0341001 RchiOBHm_Chr1g0341021 RchiOBHm_Chr1g0341891 RchiOBHm_Chr1g0342341 RchiOBHm_Chr3g0490431
rosa_laevigata RLG00000022889 RLG00000029016 RLG00000029039 RLG00000029059 RLG00000029061 RLG00000029065 RLG00000029115 RLG00000029155 RLG00000033311 RLG00000033312
rosa_multiflora Rmu_sc0000404.1_g000006 Rmu_sc0001836.1_g000015 Rmu_sc0001836.1_g000050 Rmu_sc0002200.1_g000003 Rmu_sc0003862.1_g000020 Rmu_sc0005193.1_g000001 Rmu_sc0005193.1_g000002 Rmu_sc0008453.1_g000008 Rmu_sc0008453.1_g000009 Rmu_sc0008453.1_g000010 Rmu_sc0008862.1_g000001 Rmu_sc0011195.1_g000003 Rmu_sc0014077.1_g000001
rosa_roxburghii Rroxscaffold_4G00311670 Rroxscaffold_4G00311730 Rroxscaffold_4G00311750 Rroxscaffold_4G00312290 Rroxscaffold_6G00393430
rosa_rugosa Rorug01G0153800.1 Rorug01G0153900.1 Rorug01G0160100.1 Rorug03G0243800
rosa_samantha Rh1AG166400 Rh1AG168200 Rh1AG174100 Rh1AG174700 Rh1AG179000 Rh1BG132600 Rh1BG136500 Rh1BG142200 Rh1BG142800 Rh1BG143200 Rh1BG146200 Rh1BG147000 Rh1BG147100 Rh1CG154800 Rh1CG161900 Rh1CG162700 Rh1CG166000 Rh1DG167500 Rh1DG169900 Rh1DG174000 Rh1DG174400 Rh1DG174700 Rh1DG174800 Rh1DG178200 Rh1DG179000 Rh1DG179100 Rh3AG292800 Rh3BG329600 Rh3CG326900 Rh3DG326200 Rh5BG218300 Rh7CG326800 Rh7DG307100
rosa_wichuraiana Rw0G006190 Rw0G007830 Rw0G009970 Rw0G009980 Rw1G013880 Rw1G014000 Rw1G014500 Rw1G014560 Rw1G014920 Rw3G025950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 543
Acc16I TGCGCA 1 cut(s) 412
Acc36I ACCTGC 1 cut(s) 1121
AccB1I GGYRCC 1 cut(s) 1401
AccB7I CCANNNNNTGG 2 cut(s) 968, 1340
AccBSI CCGCTC 2 cut(s) 154, 256
AccI GTMKAC 1 cut(s) 1410
AccII CGCG 2 cut(s) 226, 900
AciI CCGC 6 cut(s) 152, 226, 254, 369, 900, 1155
AclWI GGATC 2 cut(s) 88, 345
AcoI YGGCCR 1 cut(s) 175
AcsI RAATTY 1 cut(s) 726
AcuI CTGAAG 2 cut(s) 45, 294
AcyI GRCGYC 3 cut(s) 247, 540, 1402
AdeI CACNNNGTG 1 cut(s) 968
AfaI GTAC 5 cut(s) 648, 669, 798, 844, 1490
AfiI CCNNNNNNNGG 2 cut(s) 968, 1340
AflIII ACRYGT 1 cut(s) 1270
AgsI TTSAA 3 cut(s) 502, 731, 1240
AhlI ACTAGT 1 cut(s) 793
AjnI CCWGG 1 cut(s) 964
AleI CACNNNNGTG 1 cut(s) 471
Alw21I GWGCWC 1 cut(s) 46
Alw26I GTCTC 7 cut(s) 211, 238, 281, 447, 519, 531, 608
AlwI GGATC 2 cut(s) 88, 345
Ama87I CYCGRG 1 cut(s) 214
AoxI GGCC 2 cut(s) 175, 277
ApeKI GCWGC 2 cut(s) 56, 950
ApoI RAATTY 1 cut(s) 726
ArsI GACNNNNNNTTYG 2 cut(s) 1362, 1394
Asp700I GAANNNNTTC 1 cut(s) 300
AspLEI GCGC 3 cut(s) 226, 413, 1404
AsuHPI GGTGA 2 cut(s) 11, 241
AvaI CYCGRG 1 cut(s) 214
BanI GGYRCC 1 cut(s) 1401
BarI GAAGNNNNNNTAC 2 cut(s) 826, 858
BbsI GAAGAC 1 cut(s) 33
Bbv12I GWGCWC 1 cut(s) 46
BbvCI CCTCAGC 1 cut(s) 387
BbvI GCAGC 2 cut(s) 68, 937
BccI CCATC 3 cut(s) 338, 560, 1249
BceAI ACGGC 1 cut(s) 1014
BciT130I CCWGG 1 cut(s) 966
BcoDI GTCTC 7 cut(s) 211, 238, 281, 447, 519, 531, 608
BcuI ACTAGT 1 cut(s) 793
BfaI CTAG 2 cut(s) 552, 794
BfmI CTRYAG 1 cut(s) 1053
BfoI RGCGCY 1 cut(s) 1405
BfuAI ACCTGC 1 cut(s) 1121
BglII AGATCT 1 cut(s) 1285
BisI GCNGC 4 cut(s) 57, 369, 901, 951
BlpI GCTNAGC 1 cut(s) 399
BlsI GCNGC 4 cut(s) 58, 370, 902, 952
Bme1390I CCNGG 1 cut(s) 966
BmeT110I CYCGRG 1 cut(s) 214
BmiI GGNNCC 3 cut(s) 70, 1332, 1403
BmrFI CCNGG 1 cut(s) 966
BmsI GCATC 3 cut(s) 275, 588, 1143
BpiI GAAGAC 1 cut(s) 33
BplI GAGNNNNNCTC 6 cut(s) 235, 267, 528, 560, 1123, 1155
BpmI CTGGAG 1 cut(s) 1439
Bpu10I CCTNAGC 2 cut(s) 387, 602
Bpu1102I GCTNAGC 1 cut(s) 399
BpuEI CTTGAG 2 cut(s) 262, 605
BsaHI GRCGYC 3 cut(s) 247, 540, 1402
BsaI GGTCTC 1 cut(s) 608
BsaJI CCNNGG 1 cut(s) 1299
BsaXI ACNNNNNCTCC 2 cut(s) 444, 474
Bsc4I CCNNNNNNNGG 2 cut(s) 968, 1340
Bse1I ACTGG 1 cut(s) 1350
Bse3DI GCAATG 2 cut(s) 378, 1030
BseBI CCWGG 1 cut(s) 966
BseDI CCNNGG 1 cut(s) 1299
BseGI GGATG 2 cut(s) 111, 1072
BseLI CCNNNNNNNGG 2 cut(s) 968, 1340
BseMI GCAATG 2 cut(s) 378, 1030
BseMII CTCAG 4 cut(s) 177, 378, 413, 559
BseNI ACTGG 1 cut(s) 1350
BseRI GAGGAG 2 cut(s) 248, 465
BseXI GCAGC 2 cut(s) 68, 937
Bsh1236I CGCG 2 cut(s) 226, 900
Bsh1285I CGRYCG 1 cut(s) 294
BshFI GGCC 2 cut(s) 177, 279
BshNI GGYRCC 1 cut(s) 1401
BsiEI CGRYCG 1 cut(s) 294
BsiHKAI GWGCWC 1 cut(s) 46
BsiHKCI CYCGRG 1 cut(s) 214
BsiWI CGTACG 1 cut(s) 1488
BslFI GGGAC 2 cut(s) 248, 1281
BslI CCNNNNNNNGG 2 cut(s) 968, 1340
BsmAI GTCTC 7 cut(s) 211, 238, 281, 447, 519, 531, 608
BsmBI CGTCTC 3 cut(s) 238, 281, 531
BsmFI GGGAC 2 cut(s) 248, 1281
BsmI GAATGC 1 cut(s) 500
BsnI GGCC 2 cut(s) 177, 279
Bso31I GGTCTC 1 cut(s) 608
BsoBI CYCGRG 1 cut(s) 214
Bsp1286I GDGCHC 1 cut(s) 46
Bsp1407I TGTACA 1 cut(s) 667
Bsp143I GATC 6 cut(s) 16, 93, 337, 927, 1285, 1479
Bsp1720I GCTNAGC 1 cut(s) 399
BspACI CCGC 6 cut(s) 152, 226, 254, 369, 900, 1155
BspANI GGCC 2 cut(s) 177, 279
BspCNI CTCAG 4 cut(s) 176, 379, 412, 558
BspFNI CGCG 2 cut(s) 226, 900
BspHI TCATGA 1 cut(s) 1474
BspLI GGNNCC 3 cut(s) 70, 1332, 1403
BspMAI CTGCAG 1 cut(s) 1057
BspMI ACCTGC 1 cut(s) 1121
BspPI GGATC 2 cut(s) 88, 345
BspQI GCTCTTC 2 cut(s) 204, 306
BspT107I GGYRCC 1 cut(s) 1401
BspTNI GGTCTC 1 cut(s) 608
BsrBI CCGCTC 2 cut(s) 154, 256
BsrDI GCAATG 2 cut(s) 378, 1030
BsrGI TGTACA 1 cut(s) 667
BsrI ACTGG 1 cut(s) 1350
BssECI CCNNGG 1 cut(s) 1299
BssMI GATC 6 cut(s) 16, 93, 337, 927, 1285, 1479
BssNI GRCGYC 3 cut(s) 247, 540, 1402
Bst2UI CCWGG 1 cut(s) 966
Bst4CI ACNGT 4 cut(s) 292, 460, 651, 1198
Bst6I CTCTTC 5 cut(s) 204, 306, 363, 885, 1127
BstACI GRCGYC 3 cut(s) 247, 540, 1402
BstAPI GCANNNNNTGC 1 cut(s) 62
BstAUI TGTACA 1 cut(s) 667
BstC8I GCNNGC 3 cut(s) 67, 325, 905
BstDEI CTNAG 6 cut(s) 163, 387, 399, 545, 602, 1289
BstDSI CCRYGG 1 cut(s) 1299
BstF5I GGATG 2 cut(s) 111, 1072
BstFNI CGCG 2 cut(s) 226, 900
BstH2I RGCGCY 1 cut(s) 1405
BstHHI GCGC 3 cut(s) 226, 413, 1404
BstKTI GATC 6 cut(s) 19, 96, 340, 930, 1288, 1482
BstMAI GTCTC 7 cut(s) 211, 238, 281, 447, 519, 531, 608
BstMBI GATC 6 cut(s) 16, 93, 337, 927, 1285, 1479
BstMCI CGRYCG 1 cut(s) 294
BstMWI GCNNNNNNNGC 2 cut(s) 62, 1186
BstNI CCWGG 1 cut(s) 966
BstNSI RCATGY 2 cut(s) 386, 907
BstSCI CCNGG 1 cut(s) 964
BstSFI CTRYAG 1 cut(s) 1053
BstUI CGCG 2 cut(s) 226, 900
BstV1I GCAGC 2 cut(s) 68, 937
BstV2I GAAGAC 1 cut(s) 33
BstX2I RGATCY 1 cut(s) 1285
BstYI RGATCY 1 cut(s) 1285
BsuRI GGCC 2 cut(s) 177, 279
BtgI CCRYGG 1 cut(s) 1299
BtsCI GGATG 2 cut(s) 111, 1072
BtsI GCAGTG 1 cut(s) 1062
BtsIMutI CAGTG 2 cut(s) 553, 1062
BveI ACCTGC 1 cut(s) 1121
Cac8I GCNNGC 3 cut(s) 67, 325, 905
CciI TCATGA 1 cut(s) 1474
CfoI GCGC 3 cut(s) 226, 413, 1404
CseI GACGC 2 cut(s) 255, 329
CsiI ACCWGGT 1 cut(s) 964
Csp6I GTAC 5 cut(s) 647, 668, 797, 843, 1489
CviAII CATG 8 cut(s) 383, 671, 904, 910, 925, 1038, 1204, 1475
CviQI GTAC 5 cut(s) 647, 668, 797, 843, 1489
DdeI CTNAG 6 cut(s) 163, 387, 399, 545, 602, 1289
DinI GGCGCC 1 cut(s) 1403
DpnI GATC 6 cut(s) 18, 95, 339, 929, 1287, 1481
DpnII GATC 6 cut(s) 16, 93, 337, 927, 1285, 1479
DraIII CACNNNGTG 1 cut(s) 968
EaeI YGGCCR 1 cut(s) 175
Eam1104I CTCTTC 5 cut(s) 204, 306, 363, 885, 1127
EarI CTCTTC 5 cut(s) 204, 306, 363, 885, 1127
Eco31I GGTCTC 1 cut(s) 608
Eco57I CTGAAG 2 cut(s) 45, 294
Eco88I CYCGRG 1 cut(s) 214
EcoRII CCWGG 1 cut(s) 964
EgeI GGCGCC 1 cut(s) 1403
EheI GGCGCC 1 cut(s) 1403
Esp3I CGTCTC 3 cut(s) 238, 281, 531
FaeI CATG 8 cut(s) 386, 674, 907, 913, 928, 1041, 1207, 1478
FalI AAGNNNNNCTT 2 cut(s) 186, 218
FaqI GGGAC 2 cut(s) 248, 1281
FatI CATG 8 cut(s) 382, 670, 903, 909, 924, 1037, 1203, 1474
FauI CCCGC 1 cut(s) 219
FblI GTMKAC 1 cut(s) 1410
Fnu4HI GCNGC 4 cut(s) 57, 369, 901, 951
FokI GGATG 2 cut(s) 98, 1059
Fsp4HI GCNGC 4 cut(s) 57, 369, 901, 951
FspBI CTAG 2 cut(s) 552, 794
FspI TGCGCA 1 cut(s) 412
GlaI GCGC 3 cut(s) 225, 412, 1403
GluI GCNGC 4 cut(s) 57, 369, 901, 951
GsuI CTGGAG 1 cut(s) 1439
HaeII RGCGCY 1 cut(s) 1405
HaeIII GGCC 2 cut(s) 177, 279
HgaI GACGC 2 cut(s) 255, 329
HhaI GCGC 3 cut(s) 226, 413, 1404
Hin1I GRCGYC 3 cut(s) 247, 540, 1402
Hin1II CATG 8 cut(s) 386, 674, 907, 913, 928, 1041, 1207, 1478
Hin6I GCGC 3 cut(s) 224, 411, 1402
HinP1I GCGC 3 cut(s) 224, 411, 1402
HindIII AAGCTT 1 cut(s) 718
HinfI GANTC 4 cut(s) 236, 422, 746, 1459
HphI GGTGA 2 cut(s) 11, 241
Hpy166II GTNNAC 1 cut(s) 1411
Hpy188I TCNGA 3 cut(s) 306, 655, 1049
Hpy8I GTNNAC 1 cut(s) 1411
Hpy99I CGWCG 2 cut(s) 323, 1049
HpyAV CCTTC 6 cut(s) 269, 670, 815, 828, 1238, 1246
HpyCH4III ACNGT 4 cut(s) 292, 460, 651, 1198
HpyCH4IV ACGT 3 cut(s) 540, 1270, 1491
HpyCH4V TGCA 5 cut(s) 65, 953, 1023, 1055, 1316
HpyF10VI GCNNNNNNNGC 2 cut(s) 62, 1186
HpyF3I CTNAG 6 cut(s) 163, 387, 399, 545, 602, 1289
HpySE526I ACGT 3 cut(s) 540, 1270, 1491
Hsp92I GRCGYC 3 cut(s) 247, 540, 1402
Hsp92II CATG 8 cut(s) 386, 674, 907, 913, 928, 1041, 1207, 1478
HspAI GCGC 3 cut(s) 224, 411, 1402
KasI GGCGCC 1 cut(s) 1401
Kzo9I GATC 6 cut(s) 16, 93, 337, 927, 1285, 1479
LguI GCTCTTC 2 cut(s) 204, 306
LmnI GCTCC 3 cut(s) 74, 159, 261
Lsp1109I GCAGC 2 cut(s) 68, 937
LweI GCATC 3 cut(s) 275, 588, 1143
MabI ACCWGGT 1 cut(s) 964
MaeI CTAG 2 cut(s) 552, 794
MaeII ACGT 3 cut(s) 540, 1270, 1491
MaeIII GTNAC 2 cut(s) 427, 475
MalI GATC 6 cut(s) 18, 95, 339, 929, 1287, 1481
MbiI CCGCTC 2 cut(s) 154, 256
MboI GATC 6 cut(s) 16, 93, 337, 927, 1285, 1479
MboII GAAGA 8 cut(s) 26, 38, 191, 293, 350, 902, 1114, 1295
MflI RGATCY 1 cut(s) 1285
MhlI GDGCHC 1 cut(s) 46
MluCI AATT 5 cut(s) 488, 609, 726, 880, 954
Mly113I GGCGCC 1 cut(s) 1402
MlyI GAGTC 2 cut(s) 230, 1453
MmeI TCCRAC 1 cut(s) 1027
MroXI GAANNNNTTC 1 cut(s) 300
MseI TTAA 6 cut(s) 434, 683, 957, 1089, 1193, 1275
MslI CAYNNNNRTG 3 cut(s) 471, 908, 914
MspA1I CMGCKG 1 cut(s) 403
MspR9I CCNGG 1 cut(s) 966
Mva1269I GAATGC 1 cut(s) 500
MvaI CCWGG 1 cut(s) 966
MvnI CGCG 2 cut(s) 226, 900
MwoI GCNNNNNNNGC 2 cut(s) 62, 1186
NarI GGCGCC 1 cut(s) 1402
NdeII GATC 6 cut(s) 16, 93, 337, 927, 1285, 1479
NlaIII CATG 8 cut(s) 386, 674, 907, 913, 928, 1041, 1207, 1478
NlaIV GGNNCC 3 cut(s) 70, 1332, 1403
NmeAIII GCCGAG 1 cut(s) 153
NmuCI GTSAC 1 cut(s) 427
NsbI TGCGCA 1 cut(s) 412
NspI RCATGY 2 cut(s) 386, 907
OliI CACNNNNGTG 1 cut(s) 471
PaeI GCATGC 1 cut(s) 907
PaeR7I CTCGAG 1 cut(s) 214
PagI TCATGA 1 cut(s) 1474
PciSI GCTCTTC 2 cut(s) 204, 306
PctI GAATGC 1 cut(s) 500
PdmI GAANNNNTTC 1 cut(s) 300
PfeI GAWTC 2 cut(s) 422, 746
Pfl23II CGTACG 1 cut(s) 1488
PflMI CCANNNNNTGG 2 cut(s) 968, 1340
PkrI GCNGC 4 cut(s) 58, 370, 902, 952
PleI GAGTC 2 cut(s) 230, 1453
PluTI GGCGCC 1 cut(s) 1405
PpsI GAGTC 2 cut(s) 230, 1453
Psp6I CCWGG 1 cut(s) 964
PspGI CCWGG 1 cut(s) 964
PspLI CGTACG 1 cut(s) 1488
PspN4I GGNNCC 3 cut(s) 70, 1332, 1403
PstI CTGCAG 1 cut(s) 1057
PsuI RGATCY 1 cut(s) 1285
PvuII CAGCTG 1 cut(s) 403
RsaI GTAC 5 cut(s) 648, 669, 798, 844, 1490
RsaNI GTAC 5 cut(s) 647, 668, 797, 843, 1489
RseI CAYNNNNRTG 3 cut(s) 471, 908, 914
SapI GCTCTTC 2 cut(s) 204, 306
SaqAI TTAA 6 cut(s) 434, 683, 957, 1089, 1193, 1275
SatI GCNGC 4 cut(s) 57, 369, 901, 951
Sau3AI GATC 6 cut(s) 16, 93, 337, 927, 1285, 1479
SchI GAGTC 2 cut(s) 230, 1453
ScrFI CCNGG 1 cut(s) 966
SduI GDGCHC 1 cut(s) 46
SexAI ACCWGGT 1 cut(s) 964
SfaNI GCATC 3 cut(s) 275, 588, 1143
SfcI CTRYAG 1 cut(s) 1053
SfoI GGCGCC 1 cut(s) 1403
Sfr274I CTCGAG 1 cut(s) 214
SlaI CTCGAG 1 cut(s) 214
SmiMI CAYNNNNRTG 3 cut(s) 471, 908, 914
SmlI CTYRAG 3 cut(s) 214, 241, 584
SmoI CTYRAG 3 cut(s) 214, 241, 584
SpeI ACTAGT 1 cut(s) 793
SphI GCATGC 1 cut(s) 907
Sse9I AATT 5 cut(s) 488, 609, 726, 880, 954
SsiI CCGC 6 cut(s) 152, 226, 254, 369, 900, 1155
SspDI GGCGCC 1 cut(s) 1401
SspMI CTAG 2 cut(s) 552, 794
StyD4I CCNGG 1 cut(s) 964
TaaI ACNGT 4 cut(s) 292, 460, 651, 1198
TaiI ACGT 3 cut(s) 543, 1273, 1494
TaqI TCGA 4 cut(s) 215, 294, 1104, 1369
TaqII GACCGA 1 cut(s) 415
TasI AATT 5 cut(s) 488, 609, 726, 880, 954
TatI WGTACW 1 cut(s) 667
TauI GCSGC 2 cut(s) 371, 903
TfiI GAWTC 2 cut(s) 422, 746
Tru1I TTAA 6 cut(s) 434, 683, 957, 1089, 1193, 1275
Tru9I TTAA 6 cut(s) 434, 683, 957, 1089, 1193, 1275
TscAI CASTG 2 cut(s) 553, 1062
TseFI GTSAC 1 cut(s) 427
TseI GCWGC 2 cut(s) 56, 950
Tsp45I GTSAC 1 cut(s) 427
TspDTI ATGAA 5 cut(s) 197, 789, 1061, 1257, 1296
TspGWI ACGGA 1 cut(s) 61
TspRI CASTG 2 cut(s) 553, 1062
Van91I CCANNNNNTGG 2 cut(s) 968, 1340
XapI RAATTY 1 cut(s) 726
XceI RCATGY 2 cut(s) 386, 907
XcmI CCANNNNNNNNNTGG 1 cut(s) 972
XhoI CTCGAG 1 cut(s) 214
XmiI GTMKAC 1 cut(s) 1410
XmnI GAANNNNTTC 1 cut(s) 300
XspI CTAG 2 cut(s) 552, 794
ZraI GACGTC 1 cut(s) 541
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.